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Started by an SCM change Running as SYSTEM Building remotely on Debian_Linux-VM (debian linux) in workspace /home/jenkins/workspace/Debian_Linux-Ice-Ocean Updating https://issm.ess.uci.edu/svn/issm/issm/trunk-jpl@HEAD at revision HEAD Using sole credentials ISSM SVN repositories - Mathieu Morlighem in realm ‘<https://issm.ess.uci.edu:443> Your s383 passwd’ AU test/Archives/Archive359.arch A test/NightlyRun/test359.m A test/NightlyRun/test359.py At revision 28232 WARNING: clock of the subversion server appears to be out of sync. This can result in inconsistent check out behavior. Using sole credentials ISSM SVN repositories - Mathieu Morlighem in realm ‘<https://issm.ess.uci.edu:443> Your s383 passwd’ [Debian_Linux-Ice-Ocean] $ /bin/bash /tmp/jenkins16481982875687446588.sh Cleaning up execution directory ====================================================== Determining Installation type ====================================================== Previous revision number: 28231 Current revision number: 28232 List of updated files /issm/trunk-jpl/test/Archives/Archive359.arch /issm/trunk-jpl/test/NightlyRun/test359.m /issm/trunk-jpl/test/NightlyRun/test359.py Determining installation type -- checking for changed externalpackages... no -- checking for reconfiguration... no -- checking for recompilation... no Recording current svn version: 28232 ====================================================== Skipping autotools ====================================================== ====================================================== Skipping cmake ====================================================== ====================================================== Skipping petsc ====================================================== ====================================================== Skipping triangle ====================================================== ====================================================== Skipping m1qn3 ====================================================== ====================================================== Skipping semic ====================================================== ====================================================== Skipping shell2junit ====================================================== Skipping ISSM compilation +++ Removing old junit reports from: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/nightlylog/results +++ Running case: MATLAB-4001 +++ working dir: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/nightlylog [41;37m step #1: Parameters [0m saving data in: Models/IceOcean.Parameters [41;37m step #2: Bathymetry [0m saving data in: Models/IceOcean.Bathymetry [41;37m step #3: IceSheetGeometry [0m saving data in: Models/IceOcean.IceSheetGeometry [41;37m step #4: GetMITgcm [0m --2024-04-28 14:28:50-- https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz Resolving github.com (github.com)... 140.82.116.3 Connecting to github.com (github.com)|140.82.116.3|:443... connected. HTTP request sent, awaiting response... 302 Found Location: https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i [following] --2024-04-28 14:28:50-- https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i Resolving codeload.github.com (codeload.github.com)... 140.82.116.9 Connecting to codeload.github.com (codeload.github.com)|140.82.116.9|:443... connected. 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MITgcm-checkpoint68i/model/src/dynamics.F MITgcm-checkpoint68i/model/src/external_fields_load.F MITgcm-checkpoint68i/model/src/external_forcing.F MITgcm-checkpoint68i/model/src/external_forcing_surf.F MITgcm-checkpoint68i/model/src/find_alpha.F MITgcm-checkpoint68i/model/src/find_hyd_press_1d.F MITgcm-checkpoint68i/model/src/find_rho.F MITgcm-checkpoint68i/model/src/forcing_surf_relax.F MITgcm-checkpoint68i/model/src/forward_step.F MITgcm-checkpoint68i/model/src/freesurf_rescale_g.F MITgcm-checkpoint68i/model/src/freeze_surface.F MITgcm-checkpoint68i/model/src/grad_sigma.F MITgcm-checkpoint68i/model/src/gsw_teos10.F MITgcm-checkpoint68i/model/src/impldiff.F MITgcm-checkpoint68i/model/src/ini_cartesian_grid.F MITgcm-checkpoint68i/model/src/ini_cg2d.F MITgcm-checkpoint68i/model/src/ini_cg3d.F MITgcm-checkpoint68i/model/src/ini_cori.F MITgcm-checkpoint68i/model/src/ini_curvilinear_grid.F MITgcm-checkpoint68i/model/src/ini_cylinder_grid.F MITgcm-checkpoint68i/model/src/ini_depths.F MITgcm-checkpoint68i/model/src/ini_dynvars.F MITgcm-checkpoint68i/model/src/ini_eos.F MITgcm-checkpoint68i/model/src/ini_ffields.F MITgcm-checkpoint68i/model/src/ini_fields.F MITgcm-checkpoint68i/model/src/ini_forcing.F MITgcm-checkpoint68i/model/src/ini_global_domain.F MITgcm-checkpoint68i/model/src/ini_grid.F MITgcm-checkpoint68i/model/src/ini_linear_phisurf.F MITgcm-checkpoint68i/model/src/ini_local_grid.F MITgcm-checkpoint68i/model/src/ini_masks_etc.F MITgcm-checkpoint68i/model/src/ini_mixing.F MITgcm-checkpoint68i/model/src/ini_mnc_vars.F MITgcm-checkpoint68i/model/src/ini_model_io.F MITgcm-checkpoint68i/model/src/ini_nh_fields.F MITgcm-checkpoint68i/model/src/ini_nh_vars.F MITgcm-checkpoint68i/model/src/ini_nlfs_vars.F MITgcm-checkpoint68i/model/src/ini_p_ground.F MITgcm-checkpoint68i/model/src/ini_parms.F MITgcm-checkpoint68i/model/src/ini_pressure.F MITgcm-checkpoint68i/model/src/ini_psurf.F MITgcm-checkpoint68i/model/src/ini_salt.F MITgcm-checkpoint68i/model/src/ini_sigma_hfac.F MITgcm-checkpoint68i/model/src/ini_spherical_polar_grid.F MITgcm-checkpoint68i/model/src/ini_theta.F MITgcm-checkpoint68i/model/src/ini_vel.F MITgcm-checkpoint68i/model/src/ini_vertical_grid.F MITgcm-checkpoint68i/model/src/initialise_fixed.F MITgcm-checkpoint68i/model/src/initialise_varia.F MITgcm-checkpoint68i/model/src/integr_continuity.F MITgcm-checkpoint68i/model/src/integrate_for_w.F MITgcm-checkpoint68i/model/src/load_fields_driver.F MITgcm-checkpoint68i/model/src/load_grid_spacing.F MITgcm-checkpoint68i/model/src/load_ref_files.F MITgcm-checkpoint68i/model/src/main_do_loop.F MITgcm-checkpoint68i/model/src/model_ad_diff.list MITgcm-checkpoint68i/model/src/momentum_correction_step.F MITgcm-checkpoint68i/model/src/packages_boot.F MITgcm-checkpoint68i/model/src/packages_check.F MITgcm-checkpoint68i/model/src/packages_error_msg.F MITgcm-checkpoint68i/model/src/packages_init_fixed.F MITgcm-checkpoint68i/model/src/packages_init_variables.F MITgcm-checkpoint68i/model/src/packages_print_msg.F MITgcm-checkpoint68i/model/src/packages_readparms.F MITgcm-checkpoint68i/model/src/packages_unused_msg.F MITgcm-checkpoint68i/model/src/packages_write_pickup.F MITgcm-checkpoint68i/model/src/plot_field.F MITgcm-checkpoint68i/model/src/port_rand.F MITgcm-checkpoint68i/model/src/post_cg3d.F MITgcm-checkpoint68i/model/src/pre_cg3d.F MITgcm-checkpoint68i/model/src/pressure_for_eos.F MITgcm-checkpoint68i/model/src/read_pickup.F MITgcm-checkpoint68i/model/src/remove_mean.F MITgcm-checkpoint68i/model/src/reset_nlfs_vars.F MITgcm-checkpoint68i/model/src/rotate_spherical_polar_grid.F MITgcm-checkpoint68i/model/src/rotate_uv2en.F MITgcm-checkpoint68i/model/src/salt_integrate.F MITgcm-checkpoint68i/model/src/seawater.F MITgcm-checkpoint68i/model/src/set_defaults.F MITgcm-checkpoint68i/model/src/set_grid_factors.F MITgcm-checkpoint68i/model/src/set_parms.F MITgcm-checkpoint68i/model/src/set_ref_state.F MITgcm-checkpoint68i/model/src/solve_for_pressure.F MITgcm-checkpoint68i/model/src/solve_pentadiagonal.F MITgcm-checkpoint68i/model/src/solve_tridiagonal.F MITgcm-checkpoint68i/model/src/solve_uv_tridiago.F MITgcm-checkpoint68i/model/src/state_summary.F MITgcm-checkpoint68i/model/src/swfrac.F MITgcm-checkpoint68i/model/src/taueddy_init_varia.F MITgcm-checkpoint68i/model/src/taueddy_tendency_apply.F MITgcm-checkpoint68i/model/src/temp_integrate.F MITgcm-checkpoint68i/model/src/the_main_loop.F MITgcm-checkpoint68i/model/src/the_model_main.F MITgcm-checkpoint68i/model/src/thermodynamics.F MITgcm-checkpoint68i/model/src/timestep.F MITgcm-checkpoint68i/model/src/timestep_tracer.F MITgcm-checkpoint68i/model/src/timestep_wvel.F MITgcm-checkpoint68i/model/src/tracers_correction_step.F MITgcm-checkpoint68i/model/src/tracers_iigw_correction.F MITgcm-checkpoint68i/model/src/turnoff_model_io.F MITgcm-checkpoint68i/model/src/update_cg2d.F MITgcm-checkpoint68i/model/src/update_etah.F MITgcm-checkpoint68i/model/src/update_etaws.F MITgcm-checkpoint68i/model/src/update_masks_etc.F MITgcm-checkpoint68i/model/src/update_r_star.F MITgcm-checkpoint68i/model/src/update_sigma.F MITgcm-checkpoint68i/model/src/update_surf_dr.F MITgcm-checkpoint68i/model/src/write_grid.F MITgcm-checkpoint68i/model/src/write_pickup.F MITgcm-checkpoint68i/model/src/write_state.F MITgcm-checkpoint68i/optim/ MITgcm-checkpoint68i/optim/Makefile MITgcm-checkpoint68i/optim/Makefile_macosx MITgcm-checkpoint68i/optim/README.md MITgcm-checkpoint68i/optim/blas1.h MITgcm-checkpoint68i/optim/data.ctrl MITgcm-checkpoint68i/optim/data.ecco MITgcm-checkpoint68i/optim/data.optim MITgcm-checkpoint68i/optim/flowchart_optim.txt MITgcm-checkpoint68i/optim/minimization.h MITgcm-checkpoint68i/optim/optim.h MITgcm-checkpoint68i/optim/optim_initmod.F MITgcm-checkpoint68i/optim/optim_main.F MITgcm-checkpoint68i/optim/optim_numbmod.F MITgcm-checkpoint68i/optim/optim_readdata.F MITgcm-checkpoint68i/optim/optim_sub.F MITgcm-checkpoint68i/optim/optim_write_control.F MITgcm-checkpoint68i/optim/optim_writedata.F MITgcm-checkpoint68i/optim/simul.F MITgcm-checkpoint68i/optim/to_do.txt MITgcm-checkpoint68i/optim/utils.F MITgcm-checkpoint68i/optim/xerbla.F MITgcm-checkpoint68i/pkg/ MITgcm-checkpoint68i/pkg/admtlm/ MITgcm-checkpoint68i/pkg/admtlm/ADMTLM_OPTIONS.h MITgcm-checkpoint68i/pkg/admtlm/admtlm_bypassad.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_driver.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd2model.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_init_fixed.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_map.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_metric.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_model2dsvd.F MITgcm-checkpoint68i/pkg/admtlm/arpack_debug.h MITgcm-checkpoint68i/pkg/aim_v23/ MITgcm-checkpoint68i/pkg/aim_v23/AIM2DYN.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_CO2.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_FFIELDS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_GRID.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_OPTIONS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_PARAMS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_SIZE.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_TAVE.h MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2dyn.F MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2land.F MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2sioce.F MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics.F MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics_init.F MITgcm-checkpoint68i/pkg/aim_v23/aim_do_co2.F MITgcm-checkpoint68i/pkg/aim_v23/aim_do_physics.F MITgcm-checkpoint68i/pkg/aim_v23/aim_dyn2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_fields_load.F MITgcm-checkpoint68i/pkg/aim_v23/aim_initialise.F MITgcm-checkpoint68i/pkg/aim_v23/aim_land2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_land_impl.F MITgcm-checkpoint68i/pkg/aim_v23/aim_mnc_init.F MITgcm-checkpoint68i/pkg/aim_v23/aim_readparms.F MITgcm-checkpoint68i/pkg/aim_v23/aim_sice2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_sice_impl.F MITgcm-checkpoint68i/pkg/aim_v23/aim_surf_bc.F MITgcm-checkpoint68i/pkg/aim_v23/aim_tendency_apply.F MITgcm-checkpoint68i/pkg/aim_v23/aim_v23_description.tex MITgcm-checkpoint68i/pkg/aim_v23/aim_write_local.F MITgcm-checkpoint68i/pkg/aim_v23/aim_write_phys.F MITgcm-checkpoint68i/pkg/aim_v23/aim_write_tave.F MITgcm-checkpoint68i/pkg/aim_v23/com_cnvcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_forcing.h MITgcm-checkpoint68i/pkg/aim_v23/com_forcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_lsccon.h MITgcm-checkpoint68i/pkg/aim_v23/com_physcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_physvar.h MITgcm-checkpoint68i/pkg/aim_v23/com_radcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_radvar.h MITgcm-checkpoint68i/pkg/aim_v23/com_sflcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_vdicon.h MITgcm-checkpoint68i/pkg/aim_v23/phy_const.h MITgcm-checkpoint68i/pkg/aim_v23/phy_convmf.F MITgcm-checkpoint68i/pkg/aim_v23/phy_driver.F MITgcm-checkpoint68i/pkg/aim_v23/phy_inphys.F MITgcm-checkpoint68i/pkg/aim_v23/phy_lscond.F MITgcm-checkpoint68i/pkg/aim_v23/phy_radiat.F MITgcm-checkpoint68i/pkg/aim_v23/phy_shtorh.F MITgcm-checkpoint68i/pkg/aim_v23/phy_snow_precip.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_land.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_ocean.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_post.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_prep.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_sice.F MITgcm-checkpoint68i/pkg/aim_v23/phy_vdifsc.F MITgcm-checkpoint68i/pkg/atm2d/ MITgcm-checkpoint68i/pkg/atm2d/AGRID.h MITgcm-checkpoint68i/pkg/atm2d/ATM2D_OPTIONS.h MITgcm-checkpoint68i/pkg/atm2d/ATM2D_VARS.h MITgcm-checkpoint68i/pkg/atm2d/ATMSIZE.h MITgcm-checkpoint68i/pkg/atm2d/CPLIDS.h MITgcm-checkpoint68i/pkg/atm2d/DRIVER.h MITgcm-checkpoint68i/pkg/atm2d/OCNIDS.h MITgcm-checkpoint68i/pkg/atm2d/OCNSIZE.h MITgcm-checkpoint68i/pkg/atm2d/OCNVARS.h MITgcm-checkpoint68i/pkg/atm2d/accept_component_registrations.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_finish.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_init_fixed.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_init_vars.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_read_pickup.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_readparms.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_write_pickup.F MITgcm-checkpoint68i/pkg/atm2d/atm2ocn_main.F MITgcm-checkpoint68i/pkg/atm2d/calc_1dto2d.F MITgcm-checkpoint68i/pkg/atm2d/calc_fileload.F MITgcm-checkpoint68i/pkg/atm2d/calc_zonal_means.F MITgcm-checkpoint68i/pkg/atm2d/cpl_recv_ocn_fields.F MITgcm-checkpoint68i/pkg/atm2d/cpl_recv_ocn_ocnconfig.F MITgcm-checkpoint68i/pkg/atm2d/cpl_register_ocn.F MITgcm-checkpoint68i/pkg/atm2d/cpl_send_ocn_atmconfig.F MITgcm-checkpoint68i/pkg/atm2d/cpl_send_ocn_fields.F MITgcm-checkpoint68i/pkg/atm2d/ctrparam.h MITgcm-checkpoint68i/pkg/atm2d/exch_component_configs.F MITgcm-checkpoint68i/pkg/atm2d/fixed_flux_add.F MITgcm-checkpoint68i/pkg/atm2d/forward_step_atm2d.F MITgcm-checkpoint68i/pkg/atm2d/get_ocnvars.F MITgcm-checkpoint68i/pkg/atm2d/init_atm2d.F MITgcm-checkpoint68i/pkg/atm2d/init_sumvars.F MITgcm-checkpoint68i/pkg/atm2d/initialise.F MITgcm-checkpoint68i/pkg/atm2d/month_end_diags.F MITgcm-checkpoint68i/pkg/atm2d/norm_ocn_fluxes.F MITgcm-checkpoint68i/pkg/atm2d/pass_thsice_fluxes.F MITgcm-checkpoint68i/pkg/atm2d/put_ocnvars.F MITgcm-checkpoint68i/pkg/atm2d/read_atmos.F MITgcm-checkpoint68i/pkg/atm2d/relax_add.F MITgcm-checkpoint68i/pkg/atm2d/subtract_means.F MITgcm-checkpoint68i/pkg/atm2d/sum_ocn_fluxes.F MITgcm-checkpoint68i/pkg/atm2d/sum_thsice_out.F MITgcm-checkpoint68i/pkg/atm2d/sum_yr_end_diags.F MITgcm-checkpoint68i/pkg/atm2d/tave_end_diags.F MITgcm-checkpoint68i/pkg/atm2d/yr_end_diags.F MITgcm-checkpoint68i/pkg/atm_common/ MITgcm-checkpoint68i/pkg/atm_common/ATM_COMMON_OPTIONS.h MITgcm-checkpoint68i/pkg/atm_common/atm_diagnostics_init.F MITgcm-checkpoint68i/pkg/atm_compon_interf/ 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MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_my_data.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_surfflux.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_thsice.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_diagnostics_fill.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_diagnostics_init.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_exch_configs.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_export_import_data.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_import_cplparms.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_ini_vars.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_init.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_init_fixed.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_output.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_readparms.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_register.F MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_write_pickup.F MITgcm-checkpoint68i/pkg/atm_ocn_coupler/ 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MITgcm-checkpoint68i/pkg/compon_communic/compsend_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/generate_tag.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_init.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_tile_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_init.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_tile_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_all_check.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2dbl.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2int.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2real.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_dbl2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init1.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2a.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2b.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_initcomp.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_int2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_match_comp.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_real2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_sortranks.F MITgcm-checkpoint68i/pkg/cost/ MITgcm-checkpoint68i/pkg/cost/COST_OPTIONS.h MITgcm-checkpoint68i/pkg/cost/adcost.h MITgcm-checkpoint68i/pkg/cost/cost.h MITgcm-checkpoint68i/pkg/cost/cost_accumulate_mean.F MITgcm-checkpoint68i/pkg/cost/cost_ad.flow MITgcm-checkpoint68i/pkg/cost/cost_ad_diff.list MITgcm-checkpoint68i/pkg/cost/cost_atlantic_heat.F MITgcm-checkpoint68i/pkg/cost/cost_check.F MITgcm-checkpoint68i/pkg/cost/cost_dependent_init.F MITgcm-checkpoint68i/pkg/cost/cost_depth.F MITgcm-checkpoint68i/pkg/cost/cost_final.F MITgcm-checkpoint68i/pkg/cost/cost_final_restore.F MITgcm-checkpoint68i/pkg/cost/cost_final_store.F MITgcm-checkpoint68i/pkg/cost/cost_init_varia.F MITgcm-checkpoint68i/pkg/cost/cost_readparms.F MITgcm-checkpoint68i/pkg/cost/cost_state_final.F MITgcm-checkpoint68i/pkg/cost/cost_test.F MITgcm-checkpoint68i/pkg/cost/cost_tile.F MITgcm-checkpoint68i/pkg/cost/cost_tracer.F MITgcm-checkpoint68i/pkg/cost/cost_vector.F MITgcm-checkpoint68i/pkg/cost/g_cost.h MITgcm-checkpoint68i/pkg/ctrl/ MITgcm-checkpoint68i/pkg/ctrl/CTRL_FIELDS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_GENARR.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_OBCS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_OPTIONS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_SIZE.h MITgcm-checkpoint68i/pkg/ctrl/adctrl_bound.F MITgcm-checkpoint68i/pkg/ctrl/ctrl.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_diff.list MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.flow MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound_tl.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_check.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_driver.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_depth_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_description.tex MITgcm-checkpoint68i/pkg/ctrl/ctrl_dummy.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen_rec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_mask.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcse.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsn.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcss.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsw.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getrec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_hfacc_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_ctrlvar.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_obcs_variables.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_rec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_variables.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_wet.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_local_params.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_forcing.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_genarr.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_gentim2d.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_ecco.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_genarr.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gentim2d.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_pack.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_readparms.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_fname.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_smooth.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_summary.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_swapffields.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_toolbox.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_unpack.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_weights.h MITgcm-checkpoint68i/pkg/ctrl/optim.h MITgcm-checkpoint68i/pkg/ctrl/optim_readparms.F MITgcm-checkpoint68i/pkg/debug/ MITgcm-checkpoint68i/pkg/debug/DEBUG_OPTIONS.h MITgcm-checkpoint68i/pkg/debug/chksum_tiled.F MITgcm-checkpoint68i/pkg/debug/debug_ad.flow MITgcm-checkpoint68i/pkg/debug/debug_call.F MITgcm-checkpoint68i/pkg/debug/debug_cs_corner_uv.F MITgcm-checkpoint68i/pkg/debug/debug_enter.F MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rl.F MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rs.F MITgcm-checkpoint68i/pkg/debug/debug_leave.F MITgcm-checkpoint68i/pkg/debug/debug_msg.F MITgcm-checkpoint68i/pkg/debug/debug_stats_rl.F MITgcm-checkpoint68i/pkg/debug/debug_stats_rs.F MITgcm-checkpoint68i/pkg/debug/fill_in_corners_rl.F MITgcm-checkpoint68i/pkg/debug/write_fullarray_rl.F MITgcm-checkpoint68i/pkg/debug/write_fullarray_rs.F MITgcm-checkpoint68i/pkg/diagnostics/ MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_CALC.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_SIZE.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGSTATS_REGIONS.h MITgcm-checkpoint68i/pkg/diagnostics/DIAG_OPTIONS.h MITgcm-checkpoint68i/pkg/diagnostics/diag_calc_psivel.F MITgcm-checkpoint68i/pkg/diagnostics/diag_cg2d.F MITgcm-checkpoint68i/pkg/diagnostics/diag_vegtile_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad.flow MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad_diff.list MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_addtolist.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_calc_phivel.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_check.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_clear.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_field.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_rs.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_state.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fract_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ini_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_early.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_fixed.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_varia.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_p2p.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_vert.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_is_on.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_list_check.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_main_init.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_mnc_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_read_pickup.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_readparms.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill_rs.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_levels.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_pointers.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_setdiag.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_status_error.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_sum_levels.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_summary.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_switch_onoff.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_utils.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_adj.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_pickup.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ascii_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_clear.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_close_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_global.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ini_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_local.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_mnc_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_others_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_output.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_pointers.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_regions.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_setdiag.F MITgcm-checkpoint68i/pkg/dic/ MITgcm-checkpoint68i/pkg/dic/DIC_ATMOS.h MITgcm-checkpoint68i/pkg/dic/DIC_COST.h MITgcm-checkpoint68i/pkg/dic/DIC_CTRL.h MITgcm-checkpoint68i/pkg/dic/DIC_LOAD.h MITgcm-checkpoint68i/pkg/dic/DIC_OPTIONS.h MITgcm-checkpoint68i/pkg/dic/DIC_VARS.h MITgcm-checkpoint68i/pkg/dic/alk_surfforcing.F MITgcm-checkpoint68i/pkg/dic/bio_export.F MITgcm-checkpoint68i/pkg/dic/calcite_saturation.F MITgcm-checkpoint68i/pkg/dic/car_flux.F MITgcm-checkpoint68i/pkg/dic/car_flux_omega_top.F MITgcm-checkpoint68i/pkg/dic/carbon_chem.F MITgcm-checkpoint68i/pkg/dic/dic_ad.flow MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_diff.list MITgcm-checkpoint68i/pkg/dic/dic_atmos.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_diags.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_forcing.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_init.F MITgcm-checkpoint68i/pkg/dic/dic_cost.F MITgcm-checkpoint68i/pkg/dic/dic_diagnostics_init.F MITgcm-checkpoint68i/pkg/dic/dic_fields_load.F MITgcm-checkpoint68i/pkg/dic/dic_fields_update.F MITgcm-checkpoint68i/pkg/dic/dic_ini_atmos.F MITgcm-checkpoint68i/pkg/dic/dic_ini_forcing.F MITgcm-checkpoint68i/pkg/dic/dic_init_fixed.F MITgcm-checkpoint68i/pkg/dic/dic_init_varia.F MITgcm-checkpoint68i/pkg/dic/dic_mnc_init.F MITgcm-checkpoint68i/pkg/dic/dic_read_co2_pickup.F MITgcm-checkpoint68i/pkg/dic/dic_read_pickup.F MITgcm-checkpoint68i/pkg/dic/dic_readparms.F MITgcm-checkpoint68i/pkg/dic/dic_set_control.F MITgcm-checkpoint68i/pkg/dic/dic_solvesaphe.F MITgcm-checkpoint68i/pkg/dic/dic_store_fluxco2.F MITgcm-checkpoint68i/pkg/dic/dic_surfforcing.F MITgcm-checkpoint68i/pkg/dic/dic_surfforcing_init.F MITgcm-checkpoint68i/pkg/dic/dic_tr_register.F MITgcm-checkpoint68i/pkg/dic/dic_write_pickup.F MITgcm-checkpoint68i/pkg/dic/fe_chem.F MITgcm-checkpoint68i/pkg/dic/insol.F MITgcm-checkpoint68i/pkg/dic/o2_surfforcing.F MITgcm-checkpoint68i/pkg/dic/phos_flux.F MITgcm-checkpoint68i/pkg/down_slope/ MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_OPTIONS.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_PARAMS.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_SIZE.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_VARS.h MITgcm-checkpoint68i/pkg/down_slope/dwnslp_ad_diff.list MITgcm-checkpoint68i/pkg/down_slope/dwnslp_apply.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_flow.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_rho.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_diagnostics_init.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_fixed.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_varia.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_readparms.F MITgcm-checkpoint68i/pkg/ebm/ MITgcm-checkpoint68i/pkg/ebm/EBM.h MITgcm-checkpoint68i/pkg/ebm/EBM_OPTIONS.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_diff.list MITgcm-checkpoint68i/pkg/ebm/ebm_area_t.F MITgcm-checkpoint68i/pkg/ebm/ebm_atmosphere.F MITgcm-checkpoint68i/pkg/ebm/ebm_driver.F MITgcm-checkpoint68i/pkg/ebm/ebm_ini_vars.F MITgcm-checkpoint68i/pkg/ebm/ebm_load_climatology.F MITgcm-checkpoint68i/pkg/ebm/ebm_readparms.F MITgcm-checkpoint68i/pkg/ebm/ebm_wind_perturb.F MITgcm-checkpoint68i/pkg/ebm/ebm_zonalmean.F MITgcm-checkpoint68i/pkg/ecco/ MITgcm-checkpoint68i/pkg/ecco/ECCO.h MITgcm-checkpoint68i/pkg/ecco/ECCO_OPTIONS.h MITgcm-checkpoint68i/pkg/ecco/ECCO_SIZE.h MITgcm-checkpoint68i/pkg/ecco/cost_averagesfields.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesflags.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesgeneric.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesinit.F MITgcm-checkpoint68i/pkg/ecco/cost_bp_read.F MITgcm-checkpoint68i/pkg/ecco/cost_forcing.F MITgcm-checkpoint68i/pkg/ecco/cost_gencal.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_all.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_assignperiod.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_boxmean.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_bpv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_customize.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_glbmean.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_moc.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_seaicev4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sshv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sstv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_transp.F MITgcm-checkpoint68i/pkg/ecco/cost_generic.F MITgcm-checkpoint68i/pkg/ecco/cost_genread.F MITgcm-checkpoint68i/pkg/ecco/cost_hyd.F MITgcm-checkpoint68i/pkg/ecco/cost_internal_params.F MITgcm-checkpoint68i/pkg/ecco/cost_obcs.F MITgcm-checkpoint68i/pkg/ecco/cost_obcs_ageos.F MITgcm-checkpoint68i/pkg/ecco/cost_obcse.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsn.F MITgcm-checkpoint68i/pkg/ecco/cost_obcss.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsvol.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsw.F MITgcm-checkpoint68i/pkg/ecco/cost_sla_read.F MITgcm-checkpoint68i/pkg/ecco/cost_sla_read_yd.F MITgcm-checkpoint68i/pkg/ecco/cost_ssh.F MITgcm-checkpoint68i/pkg/ecco/ecco_ad.flow MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_diff.list MITgcm-checkpoint68i/pkg/ecco/ecco_check.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost.h MITgcm-checkpoint68i/pkg/ecco/ecco_cost_driver.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_final.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_barfiles.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_fixed.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_varia.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_summary.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_weights.F MITgcm-checkpoint68i/pkg/ecco/ecco_diagnostics_init.F MITgcm-checkpoint68i/pkg/ecco/ecco_init_fixed.F MITgcm-checkpoint68i/pkg/ecco/ecco_init_varia.F MITgcm-checkpoint68i/pkg/ecco/ecco_local_params.h MITgcm-checkpoint68i/pkg/ecco/ecco_phys.F MITgcm-checkpoint68i/pkg/ecco/ecco_readparms.F MITgcm-checkpoint68i/pkg/ecco/ecco_summary.F MITgcm-checkpoint68i/pkg/ecco/ecco_toolbox.F MITgcm-checkpoint68i/pkg/ecco/stergloh_output.F MITgcm-checkpoint68i/pkg/embed_files/ MITgcm-checkpoint68i/pkg/embed_files/EMBED_FILES_OPTIONS.h MITgcm-checkpoint68i/pkg/embed_files/README.txt MITgcm-checkpoint68i/pkg/embed_files/decode_files.c MITgcm-checkpoint68i/pkg/embed_files/embed_files_init.F MITgcm-checkpoint68i/pkg/exch2/ MITgcm-checkpoint68i/pkg/exch2/Makefile MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_BUFFER.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_PARAMS.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_SIZE.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_TOPOLOGY.h MITgcm-checkpoint68i/pkg/exch2/W2_OPTIONS.h MITgcm-checkpoint68i/pkg/exch2/exch2.flow MITgcm-checkpoint68i/pkg/exch2/exch2_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_diff.list MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_check_depths.F MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_get_scal_bounds.F MITgcm-checkpoint68i/pkg/exch2/exch2_get_uv_bounds.F MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube_ad.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube_ad.template MITgcm-checkpoint68i/pkg/exch2/exch2_s3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_sm_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_agrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_bgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_cgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_dgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_z_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/w2_cumulsum_z_tile.F MITgcm-checkpoint68i/pkg/exch2/w2_e2setup.F MITgcm-checkpoint68i/pkg/exch2/w2_eeboot.F MITgcm-checkpoint68i/pkg/exch2/w2_map_procs.F MITgcm-checkpoint68i/pkg/exch2/w2_print_comm_sequence.F MITgcm-checkpoint68i/pkg/exch2/w2_print_e2setup.F MITgcm-checkpoint68i/pkg/exch2/w2_readparms.F MITgcm-checkpoint68i/pkg/exch2/w2_set_cs6_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_f2f_index.F MITgcm-checkpoint68i/pkg/exch2/w2_set_gen_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_map_cumsum.F MITgcm-checkpoint68i/pkg/exch2/w2_set_map_tiles.F MITgcm-checkpoint68i/pkg/exch2/w2_set_myown_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_single_facet.F MITgcm-checkpoint68i/pkg/exch2/w2_set_tile2tiles.F MITgcm-checkpoint68i/pkg/exf/ MITgcm-checkpoint68i/pkg/exf/EXF_CONSTANTS.h MITgcm-checkpoint68i/pkg/exf/EXF_FIELDS.h MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_PARAM.h MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_SIZE.h MITgcm-checkpoint68i/pkg/exf/EXF_OPTIONS.h MITgcm-checkpoint68i/pkg/exf/EXF_PARAM.h MITgcm-checkpoint68i/pkg/exf/TODO.txt MITgcm-checkpoint68i/pkg/exf/exf_ad.flow MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_diff.list MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots.F MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots__g.F MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots_ad.F MITgcm-checkpoint68i/pkg/exf/exf_bulkformulae.F MITgcm-checkpoint68i/pkg/exf/exf_check.F MITgcm-checkpoint68i/pkg/exf/exf_check_range.F MITgcm-checkpoint68i/pkg/exf/exf_description.tex MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_fill.F MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_init.F MITgcm-checkpoint68i/pkg/exf/exf_filter_rl.F MITgcm-checkpoint68i/pkg/exf/exf_getclim.F MITgcm-checkpoint68i/pkg/exf/exf_getffield_start.F MITgcm-checkpoint68i/pkg/exf/exf_getffieldrec.F MITgcm-checkpoint68i/pkg/exf/exf_getffields.F MITgcm-checkpoint68i/pkg/exf/exf_getfield_start.F MITgcm-checkpoint68i/pkg/exf/exf_getforcing.F MITgcm-checkpoint68i/pkg/exf/exf_getmonthsrec.F MITgcm-checkpoint68i/pkg/exf/exf_getsurfacefluxes.F MITgcm-checkpoint68i/pkg/exf/exf_getyearlyfieldname.F MITgcm-checkpoint68i/pkg/exf/exf_init_fixed.F MITgcm-checkpoint68i/pkg/exf/exf_init_fld.F MITgcm-checkpoint68i/pkg/exf/exf_init_interp.F MITgcm-checkpoint68i/pkg/exf/exf_init_varia.F MITgcm-checkpoint68i/pkg/exf/exf_interp.F MITgcm-checkpoint68i/pkg/exf/exf_interp_read.F MITgcm-checkpoint68i/pkg/exf/exf_interp_uv.F MITgcm-checkpoint68i/pkg/exf/exf_interpolate.F MITgcm-checkpoint68i/pkg/exf/exf_mapfields.F MITgcm-checkpoint68i/pkg/exf/exf_monitor.F MITgcm-checkpoint68i/pkg/exf/exf_monitor_ad.F MITgcm-checkpoint68i/pkg/exf/exf_radiation.F MITgcm-checkpoint68i/pkg/exf/exf_readparms.F MITgcm-checkpoint68i/pkg/exf/exf_set_fld.F MITgcm-checkpoint68i/pkg/exf/exf_set_gen.F MITgcm-checkpoint68i/pkg/exf/exf_set_obcs.F MITgcm-checkpoint68i/pkg/exf/exf_set_uv.F MITgcm-checkpoint68i/pkg/exf/exf_summary.F MITgcm-checkpoint68i/pkg/exf/exf_swapffields.F MITgcm-checkpoint68i/pkg/exf/exf_weight_sfx_diags.F MITgcm-checkpoint68i/pkg/exf/exf_wind.F MITgcm-checkpoint68i/pkg/exf/exf_zenithangle.F MITgcm-checkpoint68i/pkg/exf/exf_zenithangle_table.F MITgcm-checkpoint68i/pkg/fizhi/ MITgcm-checkpoint68i/pkg/fizhi/AtoC.F MITgcm-checkpoint68i/pkg/fizhi/CtoA.F MITgcm-checkpoint68i/pkg/fizhi/FIZHI_OPTIONS.h MITgcm-checkpoint68i/pkg/fizhi/cah-dat.h MITgcm-checkpoint68i/pkg/fizhi/cai-dat.h MITgcm-checkpoint68i/pkg/fizhi/chronos.h MITgcm-checkpoint68i/pkg/fizhi/co2-tran3.h MITgcm-checkpoint68i/pkg/fizhi/do_fizhi.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_SHP.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_SIZE.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_alarms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_chemistry_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_clockstuff.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagalarms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagnostics_init.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_driver.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_earth_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_fillnegs.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_gwdrag.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_chem.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_fixed.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vars.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_veg.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vegsurftiles.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_io_comms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_SIZE.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_lsm.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_lwrad.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_mnc_init.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_moist.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_mpistuff.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_ocean_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_rayleigh.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_read_pickup.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_readparms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_readwrite_vegtiles.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_step_diag.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_swrad.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_tendency_apply.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_turb.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_update_time.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_utils.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_wrapper.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_datetime.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_pickup.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_state.F MITgcm-checkpoint68i/pkg/fizhi/getcon.F MITgcm-checkpoint68i/pkg/fizhi/getpwhere.F MITgcm-checkpoint68i/pkg/fizhi/h2o-tran3.h MITgcm-checkpoint68i/pkg/fizhi/o3-tran3.h MITgcm-checkpoint68i/pkg/fizhi/sibber.h MITgcm-checkpoint68i/pkg/fizhi/slprs.F MITgcm-checkpoint68i/pkg/fizhi/snwmid.h MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_corr.F MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_fg.F MITgcm-checkpoint68i/pkg/fizhi/step_physics.F MITgcm-checkpoint68i/pkg/fizhi/update_chemistry_exports.F MITgcm-checkpoint68i/pkg/fizhi/update_earth_exports.F MITgcm-checkpoint68i/pkg/fizhi/update_ocean_exports.F MITgcm-checkpoint68i/pkg/flt/ MITgcm-checkpoint68i/pkg/flt/FLT.h MITgcm-checkpoint68i/pkg/flt/FLT_BUFF.h MITgcm-checkpoint68i/pkg/flt/FLT_OPTIONS.h MITgcm-checkpoint68i/pkg/flt/FLT_SIZE.h MITgcm-checkpoint68i/pkg/flt/README.flt MITgcm-checkpoint68i/pkg/flt/exch2_recv_get_vec.F MITgcm-checkpoint68i/pkg/flt/exch2_send_put_vec.F MITgcm-checkpoint68i/pkg/flt/exch_recv_get_vec.F MITgcm-checkpoint68i/pkg/flt/exch_send_put_vec.F MITgcm-checkpoint68i/pkg/flt/flt_down.F MITgcm-checkpoint68i/pkg/flt/flt_exch2.F MITgcm-checkpoint68i/pkg/flt/flt_exchg.F MITgcm-checkpoint68i/pkg/flt/flt_init_fixed.F MITgcm-checkpoint68i/pkg/flt/flt_init_varia.F MITgcm-checkpoint68i/pkg/flt/flt_interp_linear.F MITgcm-checkpoint68i/pkg/flt/flt_main.F MITgcm-checkpoint68i/pkg/flt/flt_mapping.F MITgcm-checkpoint68i/pkg/flt/flt_readparms.F MITgcm-checkpoint68i/pkg/flt/flt_runga2.F MITgcm-checkpoint68i/pkg/flt/flt_runga4.F MITgcm-checkpoint68i/pkg/flt/flt_traj.F MITgcm-checkpoint68i/pkg/flt/flt_up.F MITgcm-checkpoint68i/pkg/flt/flt_write_pickup.F MITgcm-checkpoint68i/pkg/frazil/ MITgcm-checkpoint68i/pkg/frazil/FRAZIL.h MITgcm-checkpoint68i/pkg/frazil/FRAZIL_OPTIONS.h MITgcm-checkpoint68i/pkg/frazil/frazil_ad.flow MITgcm-checkpoint68i/pkg/frazil/frazil_ad_diff.list MITgcm-checkpoint68i/pkg/frazil/frazil_calc_rhs.F MITgcm-checkpoint68i/pkg/frazil/frazil_description.tex MITgcm-checkpoint68i/pkg/frazil/frazil_diagnostics_init.F MITgcm-checkpoint68i/pkg/frazil/frazil_init_fixed.F MITgcm-checkpoint68i/pkg/frazil/frazil_init_varia.F MITgcm-checkpoint68i/pkg/frazil/frazil_tendency_apply.F MITgcm-checkpoint68i/pkg/gchem/ MITgcm-checkpoint68i/pkg/gchem/GCHEM.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_FIELDS.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_OPTIONS.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_SIZE.h MITgcm-checkpoint68i/pkg/gchem/gchem_ad_diff.list MITgcm-checkpoint68i/pkg/gchem/gchem_add_tendency.F MITgcm-checkpoint68i/pkg/gchem/gchem_calc_tendency.F MITgcm-checkpoint68i/pkg/gchem/gchem_check.F MITgcm-checkpoint68i/pkg/gchem/gchem_diagnostics_init.F MITgcm-checkpoint68i/pkg/gchem/gchem_fields_load.F MITgcm-checkpoint68i/pkg/gchem/gchem_forcing_sep.F MITgcm-checkpoint68i/pkg/gchem/gchem_init_fixed.F MITgcm-checkpoint68i/pkg/gchem/gchem_init_vari.F MITgcm-checkpoint68i/pkg/gchem/gchem_output.F MITgcm-checkpoint68i/pkg/gchem/gchem_readparms.F MITgcm-checkpoint68i/pkg/gchem/gchem_surfmean.F MITgcm-checkpoint68i/pkg/gchem/gchem_tr_register.F MITgcm-checkpoint68i/pkg/gchem/gchem_write_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/ MITgcm-checkpoint68i/pkg/generic_advdiff/GAD.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_FLUX_LIMITER.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_OPTIONS.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_SOM_VARS.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_diff.list MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advection.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advscheme.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_calc_rhs.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_check.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_del2.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_init.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_state.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_exch_som.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_implicit_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_fixed.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_varia.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_plm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_read_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_advect.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_exchanges.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_fill_cs_corner.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_lim_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_prep_cs_corner.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3c4_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_write_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/generic_advdiff.tex MITgcm-checkpoint68i/pkg/generic_advdiff/salt_fill.F MITgcm-checkpoint68i/pkg/ggl90/ MITgcm-checkpoint68i/pkg/ggl90/GGL90.h MITgcm-checkpoint68i/pkg/ggl90/GGL90_OPTIONS.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_diff.list MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_diff.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_visc.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_check.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_diagnostics_init.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_exchanges.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_idemix.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_fixed.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_varia.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_output.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_read_pickup.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_readparms.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_write_pickup.F MITgcm-checkpoint68i/pkg/gmredi/ MITgcm-checkpoint68i/pkg/gmredi/GMREDI.h MITgcm-checkpoint68i/pkg/gmredi/GMREDI_OPTIONS.h MITgcm-checkpoint68i/pkg/gmredi/GMREDI_TAVE.h MITgcm-checkpoint68i/pkg/gmredi/README_ADJOINT MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad.flow MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad_diff.list MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_bates_k.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_diff.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_eigs.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_b.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_bvp.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_qgleith.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_tensor.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_urms.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_check.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_description.tex MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_fill.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_impl.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_init.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_do_exch.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_fixed.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_varia.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_mnc_init.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_output.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_read_pickup.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_readparms.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_residual_flow.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_rtransport.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_limit.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_psi.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_write_pickup.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_xtransport.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_ytransport.F MITgcm-checkpoint68i/pkg/gmredi/submeso_calc_psi.F MITgcm-checkpoint68i/pkg/grdchk/ MITgcm-checkpoint68i/pkg/grdchk/GRDCHK_OPTIONS.h MITgcm-checkpoint68i/pkg/grdchk/grdchk.h MITgcm-checkpoint68i/pkg/grdchk/grdchk_check.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_description.tex MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_obcs_mask.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_position.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_getadxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_getxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_init.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_loc.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_main.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_print.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_readparms.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_setxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_summary.F MITgcm-checkpoint68i/pkg/gridalt/ MITgcm-checkpoint68i/pkg/gridalt/GRIDALT_OPTIONS.h MITgcm-checkpoint68i/pkg/gridalt/dyn2phys.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_diagnostics_init.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_initialise.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_mapping.h MITgcm-checkpoint68i/pkg/gridalt/gridalt_update.F MITgcm-checkpoint68i/pkg/gridalt/make_phys_grid.F MITgcm-checkpoint68i/pkg/gridalt/phys2dyn.F MITgcm-checkpoint68i/pkg/icefront/ MITgcm-checkpoint68i/pkg/icefront/ICEFRONT.h MITgcm-checkpoint68i/pkg/icefront/ICEFRONT_OPTIONS.h MITgcm-checkpoint68i/pkg/icefront/ICFSymbol.txt MITgcm-checkpoint68i/pkg/icefront/icefront_check.F MITgcm-checkpoint68i/pkg/icefront/icefront_description.tex MITgcm-checkpoint68i/pkg/icefront/icefront_diagnostics_init.F MITgcm-checkpoint68i/pkg/icefront/icefront_init_fixed.F MITgcm-checkpoint68i/pkg/icefront/icefront_init_varia.F MITgcm-checkpoint68i/pkg/icefront/icefront_readparms.F MITgcm-checkpoint68i/pkg/icefront/icefront_tendency_apply.F MITgcm-checkpoint68i/pkg/icefront/icefront_thermodynamics.F MITgcm-checkpoint68i/pkg/kl10/ MITgcm-checkpoint68i/pkg/kl10/KL10.h MITgcm-checkpoint68i/pkg/kl10/KL10_DIAGS.h MITgcm-checkpoint68i/pkg/kl10/KL10_OPTIONS.h MITgcm-checkpoint68i/pkg/kl10/KL10_TAVE.h MITgcm-checkpoint68i/pkg/kl10/kl10_calc.F MITgcm-checkpoint68i/pkg/kl10/kl10_calc_diff.F MITgcm-checkpoint68i/pkg/kl10/kl10_calc_visc.F MITgcm-checkpoint68i/pkg/kl10/kl10_check.F MITgcm-checkpoint68i/pkg/kl10/kl10_diagnostics_init.F MITgcm-checkpoint68i/pkg/kl10/kl10_init_fixed.F MITgcm-checkpoint68i/pkg/kl10/kl10_init_varia.F MITgcm-checkpoint68i/pkg/kl10/kl10_output.F MITgcm-checkpoint68i/pkg/kl10/kl10_readparms.F MITgcm-checkpoint68i/pkg/kpp/ MITgcm-checkpoint68i/pkg/kpp/KPP.h MITgcm-checkpoint68i/pkg/kpp/KPP_OPTIONS.h MITgcm-checkpoint68i/pkg/kpp/KPP_PARAMS.h MITgcm-checkpoint68i/pkg/kpp/KPP_TAVE.h MITgcm-checkpoint68i/pkg/kpp/kpp_ad_diff.list MITgcm-checkpoint68i/pkg/kpp/kpp_calc.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_ptr.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_s.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_t.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_visc.F MITgcm-checkpoint68i/pkg/kpp/kpp_check.F MITgcm-checkpoint68i/pkg/kpp/kpp_description.tex MITgcm-checkpoint68i/pkg/kpp/kpp_diagnostics_init.F MITgcm-checkpoint68i/pkg/kpp/kpp_do_exch.F MITgcm-checkpoint68i/pkg/kpp/kpp_forcing_surf.F MITgcm-checkpoint68i/pkg/kpp/kpp_init_fixed.F MITgcm-checkpoint68i/pkg/kpp/kpp_init_varia.F MITgcm-checkpoint68i/pkg/kpp/kpp_output.F MITgcm-checkpoint68i/pkg/kpp/kpp_readparms.F MITgcm-checkpoint68i/pkg/kpp/kpp_routines.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_ptr.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_s.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_t.F MITgcm-checkpoint68i/pkg/land/ MITgcm-checkpoint68i/pkg/land/LAND_OPTIONS.h MITgcm-checkpoint68i/pkg/land/LAND_PARAMS.h MITgcm-checkpoint68i/pkg/land/LAND_SIZE.h MITgcm-checkpoint68i/pkg/land/LAND_TAVE.h MITgcm-checkpoint68i/pkg/land/LAND_VARS.h MITgcm-checkpoint68i/pkg/land/land_albedo.F MITgcm-checkpoint68i/pkg/land/land_check.F MITgcm-checkpoint68i/pkg/land/land_diagnostics_init.F MITgcm-checkpoint68i/pkg/land/land_diagnostics_state.F MITgcm-checkpoint68i/pkg/land/land_do_diags.F MITgcm-checkpoint68i/pkg/land/land_impl_temp.F MITgcm-checkpoint68i/pkg/land/land_ini_vars.F MITgcm-checkpoint68i/pkg/land/land_init_fixed.F MITgcm-checkpoint68i/pkg/land/land_mnc_init.F MITgcm-checkpoint68i/pkg/land/land_monitor.F MITgcm-checkpoint68i/pkg/land/land_output.F MITgcm-checkpoint68i/pkg/land/land_read_pickup.F MITgcm-checkpoint68i/pkg/land/land_readparms.F MITgcm-checkpoint68i/pkg/land/land_stepfwd.F MITgcm-checkpoint68i/pkg/land/land_write_pickup.F MITgcm-checkpoint68i/pkg/layers/ MITgcm-checkpoint68i/pkg/layers/LAYERS.h MITgcm-checkpoint68i/pkg/layers/LAYERS_OPTIONS.h MITgcm-checkpoint68i/pkg/layers/LAYERS_SIZE.h MITgcm-checkpoint68i/pkg/layers/layers_ad_diff.list MITgcm-checkpoint68i/pkg/layers/layers_calc.F MITgcm-checkpoint68i/pkg/layers/layers_check.F MITgcm-checkpoint68i/pkg/layers/layers_diagnostics_init.F MITgcm-checkpoint68i/pkg/layers/layers_fluxcalc.F MITgcm-checkpoint68i/pkg/layers/layers_init_fixed.F MITgcm-checkpoint68i/pkg/layers/layers_init_varia.F MITgcm-checkpoint68i/pkg/layers/layers_mnc_init.F MITgcm-checkpoint68i/pkg/layers/layers_output.F MITgcm-checkpoint68i/pkg/layers/layers_readparms.F MITgcm-checkpoint68i/pkg/layers/layers_save.F MITgcm-checkpoint68i/pkg/layers/layers_thermodynamics.F MITgcm-checkpoint68i/pkg/layers/layers_wsurf_tr.F MITgcm-checkpoint68i/pkg/longstep/ MITgcm-checkpoint68i/pkg/longstep/LONGSTEP.h MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_OPTIONS.h MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_PARAMS.h MITgcm-checkpoint68i/pkg/longstep/README MITgcm-checkpoint68i/pkg/longstep/longstep_average.F MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d_fac.F MITgcm-checkpoint68i/pkg/longstep/longstep_check_iters.F MITgcm-checkpoint68i/pkg/longstep/longstep_correction_step.F MITgcm-checkpoint68i/pkg/longstep/longstep_diagnostics_init.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_fac.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_rs.F MITgcm-checkpoint68i/pkg/longstep/longstep_forcing_surf.F MITgcm-checkpoint68i/pkg/longstep/longstep_init_fixed.F MITgcm-checkpoint68i/pkg/longstep/longstep_init_varia.F MITgcm-checkpoint68i/pkg/longstep/longstep_readparms.F MITgcm-checkpoint68i/pkg/longstep/longstep_reset_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_thermodynamics.F MITgcm-checkpoint68i/pkg/matrix/ MITgcm-checkpoint68i/pkg/matrix/MATRIX.h MITgcm-checkpoint68i/pkg/matrix/MATRIX_OPTIONS.h MITgcm-checkpoint68i/pkg/matrix/matrix_init_varia.F MITgcm-checkpoint68i/pkg/matrix/matrix_output.F MITgcm-checkpoint68i/pkg/matrix/matrix_readparms.F MITgcm-checkpoint68i/pkg/matrix/matrix_store_tendency.F MITgcm-checkpoint68i/pkg/matrix/matrix_write_grid.F MITgcm-checkpoint68i/pkg/matrix/matrix_write_tendency.F MITgcm-checkpoint68i/pkg/mdsio/ MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_3D.h MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_WH.h MITgcm-checkpoint68i/pkg/mdsio/MDSIO_OPTIONS.h MITgcm-checkpoint68i/pkg/mdsio/mdsio_ad.flow MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertorl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_check4file.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_facef_read.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl_slice.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rs.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_meta.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_section.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_tape.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_whalos.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_readvec_loc.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_slice.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_segxtorx_2d.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_metafiles.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rs.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_meta.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_section.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_tape.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_whalos.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_writelocal.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_writevec_loc.F MITgcm-checkpoint68i/pkg/mnc/ MITgcm-checkpoint68i/pkg/mnc/CPP_OPTIONS.t MITgcm-checkpoint68i/pkg/mnc/MNC_BUFF.h MITgcm-checkpoint68i/pkg/mnc/MNC_COMMON.h MITgcm-checkpoint68i/pkg/mnc/MNC_OPTIONS.h MITgcm-checkpoint68i/pkg/mnc/MNC_PARAMS.h MITgcm-checkpoint68i/pkg/mnc/MNC_SIZE.h MITgcm-checkpoint68i/pkg/mnc/Makefile MITgcm-checkpoint68i/pkg/mnc/PACKAGES_CONFIG.t MITgcm-checkpoint68i/pkg/mnc/README.txt MITgcm-checkpoint68i/pkg/mnc/SIZE.t MITgcm-checkpoint68i/pkg/mnc/TESTING_README.txt MITgcm-checkpoint68i/pkg/mnc/build_netcdf_stubs MITgcm-checkpoint68i/pkg/mnc/mnc_ad.flow MITgcm-checkpoint68i/pkg/mnc/mnc_create_dir.c MITgcm-checkpoint68i/pkg/mnc/mnc_cw_citer.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_cvars.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_fsize.c MITgcm-checkpoint68i/pkg/mnc/mnc_cw_init.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_missingvals.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_model_attr.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_readwrite.template MITgcm-checkpoint68i/pkg/mnc/mnc_cw_udim.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_write_grid_info.F MITgcm-checkpoint68i/pkg/mnc/mnc_cwrapper.F MITgcm-checkpoint68i/pkg/mnc/mnc_description.tex MITgcm-checkpoint68i/pkg/mnc/mnc_dim.F MITgcm-checkpoint68i/pkg/mnc/mnc_dump.F MITgcm-checkpoint68i/pkg/mnc/mnc_file.F MITgcm-checkpoint68i/pkg/mnc/mnc_grid.F MITgcm-checkpoint68i/pkg/mnc/mnc_init.F MITgcm-checkpoint68i/pkg/mnc/mnc_readparms.F MITgcm-checkpoint68i/pkg/mnc/mnc_test_001.T MITgcm-checkpoint68i/pkg/mnc/mnc_test_002.T MITgcm-checkpoint68i/pkg/mnc/mnc_test_utils.T MITgcm-checkpoint68i/pkg/mnc/mnc_update_time.F MITgcm-checkpoint68i/pkg/mnc/mnc_utils.F MITgcm-checkpoint68i/pkg/mnc/mnc_var.F MITgcm-checkpoint68i/pkg/mnc/parse_local_info MITgcm-checkpoint68i/pkg/mnc/pre-defined_grids.txt MITgcm-checkpoint68i/pkg/mom_common/ MITgcm-checkpoint68i/pkg/mom_common/MOM_COMMON_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_common/MOM_VISC.h MITgcm-checkpoint68i/pkg/mom_common/mom_calc_3d_strain.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_absvort3.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hdiv.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hfacz.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_ke.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_relvort3.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_smag_3d.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_strain.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_tension.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_visc.F MITgcm-checkpoint68i/pkg/mom_common/mom_common_ad_diff.list MITgcm-checkpoint68i/pkg/mom_common/mom_diagnostics_init.F MITgcm-checkpoint68i/pkg/mom_common/mom_hdissip.F MITgcm-checkpoint68i/pkg/mom_common/mom_init_fixed.F MITgcm-checkpoint68i/pkg/mom_common/mom_quasihydrostatic.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_botdrag_coeff.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_implicit_r.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_rviscflux.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_uv_smag_3d.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_botdrag_coeff.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_implicit_r.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_rviscflux.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_limit.F MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_stretch.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_smag_3d.F MITgcm-checkpoint68i/pkg/mom_fluxform/ MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM.h MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_fluxform/mom_calc_rtrans.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform_ad_diff.list MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_uu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_vu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_wu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_coriolis.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_del2u.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_cylinder.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_sphere.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_xviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_yviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_uv_boundary.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_uv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_vv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_wv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_coriolis.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_del2v.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_cylinder.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_sphere.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_xviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_yviscflux.F MITgcm-checkpoint68i/pkg/mom_vecinv/ MITgcm-checkpoint68i/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv_ad_diff.list MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_del2uv.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_hdissip.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_grad_ke.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_vertshear.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_grad_ke.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_vertshear.F MITgcm-checkpoint68i/pkg/monitor/ MITgcm-checkpoint68i/pkg/monitor/MONITOR.h MITgcm-checkpoint68i/pkg/monitor/MONITOR_OPTIONS.h MITgcm-checkpoint68i/pkg/monitor/mon_advcfl.F MITgcm-checkpoint68i/pkg/monitor/mon_advcflw.F MITgcm-checkpoint68i/pkg/monitor/mon_advcflw2.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_advcfl.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_description.tex MITgcm-checkpoint68i/pkg/monitor/mon_init.F MITgcm-checkpoint68i/pkg/monitor/mon_ke.F MITgcm-checkpoint68i/pkg/monitor/mon_out.F MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_set_iounit.F MITgcm-checkpoint68i/pkg/monitor/mon_set_pref.F MITgcm-checkpoint68i/pkg/monitor/mon_solution.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_latbnd_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_surfcor.F MITgcm-checkpoint68i/pkg/monitor/mon_vort3.F MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rs.F MITgcm-checkpoint68i/pkg/monitor/monitor.F MITgcm-checkpoint68i/pkg/monitor/monitor_ad.F MITgcm-checkpoint68i/pkg/monitor/monitor_ad.flow MITgcm-checkpoint68i/pkg/monitor/monitor_description.tex MITgcm-checkpoint68i/pkg/monitor/monitor_g.F MITgcm-checkpoint68i/pkg/my82/ MITgcm-checkpoint68i/pkg/my82/MY82.h MITgcm-checkpoint68i/pkg/my82/MY82_OPTIONS.h MITgcm-checkpoint68i/pkg/my82/my82_calc.F MITgcm-checkpoint68i/pkg/my82/my82_calc_diff.F MITgcm-checkpoint68i/pkg/my82/my82_calc_visc.F MITgcm-checkpoint68i/pkg/my82/my82_check.F MITgcm-checkpoint68i/pkg/my82/my82_diagnostics_init.F MITgcm-checkpoint68i/pkg/my82/my82_init_fixed.F MITgcm-checkpoint68i/pkg/my82/my82_init_varia.F MITgcm-checkpoint68i/pkg/my82/my82_output.F MITgcm-checkpoint68i/pkg/my82/my82_readparms.F MITgcm-checkpoint68i/pkg/my82/my82_ri_number.F MITgcm-checkpoint68i/pkg/mypackage/ MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE.h MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE_OPTIONS.h MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad.flow MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad_diff.list MITgcm-checkpoint68i/pkg/mypackage/mypackage_calc_rhs.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_check.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_description.tex MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_init.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_state.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_fixed.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_varia.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_mnc_init.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_read_pickup.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_readparms.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_tendency_apply.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_write_pickup.F MITgcm-checkpoint68i/pkg/obcs/ MITgcm-checkpoint68i/pkg/obcs/OBCS_FIELDS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_GRID.h MITgcm-checkpoint68i/pkg/obcs/OBCS_OPTIONS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_PARAMS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_PTRACERS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_SEAICE.h MITgcm-checkpoint68i/pkg/obcs/ORLANSKI.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad.flow MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_diff.list MITgcm-checkpoint68i/pkg/obcs/obcs_add_tides.F MITgcm-checkpoint68i/pkg/obcs/obcs_adjust.F MITgcm-checkpoint68i/pkg/obcs/obcs_adjust_uvice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_eta.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ptracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_r_star.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_seaice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_surf_dr.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ts.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uv.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uvice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_w.F MITgcm-checkpoint68i/pkg/obcs/obcs_balance_flow.F MITgcm-checkpoint68i/pkg/obcs/obcs_calc.F MITgcm-checkpoint68i/pkg/obcs/obcs_calc_stevens.F MITgcm-checkpoint68i/pkg/obcs/obcs_check.F MITgcm-checkpoint68i/pkg/obcs/obcs_check_depths.F MITgcm-checkpoint68i/pkg/obcs/obcs_copy_tracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_copy_uv_n.F MITgcm-checkpoint68i/pkg/obcs/obcs_description.tex MITgcm-checkpoint68i/pkg/obcs/obcs_diag_balance.F MITgcm-checkpoint68i/pkg/obcs/obcs_exchanges.F MITgcm-checkpoint68i/pkg/obcs/obcs_exf_load.F MITgcm-checkpoint68i/pkg/obcs/obcs_fields_load.F MITgcm-checkpoint68i/pkg/obcs/obcs_init_fixed.F MITgcm-checkpoint68i/pkg/obcs/obcs_init_variables.F MITgcm-checkpoint68i/pkg/obcs/obcs_mon_stats.F MITgcm-checkpoint68i/pkg/obcs/obcs_monitor.F MITgcm-checkpoint68i/pkg/obcs/obcs_output.F MITgcm-checkpoint68i/pkg/obcs/obcs_prescribe_read.F MITgcm-checkpoint68i/pkg/obcs/obcs_read_pickup.F MITgcm-checkpoint68i/pkg/obcs/obcs_readparms.F MITgcm-checkpoint68i/pkg/obcs/obcs_save_uv_n.F MITgcm-checkpoint68i/pkg/obcs/obcs_seaice_sponge.F MITgcm-checkpoint68i/pkg/obcs/obcs_set_connect.F MITgcm-checkpoint68i/pkg/obcs/obcs_sponge.F MITgcm-checkpoint68i/pkg/obcs/obcs_u1_adv_tracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_write_pickup.F MITgcm-checkpoint68i/pkg/obcs/orlanski_east.F MITgcm-checkpoint68i/pkg/obcs/orlanski_init.F MITgcm-checkpoint68i/pkg/obcs/orlanski_north.F MITgcm-checkpoint68i/pkg/obcs/orlanski_south.F MITgcm-checkpoint68i/pkg/obcs/orlanski_west.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_PARAMS.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_TAVE.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCNCPL.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCN_CPL_OPTIONS.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_fill.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_init.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_exch_configs.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_export_import_data.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_import_cplparms.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_ini_vars.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init_fixed.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_output.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_readparms.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_register.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_write_pickup.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_apply_import.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_check_cplconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_diags.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_read_pickup.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_data.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_fields.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_ocnconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_atmconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_fields.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_store_my_data.F MITgcm-checkpoint68i/pkg/offline/ MITgcm-checkpoint68i/pkg/offline/OFFLINE.h MITgcm-checkpoint68i/pkg/offline/OFFLINE_OPTIONS.h MITgcm-checkpoint68i/pkg/offline/OFFLINE_SWITCH.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_diff.list MITgcm-checkpoint68i/pkg/offline/offline_check.F MITgcm-checkpoint68i/pkg/offline/offline_fields_load.F MITgcm-checkpoint68i/pkg/offline/offline_get_diffus.F MITgcm-checkpoint68i/pkg/offline/offline_init_varia.F MITgcm-checkpoint68i/pkg/offline/offline_readparms.F MITgcm-checkpoint68i/pkg/offline/offline_reset_parms.F MITgcm-checkpoint68i/pkg/openad/ MITgcm-checkpoint68i/pkg/openad/OPENAD_OPTIONS.h MITgcm-checkpoint68i/pkg/openad/ad_s_different_multiple.F MITgcm-checkpoint68i/pkg/openad/ad_s_ifnblnk.F MITgcm-checkpoint68i/pkg/openad/ad_s_ilnblnk.F MITgcm-checkpoint68i/pkg/openad/ad_s_mds_reclen.F MITgcm-checkpoint68i/pkg/openad/externalDummies.F MITgcm-checkpoint68i/pkg/openad/findAndDiff.bash MITgcm-checkpoint68i/pkg/openad/inner_do_loop.F MITgcm-checkpoint68i/pkg/openad/openad_ad_diff.list MITgcm-checkpoint68i/pkg/openad/openad_checkpointInit.F MITgcm-checkpoint68i/pkg/openad/openad_dumpAdjoint.F MITgcm-checkpoint68i/pkg/openad/seawater.F MITgcm-checkpoint68i/pkg/openad/the_model_main.F MITgcm-checkpoint68i/pkg/opps/ MITgcm-checkpoint68i/pkg/opps/OPPS.h MITgcm-checkpoint68i/pkg/opps/OPPS_OPTIONS.h MITgcm-checkpoint68i/pkg/opps/opps_calc.F MITgcm-checkpoint68i/pkg/opps/opps_check.F MITgcm-checkpoint68i/pkg/opps/opps_init.F MITgcm-checkpoint68i/pkg/opps/opps_interface.F MITgcm-checkpoint68i/pkg/opps/opps_readparms.F MITgcm-checkpoint68i/pkg/pkg_depend MITgcm-checkpoint68i/pkg/pkg_groups MITgcm-checkpoint68i/pkg/pp81/ MITgcm-checkpoint68i/pkg/pp81/PP81.h MITgcm-checkpoint68i/pkg/pp81/PP81_OPTIONS.h MITgcm-checkpoint68i/pkg/pp81/pp81_calc.F MITgcm-checkpoint68i/pkg/pp81/pp81_calc_diff.F MITgcm-checkpoint68i/pkg/pp81/pp81_calc_visc.F MITgcm-checkpoint68i/pkg/pp81/pp81_check.F MITgcm-checkpoint68i/pkg/pp81/pp81_diagnostics_init.F MITgcm-checkpoint68i/pkg/pp81/pp81_init_fixed.F MITgcm-checkpoint68i/pkg/pp81/pp81_init_varia.F MITgcm-checkpoint68i/pkg/pp81/pp81_output.F MITgcm-checkpoint68i/pkg/pp81/pp81_readparms.F MITgcm-checkpoint68i/pkg/pp81/pp81_ri_number.F MITgcm-checkpoint68i/pkg/profiles/ MITgcm-checkpoint68i/pkg/profiles/PROFILES_OPTIONS.h MITgcm-checkpoint68i/pkg/profiles/PROFILES_SIZE.h MITgcm-checkpoint68i/pkg/profiles/active_file_control_profiles.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.flow MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_ad.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_g.F MITgcm-checkpoint68i/pkg/profiles/cost_profiles.F MITgcm-checkpoint68i/pkg/profiles/profiles.flow MITgcm-checkpoint68i/pkg/profiles/profiles.h MITgcm-checkpoint68i/pkg/profiles/profiles_ad_diff.list MITgcm-checkpoint68i/pkg/profiles/profiles_findunit.F MITgcm-checkpoint68i/pkg/profiles/profiles_ini_io.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_fixed.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_ncfile.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_varia.F MITgcm-checkpoint68i/pkg/profiles/profiles_inloop.F MITgcm-checkpoint68i/pkg/profiles/profiles_interp.F MITgcm-checkpoint68i/pkg/profiles/profiles_readparms.F MITgcm-checkpoint68i/pkg/profiles/profiles_readvector.F MITgcm-checkpoint68i/pkg/ptracers/ MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_FIELDS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_MOD.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_OPTIONS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_PARAMS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_SIZE.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_START.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_TAVE.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad.flow MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_diff.list MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_dump.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_adcommon.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_apply_forcing.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_calc_wsurf_tr.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_check.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_check_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_convect.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_debug.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_init.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_state.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_data_mod.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_mod.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_fields_blocking_exch.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_forcing_surf.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_fixed.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_varia.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_integrate.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_mnc_init.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor_ad.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_output.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_read_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_readparms.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_reset.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_set_iolabel.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_switch_onoff.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_timeave.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_turnoff_io.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_state.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_timeave.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_zonal_filt_apply.F MITgcm-checkpoint68i/pkg/rbcs/ MITgcm-checkpoint68i/pkg/rbcs/RBCS_FIELDS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_OPTIONS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_PARAMS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_SIZE.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_diff.list MITgcm-checkpoint68i/pkg/rbcs/rbcs_add_tendency.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_fields_load.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_fixed.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_varia.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_readparms.F MITgcm-checkpoint68i/pkg/regrid/ MITgcm-checkpoint68i/pkg/regrid/Makefile MITgcm-checkpoint68i/pkg/regrid/REGRID.h MITgcm-checkpoint68i/pkg/regrid/REGRID_OPTIONS.h MITgcm-checkpoint68i/pkg/regrid/REGRID_SIZE.h MITgcm-checkpoint68i/pkg/regrid/regrid_check.F MITgcm-checkpoint68i/pkg/regrid/regrid_description.tex MITgcm-checkpoint68i/pkg/regrid/regrid_init_fixed.F MITgcm-checkpoint68i/pkg/regrid/regrid_init_varia.F MITgcm-checkpoint68i/pkg/regrid/regrid_mnc_init.F MITgcm-checkpoint68i/pkg/regrid/regrid_readparms.F MITgcm-checkpoint68i/pkg/regrid/regrid_scalar_out.template MITgcm-checkpoint68i/pkg/runclock/ MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK.h MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK_OPTIONS.h MITgcm-checkpoint68i/pkg/runclock/runclock_check.F MITgcm-checkpoint68i/pkg/runclock/runclock_continue.F MITgcm-checkpoint68i/pkg/runclock/runclock_gettime.F MITgcm-checkpoint68i/pkg/runclock/runclock_init.F MITgcm-checkpoint68i/pkg/runclock/runclock_readparms.F MITgcm-checkpoint68i/pkg/rw/ MITgcm-checkpoint68i/pkg/rw/RW_MFLDS.h MITgcm-checkpoint68i/pkg/rw/RW_OPTIONS.h MITgcm-checkpoint68i/pkg/rw/get_write_global_fld.F MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rl.F MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rs.F MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rl.F MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rs.F MITgcm-checkpoint68i/pkg/rw/read_glvec_rl.F MITgcm-checkpoint68i/pkg/rw/read_glvec_rs.F MITgcm-checkpoint68i/pkg/rw/read_mflds.F MITgcm-checkpoint68i/pkg/rw/read_rec.F MITgcm-checkpoint68i/pkg/rw/rw_ad.flow MITgcm-checkpoint68i/pkg/rw/rw_ad_diff.list MITgcm-checkpoint68i/pkg/rw/rw_get_suffix.F MITgcm-checkpoint68i/pkg/rw/set_write_global_fld.F MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rs.F MITgcm-checkpoint68i/pkg/rw/write_glvec_rl.F MITgcm-checkpoint68i/pkg/rw/write_glvec_rs.F MITgcm-checkpoint68i/pkg/rw/write_local_rl.F MITgcm-checkpoint68i/pkg/rw/write_local_rs.F MITgcm-checkpoint68i/pkg/rw/write_rec.F MITgcm-checkpoint68i/pkg/salt_plume/ MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME.h MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME_OPTIONS.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_diff.list MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_apply.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_calc_depth.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_check.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_description.tex MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_fill.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_init.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_do_exch.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_forcing_surf.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_frac.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_fixed.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_varia.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_mnc_init.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_readparms.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_s.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_t.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_volfrac.F MITgcm-checkpoint68i/pkg/sbo/ MITgcm-checkpoint68i/pkg/sbo/SBO.h MITgcm-checkpoint68i/pkg/sbo/SBO_OPTIONS.h MITgcm-checkpoint68i/pkg/sbo/sbo_calc.F MITgcm-checkpoint68i/pkg/sbo/sbo_check.F MITgcm-checkpoint68i/pkg/sbo/sbo_description.tex MITgcm-checkpoint68i/pkg/sbo/sbo_output.F MITgcm-checkpoint68i/pkg/sbo/sbo_readparms.F MITgcm-checkpoint68i/pkg/sbo/sbo_rho.F MITgcm-checkpoint68i/pkg/seaice/ MITgcm-checkpoint68i/pkg/seaice/SEAICE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_COST.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_OPTIONS.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_PARAMS.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_SIZE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_TAVE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_TRACER.h MITgcm-checkpoint68i/pkg/seaice/advect.F MITgcm-checkpoint68i/pkg/seaice/cost_ice_test.F MITgcm-checkpoint68i/pkg/seaice/diffus.F MITgcm-checkpoint68i/pkg/seaice/dynsolver.F MITgcm-checkpoint68i/pkg/seaice/lsr.F MITgcm-checkpoint68i/pkg/seaice/ostres.F MITgcm-checkpoint68i/pkg/seaice/seaice.flow MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_diff.list MITgcm-checkpoint68i/pkg/seaice/seaice_ad_dump.F MITgcm-checkpoint68i/pkg/seaice/seaice_advdiff.F MITgcm-checkpoint68i/pkg/seaice/seaice_advection.F MITgcm-checkpoint68i/pkg/seaice/seaice_bottomdrag_coeffs.F MITgcm-checkpoint68i/pkg/seaice/seaice_budget_ocean.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_ice_strength.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_lhs.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_residual.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_rhs.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_strainrates.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_stressdiv.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_viscosities.F MITgcm-checkpoint68i/pkg/seaice/seaice_check.F MITgcm-checkpoint68i/pkg/seaice/seaice_check_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_accumulate_mean.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_areasst.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_concentration.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_driver.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_export.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_final.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_fixed.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_varia.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sensi.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sss.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sst.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_weights.F MITgcm-checkpoint68i/pkg/seaice/seaice_ctrl_map_ini.F MITgcm-checkpoint68i/pkg/seaice/seaice_description.tex MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_init.F MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_state.F MITgcm-checkpoint68i/pkg/seaice/seaice_diffusion.F MITgcm-checkpoint68i/pkg/seaice/seaice_do_ridging.F MITgcm-checkpoint68i/pkg/seaice/seaice_dynsolver.F MITgcm-checkpoint68i/pkg/seaice/seaice_evp.F MITgcm-checkpoint68i/pkg/seaice/seaice_fake.F MITgcm-checkpoint68i/pkg/seaice/seaice_fgmres.F MITgcm-checkpoint68i/pkg/seaice/seaice_freedrift.F MITgcm-checkpoint68i/pkg/seaice/seaice_get_dynforcing.F MITgcm-checkpoint68i/pkg/seaice/seaice_growth.F MITgcm-checkpoint68i/pkg/seaice/seaice_growth_adx.F MITgcm-checkpoint68i/pkg/seaice/seaice_init_fixed.F MITgcm-checkpoint68i/pkg/seaice/seaice_init_varia.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_redist.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_remap.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_sum.F MITgcm-checkpoint68i/pkg/seaice/seaice_jacvec.F MITgcm-checkpoint68i/pkg/seaice/seaice_jfnk.F MITgcm-checkpoint68i/pkg/seaice/seaice_krylov.F MITgcm-checkpoint68i/pkg/seaice/seaice_lsr.F MITgcm-checkpoint68i/pkg/seaice/seaice_map_thsice.F MITgcm-checkpoint68i/pkg/seaice/seaice_mnc_init.F MITgcm-checkpoint68i/pkg/seaice/seaice_model.F MITgcm-checkpoint68i/pkg/seaice/seaice_mom_advection.F MITgcm-checkpoint68i/pkg/seaice/seaice_monitor.F MITgcm-checkpoint68i/pkg/seaice/seaice_monitor_ad.F MITgcm-checkpoint68i/pkg/seaice/seaice_obcs_output.F MITgcm-checkpoint68i/pkg/seaice/seaice_ocean_stress.F MITgcm-checkpoint68i/pkg/seaice/seaice_oceandrag_coeffs.F MITgcm-checkpoint68i/pkg/seaice/seaice_output.F MITgcm-checkpoint68i/pkg/seaice/seaice_preconditioner.F MITgcm-checkpoint68i/pkg/seaice/seaice_prepare_ridging.F MITgcm-checkpoint68i/pkg/seaice/seaice_read_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_readparms.F MITgcm-checkpoint68i/pkg/seaice/seaice_reg_ridge.F MITgcm-checkpoint68i/pkg/seaice/seaice_solve4temp.F MITgcm-checkpoint68i/pkg/seaice/seaice_summary.F MITgcm-checkpoint68i/pkg/seaice/seaice_tracer_phys.F MITgcm-checkpoint68i/pkg/seaice/seaice_turnoff_io.F MITgcm-checkpoint68i/pkg/seaice/seaice_write_pickup.F MITgcm-checkpoint68i/pkg/shap_filt/ MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT.h MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT_OPTIONS.h MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_ad_diff.list MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_ts.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_uv.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_computvort.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_diagnostics_init.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_init_fixed.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_readparms.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_relvort3.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s1.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s2.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s4.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracerold.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_u.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s1.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2c.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s4.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_v.F MITgcm-checkpoint68i/pkg/shelfice/ MITgcm-checkpoint68i/pkg/shelfice/SHELFICE.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_COST.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_OPTIONS.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_TAVE.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_diff.list MITgcm-checkpoint68i/pkg/shelfice/shelfice_check.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_accumulate.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_final.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_shifwflx.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_diagnostics_drag.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing_surf.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_depths.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_fixed.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_varia.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_mask_seaice.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_mnc_init.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_output.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_read_pickup.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_readparms.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_c_mask.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_calc_w.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_state.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_uv_mask.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remeshing.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_step_icemass.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_thermodynamics.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_u_drag_coeff.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_v_drag_coeff.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_write_pickup.F MITgcm-checkpoint68i/pkg/showflops/ MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS.h MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_INIT.h MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_OPTIONS.h MITgcm-checkpoint68i/pkg/showflops/showflops_ad.flow MITgcm-checkpoint68i/pkg/showflops/showflops_init.F MITgcm-checkpoint68i/pkg/showflops/showflops_inloop.F MITgcm-checkpoint68i/pkg/showflops/showflops_insolve.F MITgcm-checkpoint68i/pkg/smooth/ MITgcm-checkpoint68i/pkg/smooth/SMOOTH.h MITgcm-checkpoint68i/pkg/smooth/SMOOTH_OPTIONS.h MITgcm-checkpoint68i/pkg/smooth/smooth2d.F MITgcm-checkpoint68i/pkg/smooth/smooth3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_ad_diff.list MITgcm-checkpoint68i/pkg/smooth/smooth_basic2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_check.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl2dw.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_description.tex MITgcm-checkpoint68i/pkg/smooth/smooth_diff2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_diff3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_hetero2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_impldiff.F MITgcm-checkpoint68i/pkg/smooth/smooth_init2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_init3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_init_fixed.F MITgcm-checkpoint68i/pkg/smooth/smooth_init_varia.F MITgcm-checkpoint68i/pkg/smooth/smooth_readparms.F MITgcm-checkpoint68i/pkg/smooth/smooth_rhs.F MITgcm-checkpoint68i/pkg/sphere/ MITgcm-checkpoint68i/pkg/sphere/exch_all_2d_rl.F MITgcm-checkpoint68i/pkg/sphere/sphere.F MITgcm-checkpoint68i/pkg/sphere/sphere.h MITgcm-checkpoint68i/pkg/sphere/sphere_ad.flow MITgcm-checkpoint68i/pkg/sphere/sphere_ad_diff.list MITgcm-checkpoint68i/pkg/streamice/ MITgcm-checkpoint68i/pkg/streamice/STREAMICE.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_ADV.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_BDRY.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CG.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CTRL_FLUX.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_OPTIONS.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_PETSC.h MITgcm-checkpoint68i/pkg/streamice/adstreamice_cg_solve.F MITgcm-checkpoint68i/pkg/streamice/adstreamice_invert_surf_forthick.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_prime_streamice.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice_prime.F MITgcm-checkpoint68i/pkg/streamice/phi_gl_streamice.F MITgcm-checkpoint68i/pkg/streamice/slope_limiter.F MITgcm-checkpoint68i/pkg/streamice/streamice.flow MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_diff.list MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_x.F MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_y.F MITgcm-checkpoint68i/pkg/streamice/streamice_adv_front.F MITgcm-checkpoint68i/pkg/streamice/streamice_advect_2dtracer.F MITgcm-checkpoint68i/pkg/streamice/streamice_advect_thickness.F MITgcm-checkpoint68i/pkg/streamice/streamice_apply_flux_ctrl.F MITgcm-checkpoint68i/pkg/streamice/streamice_bstress_exponent.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_functions.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_matfree.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_wrapper.F MITgcm-checkpoint68i/pkg/streamice/streamice_check.F MITgcm-checkpoint68i/pkg/streamice/streamice_cost_surf_accum.F MITgcm-checkpoint68i/pkg/streamice/streamice_diagnostics_state.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_fd.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_ppm.F MITgcm-checkpoint68i/pkg/streamice/streamice_dump.F MITgcm-checkpoint68i/pkg/streamice/streamice_dump_ad.F MITgcm-checkpoint68i/pkg/streamice/streamice_fields_load.F MITgcm-checkpoint68i/pkg/streamice/streamice_finalize_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_forced_buttress.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_fp_err_oad.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_fp_err.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err_oad.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_diagnostics.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_fixed.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_phi.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_varia.F MITgcm-checkpoint68i/pkg/streamice/streamice_initialise_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_invert_surf_forthick.F MITgcm-checkpoint68i/pkg/streamice/streamice_petsc_numerate.F MITgcm-checkpoint68i/pkg/streamice/streamice_petscmatdestroy.F MITgcm-checkpoint68i/pkg/streamice/streamice_read_pickup.F MITgcm-checkpoint68i/pkg/streamice/streamice_readparms.F MITgcm-checkpoint68i/pkg/streamice/streamice_taub.F MITgcm-checkpoint68i/pkg/streamice/streamice_timestep.F MITgcm-checkpoint68i/pkg/streamice/streamice_tridiag_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_upd_ffrac_uncoupled.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phi.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phistage.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve_openad.F MITgcm-checkpoint68i/pkg/streamice/streamice_velmask_upd.F MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta.F MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta_hybrid.F MITgcm-checkpoint68i/pkg/streamice/streamice_write_pickup.F MITgcm-checkpoint68i/pkg/thsice/ MITgcm-checkpoint68i/pkg/thsice/THSICE_COST.h MITgcm-checkpoint68i/pkg/thsice/THSICE_DEBUG.h MITgcm-checkpoint68i/pkg/thsice/THSICE_OPTIONS.h MITgcm-checkpoint68i/pkg/thsice/THSICE_PARAMS.h MITgcm-checkpoint68i/pkg/thsice/THSICE_SIZE.h MITgcm-checkpoint68i/pkg/thsice/THSICE_TAVE.h MITgcm-checkpoint68i/pkg/thsice/THSICE_VARS.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad.flow MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev1_dir.h 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MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/ctrl_map_ini_genarr.F MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/packages.conf MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/ptracers_forcing_surf.F MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad.som81/ MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad.som81/data MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/ MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.autodiff MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.cost MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.ctrl MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.gmredi MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.grdchk MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.optim MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.pkg MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.ptracers MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/eedata MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/prepare_run MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/ MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.autodiff MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.cost MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.ctrl MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.gmredi MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.grdchk 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MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/ MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/.gitignore MITgcm-checkpoint68i/verification/verification_parser.py MITgcm-checkpoint68i/verification/vermix/ MITgcm-checkpoint68i/verification/vermix/build/ MITgcm-checkpoint68i/verification/vermix/build/.gitignore MITgcm-checkpoint68i/verification/vermix/code/ MITgcm-checkpoint68i/verification/vermix/code/CPP_EEOPTIONS.h MITgcm-checkpoint68i/verification/vermix/code/CPP_OPTIONS.h MITgcm-checkpoint68i/verification/vermix/code/DIAGNOSTICS_SIZE.h MITgcm-checkpoint68i/verification/vermix/code/KPP_OPTIONS.h MITgcm-checkpoint68i/verification/vermix/code/SIZE.h MITgcm-checkpoint68i/verification/vermix/code/packages.conf MITgcm-checkpoint68i/verification/vermix/input.dd/ MITgcm-checkpoint68i/verification/vermix/input.dd/data MITgcm-checkpoint68i/verification/vermix/input.dd/data.kpp MITgcm-checkpoint68i/verification/vermix/input.ggl90/ MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.ggl90 MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.pkg MITgcm-checkpoint68i/verification/vermix/input.my82/ MITgcm-checkpoint68i/verification/vermix/input.my82/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.my82/data.my82 MITgcm-checkpoint68i/verification/vermix/input.my82/data.pkg MITgcm-checkpoint68i/verification/vermix/input.opps/ MITgcm-checkpoint68i/verification/vermix/input.opps/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.opps/data.opps MITgcm-checkpoint68i/verification/vermix/input.opps/data.pkg MITgcm-checkpoint68i/verification/vermix/input.pp81/ MITgcm-checkpoint68i/verification/vermix/input.pp81/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pkg MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pp81 MITgcm-checkpoint68i/verification/vermix/input/ MITgcm-checkpoint68i/verification/vermix/input/Qnet_72.forcing MITgcm-checkpoint68i/verification/vermix/input/S.doublediff MITgcm-checkpoint68i/verification/vermix/input/S.init MITgcm-checkpoint68i/verification/vermix/input/T.doublediff MITgcm-checkpoint68i/verification/vermix/input/TKE.init MITgcm-checkpoint68i/verification/vermix/input/T_26.init MITgcm-checkpoint68i/verification/vermix/input/data MITgcm-checkpoint68i/verification/vermix/input/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input/data.kpp MITgcm-checkpoint68i/verification/vermix/input/data.mnc MITgcm-checkpoint68i/verification/vermix/input/data.pkg MITgcm-checkpoint68i/verification/vermix/input/eedata MITgcm-checkpoint68i/verification/vermix/input/gendata.m MITgcm-checkpoint68i/verification/vermix/input/taux_72.forcing MITgcm-checkpoint68i/verification/vermix/input/tr_checklist MITgcm-checkpoint68i/verification/vermix/results/ MITgcm-checkpoint68i/verification/vermix/results/output.dd.txt MITgcm-checkpoint68i/verification/vermix/results/output.ggl90.txt MITgcm-checkpoint68i/verification/vermix/results/output.my82.txt MITgcm-checkpoint68i/verification/vermix/results/output.opps.txt MITgcm-checkpoint68i/verification/vermix/results/output.pp81.txt MITgcm-checkpoint68i/verification/vermix/results/output.txt MITgcm-checkpoint68i/verification/vermix/run/ MITgcm-checkpoint68i/verification/vermix/run/.gitignore [41;37m step #5: BuildMITgcm [0m GENMAKE : A program for GENerating MAKEfiles for the MITgcm project. For a quick list of options, use "genmake2 -h" or for more detail see the documentation, section "Building the model" (under "Getting Started") at: https://mitgcm.readthedocs.io/ === Processing options files and arguments === getting local config information: none found getting OPTFILE information: Warning: no OPTFILE specified so we'll look for possible settings === Searching for possible settings for OPTFILE === The platform appears to be: linux_amd64 The possible FORTRAN compilers found in your path are: gfortran f77 f95 mpif77 Setting OPTFILE to: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran using OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran" get Compiler-version: '8' getting AD_OPTFILE information: using AD_OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/adjoint_options/adjoint_default" check Fortran Compiler... pass (set FC_CHECK=5/5) check makedepend (local: 0, system: 1, 1) Turning on MPI cpp macros === Checking system libraries === Do we have the system() command using mpif77... yes Do we have the fdate() command using mpif77... yes Do we have the etime() command using mpif77... c,r: yes (SbR) Can we call simple C routines (here, "cloc()") using mpif77... yes Can we unlimit the stack size using mpif77... yes Can we register a signal handler using mpif77... yes Can we use stat() through C calls... yes Can we create NetCDF-enabled binaries... no skip check for LAPACK Libs Can we call FLUSH intrinsic subroutine... yes === Setting defaults === Adding MODS directories: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code Making source files in eesupp from templates Making source files in pkg/exch2 from templates Making source files in pkg/regrid from templates === Determining package settings === getting package dependency info from /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_depend getting package groups info from /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_groups checking list of packages to compile: using PKG_LIST="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/packages.conf" before group expansion packages are: gfd obcs shelfice diagnostics timeave replacing "gfd" with: mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor after group expansion packages are: mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor obcs shelfice diagnostics timeave applying DISABLE settings applying ENABLE settings packages are: debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave applying package dependency rules packages are: debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave Adding STANDARDDIRS='eesupp model' Searching for *OPTIONS.h files in order to warn about the presence of "#define "-type statements that are no longer allowed: found CPP_EEOPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h" found CPP_OPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h" Creating the list of files for the adjoint compiler. === Creating the Makefile === setting INCLUDES Determining the list of source and include files Writing makefile: Makefile Add the source list for AD code generation Making list of "exceptions" that need ".p" files Making list of NOOPTFILES Add rules for links Adding makedepend marker === Done === original 'Makefile' generated successfully => next steps: > make depend > make (<-- to generate executable) make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build' if [ ! -L cpl_issm.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/cpl_issm.F cpl_issm.F; fi if [ ! -L do_oceanic_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/do_oceanic_phys.F do_oceanic_phys.F; fi if [ ! -L eeboot_minimal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eeboot_minimal.F eeboot_minimal.F; fi if [ ! -L eedie.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eedie.F eedie.F; fi if [ ! -L chksum_tiled.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/chksum_tiled.F chksum_tiled.F; fi if [ ! -L debug_call.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_call.F debug_call.F; fi if [ ! -L debug_cs_corner_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_cs_corner_uv.F debug_cs_corner_uv.F; fi if [ ! -L debug_enter.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_enter.F debug_enter.F; fi if [ ! -L debug_fld_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rl.F debug_fld_stats_rl.F; fi if [ ! -L debug_fld_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rs.F debug_fld_stats_rs.F; fi if [ ! -L debug_leave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_leave.F debug_leave.F; fi if [ ! -L debug_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_msg.F debug_msg.F; fi if [ ! -L debug_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rl.F debug_stats_rl.F; fi if [ ! -L debug_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rs.F debug_stats_rs.F; fi if [ ! -L fill_in_corners_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/fill_in_corners_rl.F fill_in_corners_rl.F; fi if [ ! -L write_fullarray_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rl.F write_fullarray_rl.F; fi if [ ! -L write_fullarray_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rs.F write_fullarray_rs.F; fi if [ ! -L diag_calc_psivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_calc_psivel.F diag_calc_psivel.F; fi if [ ! -L diag_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_cg2d.F diag_cg2d.F; fi if [ ! -L diagnostics_addtolist.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_addtolist.F diagnostics_addtolist.F; fi if [ ! -L diagnostics_calc_phivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_calc_phivel.F diagnostics_calc_phivel.F; fi if [ ! -L diagnostics_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_check.F diagnostics_check.F; fi if [ ! -L diagnostics_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_clear.F diagnostics_clear.F; fi if [ ! -L diagnostics_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill.F diagnostics_fill.F; fi if [ ! -L diagnostics_fill_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_field.F diagnostics_fill_field.F; fi if [ ! -L diagnostics_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_rs.F diagnostics_fill_rs.F; fi if [ ! -L diagnostics_fill_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_state.F diagnostics_fill_state.F; fi if [ ! -L diagnostics_fract_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fract_fill.F diagnostics_fract_fill.F; fi if [ ! -L diagnostics_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_ini_io.F diagnostics_ini_io.F; fi if [ ! -L diagnostics_init_early.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_early.F diagnostics_init_early.F; fi if [ ! -L diagnostics_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_fixed.F diagnostics_init_fixed.F; fi if [ ! -L diagnostics_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_varia.F diagnostics_init_varia.F; fi if [ ! -L diagnostics_interp_p2p.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_p2p.F diagnostics_interp_p2p.F; fi if [ ! -L diagnostics_interp_vert.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_vert.F diagnostics_interp_vert.F; fi if [ ! -L diagnostics_is_on.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_is_on.F diagnostics_is_on.F; fi if [ ! -L diagnostics_list_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_list_check.F diagnostics_list_check.F; fi if [ ! -L diagnostics_main_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_main_init.F diagnostics_main_init.F; fi if [ ! -L diagnostics_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_mnc_out.F diagnostics_mnc_out.F; fi if [ ! -L diagnostics_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_out.F diagnostics_out.F; fi if [ ! -L diagnostics_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_readparms.F diagnostics_readparms.F; fi if [ ! -L diagnostics_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_read_pickup.F diagnostics_read_pickup.F; fi if [ ! -L diagnostics_scale_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill.F diagnostics_scale_fill.F; fi if [ ! -L diagnostics_scale_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill_rs.F diagnostics_scale_fill_rs.F; fi if [ ! -L diagnostics_set_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_calc.F diagnostics_set_calc.F; fi if [ ! -L diagnostics_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_setdiag.F diagnostics_setdiag.F; fi if [ ! -L diagnostics_set_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_levels.F diagnostics_set_levels.F; fi if [ ! -L diagnostics_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_pointers.F diagnostics_set_pointers.F; fi if [ ! -L diagnostics_status_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_status_error.F diagnostics_status_error.F; fi if [ ! -L diagnostics_sum_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_sum_levels.F diagnostics_sum_levels.F; fi if [ ! -L diagnostics_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_summary.F diagnostics_summary.F; fi if [ ! -L diagnostics_switch_onoff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_switch_onoff.F diagnostics_switch_onoff.F; fi if [ ! -L diagnostics_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_utils.F diagnostics_utils.F; fi if [ ! -L diagnostics_write_adj.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_adj.F diagnostics_write_adj.F; fi if [ ! -L diagnostics_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write.F diagnostics_write.F; fi if [ ! -L diagnostics_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_pickup.F diagnostics_write_pickup.F; fi if [ ! -L diagstats_ascii_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ascii_out.F diagstats_ascii_out.F; fi if [ ! -L diagstats_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_calc.F diagstats_calc.F; fi if [ ! -L diagstats_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_clear.F diagstats_clear.F; fi if [ ! -L diagstats_close_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_close_io.F diagstats_close_io.F; fi if [ ! -L diagstats_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_fill.F diagstats_fill.F; fi if [ ! -L diagstats_global.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_global.F diagstats_global.F; fi if [ ! -L diagstats_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ini_io.F diagstats_ini_io.F; fi if [ ! -L diagstats_local.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_local.F diagstats_local.F; fi if [ ! -L diagstats_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_mnc_out.F diagstats_mnc_out.F; fi if [ ! -L diagstats_others_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_others_calc.F diagstats_others_calc.F; fi if [ ! -L diagstats_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_output.F diagstats_output.F; fi if [ ! -L diagstats_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_setdiag.F diagstats_setdiag.F; fi if [ ! -L diagstats_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_pointers.F diagstats_set_pointers.F; fi if [ ! -L diagstats_set_regions.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_regions.F diagstats_set_regions.F; fi if [ ! -L diag_vegtile_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_vegtile_fill.F diag_vegtile_fill.F; fi if [ ! -L gad_advection.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advection.F gad_advection.F; fi if [ ! -L gad_advscheme.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advscheme.F gad_advscheme.F; fi if [ ! -L gad_biharm_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_r.F gad_biharm_r.F; fi if [ ! -L gad_biharm_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_x.F gad_biharm_x.F; fi if [ ! -L gad_biharm_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_y.F gad_biharm_y.F; fi if [ ! -L gad_c2_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_r.F gad_c2_adv_r.F; fi if [ ! -L gad_c2_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_x.F gad_c2_adv_x.F; fi if [ ! -L gad_c2_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_y.F gad_c2_adv_y.F; fi if [ ! -L gad_c2_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_impl_r.F gad_c2_impl_r.F; fi if [ ! -L gad_c4_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_r.F gad_c4_adv_r.F; fi if [ ! -L gad_c4_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_x.F gad_c4_adv_x.F; fi if [ ! -L gad_c4_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_y.F gad_c4_adv_y.F; fi if [ ! -L gad_calc_rhs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_calc_rhs.F gad_calc_rhs.F; fi if [ ! -L gad_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_check.F gad_check.F; fi if [ ! -L gad_del2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_del2.F gad_del2.F; fi if [ ! -L gad_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_init.F gad_diagnostics_init.F; fi if [ ! -L gad_diagnostics_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_state.F gad_diagnostics_state.F; fi if [ ! -L gad_diff_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_r.F gad_diff_r.F; fi if [ ! -L gad_diff_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_x.F gad_diff_x.F; fi if [ ! -L gad_diff_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_y.F gad_diff_y.F; fi if [ ! -L gad_dst2u1_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_r.F gad_dst2u1_adv_r.F; fi if [ ! -L gad_dst2u1_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_x.F gad_dst2u1_adv_x.F; fi if [ ! -L gad_dst2u1_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_y.F gad_dst2u1_adv_y.F; fi if [ ! -L gad_dst2u1_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_impl_r.F gad_dst2u1_impl_r.F; fi if [ ! -L gad_dst3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_r.F gad_dst3_adv_r.F; fi if [ ! -L gad_dst3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_x.F gad_dst3_adv_x.F; fi if [ ! -L gad_dst3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_y.F gad_dst3_adv_y.F; fi if [ ! -L gad_dst3fl_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_r.F gad_dst3fl_adv_r.F; fi if [ ! -L gad_dst3fl_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_x.F gad_dst3fl_adv_x.F; fi if [ ! -L gad_dst3fl_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_y.F gad_dst3fl_adv_y.F; fi if [ ! -L gad_dst3fl_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_impl_r.F gad_dst3fl_impl_r.F; fi if [ ! -L gad_exch_som.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_exch_som.F gad_exch_som.F; fi if [ ! -L gad_fluxlimit_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_r.F gad_fluxlimit_adv_r.F; fi if [ ! -L gad_fluxlimit_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_x.F gad_fluxlimit_adv_x.F; fi if [ ! -L gad_fluxlimit_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_y.F gad_fluxlimit_adv_y.F; fi if [ ! -L gad_fluxlimit_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_impl_r.F gad_fluxlimit_impl_r.F; fi if [ ! -L gad_grad_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_x.F gad_grad_x.F; fi if [ ! -L gad_grad_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_y.F gad_grad_y.F; fi if [ ! -L gad_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_implicit_r.F gad_implicit_r.F; fi if [ ! -L gad_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_fixed.F gad_init_fixed.F; fi if [ ! -L gad_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_varia.F gad_init_varia.F; fi if [ ! -L gad_os7mp_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_r.F gad_os7mp_adv_r.F; fi if [ ! -L gad_os7mp_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_x.F gad_os7mp_adv_x.F; fi if [ ! -L gad_os7mp_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_y.F gad_os7mp_adv_y.F; fi if [ ! -L gad_osc_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_r.F gad_osc_hat_r.F; fi if [ ! -L gad_osc_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_x.F gad_osc_hat_x.F; fi if [ ! -L gad_osc_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_y.F gad_osc_hat_y.F; fi if [ ! -L gad_osc_mul_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_r.F gad_osc_mul_r.F; fi if [ ! -L gad_osc_mul_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_x.F gad_osc_mul_x.F; fi if [ ! -L gad_osc_mul_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_y.F gad_osc_mul_y.F; fi if [ ! -L gad_plm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_plm_fun.F gad_plm_fun.F; fi if [ ! -L gad_ppm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_r.F gad_ppm_adv_r.F; fi if [ ! -L gad_ppm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_x.F gad_ppm_adv_x.F; fi if [ ! -L gad_ppm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_y.F gad_ppm_adv_y.F; fi if [ ! -L gad_ppm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_r.F gad_ppm_flx_r.F; fi if [ ! -L gad_ppm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_x.F gad_ppm_flx_x.F; fi if [ ! -L gad_ppm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_y.F gad_ppm_flx_y.F; fi if [ ! -L gad_ppm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_fun.F gad_ppm_fun.F; fi if [ ! -L gad_ppm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_r.F gad_ppm_hat_r.F; fi if [ ! -L gad_ppm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_x.F gad_ppm_hat_x.F; fi if [ ! -L gad_ppm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_y.F gad_ppm_hat_y.F; fi if [ ! -L gad_ppm_p3e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_r.F gad_ppm_p3e_r.F; fi if [ ! -L gad_ppm_p3e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_x.F gad_ppm_p3e_x.F; fi if [ ! -L gad_ppm_p3e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_y.F gad_ppm_p3e_y.F; fi if [ ! -L gad_pqm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_r.F gad_pqm_adv_r.F; fi if [ ! -L gad_pqm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_x.F gad_pqm_adv_x.F; fi if [ ! -L gad_pqm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_y.F gad_pqm_adv_y.F; fi if [ ! -L gad_pqm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_r.F gad_pqm_flx_r.F; fi if [ ! -L gad_pqm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_x.F gad_pqm_flx_x.F; fi if [ ! -L gad_pqm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_y.F gad_pqm_flx_y.F; fi if [ ! -L gad_pqm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_fun.F gad_pqm_fun.F; fi if [ ! -L gad_pqm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_r.F gad_pqm_hat_r.F; fi if [ ! -L gad_pqm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_x.F gad_pqm_hat_x.F; fi if [ ! -L gad_pqm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_y.F gad_pqm_hat_y.F; fi if [ ! -L gad_pqm_p5e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_r.F gad_pqm_p5e_r.F; fi if [ ! -L gad_pqm_p5e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_x.F gad_pqm_p5e_x.F; fi if [ ! -L gad_pqm_p5e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_y.F gad_pqm_p5e_y.F; fi if [ ! -L gad_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_read_pickup.F gad_read_pickup.F; fi if [ ! -L gad_som_advect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_advect.F gad_som_advect.F; fi if [ ! -L gad_som_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_r.F gad_som_adv_r.F; fi if [ ! -L gad_som_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_x.F gad_som_adv_x.F; fi if [ ! -L gad_som_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_y.F gad_som_adv_y.F; fi if [ ! -L gad_som_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_exchanges.F gad_som_exchanges.F; fi if [ ! -L gad_som_fill_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_fill_cs_corner.F gad_som_fill_cs_corner.F; fi if [ ! -L gad_som_lim_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_lim_r.F gad_som_lim_r.F; fi if [ ! -L gad_som_prep_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_prep_cs_corner.F gad_som_prep_cs_corner.F; fi if [ ! -L gad_u3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_r.F gad_u3_adv_r.F; fi if [ ! -L gad_u3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_x.F gad_u3_adv_x.F; fi if [ ! -L gad_u3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_y.F gad_u3_adv_y.F; fi if [ ! -L gad_u3c4_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3c4_impl_r.F gad_u3c4_impl_r.F; fi if [ ! -L gad_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_write_pickup.F gad_write_pickup.F; fi if [ ! -L salt_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/salt_fill.F salt_fill.F; fi if [ ! -L mdsio_buffertorl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertorl.F mdsio_buffertorl.F; fi if [ ! -L mdsio_buffertors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertors.F mdsio_buffertors.F; fi if [ ! -L mdsio_check4file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_check4file.F mdsio_check4file.F; fi if [ ! -L mdsio_facef_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_facef_read.F mdsio_facef_read.F; fi if [ ! -L mdsio_gl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl.F mdsio_gl.F; fi if [ ! -L mdsio_gl_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl_slice.F mdsio_gl_slice.F; fi if [ ! -L mdsio_pass_r4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4torl.F mdsio_pass_r4torl.F; fi if [ ! -L mdsio_pass_r4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4tors.F mdsio_pass_r4tors.F; fi if [ ! -L mdsio_pass_r8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8torl.F mdsio_pass_r8torl.F; fi if [ ! -L mdsio_pass_r8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8tors.F mdsio_pass_r8tors.F; fi if [ ! -L mdsio_rd_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rl.F mdsio_rd_rec_rl.F; fi if [ ! -L mdsio_rd_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rs.F mdsio_rd_rec_rs.F; fi if [ ! -L mdsio_read_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_field.F mdsio_read_field.F; fi if [ ! -L mdsio_read_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_meta.F mdsio_read_meta.F; fi if [ ! -L mdsio_read_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_section.F mdsio_read_section.F; fi if [ ! -L mdsio_read_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_tape.F mdsio_read_tape.F; fi if [ ! -L mdsio_readvec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_readvec_loc.F mdsio_readvec_loc.F; fi if [ ! -L mdsio_read_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_whalos.F mdsio_read_whalos.F; fi if [ ! -L mdsio_rw_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_field.F mdsio_rw_field.F; fi if [ ! -L mdsio_rw_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_slice.F mdsio_rw_slice.F; fi if [ ! -L mdsio_seg4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4torl.F mdsio_seg4torl.F; fi if [ ! -L mdsio_seg4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4tors.F mdsio_seg4tors.F; fi if [ ! -L mdsio_seg8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8torl.F mdsio_seg8torl.F; fi if [ ! -L mdsio_seg8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8tors.F mdsio_seg8tors.F; fi if [ ! -L mdsio_segxtorx_2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_segxtorx_2d.F mdsio_segxtorx_2d.F; fi if [ ! -L mdsio_write_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_field.F mdsio_write_field.F; fi if [ ! -L mdsio_writelocal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writelocal.F mdsio_writelocal.F; fi if [ ! -L mdsio_write_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_meta.F mdsio_write_meta.F; fi if [ ! -L mdsio_write_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_section.F mdsio_write_section.F; fi if [ ! -L mdsio_write_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_tape.F mdsio_write_tape.F; fi if [ ! -L mdsio_writevec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writevec_loc.F mdsio_writevec_loc.F; fi if [ ! -L mdsio_write_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_whalos.F mdsio_write_whalos.F; fi if [ ! -L mdsio_wr_metafiles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_metafiles.F mdsio_wr_metafiles.F; fi if [ ! -L mdsio_wr_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rl.F mdsio_wr_rec_rl.F; fi if [ ! -L mdsio_wr_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rs.F mdsio_wr_rec_rs.F; fi if [ ! -L mom_calc_3d_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_3d_strain.F mom_calc_3d_strain.F; fi if [ ! -L mom_calc_absvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_absvort3.F mom_calc_absvort3.F; fi if [ ! -L mom_calc_hdiv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hdiv.F mom_calc_hdiv.F; fi if [ ! -L mom_calc_hfacz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hfacz.F mom_calc_hfacz.F; fi if [ ! -L mom_calc_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_ke.F mom_calc_ke.F; fi if [ ! -L mom_calc_relvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_relvort3.F mom_calc_relvort3.F; fi if [ ! -L mom_calc_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_smag_3d.F mom_calc_smag_3d.F; fi if [ ! -L mom_calc_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_strain.F mom_calc_strain.F; fi if [ ! -L mom_calc_tension.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_tension.F mom_calc_tension.F; fi if [ ! -L mom_calc_visc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_visc.F mom_calc_visc.F; fi if [ ! -L mom_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_diagnostics_init.F mom_diagnostics_init.F; fi if [ ! -L mom_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_hdissip.F mom_hdissip.F; fi if [ ! -L mom_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_init_fixed.F mom_init_fixed.F; fi if [ ! -L mom_quasihydrostatic.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_quasihydrostatic.F mom_quasihydrostatic.F; fi if [ ! -L mom_u_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_botdrag_coeff.F mom_u_botdrag_coeff.F; fi if [ ! -L mom_u_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_coriolis_nh.F mom_u_coriolis_nh.F; fi if [ ! -L mom_u_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_implicit_r.F mom_u_implicit_r.F; fi if [ ! -L mom_u_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_metric_nh.F mom_u_metric_nh.F; fi if [ ! -L mom_u_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_rviscflux.F mom_u_rviscflux.F; fi if [ ! -L mom_u_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_sidedrag.F mom_u_sidedrag.F; fi if [ ! -L mom_uv_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_uv_smag_3d.F mom_uv_smag_3d.F; fi if [ ! -L mom_v_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_botdrag_coeff.F mom_v_botdrag_coeff.F; fi if [ ! -L mom_v_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_coriolis_nh.F mom_v_coriolis_nh.F; fi if [ ! -L mom_v_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_implicit_r.F mom_v_implicit_r.F; fi if [ ! -L mom_visc_qgl_limit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_limit.F mom_visc_qgl_limit.F; fi if [ ! -L mom_visc_qgl_stretch.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_stretch.F mom_visc_qgl_stretch.F; fi if [ ! -L mom_v_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_metric_nh.F mom_v_metric_nh.F; fi if [ ! -L mom_v_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_rviscflux.F mom_v_rviscflux.F; fi if [ ! -L mom_v_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_sidedrag.F mom_v_sidedrag.F; fi if [ ! -L mom_w_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_coriolis_nh.F mom_w_coriolis_nh.F; fi if [ ! -L mom_w_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_metric_nh.F mom_w_metric_nh.F; fi if [ ! -L mom_w_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_sidedrag.F mom_w_sidedrag.F; fi if [ ! -L mom_w_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_smag_3d.F mom_w_smag_3d.F; fi if [ ! -L mom_calc_rtrans.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_calc_rtrans.F mom_calc_rtrans.F; fi if [ ! -L mom_fluxform.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_fluxform.F mom_fluxform.F; fi if [ ! -L mom_u_adv_uu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_uu.F mom_u_adv_uu.F; fi if [ ! -L mom_u_adv_vu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_vu.F mom_u_adv_vu.F; fi if [ ! -L mom_u_adv_wu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_wu.F mom_u_adv_wu.F; fi if [ ! -L mom_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_coriolis.F mom_u_coriolis.F; fi if [ ! -L mom_u_del2u.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_del2u.F mom_u_del2u.F; fi if [ ! -L mom_u_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_cylinder.F mom_u_metric_cylinder.F; fi if [ ! -L mom_u_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_sphere.F mom_u_metric_sphere.F; fi if [ ! -L mom_uv_boundary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_uv_boundary.F mom_uv_boundary.F; fi if [ ! -L mom_u_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_xviscflux.F mom_u_xviscflux.F; fi if [ ! -L mom_u_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_yviscflux.F mom_u_yviscflux.F; fi if [ ! -L mom_v_adv_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_uv.F mom_v_adv_uv.F; fi if [ ! -L mom_v_adv_vv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_vv.F mom_v_adv_vv.F; fi if [ ! -L mom_v_adv_wv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_wv.F mom_v_adv_wv.F; fi if [ ! -L mom_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_coriolis.F mom_v_coriolis.F; fi if [ ! -L mom_v_del2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_del2v.F mom_v_del2v.F; fi if [ ! -L mom_v_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_cylinder.F mom_v_metric_cylinder.F; fi if [ ! -L mom_v_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_sphere.F mom_v_metric_sphere.F; fi if [ ! -L mom_v_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_xviscflux.F mom_v_xviscflux.F; fi if [ ! -L mom_v_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_yviscflux.F mom_v_yviscflux.F; fi if [ ! -L mom_vecinv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vecinv.F mom_vecinv.F; fi if [ ! -L mom_vi_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_coriolis.F mom_vi_coriolis.F; fi if [ ! -L mom_vi_del2uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_del2uv.F mom_vi_del2uv.F; fi if [ ! -L mom_vi_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_hdissip.F mom_vi_hdissip.F; fi if [ ! -L mom_vi_u_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F mom_vi_u_coriolis_c4.F; fi if [ ! -L mom_vi_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis.F mom_vi_u_coriolis.F; fi if [ ! -L mom_vi_u_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_grad_ke.F mom_vi_u_grad_ke.F; fi if [ ! -L mom_vi_u_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_vertshear.F mom_vi_u_vertshear.F; fi if [ ! -L mom_vi_v_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F mom_vi_v_coriolis_c4.F; fi if [ ! -L mom_vi_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis.F mom_vi_v_coriolis.F; fi if [ ! -L mom_vi_v_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_grad_ke.F mom_vi_v_grad_ke.F; fi if [ ! -L mom_vi_v_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_vertshear.F mom_vi_v_vertshear.F; fi if [ ! -L mon_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcfl.F mon_advcfl.F; fi if [ ! -L mon_advcflw2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw2.F mon_advcflw2.F; fi if [ ! -L mon_advcflw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw.F mon_advcflw.F; fi if [ ! -L mon_calc_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_advcfl.F mon_calc_advcfl.F; fi if [ ! -L mon_calc_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rl.F mon_calc_stats_rl.F; fi if [ ! -L mon_calc_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rs.F mon_calc_stats_rs.F; fi if [ ! -L mon_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_init.F mon_init.F; fi if [ ! -L monitor_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_ad.F monitor_ad.F; fi if [ ! -L monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor.F monitor.F; fi if [ ! -L monitor_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_g.F monitor_g.F; fi if [ ! -L mon_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_ke.F mon_ke.F; fi if [ ! -L mon_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_out.F mon_out.F; fi if [ ! -L mon_printstats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rl.F mon_printstats_rl.F; fi if [ ! -L mon_printstats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rs.F mon_printstats_rs.F; fi if [ ! -L mon_set_iounit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_iounit.F mon_set_iounit.F; fi if [ ! -L mon_set_pref.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_pref.F mon_set_pref.F; fi if [ ! -L mon_solution.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_solution.F mon_solution.F; fi if [ ! -L mon_stats_latbnd_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_latbnd_rl.F mon_stats_latbnd_rl.F; fi if [ ! -L mon_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rl.F mon_stats_rl.F; fi if [ ! -L mon_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rs.F mon_stats_rs.F; fi if [ ! -L mon_surfcor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_surfcor.F mon_surfcor.F; fi if [ ! -L mon_vort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_vort3.F mon_vort3.F; fi if [ ! -L mon_writestats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rl.F mon_writestats_rl.F; fi if [ ! -L mon_writestats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rs.F mon_writestats_rs.F; fi if [ ! -L obcs_add_tides.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_add_tides.F obcs_add_tides.F; fi if [ ! -L obcs_adjust.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust.F obcs_adjust.F; fi if [ ! -L obcs_adjust_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust_uvice.F obcs_adjust_uvice.F; fi if [ ! -L obcs_apply_eta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_eta.F obcs_apply_eta.F; fi if [ ! -L obcs_apply_ptracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ptracer.F obcs_apply_ptracer.F; fi if [ ! -L obcs_apply_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_r_star.F obcs_apply_r_star.F; fi if [ ! -L obcs_apply_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_seaice.F obcs_apply_seaice.F; fi if [ ! -L obcs_apply_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_surf_dr.F obcs_apply_surf_dr.F; fi if [ ! -L obcs_apply_ts.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ts.F obcs_apply_ts.F; fi if [ ! -L obcs_apply_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uv.F obcs_apply_uv.F; fi if [ ! -L obcs_apply_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uvice.F obcs_apply_uvice.F; fi if [ ! -L obcs_apply_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_w.F obcs_apply_w.F; fi if [ ! -L obcs_balance_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_balance_flow.F obcs_balance_flow.F; fi if [ ! -L obcs_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc.F obcs_calc.F; fi if [ ! -L obcs_calc_stevens.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc_stevens.F obcs_calc_stevens.F; fi if [ ! -L obcs_check_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check_depths.F obcs_check_depths.F; fi if [ ! -L obcs_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check.F obcs_check.F; fi if [ ! -L obcs_copy_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_tracer.F obcs_copy_tracer.F; fi if [ ! -L obcs_copy_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_uv_n.F obcs_copy_uv_n.F; fi if [ ! -L obcs_diag_balance.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_diag_balance.F obcs_diag_balance.F; fi if [ ! -L obcs_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exchanges.F obcs_exchanges.F; fi if [ ! -L obcs_exf_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exf_load.F obcs_exf_load.F; fi if [ ! -L obcs_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_fields_load.F obcs_fields_load.F; fi if [ ! -L obcs_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_fixed.F obcs_init_fixed.F; fi if [ ! -L obcs_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_variables.F obcs_init_variables.F; fi if [ ! -L obcs_monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_monitor.F obcs_monitor.F; fi if [ ! -L obcs_mon_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_mon_stats.F obcs_mon_stats.F; fi if [ ! -L obcs_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_output.F obcs_output.F; fi if [ ! -L obcs_prescribe_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_prescribe_read.F obcs_prescribe_read.F; fi if [ ! -L obcs_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_readparms.F obcs_readparms.F; fi if [ ! -L obcs_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_read_pickup.F obcs_read_pickup.F; fi if [ ! -L obcs_save_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_save_uv_n.F obcs_save_uv_n.F; fi if [ ! -L obcs_seaice_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_seaice_sponge.F obcs_seaice_sponge.F; fi if [ ! -L obcs_set_connect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_set_connect.F obcs_set_connect.F; fi if [ ! -L obcs_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_sponge.F obcs_sponge.F; fi if [ ! -L obcs_u1_adv_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_u1_adv_tracer.F obcs_u1_adv_tracer.F; fi if [ ! -L obcs_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_write_pickup.F obcs_write_pickup.F; fi if [ ! -L orlanski_east.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_east.F orlanski_east.F; fi if [ ! -L orlanski_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_init.F orlanski_init.F; fi if [ ! -L orlanski_north.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_north.F orlanski_north.F; fi if [ ! -L orlanski_south.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_south.F orlanski_south.F; fi if [ ! -L orlanski_west.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_west.F orlanski_west.F; fi if [ ! -L get_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/get_write_global_fld.F get_write_global_fld.F; fi if [ ! -L read_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rl.F read_fld_xy_rl.F; fi if [ ! -L read_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rs.F read_fld_xy_rs.F; fi if [ ! -L read_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rl.F read_fld_xyz_rl.F; fi if [ ! -L read_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rs.F read_fld_xyz_rs.F; fi if [ ! -L read_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rl.F read_glvec_rl.F; fi if [ ! -L read_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rs.F read_glvec_rs.F; fi if [ ! -L read_mflds.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_mflds.F read_mflds.F; fi if [ ! -L read_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_rec.F read_rec.F; fi if [ ! -L rw_get_suffix.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/rw_get_suffix.F rw_get_suffix.F; fi if [ ! -L set_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/set_write_global_fld.F set_write_global_fld.F; fi if [ ! -L write_fld_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rl.F write_fld_3d_rl.F; fi if [ ! -L write_fld_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rs.F write_fld_3d_rs.F; fi if [ ! -L write_fld_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rl.F write_fld_s3d_rl.F; fi if [ ! -L write_fld_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rs.F write_fld_s3d_rs.F; fi if [ ! -L write_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rl.F write_fld_xy_rl.F; fi if [ ! -L write_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rs.F write_fld_xy_rs.F; fi if [ ! -L write_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rl.F write_fld_xyz_rl.F; fi if [ ! -L write_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rs.F write_fld_xyz_rs.F; fi if [ ! -L write_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rl.F write_glvec_rl.F; fi if [ ! -L write_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rs.F write_glvec_rs.F; fi if [ ! -L write_local_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rl.F write_local_rl.F; fi if [ ! -L write_local_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rs.F write_local_rs.F; fi if [ ! -L write_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_rec.F write_rec.F; fi if [ ! -L shelfice_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_check.F shelfice_check.F; fi if [ ! -L shelfice_cost_accumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_accumulate.F shelfice_cost_accumulate.F; fi if [ ! -L shelfice_cost_final.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_final.F shelfice_cost_final.F; fi if [ ! -L shelfice_cost_shifwflx.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_shifwflx.F shelfice_cost_shifwflx.F; fi if [ ! -L shelfice_diagnostics_drag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_diagnostics_drag.F shelfice_diagnostics_drag.F; fi if [ ! -L shelfice_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing.F shelfice_forcing.F; fi if [ ! -L shelfice_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing_surf.F shelfice_forcing_surf.F; fi if [ ! -L shelfice_init_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_depths.F shelfice_init_depths.F; fi if [ ! -L shelfice_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_fixed.F shelfice_init_fixed.F; fi if [ ! -L shelfice_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_varia.F shelfice_init_varia.F; fi if [ ! -L shelfice_mask_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mask_seaice.F shelfice_mask_seaice.F; fi if [ ! -L shelfice_mnc_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mnc_init.F shelfice_mnc_init.F; fi if [ ! -L shelfice_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_output.F shelfice_output.F; fi if [ ! -L shelfice_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_readparms.F shelfice_readparms.F; fi if [ ! -L shelfice_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_read_pickup.F shelfice_read_pickup.F; fi if [ ! -L shelfice_remesh_calc_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_calc_w.F shelfice_remesh_calc_w.F; fi if [ ! -L shelfice_remesh_c_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_c_mask.F shelfice_remesh_c_mask.F; fi if [ ! -L shelfice_remeshing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remeshing.F shelfice_remeshing.F; fi if [ ! -L shelfice_remesh_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_state.F shelfice_remesh_state.F; fi if [ ! -L shelfice_remesh_uv_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_uv_mask.F shelfice_remesh_uv_mask.F; fi if [ ! -L shelfice_step_icemass.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_step_icemass.F shelfice_step_icemass.F; fi if [ ! -L shelfice_thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_thermodynamics.F shelfice_thermodynamics.F; fi if [ ! -L shelfice_u_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_u_drag_coeff.F shelfice_u_drag_coeff.F; fi if [ ! -L shelfice_v_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_v_drag_coeff.F shelfice_v_drag_coeff.F; fi if [ ! -L shelfice_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_write_pickup.F shelfice_write_pickup.F; fi if [ ! -L timeave_cumul_1k1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1k1t.F timeave_cumul_1k1t.F; fi if [ ! -L timeave_cumul_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1t.F timeave_cumul_1t.F; fi if [ ! -L timeave_cumul_1vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1vfc.F timeave_cumul_1vfc.F; fi if [ ! -L timeave_cumul_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2v.F timeave_cumul_2v.F; fi if [ ! -L timeave_cumul_2vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2vfc.F timeave_cumul_2vfc.F; fi if [ ! -L timeave_cumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumulate.F timeave_cumulate.F; fi if [ ! -L timeave_cumul_dif_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_dif_1t.F timeave_cumul_dif_1t.F; fi if [ ! -L timeave_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_init_fixed.F timeave_init_fixed.F; fi if [ ! -L timeave_norma_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_norma_2v.F timeave_norma_2v.F; fi if [ ! -L timeave_normalize.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_normalize.F timeave_normalize.F; fi if [ ! -L timeave_reset.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_reset.F timeave_reset.F; fi if [ ! -L timeave_statvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statvars.F timeave_statvars.F; fi if [ ! -L timeave_statv_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statv_write.F timeave_statv_write.F; fi if [ ! -L timeave_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_surf_flux.F timeave_surf_flux.F; fi if [ ! -L all_proc_die.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/all_proc_die.F all_proc_die.F; fi if [ ! -L bar2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar2.F bar2.F; fi if [ ! -L bar_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar_check.F bar_check.F; fi if [ ! -L barrier.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/barrier.F barrier.F; fi if [ ! -L check_threads.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/check_threads.F check_threads.F; fi if [ ! -L comm_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/comm_stats.F comm_stats.F; fi if [ ! -L cumulsum_z_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/cumulsum_z_tile.F cumulsum_z_tile.F; fi if [ ! -L different_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/different_multiple.F different_multiple.F; fi if [ ! -L diff_phase_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/diff_phase_multiple.F diff_phase_multiple.F; fi if [ ! -L eeboot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeboot.F eeboot.F; fi if [ ! -L eedata_example.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eedata_example.F eedata_example.F; fi if [ ! -L eeintro_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeintro_msg.F eeintro_msg.F; fi if [ ! -L eeset_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeset_parms.F eeset_parms.F; fi if [ ! -L eewrite_eeenv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eewrite_eeenv.F eewrite_eeenv.F; fi if [ ! -L exch0_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r4.F exch0_r4.F; fi if [ ! -L exch0_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r8.F exch0_r8.F; fi if [ ! -L exch0_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rl.F exch0_rl.F; fi if [ ! -L exch0_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rs.F exch0_rs.F; fi if [ ! -L exch1_bg_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r4_cube.F exch1_bg_r4_cube.F; fi if [ ! -L exch1_bg_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r8_cube.F exch1_bg_r8_cube.F; fi if [ ! -L exch1_bg_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rl_cube.F exch1_bg_rl_cube.F; fi if [ ! -L exch1_bg_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rs_cube.F exch1_bg_rs_cube.F; fi if [ ! -L exch1_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4_cube.F exch1_r4_cube.F; fi if [ ! -L exch1_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4.F exch1_r4.F; fi if [ ! -L exch1_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8_cube.F exch1_r8_cube.F; fi if [ ! -L exch1_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8.F exch1_r8.F; fi if [ ! -L exch1_rl_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_ad.F exch1_rl_ad.F; fi if [ ! -L exch1_rl_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube_ad.F exch1_rl_cube_ad.F; fi if [ ! -L exch1_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube.F exch1_rl_cube.F; fi if [ ! -L exch1_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl.F exch1_rl.F; fi if [ ! -L exch1_rs_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_ad.F exch1_rs_ad.F; fi if [ ! -L exch1_rs_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube_ad.F exch1_rs_cube_ad.F; fi if [ ! -L exch1_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube.F exch1_rs_cube.F; fi if [ ! -L exch1_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs.F exch1_rs.F; fi if [ ! -L exch1_uv_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r4_cube.F exch1_uv_r4_cube.F; fi if [ ! -L exch1_uv_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r8_cube.F exch1_uv_r8_cube.F; fi if [ ! -L exch1_uv_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rl_cube.F exch1_uv_rl_cube.F; fi if [ ! -L exch1_uv_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rs_cube.F exch1_uv_rs_cube.F; fi if [ ! -L exch1_z_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r4_cube.F exch1_z_r4_cube.F; fi if [ ! -L exch1_z_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r8_cube.F exch1_z_r8_cube.F; fi if [ ! -L exch1_z_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rl_cube.F exch1_z_rl_cube.F; fi if [ ! -L exch1_z_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rs_cube.F exch1_z_rs_cube.F; fi if [ ! -L exch_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r4.F exch_3d_r4.F; fi if [ ! -L exch_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r8.F exch_3d_r8.F; fi if [ ! -L exch_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rl.F exch_3d_rl.F; fi if [ ! -L exch_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rs.F exch_3d_rs.F; fi if [ ! -L exch_cycle_ebl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_cycle_ebl.F exch_cycle_ebl.F; fi if [ ! -L exch_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_init.F exch_init.F; fi if [ ! -L exch_r4_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_x.F exch_r4_recv_get_x.F; fi if [ ! -L exch_r4_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_y.F exch_r4_recv_get_y.F; fi if [ ! -L exch_r4_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_x.F exch_r4_send_put_x.F; fi if [ ! -L exch_r4_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_y.F exch_r4_send_put_y.F; fi if [ ! -L exch_r8_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_x.F exch_r8_recv_get_x.F; fi if [ ! -L exch_r8_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_y.F exch_r8_recv_get_y.F; fi if [ ! -L exch_r8_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_x.F exch_r8_send_put_x.F; fi if [ ! -L exch_r8_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_y.F exch_r8_send_put_y.F; fi if [ ! -L exch_rl_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_x.F exch_rl_recv_get_x.F; fi if [ ! -L exch_rl_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_y.F exch_rl_recv_get_y.F; fi if [ ! -L exch_rl_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_x.F exch_rl_send_put_x.F; fi if [ ! -L exch_rl_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_y.F exch_rl_send_put_y.F; fi if [ ! -L exch_rs_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_x.F exch_rs_recv_get_x.F; fi if [ ! -L exch_rs_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_y.F exch_rs_recv_get_y.F; fi if [ ! -L exch_rs_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_x.F exch_rs_send_put_x.F; fi if [ ! -L exch_rs_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_y.F exch_rs_send_put_y.F; fi if [ ! -L exch_s3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r4.F exch_s3d_r4.F; fi if [ ! -L exch_s3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r8.F exch_s3d_r8.F; fi if [ ! -L exch_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rl.F exch_s3d_rl.F; fi if [ ! -L exch_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rs.F exch_s3d_rs.F; fi if [ ! -L exch_sm_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r4.F exch_sm_3d_r4.F; fi if [ ! -L exch_sm_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r8.F exch_sm_3d_r8.F; fi if [ ! -L exch_sm_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rl.F exch_sm_3d_rl.F; fi if [ ! -L exch_sm_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rs.F exch_sm_3d_rs.F; fi if [ ! -L exch_uv_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r4.F exch_uv_3d_r4.F; fi if [ ! -L exch_uv_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r8.F exch_uv_3d_r8.F; fi if [ ! -L exch_uv_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rl.F exch_uv_3d_rl.F; fi if [ ! -L exch_uv_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rs.F exch_uv_3d_rs.F; fi if [ ! -L exch_uv_agrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r4.F; fi if [ ! -L exch_uv_agrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_r8.F; fi if [ ! -L exch_uv_agrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rl.F; fi if [ ! -L exch_uv_agrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rs.F exch_uv_agrid_3d_rs.F; fi if [ ! -L exch_uv_bgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r4.F; fi if [ ! -L exch_uv_bgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_r8.F; fi if [ ! -L exch_uv_bgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rl.F; fi if [ ! -L exch_uv_bgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rs.F exch_uv_bgrid_3d_rs.F; fi if [ ! -L exch_uv_dgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r4.F; fi if [ ! -L exch_uv_dgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_r8.F; fi if [ ! -L exch_uv_dgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rl.F; fi if [ ! -L exch_uv_dgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rs.F exch_uv_dgrid_3d_rs.F; fi if [ ! -L exch_uv_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r4.F exch_uv_xy_r4.F; fi if [ ! -L exch_uv_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r8.F exch_uv_xy_r8.F; fi if [ ! -L exch_uv_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rl.F exch_uv_xy_rl.F; fi if [ ! -L exch_uv_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rs.F exch_uv_xy_rs.F; fi if [ ! -L exch_uv_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r4.F exch_uv_xyz_r4.F; fi if [ ! -L exch_uv_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r8.F exch_uv_xyz_r8.F; fi if [ ! -L exch_uv_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rl.F exch_uv_xyz_rl.F; fi if [ ! -L exch_uv_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rs.F exch_uv_xyz_rs.F; fi if [ ! -L exch_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r4.F exch_xy_r4.F; fi if [ ! -L exch_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r8.F exch_xy_r8.F; fi if [ ! -L exch_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rl.F exch_xy_rl.F; fi if [ ! -L exch_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rs.F exch_xy_rs.F; fi if [ ! -L exch_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r4.F exch_xyz_r4.F; fi if [ ! -L exch_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r8.F exch_xyz_r8.F; fi if [ ! -L exch_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rl.F exch_xyz_rl.F; fi if [ ! -L exch_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rs.F exch_xyz_rs.F; fi if [ ! -L exch_z_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r4.F exch_z_3d_r4.F; fi if [ ! -L exch_z_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r8.F exch_z_3d_r8.F; fi if [ ! -L exch_z_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rl.F exch_z_3d_rl.F; fi if [ ! -L exch_z_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rs.F exch_z_3d_rs.F; fi if [ ! -L fill_cs_corner_ag_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_ag_rl.F fill_cs_corner_ag_rl.F; fi if [ ! -L fill_cs_corner_tr_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_tr_rl.F fill_cs_corner_tr_rl.F; fi if [ ! -L fill_cs_corner_uv_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rl.F fill_cs_corner_uv_rl.F; fi if [ ! -L fill_cs_corner_uv_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rs.F fill_cs_corner_uv_rs.F; fi if [ ! -L fool_the_compiler.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fool_the_compiler.F fool_the_compiler.F; fi if [ ! -L gather_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r4.F gather_2d_r4.F; fi if [ ! -L gather_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r8.F gather_2d_r8.F; fi if [ ! -L gather_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r4.F gather_2d_wh_r4.F; fi if [ ! -L gather_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r8.F gather_2d_wh_r8.F; fi if [ ! -L gather_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r4.F gather_vec_r4.F; fi if [ ! -L gather_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r8.F gather_vec_r8.F; fi if [ ! -L gather_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_xz.F gather_xz.F; fi if [ ! -L gather_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_yz.F gather_yz.F; fi if [ ! -L get_periodic_interval.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/get_periodic_interval.F get_periodic_interval.F; fi if [ ! -L global_max.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_max.F global_max.F; fi if [ ! -L global_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum.F global_sum.F; fi if [ ! -L global_sum_singlecpu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_singlecpu.F global_sum_singlecpu.F; fi if [ ! -L global_sum_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_tile.F global_sum_tile.F; fi if [ ! -L global_vec_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_vec_sum.F global_vec_sum.F; fi if [ ! -L gsum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsum.F gsum.F; fi if [ ! -L ini_communication_patterns.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_communication_patterns.F ini_communication_patterns.F; fi if [ ! -L ini_procs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_procs.F ini_procs.F; fi if [ ! -L ini_threading_environment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_threading_environment.F ini_threading_environment.F; fi if [ ! -L lef_zero.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/lef_zero.F lef_zero.F; fi if [ ! -L main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/main.F main.F; fi if [ ! -L master_cpu_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_io.F master_cpu_io.F; fi if [ ! -L master_cpu_thread.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_thread.F master_cpu_thread.F; fi if [ ! -L mds_byteswapi4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapi4.F mds_byteswapi4.F; fi if [ ! -L mds_byteswapr4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr4.F mds_byteswapr4.F; fi if [ ! -L mds_byteswapr8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr8.F mds_byteswapr8.F; fi if [ ! -L mdsfindunit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mdsfindunit.F mdsfindunit.F; fi if [ ! -L mds_flush.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_flush.F mds_flush.F; fi if [ ! -L mds_reclen.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_reclen.F mds_reclen.F; fi if [ ! -L memsync.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/memsync.F memsync.F; fi if [ ! -L nml_change_syntax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_change_syntax.F nml_change_syntax.F; fi if [ ! -L nml_set_terminator.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_set_terminator.F nml_set_terminator.F; fi if [ ! -L open_copy_data_file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/open_copy_data_file.F open_copy_data_file.F; fi if [ ! -L print.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/print.F print.F; fi if [ ! -L reset_halo.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/reset_halo.F reset_halo.F; fi if [ ! -L scatter_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r4.F scatter_2d_r4.F; fi if [ ! -L scatter_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r8.F scatter_2d_r8.F; fi if [ ! -L scatter_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r4.F scatter_2d_wh_r4.F; fi if [ ! -L scatter_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r8.F scatter_2d_wh_r8.F; fi if [ ! -L scatter_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r4.F scatter_vec_r4.F; fi if [ ! -L scatter_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r8.F scatter_vec_r8.F; fi if [ ! -L scatter_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_xz.F scatter_xz.F; fi if [ ! -L scatter_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_yz.F scatter_yz.F; fi if [ ! -L stop_if_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/stop_if_error.F stop_if_error.F; fi if [ ! -L timers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timers.F timers.F; fi if [ ! -L utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/utils.F utils.F; fi if [ ! -L write_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/write_utils.F write_utils.F; fi if [ ! -L adams_bashforth2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth2.F adams_bashforth2.F; fi if [ ! -L adams_bashforth3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth3.F adams_bashforth3.F; fi if [ ! -L add_walls2masks.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/add_walls2masks.F add_walls2masks.F; fi if [ ! -L apply_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/apply_forcing.F apply_forcing.F; fi if [ ! -L calc_3d_diffusivity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_3d_diffusivity.F calc_3d_diffusivity.F; fi if [ ! -L calc_adv_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_adv_flow.F calc_adv_flow.F; fi if [ ! -L calc_div_ghat.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_div_ghat.F calc_div_ghat.F; fi if [ ! -L calc_eddy_stress.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_eddy_stress.F calc_eddy_stress.F; fi if [ ! -L calc_grad_phi_fv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_fv.F calc_grad_phi_fv.F; fi if [ ! -L calc_grad_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_hyd.F calc_grad_phi_hyd.F; fi if [ ! -L calc_grad_phi_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_surf.F calc_grad_phi_surf.F; fi if [ ! -L calc_grid_angles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grid_angles.F calc_grid_angles.F; fi if [ ! -L calc_gw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_gw.F calc_gw.F; fi if [ ! -L calc_ivdc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_ivdc.F calc_ivdc.F; fi if [ ! -L calc_oce_mxlayer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_oce_mxlayer.F calc_oce_mxlayer.F; fi if [ ! -L calc_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_phi_hyd.F calc_phi_hyd.F; fi if [ ! -L calc_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_r_star.F calc_r_star.F; fi if [ ! -L calc_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_surf_dr.F calc_surf_dr.F; fi if [ ! -L calc_viscosity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_viscosity.F calc_viscosity.F; fi if [ ! -L calc_wsurf_tr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_wsurf_tr.F calc_wsurf_tr.F; fi if [ ! -L cg2d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_ex0.F cg2d_ex0.F; fi if [ ! -L cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d.F cg2d.F; fi if [ ! -L cg2d_nsa.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_nsa.F cg2d_nsa.F; fi if [ ! -L cg2d_sr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_sr.F cg2d_sr.F; fi if [ ! -L cg3d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d_ex0.F cg3d_ex0.F; fi if [ ! -L cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d.F cg3d.F; fi if [ ! -L check_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/check_pickup.F check_pickup.F; fi if [ ! -L config_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_check.F config_check.F; fi if [ ! -L config_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_summary.F config_summary.F; fi if [ ! -L convective_adjustment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment.F convective_adjustment.F; fi if [ ! -L convective_adjustment_ini.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment_ini.F convective_adjustment_ini.F; fi if [ ! -L convectively_mixtracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convectively_mixtracer.F convectively_mixtracer.F; fi if [ ! -L convective_weights.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_weights.F convective_weights.F; fi if [ ! -L correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/correction_step.F correction_step.F; fi if [ ! -L cycle_ab_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_ab_tracer.F cycle_ab_tracer.F; fi if [ ! -L cycle_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_tracer.F cycle_tracer.F; fi if [ ! -L diags_oceanic_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_oceanic_surf_flux.F diags_oceanic_surf_flux.F; fi if [ ! -L diags_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_hyd.F diags_phi_hyd.F; fi if [ ! -L diags_phi_rlow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_rlow.F diags_phi_rlow.F; fi if [ ! -L diags_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_rho.F diags_rho.F; fi if [ ! -L diags_sound_speed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_sound_speed.F diags_sound_speed.F; fi if [ ! -L do_atmospheric_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_atmospheric_phys.F do_atmospheric_phys.F; fi if [ ! -L do_fields_blocking_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_fields_blocking_exchanges.F do_fields_blocking_exchanges.F; fi if [ ! -L do_stagger_fields_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_stagger_fields_exchanges.F do_stagger_fields_exchanges.F; fi if [ ! -L do_statevars_diags.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_diags.F do_statevars_diags.F; fi if [ ! -L do_statevars_tave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_tave.F do_statevars_tave.F; fi if [ ! -L do_the_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_the_model_io.F do_the_model_io.F; fi if [ ! -L do_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_write_pickup.F do_write_pickup.F; fi if [ ! -L dynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/dynamics.F dynamics.F; fi if [ ! -L external_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_fields_load.F external_fields_load.F; fi if [ ! -L external_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing.F external_forcing.F; fi if [ ! -L external_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing_surf.F external_forcing_surf.F; fi if [ ! -L find_alpha.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_alpha.F find_alpha.F; fi if [ ! -L find_hyd_press_1d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_hyd_press_1d.F find_hyd_press_1d.F; fi if [ ! -L find_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_rho.F find_rho.F; fi if [ ! -L forcing_surf_relax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forcing_surf_relax.F forcing_surf_relax.F; fi if [ ! -L forward_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forward_step.F forward_step.F; fi if [ ! -L freesurf_rescale_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freesurf_rescale_g.F freesurf_rescale_g.F; fi if [ ! -L freeze_surface.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freeze_surface.F freeze_surface.F; fi if [ ! -L grad_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/grad_sigma.F grad_sigma.F; fi if [ ! -L gsw_teos10.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/gsw_teos10.F gsw_teos10.F; fi if [ ! -L impldiff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/impldiff.F impldiff.F; fi if [ ! -L ini_cartesian_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cartesian_grid.F ini_cartesian_grid.F; fi if [ ! -L ini_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg2d.F ini_cg2d.F; fi if [ ! -L ini_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg3d.F ini_cg3d.F; fi if [ ! -L ini_cori.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cori.F ini_cori.F; fi if [ ! -L ini_curvilinear_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_curvilinear_grid.F ini_curvilinear_grid.F; fi if [ ! -L ini_cylinder_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cylinder_grid.F ini_cylinder_grid.F; fi if [ ! -L ini_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_depths.F ini_depths.F; fi if [ ! -L ini_dynvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_dynvars.F ini_dynvars.F; fi if [ ! -L ini_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_eos.F ini_eos.F; fi if [ ! -L ini_ffields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_ffields.F ini_ffields.F; fi if [ ! -L ini_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_fields.F ini_fields.F; fi if [ ! -L ini_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_forcing.F ini_forcing.F; fi if [ ! -L ini_global_domain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_global_domain.F ini_global_domain.F; fi if [ ! -L ini_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_grid.F ini_grid.F; fi if [ ! -L ini_linear_phisurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_linear_phisurf.F ini_linear_phisurf.F; fi if [ ! -L ini_local_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_local_grid.F ini_local_grid.F; fi if [ ! -L ini_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_masks_etc.F ini_masks_etc.F; fi if [ ! -L ini_mixing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mixing.F ini_mixing.F; fi if [ ! -L ini_mnc_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mnc_vars.F ini_mnc_vars.F; fi if [ ! -L ini_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_model_io.F ini_model_io.F; fi if [ ! -L ini_nh_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_fields.F ini_nh_fields.F; fi if [ ! -L ini_nh_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_vars.F ini_nh_vars.F; fi if [ ! -L ini_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nlfs_vars.F ini_nlfs_vars.F; fi if [ ! -L ini_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_parms.F ini_parms.F; fi if [ ! -L ini_p_ground.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_p_ground.F ini_p_ground.F; fi if [ ! -L ini_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_pressure.F ini_pressure.F; fi if [ ! -L ini_psurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_psurf.F ini_psurf.F; fi if [ ! -L ini_salt.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_salt.F ini_salt.F; fi if [ ! -L ini_sigma_hfac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_sigma_hfac.F ini_sigma_hfac.F; fi if [ ! -L ini_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_spherical_polar_grid.F ini_spherical_polar_grid.F; fi if [ ! -L ini_theta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_theta.F ini_theta.F; fi if [ ! -L initialise_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_fixed.F initialise_fixed.F; fi if [ ! -L initialise_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_varia.F initialise_varia.F; fi if [ ! -L ini_vel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vel.F ini_vel.F; fi if [ ! -L ini_vertical_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vertical_grid.F ini_vertical_grid.F; fi if [ ! -L integrate_for_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integrate_for_w.F integrate_for_w.F; fi if [ ! -L integr_continuity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integr_continuity.F integr_continuity.F; fi if [ ! -L load_fields_driver.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_fields_driver.F load_fields_driver.F; fi if [ ! -L load_grid_spacing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_grid_spacing.F load_grid_spacing.F; fi if [ ! -L load_ref_files.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_ref_files.F load_ref_files.F; fi if [ ! -L main_do_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/main_do_loop.F main_do_loop.F; fi if [ ! -L momentum_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/momentum_correction_step.F momentum_correction_step.F; fi if [ ! -L packages_boot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_boot.F packages_boot.F; fi if [ ! -L packages_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_check.F packages_check.F; fi if [ ! -L packages_error_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_error_msg.F packages_error_msg.F; fi if [ ! -L packages_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_fixed.F packages_init_fixed.F; fi if [ ! -L packages_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_variables.F packages_init_variables.F; fi if [ ! -L packages_print_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_print_msg.F packages_print_msg.F; fi if [ ! -L packages_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_readparms.F packages_readparms.F; fi if [ ! -L packages_unused_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_unused_msg.F packages_unused_msg.F; fi if [ ! -L packages_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_write_pickup.F packages_write_pickup.F; fi if [ ! -L plot_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/plot_field.F plot_field.F; fi if [ ! -L port_rand.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/port_rand.F port_rand.F; fi if [ ! -L post_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/post_cg3d.F post_cg3d.F; fi if [ ! -L pre_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pre_cg3d.F pre_cg3d.F; fi if [ ! -L pressure_for_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pressure_for_eos.F pressure_for_eos.F; fi if [ ! -L read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/read_pickup.F read_pickup.F; fi if [ ! -L remove_mean.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/remove_mean.F remove_mean.F; fi if [ ! -L reset_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/reset_nlfs_vars.F reset_nlfs_vars.F; fi if [ ! -L rotate_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_spherical_polar_grid.F rotate_spherical_polar_grid.F; fi if [ ! -L rotate_uv2en.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_uv2en.F rotate_uv2en.F; fi if [ ! -L salt_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/salt_integrate.F salt_integrate.F; fi if [ ! -L seawater.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/seawater.F seawater.F; fi if [ ! -L set_defaults.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_defaults.F set_defaults.F; fi if [ ! -L set_grid_factors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_grid_factors.F set_grid_factors.F; fi if [ ! -L set_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_parms.F set_parms.F; fi if [ ! -L set_ref_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_ref_state.F set_ref_state.F; fi if [ ! -L solve_for_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_for_pressure.F solve_for_pressure.F; fi if [ ! -L solve_pentadiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_pentadiagonal.F solve_pentadiagonal.F; fi if [ ! -L solve_tridiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_tridiagonal.F solve_tridiagonal.F; fi if [ ! -L solve_uv_tridiago.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_uv_tridiago.F solve_uv_tridiago.F; fi if [ ! -L state_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/state_summary.F state_summary.F; fi if [ ! -L swfrac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/swfrac.F swfrac.F; fi if [ ! -L taueddy_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_init_varia.F taueddy_init_varia.F; fi if [ ! -L taueddy_tendency_apply.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_tendency_apply.F taueddy_tendency_apply.F; fi if [ ! -L temp_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/temp_integrate.F temp_integrate.F; fi if [ ! -L the_main_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_main_loop.F the_main_loop.F; fi if [ ! -L the_model_main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_model_main.F the_model_main.F; fi if [ ! -L thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/thermodynamics.F thermodynamics.F; fi if [ ! -L timestep.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep.F timestep.F; fi if [ ! -L timestep_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_tracer.F timestep_tracer.F; fi if [ ! -L timestep_wvel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_wvel.F timestep_wvel.F; fi if [ ! -L tracers_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_correction_step.F tracers_correction_step.F; fi if [ ! -L tracers_iigw_correction.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_iigw_correction.F tracers_iigw_correction.F; fi if [ ! -L turnoff_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/turnoff_model_io.F turnoff_model_io.F; fi if [ ! -L update_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_cg2d.F update_cg2d.F; fi if [ ! -L update_etah.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etah.F update_etah.F; fi if [ ! -L update_etaws.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etaws.F update_etaws.F; fi if [ ! -L update_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_masks_etc.F update_masks_etc.F; fi if [ ! -L update_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_r_star.F update_r_star.F; fi if [ ! -L update_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_sigma.F update_sigma.F; fi if [ ! -L update_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_surf_dr.F update_surf_dr.F; fi if [ ! -L write_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_grid.F write_grid.F; fi if [ ! -L write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_pickup.F write_pickup.F; fi if [ ! -L write_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_state.F write_state.F; fi if [ ! -L gsl_ieee_env.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsl_ieee_env.c gsl_ieee_env.c; fi if [ ! -L ptwrapper.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ptwrapper.c ptwrapper.c; fi if [ ! -L setdir.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setdir.c setdir.c; fi if [ ! -L setrlstk.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setrlstk.c setrlstk.c; fi if [ ! -L sigreg.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/sigreg.c sigreg.c; fi if [ ! -L tim.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/tim.c tim.c; fi if [ ! -L timer_stats.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timer_stats.c timer_stats.c; fi if [ ! -L CPP_EEOPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h CPP_EEOPTIONS.h; fi if [ ! -L SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/SIZE.h SIZE.h; fi if [ ! -L DEBUG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/DEBUG_OPTIONS.h DEBUG_OPTIONS.h; fi if [ ! -L DIAGNOSTICS_CALC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_CALC.h DIAGNOSTICS_CALC.h; fi if [ ! -L DIAGNOSTICS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS.h DIAGNOSTICS.h; fi if [ ! -L DIAGNOSTICS_SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_SIZE.h DIAGNOSTICS_SIZE.h; fi if [ ! -L DIAG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAG_OPTIONS.h DIAG_OPTIONS.h; fi if [ ! -L DIAGSTATS_REGIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGSTATS_REGIONS.h DIAGSTATS_REGIONS.h; fi if [ ! -L gad_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev1_dir.h gad_ad_check_lev1_dir.h; fi if [ ! -L gad_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev2_dir.h gad_ad_check_lev2_dir.h; fi if [ ! -L gad_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev3_dir.h gad_ad_check_lev3_dir.h; fi if [ ! -L gad_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev4_dir.h gad_ad_check_lev4_dir.h; fi if [ ! -L GAD_FLUX_LIMITER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_FLUX_LIMITER.h GAD_FLUX_LIMITER.h; fi if [ ! -L GAD.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD.h GAD.h; fi if [ ! -L GAD_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_OPTIONS.h GAD_OPTIONS.h; fi if [ ! -L GAD_SOM_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_SOM_VARS.h GAD_SOM_VARS.h; fi if [ ! -L MDSIO_BUFF_3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_3D.h MDSIO_BUFF_3D.h; fi if [ ! -L MDSIO_BUFF_WH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_WH.h MDSIO_BUFF_WH.h; fi if [ ! -L MDSIO_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_OPTIONS.h MDSIO_OPTIONS.h; fi if [ ! -L MOM_COMMON_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_COMMON_OPTIONS.h MOM_COMMON_OPTIONS.h; fi if [ ! -L MOM_VISC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_VISC.h MOM_VISC.h; fi if [ ! -L MOM_FLUXFORM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM.h MOM_FLUXFORM.h; fi if [ ! -L MOM_FLUXFORM_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MOM_FLUXFORM_OPTIONS.h; fi if [ ! -L MOM_VECINV_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MOM_VECINV_OPTIONS.h; fi if [ ! -L MONITOR.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR.h MONITOR.h; fi if [ ! -L MONITOR_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR_OPTIONS.h MONITOR_OPTIONS.h; fi if [ ! -L obcs_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev1_dir.h obcs_ad_check_lev1_dir.h; fi if [ ! -L obcs_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev2_dir.h obcs_ad_check_lev2_dir.h; fi if [ ! -L obcs_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev3_dir.h obcs_ad_check_lev3_dir.h; fi if [ ! -L obcs_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev4_dir.h obcs_ad_check_lev4_dir.h; fi if [ ! -L OBCS_FIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_FIELDS.h OBCS_FIELDS.h; fi if [ ! -L OBCS_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_GRID.h OBCS_GRID.h; fi if [ ! -L OBCS_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_OPTIONS.h OBCS_OPTIONS.h; fi if [ ! -L OBCS_PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PARAMS.h OBCS_PARAMS.h; fi if [ ! -L OBCS_PTRACERS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PTRACERS.h OBCS_PTRACERS.h; fi if [ ! -L OBCS_SEAICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_SEAICE.h OBCS_SEAICE.h; fi if [ ! -L ORLANSKI.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/ORLANSKI.h ORLANSKI.h; fi if [ ! -L RW_MFLDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_MFLDS.h RW_MFLDS.h; fi if [ ! -L RW_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_OPTIONS.h RW_OPTIONS.h; fi if [ ! -L shelfice_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev1_dir.h shelfice_ad_check_lev1_dir.h; fi if [ ! -L shelfice_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev2_dir.h shelfice_ad_check_lev2_dir.h; fi if [ ! -L shelfice_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev3_dir.h shelfice_ad_check_lev3_dir.h; fi if [ ! -L shelfice_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev4_dir.h shelfice_ad_check_lev4_dir.h; fi if [ ! -L SHELFICE_COST.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_COST.h SHELFICE_COST.h; fi if [ ! -L SHELFICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE.h SHELFICE.h; fi if [ ! -L SHELFICE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_OPTIONS.h SHELFICE_OPTIONS.h; fi if [ ! -L SHELFICE_TAVE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_TAVE.h SHELFICE_TAVE.h; fi if [ ! -L TIMEAVE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_OPTIONS.h TIMEAVE_OPTIONS.h; fi if [ ! -L TIMEAVE_STATV.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_STATV.h TIMEAVE_STATV.h; fi if [ ! -L cmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_c.h cmumps_c.h; fi if [ ! -L cmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_root.h cmumps_root.h; fi if [ ! -L cmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_struc.h cmumps_struc.h; fi if [ ! -L dmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_c.h dmumps_c.h; fi if [ ! -L dmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_root.h dmumps_root.h; fi if [ ! -L dmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_struc.h dmumps_struc.h; fi if [ ! -L gklib_defs.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_defs.h gklib_defs.h; fi if [ ! -L gklib_rename.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_rename.h gklib_rename.h; fi if [ ! -L gklib_tls.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_tls.h gklib_tls.h; fi if [ ! -L metis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/metis.h metis.h; fi if [ ! -L mpicxx.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpicxx.h mpicxx.h; fi if [ ! -L mpif.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpif.h mpif.h; fi if [ ! -L mpi.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi.h mpi.h; fi if [ ! -L mpiof.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpiof.h mpiof.h; fi if [ ! -L mpio.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpio.h mpio.h; fi if [ ! -L mpi_proto.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi_proto.h mpi_proto.h; fi if [ ! -L mumps_compat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_compat.h mumps_compat.h; fi if [ ! -L mumps_c_types.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_c_types.h mumps_c_types.h; fi if [ ! -L mumps_int_def.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_int_def.h mumps_int_def.h; fi if [ ! -L parmetis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/parmetis.h parmetis.h; fi if [ ! -L petscao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscao.h petscao.h; fi if [ ! -L petscbag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbag.h petscbag.h; fi if [ ! -L petscblaslapack.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack.h petscblaslapack.h; fi if [ ! -L petscblaslapack_mangle.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack_mangle.h petscblaslapack_mangle.h; fi if [ ! -L petscbt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbt.h petscbt.h; fi if [ ! -L petsccharacteristic.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccharacteristic.h petsccharacteristic.h; fi if [ ! -L petscconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf.h petscconf.h; fi if [ ! -L petscconfiginfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconfiginfo.h petscconfiginfo.h; fi if [ ! -L petscconf_poison.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf_poison.h petscconf_poison.h; fi if [ ! -L petscconvest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconvest.h petscconvest.h; fi if [ ! -L petscctable.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscctable.h petscctable.h; fi if [ ! -L petsccxxcomplexfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccxxcomplexfix.h petsccxxcomplexfix.h; fi if [ ! -L petscdevice_cuda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cuda.h petscdevice_cuda.h; fi if [ ! -L petscdevice_cupm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cupm.h petscdevice_cupm.h; fi if [ ! -L petscdevice.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice.h petscdevice.h; fi if [ ! -L petscdevice_hip.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_hip.h petscdevice_hip.h; fi if [ ! -L petscdevicetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevicetypes.h petscdevicetypes.h; fi if [ ! -L petscdmadaptor.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptor.h petscdmadaptor.h; fi if [ ! -L petscdmceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmceed.h petscdmceed.h; fi if [ ! -L petscdmcomposite.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmcomposite.h petscdmcomposite.h; fi if [ ! -L petscdmda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmda.h petscdmda.h; fi if [ ! -L petscdmdatypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmdatypes.h petscdmdatypes.h; fi if [ ! -L petscdmfield.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmfield.h petscdmfield.h; fi if [ ! -L petscdmforest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmforest.h petscdmforest.h; fi if [ ! -L petscdm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdm.h petscdm.h; fi if [ ! -L petscdmlabelephemeral.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabelephemeral.h petscdmlabelephemeral.h; fi if [ ! -L petscdmlabel.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabel.h petscdmlabel.h; fi if [ ! -L petscdmmoab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmmoab.h petscdmmoab.h; fi if [ ! -L petscdmnetwork.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmnetwork.h petscdmnetwork.h; fi if [ ! -L petscdmpatch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmpatch.h petscdmpatch.h; fi if [ ! -L petscdmplexceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexceed.h petscdmplexceed.h; fi if [ ! -L petscdmplex.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplex.h petscdmplex.h; fi if [ ! -L petscdmplextransform.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransform.h petscdmplextransform.h; fi if [ ! -L petscdmplextransformtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransformtypes.h petscdmplextransformtypes.h; fi if [ ! -L petscdmplextypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextypes.h petscdmplextypes.h; fi if [ ! -L petscdmproduct.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmproduct.h petscdmproduct.h; fi if [ ! -L petscdmredundant.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmredundant.h petscdmredundant.h; fi if [ ! -L petscdmshell.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmshell.h petscdmshell.h; fi if [ ! -L petscdmsliced.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmsliced.h petscdmsliced.h; fi if [ ! -L petscdmstag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmstag.h petscdmstag.h; fi if [ ! -L petscdmswarm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmswarm.h petscdmswarm.h; fi if [ ! -L petscdmtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmtypes.h petscdmtypes.h; fi if [ ! -L petscdraw.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdraw.h petscdraw.h; fi if [ ! -L petscdrawtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdrawtypes.h petscdrawtypes.h; fi if [ ! -L petscds.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscds.h petscds.h; fi if [ ! -L petscdstypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdstypes.h petscdstypes.h; fi if [ ! -L petscdt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdt.h petscdt.h; fi if [ ! -L petscdualspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdualspace.h petscdualspace.h; fi if [ ! -L petscerror.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscerror.h petscerror.h; fi if [ ! -L petscfeceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfeceed.h petscfeceed.h; fi if [ ! -L petscfe.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfe.h petscfe.h; fi if [ ! -L petscfetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfetypes.h petscfetypes.h; fi if [ ! -L petscfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfix.h petscfix.h; fi if [ ! -L petscfvceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvceed.h petscfvceed.h; fi if [ ! -L petscfv.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfv.h petscfv.h; fi if [ ! -L petscfvtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvtypes.h petscfvtypes.h; fi if [ ! -L petsc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsc.h petsc.h; fi if [ ! -L petscis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscis.h petscis.h; fi if [ ! -L petscistypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscistypes.h petscistypes.h; fi if [ ! -L petscksp.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscksp.h petscksp.h; fi if [ ! -L petsclandau.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclandau.h petsclandau.h; fi if [ ! -L petsclayouthdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclayouthdf5.h petsclayouthdf5.h; fi if [ ! -L petsclogdeprecated.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogdeprecated.h petsclogdeprecated.h; fi if [ ! -L petsclog.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclog.h petsclog.h; fi if [ ! -L petsclogtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogtypes.h petsclogtypes.h; fi if [ ! -L petscmachineinfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmachineinfo.h petscmachineinfo.h; fi if [ ! -L petscmacros.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmacros.h petscmacros.h; fi if [ ! -L petscmatcoarsen.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatcoarsen.h petscmatcoarsen.h; fi if [ ! -L petscmatelemental.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatelemental.h petscmatelemental.h; fi if [ ! -L petscmat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmat.h petscmat.h; fi if [ ! -L petscmath.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmath.h petscmath.h; fi if [ ! -L petscmathtool.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathtool.h petscmathtool.h; fi if [ ! -L petscmathypre.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathypre.h petscmathypre.h; fi if [ ! -L petscmatlab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatlab.h petscmatlab.h; fi if [ ! -L petscoptions.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscoptions.h petscoptions.h; fi if [ ! -L petscpartitioner.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpartitioner.h petscpartitioner.h; fi if [ ! -L petscpc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpc.h petscpc.h; fi if [ ! -L petscpctypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpctypes.h petscpctypes.h; fi if [ ! -L petscpf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpf.h petscpf.h; fi if [ ! -L petscpkg_version.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpkg_version.h petscpkg_version.h; fi if [ ! -L petscsection.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsection.h petscsection.h; fi if [ ! -L petscsectiontypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsectiontypes.h petscsectiontypes.h; fi if [ ! -L petscsf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsf.h petscsf.h; fi if [ ! -L petscsftypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsftypes.h petscsftypes.h; fi if [ ! -L petscsnes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnes.h petscsnes.h; fi if [ ! -L petscspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscspace.h petscspace.h; fi if [ ! -L petscstring.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscstring.h petscstring.h; fi if [ ! -L petscsys.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsys.h petscsys.h; fi if [ ! -L petscsystypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsystypes.h petscsystypes.h; fi if [ ! -L petsctao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao.h petsctao.h; fi if [ ! -L petsctaolinesearch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctaolinesearch.h petsctaolinesearch.h; fi if [ ! -L petsctime.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctime.h petsctime.h; fi if [ ! -L petscts.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscts.h petscts.h; fi if [ ! -L petscvec.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscvec.h petscvec.h; fi if [ ! -L petscversion.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscversion.h petscversion.h; fi if [ ! -L petscviennacl.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviennacl.h petscviennacl.h; fi if [ ! -L petscviewerexodusii.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerexodusii.h petscviewerexodusii.h; fi if [ ! -L petscviewer.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewer.h petscviewer.h; fi if [ ! -L petscviewerhdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerhdf5.h petscviewerhdf5.h; fi if [ ! -L petscviewersaws.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewersaws.h petscviewersaws.h; fi if [ ! -L petscviewertypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewertypes.h petscviewertypes.h; fi if [ ! -L petscwebclient.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscwebclient.h petscwebclient.h; fi if [ ! -L ricehdf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/ricehdf.h ricehdf.h; fi if [ ! -L smumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_c.h smumps_c.h; fi if [ ! -L smumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_root.h smumps_root.h; fi if [ ! -L smumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_struc.h smumps_struc.h; fi if [ ! -L szip_adpt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/szip_adpt.h szip_adpt.h; fi if [ ! -L szlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/szlib.h szlib.h; fi if [ ! -L zconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zconf.h zconf.h; fi if [ ! -L zlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zlib.h zlib.h; fi if [ ! -L zmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_c.h zmumps_c.h; fi if [ ! -L zmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_root.h zmumps_root.h; fi if [ ! -L zmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_struc.h zmumps_struc.h; fi if [ ! -L BAR2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BAR2.h BAR2.h; fi if [ ! -L BARRIER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BARRIER.h BARRIER.h; fi if [ ! -L CPP_EEMACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CPP_EEMACROS.h CPP_EEMACROS.h; fi if [ ! -L CUMULSUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CUMULSUM.h CUMULSUM.h; fi if [ ! -L DEF_IN_MAKEFILE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/DEF_IN_MAKEFILE.h DEF_IN_MAKEFILE.h; fi if [ ! -L EEBUFF_SCPU.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEBUFF_SCPU.h EEBUFF_SCPU.h; fi if [ ! -L EEPARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEPARAMS.h EEPARAMS.h; fi if [ ! -L EESUPPORT.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EESUPPORT.h EESUPPORT.h; fi if [ ! -L EXCH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EXCH.h EXCH.h; fi if [ ! -L GLOBAL_MAX.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_MAX.h GLOBAL_MAX.h; fi if [ ! -L GLOBAL_SUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_SUM.h GLOBAL_SUM.h; fi if [ ! -L MAIN_PDIRECTIVES1.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES1.h MAIN_PDIRECTIVES1.h; fi if [ ! -L MAIN_PDIRECTIVES2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES2.h MAIN_PDIRECTIVES2.h; fi if [ ! -L MPI_INFO.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MPI_INFO.h MPI_INFO.h; fi if [ ! -L SIGREG.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/SIGREG.h SIGREG.h; fi if [ ! -L CG2D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG2D.h CG2D.h; fi if [ ! -L CG3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG3D.h CG3D.h; fi if [ ! -L CPP_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h CPP_OPTIONS.h; fi if [ ! -L DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXC_MACROS.h DXC_MACROS.h; fi if [ ! -L DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXF_MACROS.h DXF_MACROS.h; fi if [ ! -L DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXG_MACROS.h DXG_MACROS.h; fi if [ ! -L DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXV_MACROS.h DXV_MACROS.h; fi if [ ! -L DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYC_MACROS.h DYC_MACROS.h; fi if [ ! -L DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYF_MACROS.h DYF_MACROS.h; fi if [ ! -L DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYG_MACROS.h DYG_MACROS.h; fi if [ ! -L DYNVARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYNVARS.h DYNVARS.h; fi if [ ! -L DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYU_MACROS.h DYU_MACROS.h; fi if [ ! -L EOS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/EOS.h EOS.h; fi if [ ! -L FCORI_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FCORI_MACROS.h FCORI_MACROS.h; fi if [ ! -L FFIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FFIELDS.h FFIELDS.h; fi if [ ! -L GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID.h GRID.h; fi if [ ! -L GRID_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID_MACROS.h GRID_MACROS.h; fi if [ ! -L HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACC_MACROS.h HFACC_MACROS.h; fi if [ ! -L HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACS_MACROS.h HFACS_MACROS.h; fi if [ ! -L HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACW_MACROS.h HFACW_MACROS.h; fi if [ ! -L MASKS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKS_MACROS.h MASKS_MACROS.h; fi if [ ! -L MASKW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKW_MACROS.h MASKW_MACROS.h; fi if [ ! -L NH_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/NH_VARS.h NH_VARS.h; fi if [ ! -L PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/PARAMS.h PARAMS.h; fi if [ ! -L RA_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RA_MACROS.h RA_MACROS.h; fi if [ ! -L RAS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAS_MACROS.h RAS_MACROS.h; fi if [ ! -L RAW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAW_MACROS.h RAW_MACROS.h; fi if [ ! -L RECIP_DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXC_MACROS.h RECIP_DXC_MACROS.h; fi if [ ! -L RECIP_DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXF_MACROS.h RECIP_DXF_MACROS.h; fi if [ ! -L RECIP_DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXG_MACROS.h RECIP_DXG_MACROS.h; fi if [ ! -L RECIP_DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXV_MACROS.h RECIP_DXV_MACROS.h; fi if [ ! -L RECIP_DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYC_MACROS.h RECIP_DYC_MACROS.h; fi if [ ! -L RECIP_DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYF_MACROS.h RECIP_DYF_MACROS.h; fi if [ ! -L RECIP_DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYG_MACROS.h RECIP_DYG_MACROS.h; fi if [ ! -L RECIP_DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYU_MACROS.h RECIP_DYU_MACROS.h; fi if [ ! -L RECIP_HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACC_MACROS.h RECIP_HFACC_MACROS.h; fi if [ ! -L RECIP_HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACS_MACROS.h RECIP_HFACS_MACROS.h; fi if [ ! -L RECIP_HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACW_MACROS.h RECIP_HFACW_MACROS.h; fi if [ ! -L RESTART.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RESTART.h RESTART.h; fi if [ ! -L SET_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SET_GRID.h SET_GRID.h; fi if [ ! -L SOLVE_FOR_PRESSURE3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE3D.h SOLVE_FOR_PRESSURE3D.h; fi if [ ! -L SOLVE_FOR_PRESSURE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE.h SOLVE_FOR_PRESSURE.h; fi if [ ! -L SURFACE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SURFACE.h SURFACE.h; fi if [ ! -L TANPHIATU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATU_MACROS.h TANPHIATU_MACROS.h; fi if [ ! -L TANPHIATV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATV_MACROS.h TANPHIATV_MACROS.h; fi if [ ! -L THE_MODEL_COMMON_BLOCKS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/THE_MODEL_COMMON_BLOCKS.h THE_MODEL_COMMON_BLOCKS.h; fi if [ ! -L XC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/XC_MACROS.h XC_MACROS.h; fi if [ ! -L YC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/YC_MACROS.h YC_MACROS.h; fi Creating FC_NAMEMANGLE.h ... echo "#define FC_NAMEMANGLE(X) X ## _" > FC_NAMEMANGLE.h Creating BUILD_INFO.h ... echo "#define THISVER 'checkpoint68i'" > BUILD_INFO.h echo "#define THISUSER 'jenkins'" >> BUILD_INFO.h echo "#define THISDATE 'Sun 28 Apr 2024 02:29:04 PM PDT'" >> BUILD_INFO.h echo "#define THISHOST 'debian-linux-vm'" >> BUILD_INFO.h make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build' /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/xmakedepend -f Makefile -o .f -DWORDLENGTH=4 -DNML_TERMINATOR -DALLOW_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_ETIME_SBR -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -DHAVE_FLUSH -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include cpl_issm.F do_oceanic_phys.F eeboot_minimal.F eedie.F chksum_tiled.F debug_call.F debug_cs_corner_uv.F debug_enter.F debug_fld_stats_rl.F debug_fld_stats_rs.F debug_leave.F debug_msg.F debug_stats_rl.F debug_stats_rs.F fill_in_corners_rl.F write_fullarray_rl.F write_fullarray_rs.F diag_calc_psivel.F diag_cg2d.F diagnostics_addtolist.F diagnostics_calc_phivel.F diagnostics_check.F diagnostics_clear.F diagnostics_fill.F diagnostics_fill_field.F diagnostics_fill_rs.F diagnostics_fill_state.F diagnostics_fract_fill.F diagnostics_ini_io.F diagnostics_init_early.F diagnostics_init_fixed.F diagnostics_init_varia.F diagnostics_interp_p2p.F diagnostics_interp_vert.F diagnostics_is_on.F diagnostics_list_check.F diagnostics_main_init.F diagnostics_mnc_out.F diagnostics_out.F diagnostics_readparms.F diagnostics_read_pickup.F diagnostics_scale_fill.F diagnostics_scale_fill_rs.F diagnostics_set_calc.F diagnostics_setdiag.F diagnostics_set_levels.F diagnostics_set_pointers.F diagnostics_status_error.F diagnostics_sum_levels.F diagnostics_summary.F diagnostics_switch_onoff.F diagnostics_utils.F diagnostics_write_adj.F diagnostics_write.F diagnostics_write_pickup.F diagstats_ascii_out.F diagstats_calc.F diagstats_clear.F diagstats_close_io.F diagstats_fill.F diagstats_global.F diagstats_ini_io.F diagstats_local.F diagstats_mnc_out.F diagstats_others_calc.F diagstats_output.F diagstats_setdiag.F diagstats_set_pointers.F diagstats_set_regions.F diag_vegtile_fill.F gad_advection.F gad_advscheme.F gad_biharm_r.F gad_biharm_x.F gad_biharm_y.F gad_c2_adv_r.F gad_c2_adv_x.F gad_c2_adv_y.F gad_c2_impl_r.F gad_c4_adv_r.F gad_c4_adv_x.F gad_c4_adv_y.F gad_calc_rhs.F gad_check.F gad_del2.F gad_diagnostics_init.F gad_diagnostics_state.F gad_diff_r.F gad_diff_x.F gad_diff_y.F gad_dst2u1_adv_r.F gad_dst2u1_adv_x.F gad_dst2u1_adv_y.F gad_dst2u1_impl_r.F gad_dst3_adv_r.F gad_dst3_adv_x.F gad_dst3_adv_y.F gad_dst3fl_adv_r.F gad_dst3fl_adv_x.F gad_dst3fl_adv_y.F gad_dst3fl_impl_r.F gad_exch_som.F gad_fluxlimit_adv_r.F gad_fluxlimit_adv_x.F gad_fluxlimit_adv_y.F gad_fluxlimit_impl_r.F gad_grad_x.F gad_grad_y.F gad_implicit_r.F gad_init_fixed.F gad_init_varia.F gad_os7mp_adv_r.F gad_os7mp_adv_x.F gad_os7mp_adv_y.F gad_osc_hat_r.F gad_osc_hat_x.F gad_osc_hat_y.F gad_osc_mul_r.F gad_osc_mul_x.F gad_osc_mul_y.F gad_plm_fun.F gad_ppm_adv_r.F gad_ppm_adv_x.F gad_ppm_adv_y.F gad_ppm_flx_r.F gad_ppm_flx_x.F gad_ppm_flx_y.F gad_ppm_fun.F gad_ppm_hat_r.F gad_ppm_hat_x.F gad_ppm_hat_y.F gad_ppm_p3e_r.F gad_ppm_p3e_x.F gad_ppm_p3e_y.F gad_pqm_adv_r.F gad_pqm_adv_x.F gad_pqm_adv_y.F gad_pqm_flx_r.F gad_pqm_flx_x.F gad_pqm_flx_y.F gad_pqm_fun.F gad_pqm_hat_r.F gad_pqm_hat_x.F gad_pqm_hat_y.F gad_pqm_p5e_r.F gad_pqm_p5e_x.F gad_pqm_p5e_y.F gad_read_pickup.F gad_som_advect.F gad_som_adv_r.F gad_som_adv_x.F gad_som_adv_y.F gad_som_exchanges.F gad_som_fill_cs_corner.F gad_som_lim_r.F gad_som_prep_cs_corner.F gad_u3_adv_r.F gad_u3_adv_x.F gad_u3_adv_y.F gad_u3c4_impl_r.F gad_write_pickup.F salt_fill.F mdsio_buffertorl.F mdsio_buffertors.F mdsio_check4file.F mdsio_facef_read.F mdsio_gl.F mdsio_gl_slice.F mdsio_pass_r4torl.F mdsio_pass_r4tors.F mdsio_pass_r8torl.F mdsio_pass_r8tors.F mdsio_rd_rec_rl.F mdsio_rd_rec_rs.F mdsio_read_field.F mdsio_read_meta.F mdsio_read_section.F mdsio_read_tape.F mdsio_readvec_loc.F mdsio_read_whalos.F mdsio_rw_field.F mdsio_rw_slice.F mdsio_seg4torl.F mdsio_seg4tors.F mdsio_seg8torl.F mdsio_seg8tors.F mdsio_segxtorx_2d.F mdsio_write_field.F mdsio_writelocal.F mdsio_write_meta.F mdsio_write_section.F mdsio_write_tape.F mdsio_writevec_loc.F mdsio_write_whalos.F mdsio_wr_metafiles.F mdsio_wr_rec_rl.F mdsio_wr_rec_rs.F mom_calc_3d_strain.F mom_calc_absvort3.F mom_calc_hdiv.F mom_calc_hfacz.F mom_calc_ke.F mom_calc_relvort3.F mom_calc_smag_3d.F mom_calc_strain.F mom_calc_tension.F mom_calc_visc.F mom_diagnostics_init.F mom_hdissip.F mom_init_fixed.F mom_quasihydrostatic.F mom_u_botdrag_coeff.F mom_u_coriolis_nh.F mom_u_implicit_r.F mom_u_metric_nh.F mom_u_rviscflux.F mom_u_sidedrag.F mom_uv_smag_3d.F mom_v_botdrag_coeff.F mom_v_coriolis_nh.F mom_v_implicit_r.F mom_visc_qgl_limit.F mom_visc_qgl_stretch.F mom_v_metric_nh.F mom_v_rviscflux.F mom_v_sidedrag.F mom_w_coriolis_nh.F mom_w_metric_nh.F mom_w_sidedrag.F mom_w_smag_3d.F mom_calc_rtrans.F mom_fluxform.F mom_u_adv_uu.F mom_u_adv_vu.F mom_u_adv_wu.F mom_u_coriolis.F mom_u_del2u.F mom_u_metric_cylinder.F mom_u_metric_sphere.F mom_uv_boundary.F mom_u_xviscflux.F mom_u_yviscflux.F mom_v_adv_uv.F mom_v_adv_vv.F mom_v_adv_wv.F mom_v_coriolis.F mom_v_del2v.F mom_v_metric_cylinder.F mom_v_metric_sphere.F mom_v_xviscflux.F mom_v_yviscflux.F mom_vecinv.F mom_vi_coriolis.F mom_vi_del2uv.F mom_vi_hdissip.F mom_vi_u_coriolis_c4.F mom_vi_u_coriolis.F mom_vi_u_grad_ke.F mom_vi_u_vertshear.F mom_vi_v_coriolis_c4.F mom_vi_v_coriolis.F mom_vi_v_grad_ke.F mom_vi_v_vertshear.F mon_advcfl.F mon_advcflw2.F mon_advcflw.F mon_calc_advcfl.F mon_calc_stats_rl.F mon_calc_stats_rs.F mon_init.F monitor_ad.F monitor.F monitor_g.F mon_ke.F mon_out.F mon_printstats_rl.F mon_printstats_rs.F mon_set_iounit.F mon_set_pref.F mon_solution.F mon_stats_latbnd_rl.F mon_stats_rl.F mon_stats_rs.F mon_surfcor.F mon_vort3.F mon_writestats_rl.F mon_writestats_rs.F obcs_add_tides.F obcs_adjust.F obcs_adjust_uvice.F obcs_apply_eta.F obcs_apply_ptracer.F obcs_apply_r_star.F obcs_apply_seaice.F obcs_apply_surf_dr.F obcs_apply_ts.F obcs_apply_uv.F obcs_apply_uvice.F obcs_apply_w.F obcs_balance_flow.F obcs_calc.F obcs_calc_stevens.F obcs_check_depths.F obcs_check.F obcs_copy_tracer.F obcs_copy_uv_n.F obcs_diag_balance.F obcs_exchanges.F obcs_exf_load.F obcs_fields_load.F obcs_init_fixed.F obcs_init_variables.F obcs_monitor.F obcs_mon_stats.F obcs_output.F obcs_prescribe_read.F obcs_readparms.F obcs_read_pickup.F obcs_save_uv_n.F obcs_seaice_sponge.F obcs_set_connect.F obcs_sponge.F obcs_u1_adv_tracer.F obcs_write_pickup.F orlanski_east.F orlanski_init.F orlanski_north.F orlanski_south.F orlanski_west.F get_write_global_fld.F read_fld_xy_rl.F read_fld_xy_rs.F read_fld_xyz_rl.F read_fld_xyz_rs.F read_glvec_rl.F read_glvec_rs.F read_mflds.F read_rec.F rw_get_suffix.F set_write_global_fld.F write_fld_3d_rl.F write_fld_3d_rs.F write_fld_s3d_rl.F write_fld_s3d_rs.F write_fld_xy_rl.F write_fld_xy_rs.F write_fld_xyz_rl.F write_fld_xyz_rs.F write_glvec_rl.F write_glvec_rs.F write_local_rl.F write_local_rs.F write_rec.F shelfice_check.F shelfice_cost_accumulate.F shelfice_cost_final.F shelfice_cost_shifwflx.F shelfice_diagnostics_drag.F shelfice_forcing.F shelfice_forcing_surf.F shelfice_init_depths.F shelfice_init_fixed.F shelfice_init_varia.F shelfice_mask_seaice.F shelfice_mnc_init.F shelfice_output.F shelfice_readparms.F shelfice_read_pickup.F shelfice_remesh_calc_w.F shelfice_remesh_c_mask.F shelfice_remeshing.F shelfice_remesh_state.F shelfice_remesh_uv_mask.F shelfice_step_icemass.F shelfice_thermodynamics.F shelfice_u_drag_coeff.F shelfice_v_drag_coeff.F shelfice_write_pickup.F timeave_cumul_1k1t.F timeave_cumul_1t.F timeave_cumul_1vfc.F timeave_cumul_2v.F timeave_cumul_2vfc.F timeave_cumulate.F timeave_cumul_dif_1t.F timeave_init_fixed.F timeave_norma_2v.F timeave_normalize.F timeave_reset.F timeave_statvars.F timeave_statv_write.F timeave_surf_flux.F all_proc_die.F bar2.F bar_check.F barrier.F check_threads.F comm_stats.F cumulsum_z_tile.F different_multiple.F diff_phase_multiple.F eeboot.F eedata_example.F eeintro_msg.F eeset_parms.F eewrite_eeenv.F exch0_r4.F exch0_r8.F exch0_rl.F exch0_rs.F exch1_bg_r4_cube.F exch1_bg_r8_cube.F exch1_bg_rl_cube.F exch1_bg_rs_cube.F exch1_r4_cube.F exch1_r4.F exch1_r8_cube.F exch1_r8.F exch1_rl_ad.F exch1_rl_cube_ad.F exch1_rl_cube.F exch1_rl.F exch1_rs_ad.F exch1_rs_cube_ad.F exch1_rs_cube.F exch1_rs.F exch1_uv_r4_cube.F exch1_uv_r8_cube.F exch1_uv_rl_cube.F exch1_uv_rs_cube.F exch1_z_r4_cube.F exch1_z_r8_cube.F exch1_z_rl_cube.F exch1_z_rs_cube.F exch_3d_r4.F exch_3d_r8.F exch_3d_rl.F exch_3d_rs.F exch_cycle_ebl.F exch_init.F exch_r4_recv_get_x.F exch_r4_recv_get_y.F exch_r4_send_put_x.F exch_r4_send_put_y.F exch_r8_recv_get_x.F exch_r8_recv_get_y.F exch_r8_send_put_x.F exch_r8_send_put_y.F exch_rl_recv_get_x.F exch_rl_recv_get_y.F exch_rl_send_put_x.F exch_rl_send_put_y.F exch_rs_recv_get_x.F exch_rs_recv_get_y.F exch_rs_send_put_x.F exch_rs_send_put_y.F exch_s3d_r4.F exch_s3d_r8.F exch_s3d_rl.F exch_s3d_rs.F exch_sm_3d_r4.F exch_sm_3d_r8.F exch_sm_3d_rl.F exch_sm_3d_rs.F exch_uv_3d_r4.F exch_uv_3d_r8.F exch_uv_3d_rl.F exch_uv_3d_rs.F exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rs.F exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rs.F exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rs.F exch_uv_xy_r4.F exch_uv_xy_r8.F exch_uv_xy_rl.F exch_uv_xy_rs.F exch_uv_xyz_r4.F exch_uv_xyz_r8.F exch_uv_xyz_rl.F exch_uv_xyz_rs.F exch_xy_r4.F exch_xy_r8.F exch_xy_rl.F exch_xy_rs.F exch_xyz_r4.F exch_xyz_r8.F exch_xyz_rl.F exch_xyz_rs.F exch_z_3d_r4.F exch_z_3d_r8.F exch_z_3d_rl.F exch_z_3d_rs.F fill_cs_corner_ag_rl.F fill_cs_corner_tr_rl.F fill_cs_corner_uv_rl.F fill_cs_corner_uv_rs.F fool_the_compiler.F gather_2d_r4.F gather_2d_r8.F gather_2d_wh_r4.F gather_2d_wh_r8.F gather_vec_r4.F gather_vec_r8.F gather_xz.F gather_yz.F get_periodic_interval.F global_max.F global_sum.F global_sum_singlecpu.F global_sum_tile.F global_vec_sum.F gsum.F ini_communication_patterns.F ini_procs.F ini_threading_environment.F lef_zero.F main.F master_cpu_io.F master_cpu_thread.F mds_byteswapi4.F mds_byteswapr4.F mds_byteswapr8.F mdsfindunit.F mds_flush.F mds_reclen.F memsync.F nml_change_syntax.F nml_set_terminator.F open_copy_data_file.F print.F reset_halo.F scatter_2d_r4.F scatter_2d_r8.F scatter_2d_wh_r4.F scatter_2d_wh_r8.F scatter_vec_r4.F scatter_vec_r8.F scatter_xz.F scatter_yz.F stop_if_error.F timers.F utils.F write_utils.F adams_bashforth2.F adams_bashforth3.F add_walls2masks.F apply_forcing.F calc_3d_diffusivity.F calc_adv_flow.F calc_div_ghat.F calc_eddy_stress.F calc_grad_phi_fv.F calc_grad_phi_hyd.F calc_grad_phi_surf.F calc_grid_angles.F calc_gw.F calc_ivdc.F calc_oce_mxlayer.F calc_phi_hyd.F calc_r_star.F calc_surf_dr.F calc_viscosity.F calc_wsurf_tr.F cg2d_ex0.F cg2d.F cg2d_nsa.F cg2d_sr.F cg3d_ex0.F cg3d.F check_pickup.F config_check.F config_summary.F convective_adjustment.F convective_adjustment_ini.F convectively_mixtracer.F convective_weights.F correction_step.F cycle_ab_tracer.F cycle_tracer.F diags_oceanic_surf_flux.F diags_phi_hyd.F diags_phi_rlow.F diags_rho.F diags_sound_speed.F do_atmospheric_phys.F do_fields_blocking_exchanges.F do_stagger_fields_exchanges.F do_statevars_diags.F do_statevars_tave.F do_the_model_io.F do_write_pickup.F dynamics.F external_fields_load.F external_forcing.F external_forcing_surf.F find_alpha.F find_hyd_press_1d.F find_rho.F forcing_surf_relax.F forward_step.F freesurf_rescale_g.F freeze_surface.F grad_sigma.F gsw_teos10.F impldiff.F ini_cartesian_grid.F ini_cg2d.F ini_cg3d.F ini_cori.F ini_curvilinear_grid.F ini_cylinder_grid.F ini_depths.F ini_dynvars.F ini_eos.F ini_ffields.F ini_fields.F ini_forcing.F ini_global_domain.F ini_grid.F ini_linear_phisurf.F ini_local_grid.F ini_masks_etc.F ini_mixing.F ini_mnc_vars.F ini_model_io.F ini_nh_fields.F ini_nh_vars.F ini_nlfs_vars.F ini_parms.F ini_p_ground.F ini_pressure.F ini_psurf.F ini_salt.F ini_sigma_hfac.F ini_spherical_polar_grid.F ini_theta.F initialise_fixed.F initialise_varia.F ini_vel.F ini_vertical_grid.F integrate_for_w.F integr_continuity.F load_fields_driver.F load_grid_spacing.F load_ref_files.F main_do_loop.F momentum_correction_step.F packages_boot.F packages_check.F packages_error_msg.F packages_init_fixed.F packages_init_variables.F packages_print_msg.F packages_readparms.F packages_unused_msg.F packages_write_pickup.F plot_field.F port_rand.F post_cg3d.F pre_cg3d.F pressure_for_eos.F read_pickup.F remove_mean.F reset_nlfs_vars.F rotate_spherical_polar_grid.F rotate_uv2en.F salt_integrate.F seawater.F set_defaults.F set_grid_factors.F set_parms.F set_ref_state.F solve_for_pressure.F solve_pentadiagonal.F solve_tridiagonal.F solve_uv_tridiago.F state_summary.F swfrac.F taueddy_init_varia.F taueddy_tendency_apply.F temp_integrate.F the_main_loop.F the_model_main.F thermodynamics.F timestep.F timestep_tracer.F timestep_wvel.F tracers_correction_step.F tracers_iigw_correction.F turnoff_model_io.F update_cg2d.F update_etah.F update_etaws.F update_masks_etc.F update_r_star.F update_sigma.F update_surf_dr.F write_grid.F write_pickup.F write_state.F Appending dependencies to Makefile /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/f90mkdepend >> Makefile WARNING: f90mkdepend: no source file found for module `petscdtbinomial()` WARNING: f90mkdepend: no source file found for module `seterra()` WARNING: f90mkdepend: no source file found for module `seterra()` WARNING: f90mkdepend: no source file found for module `petsccalla()`. WARNING: f90mkdepend: no source file found for module `chkmema` WARNING: f90mkdepend: no source file found for module `petscstackpushexternal()` WARNING: f90mkdepend: no source file found for module `petscfunctionbeginuser` WARNING: f90mkdepend: no source file found for module this WARNING: f90mkdepend: no source file found for module `petscobjectoptionsbegin()` WARNING: f90mkdepend: no source file found for module `petsc_null_integer` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module the WARNING: f90mkdepend: no source file found for module `petscclassidregister()` WARNING: f90mkdepend: no source file found for module `petsccount_fmt` WARNING: f90mkdepend: no source file found for module of WARNING: f90mkdepend: no source file found for module `petscviewerfilesetmode()` rm -f makedepend.out [41;37m step #6: RunUncoupledMITgcm [0m Year: 0 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.083333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.16667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.25 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.33333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.41667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.5 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.58333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.66667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.75 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.83333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.91667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 1 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END [41;37m step #7: CreateMesh [0m Info: creating coordinates in polar stereographic (Std Latitude: 71S Meridian: 0) saving model as: Models/IceOcean.CreateMesh [41;37m step #8: MeshGeometry [0m saving model as: Models/IceOcean.MeshGeometry [41;37m step #9: ParameterizeIce [0m saving model as: Models/IceOcean.ParameterizeIce [41;37m step #10: RunUncoupledISSM [0m checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/12 time [yr]: 0.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 2/12 time [yr]: 0.17 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 3/12 time [yr]: 0.25 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 4/12 time [yr]: 0.33 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 5/12 time [yr]: 0.42 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 6/12 time [yr]: 0.50 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 7/12 time [yr]: 0.58 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 8/12 time [yr]: 0.67 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 9/12 time [yr]: 0.75 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 10/12 time [yr]: 0.83 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 11/12 time [yr]: 0.92 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 12/12 time [yr]: 1.00 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.109297 Total Core solution elapsed time: 2.96164 Linear solver elapsed time: 1.85562 (63%) Total elapsed time: 0 hrs 0 min 3 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster saving model as: Models/IceOcean.RunUncoupledISSM [41;37m step #11: RunCoupledMITgcmISSM [0m Year: 0 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0288863 Total Core solution elapsed time: 0.518797 Linear solver elapsed time: 0.326033 (63%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.083333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.17 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0294967 Total Core solution elapsed time: 0.2246 Linear solver elapsed time: 0.146612 (65%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.16667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.25 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0336898 Total Core solution elapsed time: 0.244867 Linear solver elapsed time: 0.160779 (66%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.25 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.33 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0283494 Total Core solution elapsed time: 0.191627 Linear solver elapsed time: 0.118888 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.33333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.42 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0281543 Total Core solution elapsed time: 0.198923 Linear solver elapsed time: 0.123985 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.41667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.50 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0303295 Total Core solution elapsed time: 0.233466 Linear solver elapsed time: 0.149873 (64%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.5 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.58 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0298819 Total Core solution elapsed time: 0.207567 Linear solver elapsed time: 0.129485 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.58333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/2 time [yr]: 0.67 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0405349 Total Core solution elapsed time: 0.206461 Linear solver elapsed time: 0.126847 (61%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.66667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.75 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0278123 Total Core solution elapsed time: 0.199089 Linear solver elapsed time: 0.125587 (63%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.75 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.83 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.043227 Total Core solution elapsed time: 0.209959 Linear solver elapsed time: 0.131058 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.83333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/2 time [yr]: 0.92 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0460865 Total Core solution elapsed time: 0.211158 Linear solver elapsed time: 0.131895 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.91667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 1.00 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0247459 Total Core solution elapsed time: 0.181864 Linear solver elapsed time: 0.112916 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 1 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 1.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.027859 Total Core solution elapsed time: 0.183399 Linear solver elapsed time: 0.113878 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster saving model as: Models/IceOcean.RunCoupledMITgcmISSM SUCCESS difference: 0 < 2e-13 test id: 4001 test name: IceOcean field: Base1 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: Melting1 SUCCESS difference: 5.4e-15 < 8e-06 test id: 4001 test name: IceOcean field: Vx2 SUCCESS difference: 1e-14 < 7e-06 test id: 4001 test name: IceOcean field: Vy2 SUCCESS difference: 1.3e-15 < 2e-07 test id: 4001 test name: IceOcean field: Thickness2 SUCCESS difference: 2.5e-16 < 2e-08 test id: 4001 test name: IceOcean field: Base2 SUCCESS difference: 3.4e-16 < 3e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset2 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate2 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: Melting2 SUCCESS difference: 8.1e-15 < 8e-06 test id: 4001 test name: IceOcean field: Vx3 SUCCESS difference: 8.5e-15 < 7e-06 test id: 4001 test name: IceOcean field: Vy3 SUCCESS difference: 2.3e-15 < 4e-07 test id: 4001 test name: IceOcean field: Thickness3 SUCCESS difference: 4.6e-16 < 3e-08 test id: 4001 test name: IceOcean field: Base3 SUCCESS difference: 4.3e-16 < 5e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset3 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate3 SUCCESS difference: 0 < 6e-08 test id: 4001 test name: IceOcean field: Melting3 SUCCESS difference: 1e-14 < 8e-06 test id: 4001 test name: IceOcean field: Vx4 SUCCESS difference: 2.2e-14 < 7e-06 test id: 4001 test name: IceOcean field: Vy4 SUCCESS difference: 2.5e-15 < 5e-07 test id: 4001 test name: IceOcean field: Thickness4 SUCCESS difference: 6e-16 < 4e-08 test id: 4001 test name: IceOcean field: Base4 SUCCESS difference: 4.3e-16 < 8e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset4 SUCCESS difference: 0 < 6e-08 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate4 SUCCESS difference: 0 < 3e-07 test id: 4001 test name: IceOcean field: Melting4 +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-4001 +++ working dir: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/nightlylog [41;37m step #1: Parameters [0m saving data in: Models/IceOcean.Parameters [41;37m step #2: Bathymetry [0m saving data in: Models/IceOcean.Bathymetry [41;37m step #3: IceSheetGeometry [0m saving data in: Models/IceOcean.IceSheetGeometry [41;37m step #4: GetMITgcm [0m --2024-04-28 14:28:50-- https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz Resolving github.com (github.com)... 140.82.116.3 Connecting to github.com (github.com)|140.82.116.3|:443... connected. HTTP request sent, awaiting response... 302 Found Location: https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i [following] --2024-04-28 14:28:50-- https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i Resolving codeload.github.com (codeload.github.com)... 140.82.116.9 Connecting to codeload.github.com (codeload.github.com)|140.82.116.9|:443... connected. 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MITgcm-checkpoint68i/model/src/ini_sigma_hfac.F MITgcm-checkpoint68i/model/src/ini_spherical_polar_grid.F MITgcm-checkpoint68i/model/src/ini_theta.F MITgcm-checkpoint68i/model/src/ini_vel.F MITgcm-checkpoint68i/model/src/ini_vertical_grid.F MITgcm-checkpoint68i/model/src/initialise_fixed.F MITgcm-checkpoint68i/model/src/initialise_varia.F MITgcm-checkpoint68i/model/src/integr_continuity.F MITgcm-checkpoint68i/model/src/integrate_for_w.F MITgcm-checkpoint68i/model/src/load_fields_driver.F MITgcm-checkpoint68i/model/src/load_grid_spacing.F MITgcm-checkpoint68i/model/src/load_ref_files.F MITgcm-checkpoint68i/model/src/main_do_loop.F MITgcm-checkpoint68i/model/src/model_ad_diff.list MITgcm-checkpoint68i/model/src/momentum_correction_step.F MITgcm-checkpoint68i/model/src/packages_boot.F MITgcm-checkpoint68i/model/src/packages_check.F MITgcm-checkpoint68i/model/src/packages_error_msg.F MITgcm-checkpoint68i/model/src/packages_init_fixed.F MITgcm-checkpoint68i/model/src/packages_init_variables.F MITgcm-checkpoint68i/model/src/packages_print_msg.F MITgcm-checkpoint68i/model/src/packages_readparms.F MITgcm-checkpoint68i/model/src/packages_unused_msg.F MITgcm-checkpoint68i/model/src/packages_write_pickup.F MITgcm-checkpoint68i/model/src/plot_field.F MITgcm-checkpoint68i/model/src/port_rand.F MITgcm-checkpoint68i/model/src/post_cg3d.F MITgcm-checkpoint68i/model/src/pre_cg3d.F MITgcm-checkpoint68i/model/src/pressure_for_eos.F MITgcm-checkpoint68i/model/src/read_pickup.F MITgcm-checkpoint68i/model/src/remove_mean.F MITgcm-checkpoint68i/model/src/reset_nlfs_vars.F MITgcm-checkpoint68i/model/src/rotate_spherical_polar_grid.F MITgcm-checkpoint68i/model/src/rotate_uv2en.F MITgcm-checkpoint68i/model/src/salt_integrate.F MITgcm-checkpoint68i/model/src/seawater.F MITgcm-checkpoint68i/model/src/set_defaults.F MITgcm-checkpoint68i/model/src/set_grid_factors.F MITgcm-checkpoint68i/model/src/set_parms.F MITgcm-checkpoint68i/model/src/set_ref_state.F MITgcm-checkpoint68i/model/src/solve_for_pressure.F MITgcm-checkpoint68i/model/src/solve_pentadiagonal.F MITgcm-checkpoint68i/model/src/solve_tridiagonal.F MITgcm-checkpoint68i/model/src/solve_uv_tridiago.F MITgcm-checkpoint68i/model/src/state_summary.F MITgcm-checkpoint68i/model/src/swfrac.F MITgcm-checkpoint68i/model/src/taueddy_init_varia.F MITgcm-checkpoint68i/model/src/taueddy_tendency_apply.F MITgcm-checkpoint68i/model/src/temp_integrate.F MITgcm-checkpoint68i/model/src/the_main_loop.F MITgcm-checkpoint68i/model/src/the_model_main.F MITgcm-checkpoint68i/model/src/thermodynamics.F MITgcm-checkpoint68i/model/src/timestep.F MITgcm-checkpoint68i/model/src/timestep_tracer.F MITgcm-checkpoint68i/model/src/timestep_wvel.F MITgcm-checkpoint68i/model/src/tracers_correction_step.F MITgcm-checkpoint68i/model/src/tracers_iigw_correction.F MITgcm-checkpoint68i/model/src/turnoff_model_io.F MITgcm-checkpoint68i/model/src/update_cg2d.F MITgcm-checkpoint68i/model/src/update_etah.F MITgcm-checkpoint68i/model/src/update_etaws.F MITgcm-checkpoint68i/model/src/update_masks_etc.F MITgcm-checkpoint68i/model/src/update_r_star.F MITgcm-checkpoint68i/model/src/update_sigma.F MITgcm-checkpoint68i/model/src/update_surf_dr.F MITgcm-checkpoint68i/model/src/write_grid.F MITgcm-checkpoint68i/model/src/write_pickup.F MITgcm-checkpoint68i/model/src/write_state.F MITgcm-checkpoint68i/optim/ MITgcm-checkpoint68i/optim/Makefile MITgcm-checkpoint68i/optim/Makefile_macosx MITgcm-checkpoint68i/optim/README.md MITgcm-checkpoint68i/optim/blas1.h MITgcm-checkpoint68i/optim/data.ctrl MITgcm-checkpoint68i/optim/data.ecco MITgcm-checkpoint68i/optim/data.optim MITgcm-checkpoint68i/optim/flowchart_optim.txt MITgcm-checkpoint68i/optim/minimization.h MITgcm-checkpoint68i/optim/optim.h MITgcm-checkpoint68i/optim/optim_initmod.F MITgcm-checkpoint68i/optim/optim_main.F MITgcm-checkpoint68i/optim/optim_numbmod.F MITgcm-checkpoint68i/optim/optim_readdata.F MITgcm-checkpoint68i/optim/optim_sub.F MITgcm-checkpoint68i/optim/optim_write_control.F MITgcm-checkpoint68i/optim/optim_writedata.F MITgcm-checkpoint68i/optim/simul.F MITgcm-checkpoint68i/optim/to_do.txt MITgcm-checkpoint68i/optim/utils.F MITgcm-checkpoint68i/optim/xerbla.F MITgcm-checkpoint68i/pkg/ MITgcm-checkpoint68i/pkg/admtlm/ MITgcm-checkpoint68i/pkg/admtlm/ADMTLM_OPTIONS.h MITgcm-checkpoint68i/pkg/admtlm/admtlm_bypassad.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_driver.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd2model.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_init_fixed.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_map.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_metric.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_model2dsvd.F MITgcm-checkpoint68i/pkg/admtlm/arpack_debug.h MITgcm-checkpoint68i/pkg/aim_v23/ MITgcm-checkpoint68i/pkg/aim_v23/AIM2DYN.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_CO2.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_FFIELDS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_GRID.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_OPTIONS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_PARAMS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_SIZE.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_TAVE.h MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2dyn.F MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2land.F MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2sioce.F MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics.F MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics_init.F MITgcm-checkpoint68i/pkg/aim_v23/aim_do_co2.F MITgcm-checkpoint68i/pkg/aim_v23/aim_do_physics.F MITgcm-checkpoint68i/pkg/aim_v23/aim_dyn2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_fields_load.F MITgcm-checkpoint68i/pkg/aim_v23/aim_initialise.F MITgcm-checkpoint68i/pkg/aim_v23/aim_land2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_land_impl.F MITgcm-checkpoint68i/pkg/aim_v23/aim_mnc_init.F MITgcm-checkpoint68i/pkg/aim_v23/aim_readparms.F MITgcm-checkpoint68i/pkg/aim_v23/aim_sice2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_sice_impl.F MITgcm-checkpoint68i/pkg/aim_v23/aim_surf_bc.F MITgcm-checkpoint68i/pkg/aim_v23/aim_tendency_apply.F MITgcm-checkpoint68i/pkg/aim_v23/aim_v23_description.tex MITgcm-checkpoint68i/pkg/aim_v23/aim_write_local.F MITgcm-checkpoint68i/pkg/aim_v23/aim_write_phys.F MITgcm-checkpoint68i/pkg/aim_v23/aim_write_tave.F MITgcm-checkpoint68i/pkg/aim_v23/com_cnvcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_forcing.h MITgcm-checkpoint68i/pkg/aim_v23/com_forcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_lsccon.h MITgcm-checkpoint68i/pkg/aim_v23/com_physcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_physvar.h MITgcm-checkpoint68i/pkg/aim_v23/com_radcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_radvar.h MITgcm-checkpoint68i/pkg/aim_v23/com_sflcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_vdicon.h MITgcm-checkpoint68i/pkg/aim_v23/phy_const.h MITgcm-checkpoint68i/pkg/aim_v23/phy_convmf.F MITgcm-checkpoint68i/pkg/aim_v23/phy_driver.F MITgcm-checkpoint68i/pkg/aim_v23/phy_inphys.F MITgcm-checkpoint68i/pkg/aim_v23/phy_lscond.F MITgcm-checkpoint68i/pkg/aim_v23/phy_radiat.F MITgcm-checkpoint68i/pkg/aim_v23/phy_shtorh.F MITgcm-checkpoint68i/pkg/aim_v23/phy_snow_precip.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_land.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_ocean.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_post.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_prep.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_sice.F MITgcm-checkpoint68i/pkg/aim_v23/phy_vdifsc.F MITgcm-checkpoint68i/pkg/atm2d/ MITgcm-checkpoint68i/pkg/atm2d/AGRID.h MITgcm-checkpoint68i/pkg/atm2d/ATM2D_OPTIONS.h MITgcm-checkpoint68i/pkg/atm2d/ATM2D_VARS.h MITgcm-checkpoint68i/pkg/atm2d/ATMSIZE.h MITgcm-checkpoint68i/pkg/atm2d/CPLIDS.h MITgcm-checkpoint68i/pkg/atm2d/DRIVER.h MITgcm-checkpoint68i/pkg/atm2d/OCNIDS.h MITgcm-checkpoint68i/pkg/atm2d/OCNSIZE.h MITgcm-checkpoint68i/pkg/atm2d/OCNVARS.h MITgcm-checkpoint68i/pkg/atm2d/accept_component_registrations.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_finish.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_init_fixed.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_init_vars.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_read_pickup.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_readparms.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_write_pickup.F MITgcm-checkpoint68i/pkg/atm2d/atm2ocn_main.F MITgcm-checkpoint68i/pkg/atm2d/calc_1dto2d.F MITgcm-checkpoint68i/pkg/atm2d/calc_fileload.F MITgcm-checkpoint68i/pkg/atm2d/calc_zonal_means.F MITgcm-checkpoint68i/pkg/atm2d/cpl_recv_ocn_fields.F MITgcm-checkpoint68i/pkg/atm2d/cpl_recv_ocn_ocnconfig.F MITgcm-checkpoint68i/pkg/atm2d/cpl_register_ocn.F MITgcm-checkpoint68i/pkg/atm2d/cpl_send_ocn_atmconfig.F MITgcm-checkpoint68i/pkg/atm2d/cpl_send_ocn_fields.F MITgcm-checkpoint68i/pkg/atm2d/ctrparam.h MITgcm-checkpoint68i/pkg/atm2d/exch_component_configs.F MITgcm-checkpoint68i/pkg/atm2d/fixed_flux_add.F MITgcm-checkpoint68i/pkg/atm2d/forward_step_atm2d.F MITgcm-checkpoint68i/pkg/atm2d/get_ocnvars.F MITgcm-checkpoint68i/pkg/atm2d/init_atm2d.F MITgcm-checkpoint68i/pkg/atm2d/init_sumvars.F MITgcm-checkpoint68i/pkg/atm2d/initialise.F MITgcm-checkpoint68i/pkg/atm2d/month_end_diags.F MITgcm-checkpoint68i/pkg/atm2d/norm_ocn_fluxes.F MITgcm-checkpoint68i/pkg/atm2d/pass_thsice_fluxes.F MITgcm-checkpoint68i/pkg/atm2d/put_ocnvars.F MITgcm-checkpoint68i/pkg/atm2d/read_atmos.F MITgcm-checkpoint68i/pkg/atm2d/relax_add.F MITgcm-checkpoint68i/pkg/atm2d/subtract_means.F MITgcm-checkpoint68i/pkg/atm2d/sum_ocn_fluxes.F MITgcm-checkpoint68i/pkg/atm2d/sum_thsice_out.F MITgcm-checkpoint68i/pkg/atm2d/sum_yr_end_diags.F MITgcm-checkpoint68i/pkg/atm2d/tave_end_diags.F MITgcm-checkpoint68i/pkg/atm2d/yr_end_diags.F MITgcm-checkpoint68i/pkg/atm_common/ MITgcm-checkpoint68i/pkg/atm_common/ATM_COMMON_OPTIONS.h MITgcm-checkpoint68i/pkg/atm_common/atm_diagnostics_init.F MITgcm-checkpoint68i/pkg/atm_compon_interf/ 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MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev4_directives.h MITgcm-checkpoint68i/pkg/autodiff/common.flow MITgcm-checkpoint68i/pkg/autodiff/copy_ad_uv_outp.F MITgcm-checkpoint68i/pkg/autodiff/copy_advar_outp.F MITgcm-checkpoint68i/pkg/autodiff/damp_adj.F MITgcm-checkpoint68i/pkg/autodiff/damp_adj.flow MITgcm-checkpoint68i/pkg/autodiff/dummy_for_etan.F MITgcm-checkpoint68i/pkg/autodiff/dummy_for_etan.flow MITgcm-checkpoint68i/pkg/autodiff/dummy_in_dynamics.F MITgcm-checkpoint68i/pkg/autodiff/dummy_in_dynamics.flow MITgcm-checkpoint68i/pkg/autodiff/dummy_in_stepping.F MITgcm-checkpoint68i/pkg/autodiff/dummy_in_stepping.flow MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xy.F MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xy_uv.F MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xyz.F MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xyz_uv.F MITgcm-checkpoint68i/pkg/autodiff/g_common.h MITgcm-checkpoint68i/pkg/autodiff/g_dummy_for_etan.F MITgcm-checkpoint68i/pkg/autodiff/g_dummy_in_dynamics.F 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MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/bling/bling_ad_diff.list MITgcm-checkpoint68i/pkg/bling/bling_airseaflux.F MITgcm-checkpoint68i/pkg/bling/bling_bio.F MITgcm-checkpoint68i/pkg/bling/bling_bio_nitrogen.F MITgcm-checkpoint68i/pkg/bling/bling_carbon_chem.F MITgcm-checkpoint68i/pkg/bling/bling_carbonate_init.F MITgcm-checkpoint68i/pkg/bling/bling_carbonate_sys.F MITgcm-checkpoint68i/pkg/bling/bling_description.txt MITgcm-checkpoint68i/pkg/bling/bling_diagnostics_init.F MITgcm-checkpoint68i/pkg/bling/bling_fields_load.F MITgcm-checkpoint68i/pkg/bling/bling_ini_forcing.F MITgcm-checkpoint68i/pkg/bling/bling_init_fixed.F MITgcm-checkpoint68i/pkg/bling/bling_init_varia.F MITgcm-checkpoint68i/pkg/bling/bling_light.F MITgcm-checkpoint68i/pkg/bling/bling_main.F MITgcm-checkpoint68i/pkg/bling/bling_min_val.F MITgcm-checkpoint68i/pkg/bling/bling_mixedlayer.F MITgcm-checkpoint68i/pkg/bling/bling_read_pickup.F 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MITgcm-checkpoint68i/pkg/bulk_force/bulkf_init_varia.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_output.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_readparms.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_sh2rh_aim.F MITgcm-checkpoint68i/pkg/cal/ MITgcm-checkpoint68i/pkg/cal/CAL_OPTIONS.h MITgcm-checkpoint68i/pkg/cal/cal.h MITgcm-checkpoint68i/pkg/cal/cal_ad_diff.list MITgcm-checkpoint68i/pkg/cal/cal_addtime.F MITgcm-checkpoint68i/pkg/cal/cal_checkdate.F MITgcm-checkpoint68i/pkg/cal/cal_compdates.F MITgcm-checkpoint68i/pkg/cal/cal_convdate.F MITgcm-checkpoint68i/pkg/cal/cal_copydate.F MITgcm-checkpoint68i/pkg/cal/cal_daysformonth.F MITgcm-checkpoint68i/pkg/cal/cal_dayspermonth.F MITgcm-checkpoint68i/pkg/cal/cal_description.tex MITgcm-checkpoint68i/pkg/cal/cal_fulldate.F MITgcm-checkpoint68i/pkg/cal/cal_getdate.F MITgcm-checkpoint68i/pkg/cal/cal_getmonthsrec.F MITgcm-checkpoint68i/pkg/cal/cal_init_fixed.F MITgcm-checkpoint68i/pkg/cal/cal_intdays.F 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MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_diff.list MITgcm-checkpoint68i/pkg/cfc/cfc_atmos.F MITgcm-checkpoint68i/pkg/cfc/cfc_check.F MITgcm-checkpoint68i/pkg/cfc/cfc_fields_load.F MITgcm-checkpoint68i/pkg/cfc/cfc_param.F MITgcm-checkpoint68i/pkg/cfc/cfc_readparms.F MITgcm-checkpoint68i/pkg/cfc/cfc_tr_register.F MITgcm-checkpoint68i/pkg/cheapaml/ MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML.h MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML_OPTIONS.h MITgcm-checkpoint68i/pkg/cheapaml/cheapaml.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_calc_rhs.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_coare3_flux.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_copy_edges.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_diagnostics_init.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_fields_load.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_fixed.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_varia.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_lanl_flux.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_read_pickup.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_readparms.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_seaice.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_timestep.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_write_pickup.F MITgcm-checkpoint68i/pkg/chronos/ MITgcm-checkpoint68i/pkg/chronos/chronos.F MITgcm-checkpoint68i/pkg/chronos/chronos.h MITgcm-checkpoint68i/pkg/compon_communic/ MITgcm-checkpoint68i/pkg/compon_communic/CPLR_SIG.h MITgcm-checkpoint68i/pkg/compon_communic/comprecv_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/generate_tag.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_init.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_tile_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_init.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_tile_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_all_check.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2dbl.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2int.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2real.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_dbl2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init1.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2a.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2b.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_initcomp.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_int2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_match_comp.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_real2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_sortranks.F MITgcm-checkpoint68i/pkg/cost/ MITgcm-checkpoint68i/pkg/cost/COST_OPTIONS.h MITgcm-checkpoint68i/pkg/cost/adcost.h MITgcm-checkpoint68i/pkg/cost/cost.h MITgcm-checkpoint68i/pkg/cost/cost_accumulate_mean.F MITgcm-checkpoint68i/pkg/cost/cost_ad.flow MITgcm-checkpoint68i/pkg/cost/cost_ad_diff.list MITgcm-checkpoint68i/pkg/cost/cost_atlantic_heat.F MITgcm-checkpoint68i/pkg/cost/cost_check.F MITgcm-checkpoint68i/pkg/cost/cost_dependent_init.F MITgcm-checkpoint68i/pkg/cost/cost_depth.F MITgcm-checkpoint68i/pkg/cost/cost_final.F MITgcm-checkpoint68i/pkg/cost/cost_final_restore.F MITgcm-checkpoint68i/pkg/cost/cost_final_store.F MITgcm-checkpoint68i/pkg/cost/cost_init_varia.F MITgcm-checkpoint68i/pkg/cost/cost_readparms.F MITgcm-checkpoint68i/pkg/cost/cost_state_final.F MITgcm-checkpoint68i/pkg/cost/cost_test.F MITgcm-checkpoint68i/pkg/cost/cost_tile.F MITgcm-checkpoint68i/pkg/cost/cost_tracer.F MITgcm-checkpoint68i/pkg/cost/cost_vector.F MITgcm-checkpoint68i/pkg/cost/g_cost.h MITgcm-checkpoint68i/pkg/ctrl/ MITgcm-checkpoint68i/pkg/ctrl/CTRL_FIELDS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_GENARR.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_OBCS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_OPTIONS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_SIZE.h MITgcm-checkpoint68i/pkg/ctrl/adctrl_bound.F MITgcm-checkpoint68i/pkg/ctrl/ctrl.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_diff.list MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.flow MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound_tl.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_check.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_driver.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_depth_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_description.tex MITgcm-checkpoint68i/pkg/ctrl/ctrl_dummy.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen_rec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_mask.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcse.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsn.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcss.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsw.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getrec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_hfacc_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_ctrlvar.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_obcs_variables.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_rec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_variables.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_wet.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_local_params.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_forcing.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_genarr.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_gentim2d.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_ecco.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_genarr.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gentim2d.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_pack.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_readparms.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_fname.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_smooth.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_summary.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_swapffields.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_toolbox.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_unpack.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_weights.h MITgcm-checkpoint68i/pkg/ctrl/optim.h MITgcm-checkpoint68i/pkg/ctrl/optim_readparms.F MITgcm-checkpoint68i/pkg/debug/ MITgcm-checkpoint68i/pkg/debug/DEBUG_OPTIONS.h MITgcm-checkpoint68i/pkg/debug/chksum_tiled.F MITgcm-checkpoint68i/pkg/debug/debug_ad.flow MITgcm-checkpoint68i/pkg/debug/debug_call.F MITgcm-checkpoint68i/pkg/debug/debug_cs_corner_uv.F MITgcm-checkpoint68i/pkg/debug/debug_enter.F MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rl.F MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rs.F MITgcm-checkpoint68i/pkg/debug/debug_leave.F MITgcm-checkpoint68i/pkg/debug/debug_msg.F MITgcm-checkpoint68i/pkg/debug/debug_stats_rl.F MITgcm-checkpoint68i/pkg/debug/debug_stats_rs.F MITgcm-checkpoint68i/pkg/debug/fill_in_corners_rl.F MITgcm-checkpoint68i/pkg/debug/write_fullarray_rl.F MITgcm-checkpoint68i/pkg/debug/write_fullarray_rs.F MITgcm-checkpoint68i/pkg/diagnostics/ MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_CALC.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_SIZE.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGSTATS_REGIONS.h MITgcm-checkpoint68i/pkg/diagnostics/DIAG_OPTIONS.h MITgcm-checkpoint68i/pkg/diagnostics/diag_calc_psivel.F MITgcm-checkpoint68i/pkg/diagnostics/diag_cg2d.F MITgcm-checkpoint68i/pkg/diagnostics/diag_vegtile_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad.flow MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad_diff.list MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_addtolist.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_calc_phivel.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_check.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_clear.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_field.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_rs.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_state.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fract_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ini_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_early.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_fixed.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_varia.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_p2p.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_vert.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_is_on.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_list_check.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_main_init.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_mnc_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_read_pickup.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_readparms.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill_rs.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_levels.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_pointers.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_setdiag.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_status_error.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_sum_levels.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_summary.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_switch_onoff.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_utils.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_adj.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_pickup.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ascii_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_clear.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_close_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_global.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ini_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_local.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_mnc_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_others_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_output.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_pointers.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_regions.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_setdiag.F MITgcm-checkpoint68i/pkg/dic/ MITgcm-checkpoint68i/pkg/dic/DIC_ATMOS.h MITgcm-checkpoint68i/pkg/dic/DIC_COST.h MITgcm-checkpoint68i/pkg/dic/DIC_CTRL.h MITgcm-checkpoint68i/pkg/dic/DIC_LOAD.h MITgcm-checkpoint68i/pkg/dic/DIC_OPTIONS.h MITgcm-checkpoint68i/pkg/dic/DIC_VARS.h MITgcm-checkpoint68i/pkg/dic/alk_surfforcing.F MITgcm-checkpoint68i/pkg/dic/bio_export.F MITgcm-checkpoint68i/pkg/dic/calcite_saturation.F MITgcm-checkpoint68i/pkg/dic/car_flux.F MITgcm-checkpoint68i/pkg/dic/car_flux_omega_top.F MITgcm-checkpoint68i/pkg/dic/carbon_chem.F MITgcm-checkpoint68i/pkg/dic/dic_ad.flow MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_diff.list MITgcm-checkpoint68i/pkg/dic/dic_atmos.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_diags.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_forcing.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_init.F MITgcm-checkpoint68i/pkg/dic/dic_cost.F MITgcm-checkpoint68i/pkg/dic/dic_diagnostics_init.F MITgcm-checkpoint68i/pkg/dic/dic_fields_load.F MITgcm-checkpoint68i/pkg/dic/dic_fields_update.F MITgcm-checkpoint68i/pkg/dic/dic_ini_atmos.F MITgcm-checkpoint68i/pkg/dic/dic_ini_forcing.F MITgcm-checkpoint68i/pkg/dic/dic_init_fixed.F MITgcm-checkpoint68i/pkg/dic/dic_init_varia.F MITgcm-checkpoint68i/pkg/dic/dic_mnc_init.F MITgcm-checkpoint68i/pkg/dic/dic_read_co2_pickup.F MITgcm-checkpoint68i/pkg/dic/dic_read_pickup.F MITgcm-checkpoint68i/pkg/dic/dic_readparms.F MITgcm-checkpoint68i/pkg/dic/dic_set_control.F MITgcm-checkpoint68i/pkg/dic/dic_solvesaphe.F MITgcm-checkpoint68i/pkg/dic/dic_store_fluxco2.F MITgcm-checkpoint68i/pkg/dic/dic_surfforcing.F MITgcm-checkpoint68i/pkg/dic/dic_surfforcing_init.F MITgcm-checkpoint68i/pkg/dic/dic_tr_register.F MITgcm-checkpoint68i/pkg/dic/dic_write_pickup.F MITgcm-checkpoint68i/pkg/dic/fe_chem.F MITgcm-checkpoint68i/pkg/dic/insol.F MITgcm-checkpoint68i/pkg/dic/o2_surfforcing.F MITgcm-checkpoint68i/pkg/dic/phos_flux.F MITgcm-checkpoint68i/pkg/down_slope/ MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_OPTIONS.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_PARAMS.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_SIZE.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_VARS.h MITgcm-checkpoint68i/pkg/down_slope/dwnslp_ad_diff.list MITgcm-checkpoint68i/pkg/down_slope/dwnslp_apply.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_flow.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_rho.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_diagnostics_init.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_fixed.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_varia.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_readparms.F MITgcm-checkpoint68i/pkg/ebm/ MITgcm-checkpoint68i/pkg/ebm/EBM.h MITgcm-checkpoint68i/pkg/ebm/EBM_OPTIONS.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_diff.list MITgcm-checkpoint68i/pkg/ebm/ebm_area_t.F MITgcm-checkpoint68i/pkg/ebm/ebm_atmosphere.F MITgcm-checkpoint68i/pkg/ebm/ebm_driver.F MITgcm-checkpoint68i/pkg/ebm/ebm_ini_vars.F MITgcm-checkpoint68i/pkg/ebm/ebm_load_climatology.F MITgcm-checkpoint68i/pkg/ebm/ebm_readparms.F MITgcm-checkpoint68i/pkg/ebm/ebm_wind_perturb.F MITgcm-checkpoint68i/pkg/ebm/ebm_zonalmean.F MITgcm-checkpoint68i/pkg/ecco/ MITgcm-checkpoint68i/pkg/ecco/ECCO.h MITgcm-checkpoint68i/pkg/ecco/ECCO_OPTIONS.h MITgcm-checkpoint68i/pkg/ecco/ECCO_SIZE.h MITgcm-checkpoint68i/pkg/ecco/cost_averagesfields.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesflags.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesgeneric.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesinit.F MITgcm-checkpoint68i/pkg/ecco/cost_bp_read.F MITgcm-checkpoint68i/pkg/ecco/cost_forcing.F MITgcm-checkpoint68i/pkg/ecco/cost_gencal.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_all.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_assignperiod.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_boxmean.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_bpv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_customize.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_glbmean.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_moc.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_seaicev4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sshv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sstv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_transp.F MITgcm-checkpoint68i/pkg/ecco/cost_generic.F MITgcm-checkpoint68i/pkg/ecco/cost_genread.F MITgcm-checkpoint68i/pkg/ecco/cost_hyd.F MITgcm-checkpoint68i/pkg/ecco/cost_internal_params.F MITgcm-checkpoint68i/pkg/ecco/cost_obcs.F MITgcm-checkpoint68i/pkg/ecco/cost_obcs_ageos.F MITgcm-checkpoint68i/pkg/ecco/cost_obcse.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsn.F MITgcm-checkpoint68i/pkg/ecco/cost_obcss.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsvol.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsw.F MITgcm-checkpoint68i/pkg/ecco/cost_sla_read.F MITgcm-checkpoint68i/pkg/ecco/cost_sla_read_yd.F MITgcm-checkpoint68i/pkg/ecco/cost_ssh.F MITgcm-checkpoint68i/pkg/ecco/ecco_ad.flow MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_diff.list MITgcm-checkpoint68i/pkg/ecco/ecco_check.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost.h MITgcm-checkpoint68i/pkg/ecco/ecco_cost_driver.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_final.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_barfiles.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_fixed.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_varia.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_summary.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_weights.F MITgcm-checkpoint68i/pkg/ecco/ecco_diagnostics_init.F MITgcm-checkpoint68i/pkg/ecco/ecco_init_fixed.F MITgcm-checkpoint68i/pkg/ecco/ecco_init_varia.F MITgcm-checkpoint68i/pkg/ecco/ecco_local_params.h MITgcm-checkpoint68i/pkg/ecco/ecco_phys.F MITgcm-checkpoint68i/pkg/ecco/ecco_readparms.F MITgcm-checkpoint68i/pkg/ecco/ecco_summary.F MITgcm-checkpoint68i/pkg/ecco/ecco_toolbox.F MITgcm-checkpoint68i/pkg/ecco/stergloh_output.F MITgcm-checkpoint68i/pkg/embed_files/ MITgcm-checkpoint68i/pkg/embed_files/EMBED_FILES_OPTIONS.h MITgcm-checkpoint68i/pkg/embed_files/README.txt MITgcm-checkpoint68i/pkg/embed_files/decode_files.c MITgcm-checkpoint68i/pkg/embed_files/embed_files_init.F MITgcm-checkpoint68i/pkg/exch2/ MITgcm-checkpoint68i/pkg/exch2/Makefile MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_BUFFER.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_PARAMS.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_SIZE.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_TOPOLOGY.h MITgcm-checkpoint68i/pkg/exch2/W2_OPTIONS.h MITgcm-checkpoint68i/pkg/exch2/exch2.flow MITgcm-checkpoint68i/pkg/exch2/exch2_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_diff.list MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_check_depths.F MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_get_scal_bounds.F MITgcm-checkpoint68i/pkg/exch2/exch2_get_uv_bounds.F MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube_ad.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube_ad.template MITgcm-checkpoint68i/pkg/exch2/exch2_s3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_sm_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_agrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_bgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_cgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_dgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_z_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/w2_cumulsum_z_tile.F MITgcm-checkpoint68i/pkg/exch2/w2_e2setup.F MITgcm-checkpoint68i/pkg/exch2/w2_eeboot.F MITgcm-checkpoint68i/pkg/exch2/w2_map_procs.F MITgcm-checkpoint68i/pkg/exch2/w2_print_comm_sequence.F MITgcm-checkpoint68i/pkg/exch2/w2_print_e2setup.F MITgcm-checkpoint68i/pkg/exch2/w2_readparms.F MITgcm-checkpoint68i/pkg/exch2/w2_set_cs6_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_f2f_index.F MITgcm-checkpoint68i/pkg/exch2/w2_set_gen_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_map_cumsum.F MITgcm-checkpoint68i/pkg/exch2/w2_set_map_tiles.F MITgcm-checkpoint68i/pkg/exch2/w2_set_myown_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_single_facet.F MITgcm-checkpoint68i/pkg/exch2/w2_set_tile2tiles.F MITgcm-checkpoint68i/pkg/exf/ MITgcm-checkpoint68i/pkg/exf/EXF_CONSTANTS.h MITgcm-checkpoint68i/pkg/exf/EXF_FIELDS.h MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_PARAM.h MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_SIZE.h MITgcm-checkpoint68i/pkg/exf/EXF_OPTIONS.h MITgcm-checkpoint68i/pkg/exf/EXF_PARAM.h MITgcm-checkpoint68i/pkg/exf/TODO.txt MITgcm-checkpoint68i/pkg/exf/exf_ad.flow MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_diff.list MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots.F MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots__g.F MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots_ad.F MITgcm-checkpoint68i/pkg/exf/exf_bulkformulae.F MITgcm-checkpoint68i/pkg/exf/exf_check.F MITgcm-checkpoint68i/pkg/exf/exf_check_range.F MITgcm-checkpoint68i/pkg/exf/exf_description.tex MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_fill.F MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_init.F MITgcm-checkpoint68i/pkg/exf/exf_filter_rl.F MITgcm-checkpoint68i/pkg/exf/exf_getclim.F MITgcm-checkpoint68i/pkg/exf/exf_getffield_start.F MITgcm-checkpoint68i/pkg/exf/exf_getffieldrec.F MITgcm-checkpoint68i/pkg/exf/exf_getffields.F MITgcm-checkpoint68i/pkg/exf/exf_getfield_start.F MITgcm-checkpoint68i/pkg/exf/exf_getforcing.F MITgcm-checkpoint68i/pkg/exf/exf_getmonthsrec.F MITgcm-checkpoint68i/pkg/exf/exf_getsurfacefluxes.F MITgcm-checkpoint68i/pkg/exf/exf_getyearlyfieldname.F MITgcm-checkpoint68i/pkg/exf/exf_init_fixed.F MITgcm-checkpoint68i/pkg/exf/exf_init_fld.F MITgcm-checkpoint68i/pkg/exf/exf_init_interp.F MITgcm-checkpoint68i/pkg/exf/exf_init_varia.F MITgcm-checkpoint68i/pkg/exf/exf_interp.F MITgcm-checkpoint68i/pkg/exf/exf_interp_read.F MITgcm-checkpoint68i/pkg/exf/exf_interp_uv.F MITgcm-checkpoint68i/pkg/exf/exf_interpolate.F MITgcm-checkpoint68i/pkg/exf/exf_mapfields.F MITgcm-checkpoint68i/pkg/exf/exf_monitor.F MITgcm-checkpoint68i/pkg/exf/exf_monitor_ad.F MITgcm-checkpoint68i/pkg/exf/exf_radiation.F MITgcm-checkpoint68i/pkg/exf/exf_readparms.F MITgcm-checkpoint68i/pkg/exf/exf_set_fld.F MITgcm-checkpoint68i/pkg/exf/exf_set_gen.F MITgcm-checkpoint68i/pkg/exf/exf_set_obcs.F MITgcm-checkpoint68i/pkg/exf/exf_set_uv.F MITgcm-checkpoint68i/pkg/exf/exf_summary.F MITgcm-checkpoint68i/pkg/exf/exf_swapffields.F MITgcm-checkpoint68i/pkg/exf/exf_weight_sfx_diags.F MITgcm-checkpoint68i/pkg/exf/exf_wind.F MITgcm-checkpoint68i/pkg/exf/exf_zenithangle.F MITgcm-checkpoint68i/pkg/exf/exf_zenithangle_table.F MITgcm-checkpoint68i/pkg/fizhi/ MITgcm-checkpoint68i/pkg/fizhi/AtoC.F MITgcm-checkpoint68i/pkg/fizhi/CtoA.F MITgcm-checkpoint68i/pkg/fizhi/FIZHI_OPTIONS.h MITgcm-checkpoint68i/pkg/fizhi/cah-dat.h MITgcm-checkpoint68i/pkg/fizhi/cai-dat.h MITgcm-checkpoint68i/pkg/fizhi/chronos.h MITgcm-checkpoint68i/pkg/fizhi/co2-tran3.h MITgcm-checkpoint68i/pkg/fizhi/do_fizhi.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_SHP.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_SIZE.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_alarms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_chemistry_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_clockstuff.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagalarms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagnostics_init.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_driver.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_earth_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_fillnegs.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_gwdrag.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_chem.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_fixed.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vars.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_veg.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vegsurftiles.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_io_comms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_SIZE.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_lsm.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_lwrad.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_mnc_init.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_moist.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_mpistuff.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_ocean_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_rayleigh.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_read_pickup.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_readparms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_readwrite_vegtiles.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_step_diag.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_swrad.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_tendency_apply.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_turb.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_update_time.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_utils.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_wrapper.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_datetime.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_pickup.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_state.F MITgcm-checkpoint68i/pkg/fizhi/getcon.F MITgcm-checkpoint68i/pkg/fizhi/getpwhere.F MITgcm-checkpoint68i/pkg/fizhi/h2o-tran3.h MITgcm-checkpoint68i/pkg/fizhi/o3-tran3.h MITgcm-checkpoint68i/pkg/fizhi/sibber.h MITgcm-checkpoint68i/pkg/fizhi/slprs.F MITgcm-checkpoint68i/pkg/fizhi/snwmid.h MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_corr.F MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_fg.F MITgcm-checkpoint68i/pkg/fizhi/step_physics.F MITgcm-checkpoint68i/pkg/fizhi/update_chemistry_exports.F MITgcm-checkpoint68i/pkg/fizhi/update_earth_exports.F MITgcm-checkpoint68i/pkg/fizhi/update_ocean_exports.F MITgcm-checkpoint68i/pkg/flt/ MITgcm-checkpoint68i/pkg/flt/FLT.h MITgcm-checkpoint68i/pkg/flt/FLT_BUFF.h MITgcm-checkpoint68i/pkg/flt/FLT_OPTIONS.h MITgcm-checkpoint68i/pkg/flt/FLT_SIZE.h MITgcm-checkpoint68i/pkg/flt/README.flt MITgcm-checkpoint68i/pkg/flt/exch2_recv_get_vec.F MITgcm-checkpoint68i/pkg/flt/exch2_send_put_vec.F MITgcm-checkpoint68i/pkg/flt/exch_recv_get_vec.F MITgcm-checkpoint68i/pkg/flt/exch_send_put_vec.F MITgcm-checkpoint68i/pkg/flt/flt_down.F MITgcm-checkpoint68i/pkg/flt/flt_exch2.F MITgcm-checkpoint68i/pkg/flt/flt_exchg.F MITgcm-checkpoint68i/pkg/flt/flt_init_fixed.F MITgcm-checkpoint68i/pkg/flt/flt_init_varia.F MITgcm-checkpoint68i/pkg/flt/flt_interp_linear.F MITgcm-checkpoint68i/pkg/flt/flt_main.F MITgcm-checkpoint68i/pkg/flt/flt_mapping.F MITgcm-checkpoint68i/pkg/flt/flt_readparms.F MITgcm-checkpoint68i/pkg/flt/flt_runga2.F MITgcm-checkpoint68i/pkg/flt/flt_runga4.F MITgcm-checkpoint68i/pkg/flt/flt_traj.F MITgcm-checkpoint68i/pkg/flt/flt_up.F MITgcm-checkpoint68i/pkg/flt/flt_write_pickup.F MITgcm-checkpoint68i/pkg/frazil/ MITgcm-checkpoint68i/pkg/frazil/FRAZIL.h MITgcm-checkpoint68i/pkg/frazil/FRAZIL_OPTIONS.h MITgcm-checkpoint68i/pkg/frazil/frazil_ad.flow MITgcm-checkpoint68i/pkg/frazil/frazil_ad_diff.list MITgcm-checkpoint68i/pkg/frazil/frazil_calc_rhs.F MITgcm-checkpoint68i/pkg/frazil/frazil_description.tex MITgcm-checkpoint68i/pkg/frazil/frazil_diagnostics_init.F MITgcm-checkpoint68i/pkg/frazil/frazil_init_fixed.F MITgcm-checkpoint68i/pkg/frazil/frazil_init_varia.F MITgcm-checkpoint68i/pkg/frazil/frazil_tendency_apply.F MITgcm-checkpoint68i/pkg/gchem/ MITgcm-checkpoint68i/pkg/gchem/GCHEM.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_FIELDS.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_OPTIONS.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_SIZE.h MITgcm-checkpoint68i/pkg/gchem/gchem_ad_diff.list MITgcm-checkpoint68i/pkg/gchem/gchem_add_tendency.F MITgcm-checkpoint68i/pkg/gchem/gchem_calc_tendency.F MITgcm-checkpoint68i/pkg/gchem/gchem_check.F MITgcm-checkpoint68i/pkg/gchem/gchem_diagnostics_init.F MITgcm-checkpoint68i/pkg/gchem/gchem_fields_load.F MITgcm-checkpoint68i/pkg/gchem/gchem_forcing_sep.F MITgcm-checkpoint68i/pkg/gchem/gchem_init_fixed.F MITgcm-checkpoint68i/pkg/gchem/gchem_init_vari.F MITgcm-checkpoint68i/pkg/gchem/gchem_output.F MITgcm-checkpoint68i/pkg/gchem/gchem_readparms.F MITgcm-checkpoint68i/pkg/gchem/gchem_surfmean.F MITgcm-checkpoint68i/pkg/gchem/gchem_tr_register.F MITgcm-checkpoint68i/pkg/gchem/gchem_write_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/ MITgcm-checkpoint68i/pkg/generic_advdiff/GAD.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_FLUX_LIMITER.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_OPTIONS.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_SOM_VARS.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_diff.list MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advection.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advscheme.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_calc_rhs.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_check.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_del2.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_init.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_state.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_exch_som.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_implicit_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_fixed.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_varia.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_plm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_read_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_advect.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_exchanges.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_fill_cs_corner.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_lim_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_prep_cs_corner.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3c4_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_write_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/generic_advdiff.tex MITgcm-checkpoint68i/pkg/generic_advdiff/salt_fill.F MITgcm-checkpoint68i/pkg/ggl90/ MITgcm-checkpoint68i/pkg/ggl90/GGL90.h MITgcm-checkpoint68i/pkg/ggl90/GGL90_OPTIONS.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_diff.list MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_diff.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_visc.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_check.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_diagnostics_init.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_exchanges.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_idemix.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_fixed.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_varia.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_output.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_read_pickup.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_readparms.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_write_pickup.F MITgcm-checkpoint68i/pkg/gmredi/ MITgcm-checkpoint68i/pkg/gmredi/GMREDI.h MITgcm-checkpoint68i/pkg/gmredi/GMREDI_OPTIONS.h MITgcm-checkpoint68i/pkg/gmredi/GMREDI_TAVE.h MITgcm-checkpoint68i/pkg/gmredi/README_ADJOINT MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad.flow MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad_diff.list MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_bates_k.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_diff.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_eigs.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_b.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_bvp.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_qgleith.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_tensor.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_urms.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_check.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_description.tex MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_fill.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_impl.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_init.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_do_exch.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_fixed.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_varia.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_mnc_init.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_output.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_read_pickup.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_readparms.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_residual_flow.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_rtransport.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_limit.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_psi.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_write_pickup.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_xtransport.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_ytransport.F MITgcm-checkpoint68i/pkg/gmredi/submeso_calc_psi.F MITgcm-checkpoint68i/pkg/grdchk/ MITgcm-checkpoint68i/pkg/grdchk/GRDCHK_OPTIONS.h MITgcm-checkpoint68i/pkg/grdchk/grdchk.h MITgcm-checkpoint68i/pkg/grdchk/grdchk_check.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_description.tex MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_obcs_mask.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_position.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_getadxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_getxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_init.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_loc.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_main.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_print.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_readparms.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_setxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_summary.F MITgcm-checkpoint68i/pkg/gridalt/ MITgcm-checkpoint68i/pkg/gridalt/GRIDALT_OPTIONS.h MITgcm-checkpoint68i/pkg/gridalt/dyn2phys.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_diagnostics_init.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_initialise.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_mapping.h MITgcm-checkpoint68i/pkg/gridalt/gridalt_update.F MITgcm-checkpoint68i/pkg/gridalt/make_phys_grid.F MITgcm-checkpoint68i/pkg/gridalt/phys2dyn.F MITgcm-checkpoint68i/pkg/icefront/ MITgcm-checkpoint68i/pkg/icefront/ICEFRONT.h MITgcm-checkpoint68i/pkg/icefront/ICEFRONT_OPTIONS.h MITgcm-checkpoint68i/pkg/icefront/ICFSymbol.txt MITgcm-checkpoint68i/pkg/icefront/icefront_check.F MITgcm-checkpoint68i/pkg/icefront/icefront_description.tex MITgcm-checkpoint68i/pkg/icefront/icefront_diagnostics_init.F MITgcm-checkpoint68i/pkg/icefront/icefront_init_fixed.F MITgcm-checkpoint68i/pkg/icefront/icefront_init_varia.F MITgcm-checkpoint68i/pkg/icefront/icefront_readparms.F MITgcm-checkpoint68i/pkg/icefront/icefront_tendency_apply.F MITgcm-checkpoint68i/pkg/icefront/icefront_thermodynamics.F MITgcm-checkpoint68i/pkg/kl10/ MITgcm-checkpoint68i/pkg/kl10/KL10.h MITgcm-checkpoint68i/pkg/kl10/KL10_DIAGS.h MITgcm-checkpoint68i/pkg/kl10/KL10_OPTIONS.h MITgcm-checkpoint68i/pkg/kl10/KL10_TAVE.h MITgcm-checkpoint68i/pkg/kl10/kl10_calc.F MITgcm-checkpoint68i/pkg/kl10/kl10_calc_diff.F MITgcm-checkpoint68i/pkg/kl10/kl10_calc_visc.F MITgcm-checkpoint68i/pkg/kl10/kl10_check.F MITgcm-checkpoint68i/pkg/kl10/kl10_diagnostics_init.F MITgcm-checkpoint68i/pkg/kl10/kl10_init_fixed.F MITgcm-checkpoint68i/pkg/kl10/kl10_init_varia.F MITgcm-checkpoint68i/pkg/kl10/kl10_output.F MITgcm-checkpoint68i/pkg/kl10/kl10_readparms.F MITgcm-checkpoint68i/pkg/kpp/ MITgcm-checkpoint68i/pkg/kpp/KPP.h MITgcm-checkpoint68i/pkg/kpp/KPP_OPTIONS.h MITgcm-checkpoint68i/pkg/kpp/KPP_PARAMS.h MITgcm-checkpoint68i/pkg/kpp/KPP_TAVE.h MITgcm-checkpoint68i/pkg/kpp/kpp_ad_diff.list MITgcm-checkpoint68i/pkg/kpp/kpp_calc.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_ptr.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_s.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_t.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_visc.F MITgcm-checkpoint68i/pkg/kpp/kpp_check.F MITgcm-checkpoint68i/pkg/kpp/kpp_description.tex MITgcm-checkpoint68i/pkg/kpp/kpp_diagnostics_init.F MITgcm-checkpoint68i/pkg/kpp/kpp_do_exch.F MITgcm-checkpoint68i/pkg/kpp/kpp_forcing_surf.F MITgcm-checkpoint68i/pkg/kpp/kpp_init_fixed.F MITgcm-checkpoint68i/pkg/kpp/kpp_init_varia.F MITgcm-checkpoint68i/pkg/kpp/kpp_output.F MITgcm-checkpoint68i/pkg/kpp/kpp_readparms.F MITgcm-checkpoint68i/pkg/kpp/kpp_routines.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_ptr.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_s.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_t.F MITgcm-checkpoint68i/pkg/land/ MITgcm-checkpoint68i/pkg/land/LAND_OPTIONS.h MITgcm-checkpoint68i/pkg/land/LAND_PARAMS.h MITgcm-checkpoint68i/pkg/land/LAND_SIZE.h MITgcm-checkpoint68i/pkg/land/LAND_TAVE.h MITgcm-checkpoint68i/pkg/land/LAND_VARS.h MITgcm-checkpoint68i/pkg/land/land_albedo.F MITgcm-checkpoint68i/pkg/land/land_check.F MITgcm-checkpoint68i/pkg/land/land_diagnostics_init.F MITgcm-checkpoint68i/pkg/land/land_diagnostics_state.F MITgcm-checkpoint68i/pkg/land/land_do_diags.F MITgcm-checkpoint68i/pkg/land/land_impl_temp.F MITgcm-checkpoint68i/pkg/land/land_ini_vars.F MITgcm-checkpoint68i/pkg/land/land_init_fixed.F MITgcm-checkpoint68i/pkg/land/land_mnc_init.F MITgcm-checkpoint68i/pkg/land/land_monitor.F MITgcm-checkpoint68i/pkg/land/land_output.F MITgcm-checkpoint68i/pkg/land/land_read_pickup.F MITgcm-checkpoint68i/pkg/land/land_readparms.F MITgcm-checkpoint68i/pkg/land/land_stepfwd.F MITgcm-checkpoint68i/pkg/land/land_write_pickup.F MITgcm-checkpoint68i/pkg/layers/ MITgcm-checkpoint68i/pkg/layers/LAYERS.h MITgcm-checkpoint68i/pkg/layers/LAYERS_OPTIONS.h MITgcm-checkpoint68i/pkg/layers/LAYERS_SIZE.h MITgcm-checkpoint68i/pkg/layers/layers_ad_diff.list MITgcm-checkpoint68i/pkg/layers/layers_calc.F MITgcm-checkpoint68i/pkg/layers/layers_check.F MITgcm-checkpoint68i/pkg/layers/layers_diagnostics_init.F MITgcm-checkpoint68i/pkg/layers/layers_fluxcalc.F MITgcm-checkpoint68i/pkg/layers/layers_init_fixed.F MITgcm-checkpoint68i/pkg/layers/layers_init_varia.F MITgcm-checkpoint68i/pkg/layers/layers_mnc_init.F MITgcm-checkpoint68i/pkg/layers/layers_output.F MITgcm-checkpoint68i/pkg/layers/layers_readparms.F MITgcm-checkpoint68i/pkg/layers/layers_save.F MITgcm-checkpoint68i/pkg/layers/layers_thermodynamics.F MITgcm-checkpoint68i/pkg/layers/layers_wsurf_tr.F MITgcm-checkpoint68i/pkg/longstep/ MITgcm-checkpoint68i/pkg/longstep/LONGSTEP.h MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_OPTIONS.h MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_PARAMS.h MITgcm-checkpoint68i/pkg/longstep/README MITgcm-checkpoint68i/pkg/longstep/longstep_average.F MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d_fac.F MITgcm-checkpoint68i/pkg/longstep/longstep_check_iters.F MITgcm-checkpoint68i/pkg/longstep/longstep_correction_step.F MITgcm-checkpoint68i/pkg/longstep/longstep_diagnostics_init.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_fac.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_rs.F MITgcm-checkpoint68i/pkg/longstep/longstep_forcing_surf.F MITgcm-checkpoint68i/pkg/longstep/longstep_init_fixed.F MITgcm-checkpoint68i/pkg/longstep/longstep_init_varia.F MITgcm-checkpoint68i/pkg/longstep/longstep_readparms.F MITgcm-checkpoint68i/pkg/longstep/longstep_reset_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_thermodynamics.F MITgcm-checkpoint68i/pkg/matrix/ MITgcm-checkpoint68i/pkg/matrix/MATRIX.h MITgcm-checkpoint68i/pkg/matrix/MATRIX_OPTIONS.h MITgcm-checkpoint68i/pkg/matrix/matrix_init_varia.F MITgcm-checkpoint68i/pkg/matrix/matrix_output.F MITgcm-checkpoint68i/pkg/matrix/matrix_readparms.F MITgcm-checkpoint68i/pkg/matrix/matrix_store_tendency.F MITgcm-checkpoint68i/pkg/matrix/matrix_write_grid.F MITgcm-checkpoint68i/pkg/matrix/matrix_write_tendency.F MITgcm-checkpoint68i/pkg/mdsio/ MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_3D.h MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_WH.h MITgcm-checkpoint68i/pkg/mdsio/MDSIO_OPTIONS.h MITgcm-checkpoint68i/pkg/mdsio/mdsio_ad.flow MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertorl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_check4file.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_facef_read.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl_slice.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rs.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_meta.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_section.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_tape.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_whalos.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_readvec_loc.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_slice.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_segxtorx_2d.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_metafiles.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rs.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_meta.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_section.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_tape.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_whalos.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_writelocal.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_writevec_loc.F MITgcm-checkpoint68i/pkg/mnc/ MITgcm-checkpoint68i/pkg/mnc/CPP_OPTIONS.t MITgcm-checkpoint68i/pkg/mnc/MNC_BUFF.h MITgcm-checkpoint68i/pkg/mnc/MNC_COMMON.h MITgcm-checkpoint68i/pkg/mnc/MNC_OPTIONS.h MITgcm-checkpoint68i/pkg/mnc/MNC_PARAMS.h MITgcm-checkpoint68i/pkg/mnc/MNC_SIZE.h MITgcm-checkpoint68i/pkg/mnc/Makefile MITgcm-checkpoint68i/pkg/mnc/PACKAGES_CONFIG.t MITgcm-checkpoint68i/pkg/mnc/README.txt MITgcm-checkpoint68i/pkg/mnc/SIZE.t MITgcm-checkpoint68i/pkg/mnc/TESTING_README.txt MITgcm-checkpoint68i/pkg/mnc/build_netcdf_stubs MITgcm-checkpoint68i/pkg/mnc/mnc_ad.flow MITgcm-checkpoint68i/pkg/mnc/mnc_create_dir.c MITgcm-checkpoint68i/pkg/mnc/mnc_cw_citer.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_cvars.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_fsize.c MITgcm-checkpoint68i/pkg/mnc/mnc_cw_init.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_missingvals.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_model_attr.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_readwrite.template MITgcm-checkpoint68i/pkg/mnc/mnc_cw_udim.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_write_grid_info.F MITgcm-checkpoint68i/pkg/mnc/mnc_cwrapper.F MITgcm-checkpoint68i/pkg/mnc/mnc_description.tex MITgcm-checkpoint68i/pkg/mnc/mnc_dim.F MITgcm-checkpoint68i/pkg/mnc/mnc_dump.F MITgcm-checkpoint68i/pkg/mnc/mnc_file.F MITgcm-checkpoint68i/pkg/mnc/mnc_grid.F MITgcm-checkpoint68i/pkg/mnc/mnc_init.F MITgcm-checkpoint68i/pkg/mnc/mnc_readparms.F MITgcm-checkpoint68i/pkg/mnc/mnc_test_001.T MITgcm-checkpoint68i/pkg/mnc/mnc_test_002.T MITgcm-checkpoint68i/pkg/mnc/mnc_test_utils.T MITgcm-checkpoint68i/pkg/mnc/mnc_update_time.F MITgcm-checkpoint68i/pkg/mnc/mnc_utils.F MITgcm-checkpoint68i/pkg/mnc/mnc_var.F MITgcm-checkpoint68i/pkg/mnc/parse_local_info MITgcm-checkpoint68i/pkg/mnc/pre-defined_grids.txt MITgcm-checkpoint68i/pkg/mom_common/ MITgcm-checkpoint68i/pkg/mom_common/MOM_COMMON_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_common/MOM_VISC.h MITgcm-checkpoint68i/pkg/mom_common/mom_calc_3d_strain.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_absvort3.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hdiv.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hfacz.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_ke.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_relvort3.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_smag_3d.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_strain.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_tension.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_visc.F MITgcm-checkpoint68i/pkg/mom_common/mom_common_ad_diff.list MITgcm-checkpoint68i/pkg/mom_common/mom_diagnostics_init.F MITgcm-checkpoint68i/pkg/mom_common/mom_hdissip.F MITgcm-checkpoint68i/pkg/mom_common/mom_init_fixed.F MITgcm-checkpoint68i/pkg/mom_common/mom_quasihydrostatic.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_botdrag_coeff.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_implicit_r.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_rviscflux.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_uv_smag_3d.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_botdrag_coeff.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_implicit_r.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_rviscflux.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_limit.F MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_stretch.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_smag_3d.F MITgcm-checkpoint68i/pkg/mom_fluxform/ MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM.h MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_fluxform/mom_calc_rtrans.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform_ad_diff.list MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_uu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_vu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_wu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_coriolis.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_del2u.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_cylinder.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_sphere.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_xviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_yviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_uv_boundary.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_uv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_vv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_wv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_coriolis.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_del2v.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_cylinder.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_sphere.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_xviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_yviscflux.F MITgcm-checkpoint68i/pkg/mom_vecinv/ MITgcm-checkpoint68i/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv_ad_diff.list MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_del2uv.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_hdissip.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_grad_ke.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_vertshear.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_grad_ke.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_vertshear.F MITgcm-checkpoint68i/pkg/monitor/ MITgcm-checkpoint68i/pkg/monitor/MONITOR.h MITgcm-checkpoint68i/pkg/monitor/MONITOR_OPTIONS.h MITgcm-checkpoint68i/pkg/monitor/mon_advcfl.F MITgcm-checkpoint68i/pkg/monitor/mon_advcflw.F MITgcm-checkpoint68i/pkg/monitor/mon_advcflw2.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_advcfl.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_description.tex MITgcm-checkpoint68i/pkg/monitor/mon_init.F MITgcm-checkpoint68i/pkg/monitor/mon_ke.F MITgcm-checkpoint68i/pkg/monitor/mon_out.F MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_set_iounit.F MITgcm-checkpoint68i/pkg/monitor/mon_set_pref.F MITgcm-checkpoint68i/pkg/monitor/mon_solution.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_latbnd_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_surfcor.F MITgcm-checkpoint68i/pkg/monitor/mon_vort3.F MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rs.F MITgcm-checkpoint68i/pkg/monitor/monitor.F MITgcm-checkpoint68i/pkg/monitor/monitor_ad.F MITgcm-checkpoint68i/pkg/monitor/monitor_ad.flow MITgcm-checkpoint68i/pkg/monitor/monitor_description.tex MITgcm-checkpoint68i/pkg/monitor/monitor_g.F MITgcm-checkpoint68i/pkg/my82/ MITgcm-checkpoint68i/pkg/my82/MY82.h MITgcm-checkpoint68i/pkg/my82/MY82_OPTIONS.h MITgcm-checkpoint68i/pkg/my82/my82_calc.F MITgcm-checkpoint68i/pkg/my82/my82_calc_diff.F MITgcm-checkpoint68i/pkg/my82/my82_calc_visc.F MITgcm-checkpoint68i/pkg/my82/my82_check.F MITgcm-checkpoint68i/pkg/my82/my82_diagnostics_init.F MITgcm-checkpoint68i/pkg/my82/my82_init_fixed.F MITgcm-checkpoint68i/pkg/my82/my82_init_varia.F MITgcm-checkpoint68i/pkg/my82/my82_output.F MITgcm-checkpoint68i/pkg/my82/my82_readparms.F MITgcm-checkpoint68i/pkg/my82/my82_ri_number.F MITgcm-checkpoint68i/pkg/mypackage/ MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE.h MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE_OPTIONS.h MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad.flow MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad_diff.list MITgcm-checkpoint68i/pkg/mypackage/mypackage_calc_rhs.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_check.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_description.tex MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_init.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_state.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_fixed.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_varia.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_mnc_init.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_read_pickup.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_readparms.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_tendency_apply.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_write_pickup.F MITgcm-checkpoint68i/pkg/obcs/ MITgcm-checkpoint68i/pkg/obcs/OBCS_FIELDS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_GRID.h MITgcm-checkpoint68i/pkg/obcs/OBCS_OPTIONS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_PARAMS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_PTRACERS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_SEAICE.h MITgcm-checkpoint68i/pkg/obcs/ORLANSKI.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad.flow MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_diff.list MITgcm-checkpoint68i/pkg/obcs/obcs_add_tides.F MITgcm-checkpoint68i/pkg/obcs/obcs_adjust.F MITgcm-checkpoint68i/pkg/obcs/obcs_adjust_uvice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_eta.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ptracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_r_star.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_seaice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_surf_dr.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ts.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uv.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uvice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_w.F MITgcm-checkpoint68i/pkg/obcs/obcs_balance_flow.F MITgcm-checkpoint68i/pkg/obcs/obcs_calc.F MITgcm-checkpoint68i/pkg/obcs/obcs_calc_stevens.F MITgcm-checkpoint68i/pkg/obcs/obcs_check.F MITgcm-checkpoint68i/pkg/obcs/obcs_check_depths.F MITgcm-checkpoint68i/pkg/obcs/obcs_copy_tracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_copy_uv_n.F MITgcm-checkpoint68i/pkg/obcs/obcs_description.tex MITgcm-checkpoint68i/pkg/obcs/obcs_diag_balance.F MITgcm-checkpoint68i/pkg/obcs/obcs_exchanges.F MITgcm-checkpoint68i/pkg/obcs/obcs_exf_load.F MITgcm-checkpoint68i/pkg/obcs/obcs_fields_load.F MITgcm-checkpoint68i/pkg/obcs/obcs_init_fixed.F MITgcm-checkpoint68i/pkg/obcs/obcs_init_variables.F MITgcm-checkpoint68i/pkg/obcs/obcs_mon_stats.F MITgcm-checkpoint68i/pkg/obcs/obcs_monitor.F MITgcm-checkpoint68i/pkg/obcs/obcs_output.F MITgcm-checkpoint68i/pkg/obcs/obcs_prescribe_read.F MITgcm-checkpoint68i/pkg/obcs/obcs_read_pickup.F MITgcm-checkpoint68i/pkg/obcs/obcs_readparms.F MITgcm-checkpoint68i/pkg/obcs/obcs_save_uv_n.F MITgcm-checkpoint68i/pkg/obcs/obcs_seaice_sponge.F MITgcm-checkpoint68i/pkg/obcs/obcs_set_connect.F MITgcm-checkpoint68i/pkg/obcs/obcs_sponge.F MITgcm-checkpoint68i/pkg/obcs/obcs_u1_adv_tracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_write_pickup.F MITgcm-checkpoint68i/pkg/obcs/orlanski_east.F MITgcm-checkpoint68i/pkg/obcs/orlanski_init.F MITgcm-checkpoint68i/pkg/obcs/orlanski_north.F MITgcm-checkpoint68i/pkg/obcs/orlanski_south.F MITgcm-checkpoint68i/pkg/obcs/orlanski_west.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_PARAMS.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_TAVE.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCNCPL.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCN_CPL_OPTIONS.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_fill.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_init.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_exch_configs.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_export_import_data.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_import_cplparms.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_ini_vars.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init_fixed.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_output.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_readparms.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_register.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_write_pickup.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_apply_import.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_check_cplconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_diags.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_read_pickup.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_data.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_fields.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_ocnconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_atmconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_fields.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_store_my_data.F MITgcm-checkpoint68i/pkg/offline/ MITgcm-checkpoint68i/pkg/offline/OFFLINE.h MITgcm-checkpoint68i/pkg/offline/OFFLINE_OPTIONS.h MITgcm-checkpoint68i/pkg/offline/OFFLINE_SWITCH.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_diff.list MITgcm-checkpoint68i/pkg/offline/offline_check.F MITgcm-checkpoint68i/pkg/offline/offline_fields_load.F MITgcm-checkpoint68i/pkg/offline/offline_get_diffus.F MITgcm-checkpoint68i/pkg/offline/offline_init_varia.F MITgcm-checkpoint68i/pkg/offline/offline_readparms.F MITgcm-checkpoint68i/pkg/offline/offline_reset_parms.F MITgcm-checkpoint68i/pkg/openad/ MITgcm-checkpoint68i/pkg/openad/OPENAD_OPTIONS.h MITgcm-checkpoint68i/pkg/openad/ad_s_different_multiple.F MITgcm-checkpoint68i/pkg/openad/ad_s_ifnblnk.F MITgcm-checkpoint68i/pkg/openad/ad_s_ilnblnk.F MITgcm-checkpoint68i/pkg/openad/ad_s_mds_reclen.F MITgcm-checkpoint68i/pkg/openad/externalDummies.F MITgcm-checkpoint68i/pkg/openad/findAndDiff.bash MITgcm-checkpoint68i/pkg/openad/inner_do_loop.F MITgcm-checkpoint68i/pkg/openad/openad_ad_diff.list MITgcm-checkpoint68i/pkg/openad/openad_checkpointInit.F MITgcm-checkpoint68i/pkg/openad/openad_dumpAdjoint.F MITgcm-checkpoint68i/pkg/openad/seawater.F MITgcm-checkpoint68i/pkg/openad/the_model_main.F MITgcm-checkpoint68i/pkg/opps/ MITgcm-checkpoint68i/pkg/opps/OPPS.h MITgcm-checkpoint68i/pkg/opps/OPPS_OPTIONS.h MITgcm-checkpoint68i/pkg/opps/opps_calc.F MITgcm-checkpoint68i/pkg/opps/opps_check.F MITgcm-checkpoint68i/pkg/opps/opps_init.F MITgcm-checkpoint68i/pkg/opps/opps_interface.F MITgcm-checkpoint68i/pkg/opps/opps_readparms.F MITgcm-checkpoint68i/pkg/pkg_depend MITgcm-checkpoint68i/pkg/pkg_groups MITgcm-checkpoint68i/pkg/pp81/ MITgcm-checkpoint68i/pkg/pp81/PP81.h MITgcm-checkpoint68i/pkg/pp81/PP81_OPTIONS.h MITgcm-checkpoint68i/pkg/pp81/pp81_calc.F MITgcm-checkpoint68i/pkg/pp81/pp81_calc_diff.F MITgcm-checkpoint68i/pkg/pp81/pp81_calc_visc.F MITgcm-checkpoint68i/pkg/pp81/pp81_check.F MITgcm-checkpoint68i/pkg/pp81/pp81_diagnostics_init.F MITgcm-checkpoint68i/pkg/pp81/pp81_init_fixed.F MITgcm-checkpoint68i/pkg/pp81/pp81_init_varia.F MITgcm-checkpoint68i/pkg/pp81/pp81_output.F MITgcm-checkpoint68i/pkg/pp81/pp81_readparms.F MITgcm-checkpoint68i/pkg/pp81/pp81_ri_number.F MITgcm-checkpoint68i/pkg/profiles/ MITgcm-checkpoint68i/pkg/profiles/PROFILES_OPTIONS.h MITgcm-checkpoint68i/pkg/profiles/PROFILES_SIZE.h MITgcm-checkpoint68i/pkg/profiles/active_file_control_profiles.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.flow MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_ad.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_g.F MITgcm-checkpoint68i/pkg/profiles/cost_profiles.F MITgcm-checkpoint68i/pkg/profiles/profiles.flow MITgcm-checkpoint68i/pkg/profiles/profiles.h MITgcm-checkpoint68i/pkg/profiles/profiles_ad_diff.list MITgcm-checkpoint68i/pkg/profiles/profiles_findunit.F MITgcm-checkpoint68i/pkg/profiles/profiles_ini_io.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_fixed.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_ncfile.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_varia.F MITgcm-checkpoint68i/pkg/profiles/profiles_inloop.F MITgcm-checkpoint68i/pkg/profiles/profiles_interp.F MITgcm-checkpoint68i/pkg/profiles/profiles_readparms.F MITgcm-checkpoint68i/pkg/profiles/profiles_readvector.F MITgcm-checkpoint68i/pkg/ptracers/ MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_FIELDS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_MOD.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_OPTIONS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_PARAMS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_SIZE.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_START.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_TAVE.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad.flow MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_diff.list MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_dump.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_adcommon.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_apply_forcing.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_calc_wsurf_tr.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_check.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_check_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_convect.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_debug.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_init.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_state.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_data_mod.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_mod.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_fields_blocking_exch.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_forcing_surf.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_fixed.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_varia.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_integrate.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_mnc_init.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor_ad.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_output.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_read_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_readparms.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_reset.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_set_iolabel.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_switch_onoff.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_timeave.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_turnoff_io.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_state.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_timeave.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_zonal_filt_apply.F MITgcm-checkpoint68i/pkg/rbcs/ MITgcm-checkpoint68i/pkg/rbcs/RBCS_FIELDS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_OPTIONS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_PARAMS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_SIZE.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_diff.list MITgcm-checkpoint68i/pkg/rbcs/rbcs_add_tendency.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_fields_load.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_fixed.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_varia.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_readparms.F MITgcm-checkpoint68i/pkg/regrid/ MITgcm-checkpoint68i/pkg/regrid/Makefile MITgcm-checkpoint68i/pkg/regrid/REGRID.h MITgcm-checkpoint68i/pkg/regrid/REGRID_OPTIONS.h MITgcm-checkpoint68i/pkg/regrid/REGRID_SIZE.h MITgcm-checkpoint68i/pkg/regrid/regrid_check.F MITgcm-checkpoint68i/pkg/regrid/regrid_description.tex MITgcm-checkpoint68i/pkg/regrid/regrid_init_fixed.F MITgcm-checkpoint68i/pkg/regrid/regrid_init_varia.F MITgcm-checkpoint68i/pkg/regrid/regrid_mnc_init.F MITgcm-checkpoint68i/pkg/regrid/regrid_readparms.F MITgcm-checkpoint68i/pkg/regrid/regrid_scalar_out.template MITgcm-checkpoint68i/pkg/runclock/ MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK.h MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK_OPTIONS.h MITgcm-checkpoint68i/pkg/runclock/runclock_check.F MITgcm-checkpoint68i/pkg/runclock/runclock_continue.F MITgcm-checkpoint68i/pkg/runclock/runclock_gettime.F MITgcm-checkpoint68i/pkg/runclock/runclock_init.F MITgcm-checkpoint68i/pkg/runclock/runclock_readparms.F MITgcm-checkpoint68i/pkg/rw/ MITgcm-checkpoint68i/pkg/rw/RW_MFLDS.h MITgcm-checkpoint68i/pkg/rw/RW_OPTIONS.h MITgcm-checkpoint68i/pkg/rw/get_write_global_fld.F MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rl.F MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rs.F MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rl.F MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rs.F MITgcm-checkpoint68i/pkg/rw/read_glvec_rl.F MITgcm-checkpoint68i/pkg/rw/read_glvec_rs.F MITgcm-checkpoint68i/pkg/rw/read_mflds.F MITgcm-checkpoint68i/pkg/rw/read_rec.F MITgcm-checkpoint68i/pkg/rw/rw_ad.flow MITgcm-checkpoint68i/pkg/rw/rw_ad_diff.list MITgcm-checkpoint68i/pkg/rw/rw_get_suffix.F MITgcm-checkpoint68i/pkg/rw/set_write_global_fld.F MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rs.F MITgcm-checkpoint68i/pkg/rw/write_glvec_rl.F MITgcm-checkpoint68i/pkg/rw/write_glvec_rs.F MITgcm-checkpoint68i/pkg/rw/write_local_rl.F MITgcm-checkpoint68i/pkg/rw/write_local_rs.F MITgcm-checkpoint68i/pkg/rw/write_rec.F MITgcm-checkpoint68i/pkg/salt_plume/ MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME.h MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME_OPTIONS.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_diff.list MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_apply.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_calc_depth.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_check.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_description.tex MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_fill.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_init.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_do_exch.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_forcing_surf.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_frac.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_fixed.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_varia.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_mnc_init.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_readparms.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_s.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_t.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_volfrac.F MITgcm-checkpoint68i/pkg/sbo/ MITgcm-checkpoint68i/pkg/sbo/SBO.h MITgcm-checkpoint68i/pkg/sbo/SBO_OPTIONS.h MITgcm-checkpoint68i/pkg/sbo/sbo_calc.F MITgcm-checkpoint68i/pkg/sbo/sbo_check.F MITgcm-checkpoint68i/pkg/sbo/sbo_description.tex MITgcm-checkpoint68i/pkg/sbo/sbo_output.F MITgcm-checkpoint68i/pkg/sbo/sbo_readparms.F MITgcm-checkpoint68i/pkg/sbo/sbo_rho.F MITgcm-checkpoint68i/pkg/seaice/ MITgcm-checkpoint68i/pkg/seaice/SEAICE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_COST.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_OPTIONS.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_PARAMS.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_SIZE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_TAVE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_TRACER.h MITgcm-checkpoint68i/pkg/seaice/advect.F MITgcm-checkpoint68i/pkg/seaice/cost_ice_test.F MITgcm-checkpoint68i/pkg/seaice/diffus.F MITgcm-checkpoint68i/pkg/seaice/dynsolver.F MITgcm-checkpoint68i/pkg/seaice/lsr.F MITgcm-checkpoint68i/pkg/seaice/ostres.F MITgcm-checkpoint68i/pkg/seaice/seaice.flow MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_diff.list MITgcm-checkpoint68i/pkg/seaice/seaice_ad_dump.F MITgcm-checkpoint68i/pkg/seaice/seaice_advdiff.F MITgcm-checkpoint68i/pkg/seaice/seaice_advection.F MITgcm-checkpoint68i/pkg/seaice/seaice_bottomdrag_coeffs.F MITgcm-checkpoint68i/pkg/seaice/seaice_budget_ocean.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_ice_strength.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_lhs.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_residual.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_rhs.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_strainrates.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_stressdiv.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_viscosities.F MITgcm-checkpoint68i/pkg/seaice/seaice_check.F MITgcm-checkpoint68i/pkg/seaice/seaice_check_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_accumulate_mean.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_areasst.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_concentration.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_driver.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_export.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_final.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_fixed.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_varia.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sensi.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sss.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sst.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_weights.F MITgcm-checkpoint68i/pkg/seaice/seaice_ctrl_map_ini.F MITgcm-checkpoint68i/pkg/seaice/seaice_description.tex MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_init.F MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_state.F MITgcm-checkpoint68i/pkg/seaice/seaice_diffusion.F MITgcm-checkpoint68i/pkg/seaice/seaice_do_ridging.F MITgcm-checkpoint68i/pkg/seaice/seaice_dynsolver.F MITgcm-checkpoint68i/pkg/seaice/seaice_evp.F MITgcm-checkpoint68i/pkg/seaice/seaice_fake.F MITgcm-checkpoint68i/pkg/seaice/seaice_fgmres.F MITgcm-checkpoint68i/pkg/seaice/seaice_freedrift.F MITgcm-checkpoint68i/pkg/seaice/seaice_get_dynforcing.F MITgcm-checkpoint68i/pkg/seaice/seaice_growth.F MITgcm-checkpoint68i/pkg/seaice/seaice_growth_adx.F MITgcm-checkpoint68i/pkg/seaice/seaice_init_fixed.F MITgcm-checkpoint68i/pkg/seaice/seaice_init_varia.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_redist.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_remap.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_sum.F MITgcm-checkpoint68i/pkg/seaice/seaice_jacvec.F MITgcm-checkpoint68i/pkg/seaice/seaice_jfnk.F MITgcm-checkpoint68i/pkg/seaice/seaice_krylov.F MITgcm-checkpoint68i/pkg/seaice/seaice_lsr.F MITgcm-checkpoint68i/pkg/seaice/seaice_map_thsice.F MITgcm-checkpoint68i/pkg/seaice/seaice_mnc_init.F MITgcm-checkpoint68i/pkg/seaice/seaice_model.F MITgcm-checkpoint68i/pkg/seaice/seaice_mom_advection.F MITgcm-checkpoint68i/pkg/seaice/seaice_monitor.F MITgcm-checkpoint68i/pkg/seaice/seaice_monitor_ad.F MITgcm-checkpoint68i/pkg/seaice/seaice_obcs_output.F MITgcm-checkpoint68i/pkg/seaice/seaice_ocean_stress.F MITgcm-checkpoint68i/pkg/seaice/seaice_oceandrag_coeffs.F MITgcm-checkpoint68i/pkg/seaice/seaice_output.F MITgcm-checkpoint68i/pkg/seaice/seaice_preconditioner.F MITgcm-checkpoint68i/pkg/seaice/seaice_prepare_ridging.F MITgcm-checkpoint68i/pkg/seaice/seaice_read_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_readparms.F MITgcm-checkpoint68i/pkg/seaice/seaice_reg_ridge.F MITgcm-checkpoint68i/pkg/seaice/seaice_solve4temp.F MITgcm-checkpoint68i/pkg/seaice/seaice_summary.F MITgcm-checkpoint68i/pkg/seaice/seaice_tracer_phys.F MITgcm-checkpoint68i/pkg/seaice/seaice_turnoff_io.F MITgcm-checkpoint68i/pkg/seaice/seaice_write_pickup.F MITgcm-checkpoint68i/pkg/shap_filt/ MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT.h MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT_OPTIONS.h MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_ad_diff.list MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_ts.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_uv.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_computvort.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_diagnostics_init.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_init_fixed.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_readparms.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_relvort3.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s1.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s2.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s4.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracerold.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_u.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s1.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2c.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s4.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_v.F MITgcm-checkpoint68i/pkg/shelfice/ MITgcm-checkpoint68i/pkg/shelfice/SHELFICE.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_COST.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_OPTIONS.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_TAVE.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_diff.list MITgcm-checkpoint68i/pkg/shelfice/shelfice_check.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_accumulate.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_final.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_shifwflx.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_diagnostics_drag.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing_surf.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_depths.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_fixed.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_varia.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_mask_seaice.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_mnc_init.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_output.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_read_pickup.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_readparms.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_c_mask.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_calc_w.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_state.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_uv_mask.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remeshing.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_step_icemass.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_thermodynamics.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_u_drag_coeff.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_v_drag_coeff.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_write_pickup.F MITgcm-checkpoint68i/pkg/showflops/ MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS.h MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_INIT.h MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_OPTIONS.h MITgcm-checkpoint68i/pkg/showflops/showflops_ad.flow MITgcm-checkpoint68i/pkg/showflops/showflops_init.F MITgcm-checkpoint68i/pkg/showflops/showflops_inloop.F MITgcm-checkpoint68i/pkg/showflops/showflops_insolve.F MITgcm-checkpoint68i/pkg/smooth/ MITgcm-checkpoint68i/pkg/smooth/SMOOTH.h MITgcm-checkpoint68i/pkg/smooth/SMOOTH_OPTIONS.h MITgcm-checkpoint68i/pkg/smooth/smooth2d.F MITgcm-checkpoint68i/pkg/smooth/smooth3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_ad_diff.list MITgcm-checkpoint68i/pkg/smooth/smooth_basic2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_check.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl2dw.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_description.tex MITgcm-checkpoint68i/pkg/smooth/smooth_diff2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_diff3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_hetero2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_impldiff.F MITgcm-checkpoint68i/pkg/smooth/smooth_init2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_init3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_init_fixed.F MITgcm-checkpoint68i/pkg/smooth/smooth_init_varia.F MITgcm-checkpoint68i/pkg/smooth/smooth_readparms.F MITgcm-checkpoint68i/pkg/smooth/smooth_rhs.F MITgcm-checkpoint68i/pkg/sphere/ MITgcm-checkpoint68i/pkg/sphere/exch_all_2d_rl.F MITgcm-checkpoint68i/pkg/sphere/sphere.F MITgcm-checkpoint68i/pkg/sphere/sphere.h MITgcm-checkpoint68i/pkg/sphere/sphere_ad.flow MITgcm-checkpoint68i/pkg/sphere/sphere_ad_diff.list MITgcm-checkpoint68i/pkg/streamice/ MITgcm-checkpoint68i/pkg/streamice/STREAMICE.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_ADV.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_BDRY.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CG.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CTRL_FLUX.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_OPTIONS.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_PETSC.h MITgcm-checkpoint68i/pkg/streamice/adstreamice_cg_solve.F MITgcm-checkpoint68i/pkg/streamice/adstreamice_invert_surf_forthick.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_prime_streamice.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice_prime.F MITgcm-checkpoint68i/pkg/streamice/phi_gl_streamice.F MITgcm-checkpoint68i/pkg/streamice/slope_limiter.F MITgcm-checkpoint68i/pkg/streamice/streamice.flow MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_diff.list MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_x.F MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_y.F MITgcm-checkpoint68i/pkg/streamice/streamice_adv_front.F MITgcm-checkpoint68i/pkg/streamice/streamice_advect_2dtracer.F MITgcm-checkpoint68i/pkg/streamice/streamice_advect_thickness.F MITgcm-checkpoint68i/pkg/streamice/streamice_apply_flux_ctrl.F MITgcm-checkpoint68i/pkg/streamice/streamice_bstress_exponent.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_functions.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_matfree.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_wrapper.F MITgcm-checkpoint68i/pkg/streamice/streamice_check.F MITgcm-checkpoint68i/pkg/streamice/streamice_cost_surf_accum.F MITgcm-checkpoint68i/pkg/streamice/streamice_diagnostics_state.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_fd.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_ppm.F MITgcm-checkpoint68i/pkg/streamice/streamice_dump.F MITgcm-checkpoint68i/pkg/streamice/streamice_dump_ad.F MITgcm-checkpoint68i/pkg/streamice/streamice_fields_load.F MITgcm-checkpoint68i/pkg/streamice/streamice_finalize_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_forced_buttress.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_fp_err_oad.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_fp_err.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err_oad.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_diagnostics.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_fixed.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_phi.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_varia.F MITgcm-checkpoint68i/pkg/streamice/streamice_initialise_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_invert_surf_forthick.F MITgcm-checkpoint68i/pkg/streamice/streamice_petsc_numerate.F MITgcm-checkpoint68i/pkg/streamice/streamice_petscmatdestroy.F MITgcm-checkpoint68i/pkg/streamice/streamice_read_pickup.F MITgcm-checkpoint68i/pkg/streamice/streamice_readparms.F MITgcm-checkpoint68i/pkg/streamice/streamice_taub.F MITgcm-checkpoint68i/pkg/streamice/streamice_timestep.F MITgcm-checkpoint68i/pkg/streamice/streamice_tridiag_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_upd_ffrac_uncoupled.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phi.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phistage.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve_openad.F MITgcm-checkpoint68i/pkg/streamice/streamice_velmask_upd.F MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta.F MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta_hybrid.F MITgcm-checkpoint68i/pkg/streamice/streamice_write_pickup.F MITgcm-checkpoint68i/pkg/thsice/ MITgcm-checkpoint68i/pkg/thsice/THSICE_COST.h MITgcm-checkpoint68i/pkg/thsice/THSICE_DEBUG.h MITgcm-checkpoint68i/pkg/thsice/THSICE_OPTIONS.h MITgcm-checkpoint68i/pkg/thsice/THSICE_PARAMS.h MITgcm-checkpoint68i/pkg/thsice/THSICE_SIZE.h MITgcm-checkpoint68i/pkg/thsice/THSICE_TAVE.h MITgcm-checkpoint68i/pkg/thsice/THSICE_VARS.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad.flow MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad_diff.list MITgcm-checkpoint68i/pkg/thsice/thsice_advdiff.F MITgcm-checkpoint68i/pkg/thsice/thsice_advection.F MITgcm-checkpoint68i/pkg/thsice/thsice_albedo.F MITgcm-checkpoint68i/pkg/thsice/thsice_ave.F MITgcm-checkpoint68i/pkg/thsice/thsice_balance_frw.F MITgcm-checkpoint68i/pkg/thsice/thsice_calc_thickn.F MITgcm-checkpoint68i/pkg/thsice/thsice_check.F MITgcm-checkpoint68i/pkg/thsice/thsice_check_conserv.F MITgcm-checkpoint68i/pkg/thsice/thsice_cost_driver.F MITgcm-checkpoint68i/pkg/thsice/thsice_cost_final.F MITgcm-checkpoint68i/pkg/thsice/thsice_cost_init_varia.F MITgcm-checkpoint68i/pkg/thsice/thsice_cost_test.F MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_init.F MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_state.F MITgcm-checkpoint68i/pkg/thsice/thsice_diffusion.F MITgcm-checkpoint68i/pkg/thsice/thsice_do_advect.F MITgcm-checkpoint68i/pkg/thsice/thsice_do_exch.F MITgcm-checkpoint68i/pkg/thsice/thsice_extend.F MITgcm-checkpoint68i/pkg/thsice/thsice_get_bulkf.F MITgcm-checkpoint68i/pkg/thsice/thsice_get_exf.F MITgcm-checkpoint68i/pkg/thsice/thsice_get_ocean.F MITgcm-checkpoint68i/pkg/thsice/thsice_get_precip.F MITgcm-checkpoint68i/pkg/thsice/thsice_get_velocity.F MITgcm-checkpoint68i/pkg/thsice/thsice_impl_temp.F MITgcm-checkpoint68i/pkg/thsice/thsice_ini_vars.F MITgcm-checkpoint68i/pkg/thsice/thsice_init_fixed.F MITgcm-checkpoint68i/pkg/thsice/thsice_main.F MITgcm-checkpoint68i/pkg/thsice/thsice_map_exf.F MITgcm-checkpoint68i/pkg/thsice/thsice_mnc_init.F MITgcm-checkpoint68i/pkg/thsice/thsice_monitor.F MITgcm-checkpoint68i/pkg/thsice/thsice_output.F MITgcm-checkpoint68i/pkg/thsice/thsice_read_pickup.F MITgcm-checkpoint68i/pkg/thsice/thsice_readparms.F MITgcm-checkpoint68i/pkg/thsice/thsice_reshape_layers.F MITgcm-checkpoint68i/pkg/thsice/thsice_salt_plume.F MITgcm-checkpoint68i/pkg/thsice/thsice_slab_ocean.F MITgcm-checkpoint68i/pkg/thsice/thsice_solve4temp.F MITgcm-checkpoint68i/pkg/thsice/thsice_step_fwd.F MITgcm-checkpoint68i/pkg/thsice/thsice_step_temp.F MITgcm-checkpoint68i/pkg/thsice/thsice_test_addfluid.h MITgcm-checkpoint68i/pkg/thsice/thsice_turnoff_io.F MITgcm-checkpoint68i/pkg/thsice/thsice_write_pickup.F MITgcm-checkpoint68i/pkg/timeave/ MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_OPTIONS.h MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_STATV.h MITgcm-checkpoint68i/pkg/timeave/timeave_ad_diff.list MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1k1t.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1t.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1vfc.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2v.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2vfc.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_dif_1t.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumulate.F MITgcm-checkpoint68i/pkg/timeave/timeave_description.tex MITgcm-checkpoint68i/pkg/timeave/timeave_init_fixed.F MITgcm-checkpoint68i/pkg/timeave/timeave_norma_2v.F MITgcm-checkpoint68i/pkg/timeave/timeave_normalize.F MITgcm-checkpoint68i/pkg/timeave/timeave_reset.F MITgcm-checkpoint68i/pkg/timeave/timeave_statv_write.F MITgcm-checkpoint68i/pkg/timeave/timeave_statvars.F MITgcm-checkpoint68i/pkg/timeave/timeave_surf_flux.F MITgcm-checkpoint68i/pkg/zonal_filt/ MITgcm-checkpoint68i/pkg/zonal_filt/FFTPACK.h MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT.h MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT_OPTIONS.h MITgcm-checkpoint68i/pkg/zonal_filt/fftpack.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_ts.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_uv.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_init.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_nofill.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_postsmooth.F 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MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/ MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/.gitignore MITgcm-checkpoint68i/verification/verification_parser.py MITgcm-checkpoint68i/verification/vermix/ MITgcm-checkpoint68i/verification/vermix/build/ MITgcm-checkpoint68i/verification/vermix/build/.gitignore MITgcm-checkpoint68i/verification/vermix/code/ MITgcm-checkpoint68i/verification/vermix/code/CPP_EEOPTIONS.h MITgcm-checkpoint68i/verification/vermix/code/CPP_OPTIONS.h MITgcm-checkpoint68i/verification/vermix/code/DIAGNOSTICS_SIZE.h MITgcm-checkpoint68i/verification/vermix/code/KPP_OPTIONS.h MITgcm-checkpoint68i/verification/vermix/code/SIZE.h MITgcm-checkpoint68i/verification/vermix/code/packages.conf MITgcm-checkpoint68i/verification/vermix/input.dd/ MITgcm-checkpoint68i/verification/vermix/input.dd/data MITgcm-checkpoint68i/verification/vermix/input.dd/data.kpp MITgcm-checkpoint68i/verification/vermix/input.ggl90/ MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.ggl90 MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.pkg MITgcm-checkpoint68i/verification/vermix/input.my82/ MITgcm-checkpoint68i/verification/vermix/input.my82/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.my82/data.my82 MITgcm-checkpoint68i/verification/vermix/input.my82/data.pkg MITgcm-checkpoint68i/verification/vermix/input.opps/ MITgcm-checkpoint68i/verification/vermix/input.opps/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.opps/data.opps MITgcm-checkpoint68i/verification/vermix/input.opps/data.pkg MITgcm-checkpoint68i/verification/vermix/input.pp81/ MITgcm-checkpoint68i/verification/vermix/input.pp81/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pkg MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pp81 MITgcm-checkpoint68i/verification/vermix/input/ MITgcm-checkpoint68i/verification/vermix/input/Qnet_72.forcing MITgcm-checkpoint68i/verification/vermix/input/S.doublediff MITgcm-checkpoint68i/verification/vermix/input/S.init MITgcm-checkpoint68i/verification/vermix/input/T.doublediff MITgcm-checkpoint68i/verification/vermix/input/TKE.init MITgcm-checkpoint68i/verification/vermix/input/T_26.init MITgcm-checkpoint68i/verification/vermix/input/data MITgcm-checkpoint68i/verification/vermix/input/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input/data.kpp MITgcm-checkpoint68i/verification/vermix/input/data.mnc MITgcm-checkpoint68i/verification/vermix/input/data.pkg MITgcm-checkpoint68i/verification/vermix/input/eedata MITgcm-checkpoint68i/verification/vermix/input/gendata.m MITgcm-checkpoint68i/verification/vermix/input/taux_72.forcing MITgcm-checkpoint68i/verification/vermix/input/tr_checklist MITgcm-checkpoint68i/verification/vermix/results/ MITgcm-checkpoint68i/verification/vermix/results/output.dd.txt MITgcm-checkpoint68i/verification/vermix/results/output.ggl90.txt MITgcm-checkpoint68i/verification/vermix/results/output.my82.txt MITgcm-checkpoint68i/verification/vermix/results/output.opps.txt MITgcm-checkpoint68i/verification/vermix/results/output.pp81.txt MITgcm-checkpoint68i/verification/vermix/results/output.txt MITgcm-checkpoint68i/verification/vermix/run/ MITgcm-checkpoint68i/verification/vermix/run/.gitignore [41;37m step #5: BuildMITgcm [0m GENMAKE : A program for GENerating MAKEfiles for the MITgcm project. For a quick list of options, use "genmake2 -h" or for more detail see the documentation, section "Building the model" (under "Getting Started") at: https://mitgcm.readthedocs.io/ === Processing options files and arguments === getting local config information: none found getting OPTFILE information: Warning: no OPTFILE specified so we'll look for possible settings === Searching for possible settings for OPTFILE === The platform appears to be: linux_amd64 The possible FORTRAN compilers found in your path are: gfortran f77 f95 mpif77 Setting OPTFILE to: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran using OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran" get Compiler-version: '8' getting AD_OPTFILE information: using AD_OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/adjoint_options/adjoint_default" check Fortran Compiler... pass (set FC_CHECK=5/5) check makedepend (local: 0, system: 1, 1) Turning on MPI cpp macros === Checking system libraries === Do we have the system() command using mpif77... yes Do we have the fdate() command using mpif77... yes Do we have the etime() command using mpif77... c,r: yes (SbR) Can we call simple C routines (here, "cloc()") using mpif77... yes Can we unlimit the stack size using mpif77... yes Can we register a signal handler using mpif77... yes Can we use stat() through C calls... yes Can we create NetCDF-enabled binaries... no skip check for LAPACK Libs Can we call FLUSH intrinsic subroutine... yes === Setting defaults === Adding MODS directories: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code Making source files in eesupp from templates Making source files in pkg/exch2 from templates Making source files in pkg/regrid from templates === Determining package settings === getting package dependency info from /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_depend getting package groups info from /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_groups checking list of packages to compile: using PKG_LIST="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/packages.conf" before group expansion packages are: gfd obcs shelfice diagnostics timeave replacing "gfd" with: mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor after group expansion packages are: mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor obcs shelfice diagnostics timeave applying DISABLE settings applying ENABLE settings packages are: debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave applying package dependency rules packages are: debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave Adding STANDARDDIRS='eesupp model' Searching for *OPTIONS.h files in order to warn about the presence of "#define "-type statements that are no longer allowed: found CPP_EEOPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h" found CPP_OPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h" Creating the list of files for the adjoint compiler. === Creating the Makefile === setting INCLUDES Determining the list of source and include files Writing makefile: Makefile Add the source list for AD code generation Making list of "exceptions" that need ".p" files Making list of NOOPTFILES Add rules for links Adding makedepend marker === Done === original 'Makefile' generated successfully => next steps: > make depend > make (<-- to generate executable) make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build' if [ ! -L cpl_issm.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/cpl_issm.F cpl_issm.F; fi if [ ! -L do_oceanic_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/do_oceanic_phys.F do_oceanic_phys.F; fi if [ ! -L eeboot_minimal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eeboot_minimal.F eeboot_minimal.F; fi if [ ! -L eedie.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eedie.F eedie.F; fi if [ ! -L chksum_tiled.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/chksum_tiled.F chksum_tiled.F; fi if [ ! -L debug_call.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_call.F debug_call.F; fi if [ ! -L debug_cs_corner_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_cs_corner_uv.F debug_cs_corner_uv.F; fi if [ ! -L debug_enter.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_enter.F debug_enter.F; fi if [ ! -L debug_fld_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rl.F debug_fld_stats_rl.F; fi if [ ! -L debug_fld_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rs.F debug_fld_stats_rs.F; fi if [ ! -L debug_leave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_leave.F debug_leave.F; fi if [ ! -L debug_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_msg.F debug_msg.F; fi if [ ! -L debug_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rl.F debug_stats_rl.F; fi if [ ! -L debug_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rs.F debug_stats_rs.F; fi if [ ! -L fill_in_corners_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/fill_in_corners_rl.F fill_in_corners_rl.F; fi if [ ! -L write_fullarray_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rl.F write_fullarray_rl.F; fi if [ ! -L write_fullarray_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rs.F write_fullarray_rs.F; fi if [ ! -L diag_calc_psivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_calc_psivel.F diag_calc_psivel.F; fi if [ ! -L diag_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_cg2d.F diag_cg2d.F; fi if [ ! -L diagnostics_addtolist.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_addtolist.F diagnostics_addtolist.F; fi if [ ! -L diagnostics_calc_phivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_calc_phivel.F diagnostics_calc_phivel.F; fi if [ ! -L diagnostics_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_check.F diagnostics_check.F; fi if [ ! -L diagnostics_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_clear.F diagnostics_clear.F; fi if [ ! -L diagnostics_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill.F diagnostics_fill.F; fi if [ ! -L diagnostics_fill_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_field.F diagnostics_fill_field.F; fi if [ ! -L diagnostics_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_rs.F diagnostics_fill_rs.F; fi if [ ! -L diagnostics_fill_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_state.F diagnostics_fill_state.F; fi if [ ! -L diagnostics_fract_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fract_fill.F diagnostics_fract_fill.F; fi if [ ! -L diagnostics_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_ini_io.F diagnostics_ini_io.F; fi if [ ! -L diagnostics_init_early.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_early.F diagnostics_init_early.F; fi if [ ! -L diagnostics_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_fixed.F diagnostics_init_fixed.F; fi if [ ! -L diagnostics_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_varia.F diagnostics_init_varia.F; fi if [ ! -L diagnostics_interp_p2p.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_p2p.F diagnostics_interp_p2p.F; fi if [ ! -L diagnostics_interp_vert.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_vert.F diagnostics_interp_vert.F; fi if [ ! -L diagnostics_is_on.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_is_on.F diagnostics_is_on.F; fi if [ ! -L diagnostics_list_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_list_check.F diagnostics_list_check.F; fi if [ ! -L diagnostics_main_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_main_init.F diagnostics_main_init.F; fi if [ ! -L diagnostics_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_mnc_out.F diagnostics_mnc_out.F; fi if [ ! -L diagnostics_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_out.F diagnostics_out.F; fi if [ ! -L diagnostics_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_readparms.F diagnostics_readparms.F; fi if [ ! -L diagnostics_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_read_pickup.F diagnostics_read_pickup.F; fi if [ ! -L diagnostics_scale_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill.F diagnostics_scale_fill.F; fi if [ ! -L diagnostics_scale_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill_rs.F diagnostics_scale_fill_rs.F; fi if [ ! -L diagnostics_set_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_calc.F diagnostics_set_calc.F; fi if [ ! -L diagnostics_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_setdiag.F diagnostics_setdiag.F; fi if [ ! -L diagnostics_set_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_levels.F diagnostics_set_levels.F; fi if [ ! -L diagnostics_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_pointers.F diagnostics_set_pointers.F; fi if [ ! -L diagnostics_status_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_status_error.F diagnostics_status_error.F; fi if [ ! -L diagnostics_sum_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_sum_levels.F diagnostics_sum_levels.F; fi if [ ! -L diagnostics_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_summary.F diagnostics_summary.F; fi if [ ! -L diagnostics_switch_onoff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_switch_onoff.F diagnostics_switch_onoff.F; fi if [ ! -L diagnostics_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_utils.F diagnostics_utils.F; fi if [ ! -L diagnostics_write_adj.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_adj.F diagnostics_write_adj.F; fi if [ ! -L diagnostics_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write.F diagnostics_write.F; fi if [ ! -L diagnostics_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_pickup.F diagnostics_write_pickup.F; fi if [ ! -L diagstats_ascii_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ascii_out.F diagstats_ascii_out.F; fi if [ ! -L diagstats_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_calc.F diagstats_calc.F; fi if [ ! -L diagstats_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_clear.F diagstats_clear.F; fi if [ ! -L diagstats_close_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_close_io.F diagstats_close_io.F; fi if [ ! -L diagstats_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_fill.F diagstats_fill.F; fi if [ ! -L diagstats_global.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_global.F diagstats_global.F; fi if [ ! -L diagstats_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ini_io.F diagstats_ini_io.F; fi if [ ! -L diagstats_local.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_local.F diagstats_local.F; fi if [ ! -L diagstats_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_mnc_out.F diagstats_mnc_out.F; fi if [ ! -L diagstats_others_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_others_calc.F diagstats_others_calc.F; fi if [ ! -L diagstats_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_output.F diagstats_output.F; fi if [ ! -L diagstats_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_setdiag.F diagstats_setdiag.F; fi if [ ! -L diagstats_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_pointers.F diagstats_set_pointers.F; fi if [ ! -L diagstats_set_regions.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_regions.F diagstats_set_regions.F; fi if [ ! -L diag_vegtile_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_vegtile_fill.F diag_vegtile_fill.F; fi if [ ! -L gad_advection.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advection.F gad_advection.F; fi if [ ! -L gad_advscheme.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advscheme.F gad_advscheme.F; fi if [ ! -L gad_biharm_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_r.F gad_biharm_r.F; fi if [ ! -L gad_biharm_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_x.F gad_biharm_x.F; fi if [ ! -L gad_biharm_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_y.F gad_biharm_y.F; fi if [ ! -L gad_c2_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_r.F gad_c2_adv_r.F; fi if [ ! -L gad_c2_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_x.F gad_c2_adv_x.F; fi if [ ! -L gad_c2_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_y.F gad_c2_adv_y.F; fi if [ ! -L gad_c2_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_impl_r.F gad_c2_impl_r.F; fi if [ ! -L gad_c4_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_r.F gad_c4_adv_r.F; fi if [ ! -L gad_c4_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_x.F gad_c4_adv_x.F; fi if [ ! -L gad_c4_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_y.F gad_c4_adv_y.F; fi if [ ! -L gad_calc_rhs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_calc_rhs.F gad_calc_rhs.F; fi if [ ! -L gad_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_check.F gad_check.F; fi if [ ! -L gad_del2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_del2.F gad_del2.F; fi if [ ! -L gad_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_init.F gad_diagnostics_init.F; fi if [ ! -L gad_diagnostics_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_state.F gad_diagnostics_state.F; fi if [ ! -L gad_diff_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_r.F gad_diff_r.F; fi if [ ! -L gad_diff_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_x.F gad_diff_x.F; fi if [ ! -L gad_diff_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_y.F gad_diff_y.F; fi if [ ! -L gad_dst2u1_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_r.F gad_dst2u1_adv_r.F; fi if [ ! -L gad_dst2u1_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_x.F gad_dst2u1_adv_x.F; fi if [ ! -L gad_dst2u1_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_y.F gad_dst2u1_adv_y.F; fi if [ ! -L gad_dst2u1_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_impl_r.F gad_dst2u1_impl_r.F; fi if [ ! -L gad_dst3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_r.F gad_dst3_adv_r.F; fi if [ ! -L gad_dst3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_x.F gad_dst3_adv_x.F; fi if [ ! -L gad_dst3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_y.F gad_dst3_adv_y.F; fi if [ ! -L gad_dst3fl_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_r.F gad_dst3fl_adv_r.F; fi if [ ! -L gad_dst3fl_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_x.F gad_dst3fl_adv_x.F; fi if [ ! -L gad_dst3fl_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_y.F gad_dst3fl_adv_y.F; fi if [ ! -L gad_dst3fl_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_impl_r.F gad_dst3fl_impl_r.F; fi if [ ! -L gad_exch_som.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_exch_som.F gad_exch_som.F; fi if [ ! -L gad_fluxlimit_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_r.F gad_fluxlimit_adv_r.F; fi if [ ! -L gad_fluxlimit_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_x.F gad_fluxlimit_adv_x.F; fi if [ ! -L gad_fluxlimit_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_y.F gad_fluxlimit_adv_y.F; fi if [ ! -L gad_fluxlimit_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_impl_r.F gad_fluxlimit_impl_r.F; fi if [ ! -L gad_grad_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_x.F gad_grad_x.F; fi if [ ! -L gad_grad_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_y.F gad_grad_y.F; fi if [ ! -L gad_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_implicit_r.F gad_implicit_r.F; fi if [ ! -L gad_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_fixed.F gad_init_fixed.F; fi if [ ! -L gad_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_varia.F gad_init_varia.F; fi if [ ! -L gad_os7mp_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_r.F gad_os7mp_adv_r.F; fi if [ ! -L gad_os7mp_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_x.F gad_os7mp_adv_x.F; fi if [ ! -L gad_os7mp_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_y.F gad_os7mp_adv_y.F; fi if [ ! -L gad_osc_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_r.F gad_osc_hat_r.F; fi if [ ! -L gad_osc_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_x.F gad_osc_hat_x.F; fi if [ ! -L gad_osc_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_y.F gad_osc_hat_y.F; fi if [ ! -L gad_osc_mul_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_r.F gad_osc_mul_r.F; fi if [ ! -L gad_osc_mul_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_x.F gad_osc_mul_x.F; fi if [ ! -L gad_osc_mul_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_y.F gad_osc_mul_y.F; fi if [ ! -L gad_plm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_plm_fun.F gad_plm_fun.F; fi if [ ! -L gad_ppm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_r.F gad_ppm_adv_r.F; fi if [ ! -L gad_ppm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_x.F gad_ppm_adv_x.F; fi if [ ! -L gad_ppm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_y.F gad_ppm_adv_y.F; fi if [ ! -L gad_ppm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_r.F gad_ppm_flx_r.F; fi if [ ! -L gad_ppm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_x.F gad_ppm_flx_x.F; fi if [ ! -L gad_ppm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_y.F gad_ppm_flx_y.F; fi if [ ! -L gad_ppm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_fun.F gad_ppm_fun.F; fi if [ ! -L gad_ppm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_r.F gad_ppm_hat_r.F; fi if [ ! -L gad_ppm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_x.F gad_ppm_hat_x.F; fi if [ ! -L gad_ppm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_y.F gad_ppm_hat_y.F; fi if [ ! -L gad_ppm_p3e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_r.F gad_ppm_p3e_r.F; fi if [ ! -L gad_ppm_p3e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_x.F gad_ppm_p3e_x.F; fi if [ ! -L gad_ppm_p3e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_y.F gad_ppm_p3e_y.F; fi if [ ! -L gad_pqm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_r.F gad_pqm_adv_r.F; fi if [ ! -L gad_pqm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_x.F gad_pqm_adv_x.F; fi if [ ! -L gad_pqm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_y.F gad_pqm_adv_y.F; fi if [ ! -L gad_pqm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_r.F gad_pqm_flx_r.F; fi if [ ! -L gad_pqm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_x.F gad_pqm_flx_x.F; fi if [ ! -L gad_pqm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_y.F gad_pqm_flx_y.F; fi if [ ! -L gad_pqm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_fun.F gad_pqm_fun.F; fi if [ ! -L gad_pqm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_r.F gad_pqm_hat_r.F; fi if [ ! -L gad_pqm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_x.F gad_pqm_hat_x.F; fi if [ ! -L gad_pqm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_y.F gad_pqm_hat_y.F; fi if [ ! -L gad_pqm_p5e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_r.F gad_pqm_p5e_r.F; fi if [ ! -L gad_pqm_p5e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_x.F gad_pqm_p5e_x.F; fi if [ ! -L gad_pqm_p5e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_y.F gad_pqm_p5e_y.F; fi if [ ! -L gad_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_read_pickup.F gad_read_pickup.F; fi if [ ! -L gad_som_advect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_advect.F gad_som_advect.F; fi if [ ! -L gad_som_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_r.F gad_som_adv_r.F; fi if [ ! -L gad_som_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_x.F gad_som_adv_x.F; fi if [ ! -L gad_som_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_y.F gad_som_adv_y.F; fi if [ ! -L gad_som_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_exchanges.F gad_som_exchanges.F; fi if [ ! -L gad_som_fill_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_fill_cs_corner.F gad_som_fill_cs_corner.F; fi if [ ! -L gad_som_lim_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_lim_r.F gad_som_lim_r.F; fi if [ ! -L gad_som_prep_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_prep_cs_corner.F gad_som_prep_cs_corner.F; fi if [ ! -L gad_u3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_r.F gad_u3_adv_r.F; fi if [ ! -L gad_u3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_x.F gad_u3_adv_x.F; fi if [ ! -L gad_u3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_y.F gad_u3_adv_y.F; fi if [ ! -L gad_u3c4_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3c4_impl_r.F gad_u3c4_impl_r.F; fi if [ ! -L gad_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_write_pickup.F gad_write_pickup.F; fi if [ ! -L salt_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/salt_fill.F salt_fill.F; fi if [ ! -L mdsio_buffertorl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertorl.F mdsio_buffertorl.F; fi if [ ! -L mdsio_buffertors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertors.F mdsio_buffertors.F; fi if [ ! -L mdsio_check4file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_check4file.F mdsio_check4file.F; fi if [ ! -L mdsio_facef_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_facef_read.F mdsio_facef_read.F; fi if [ ! -L mdsio_gl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl.F mdsio_gl.F; fi if [ ! -L mdsio_gl_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl_slice.F mdsio_gl_slice.F; fi if [ ! -L mdsio_pass_r4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4torl.F mdsio_pass_r4torl.F; fi if [ ! -L mdsio_pass_r4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4tors.F mdsio_pass_r4tors.F; fi if [ ! -L mdsio_pass_r8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8torl.F mdsio_pass_r8torl.F; fi if [ ! -L mdsio_pass_r8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8tors.F mdsio_pass_r8tors.F; fi if [ ! -L mdsio_rd_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rl.F mdsio_rd_rec_rl.F; fi if [ ! -L mdsio_rd_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rs.F mdsio_rd_rec_rs.F; fi if [ ! -L mdsio_read_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_field.F mdsio_read_field.F; fi if [ ! -L mdsio_read_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_meta.F mdsio_read_meta.F; fi if [ ! -L mdsio_read_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_section.F mdsio_read_section.F; fi if [ ! -L mdsio_read_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_tape.F mdsio_read_tape.F; fi if [ ! -L mdsio_readvec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_readvec_loc.F mdsio_readvec_loc.F; fi if [ ! -L mdsio_read_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_whalos.F mdsio_read_whalos.F; fi if [ ! -L mdsio_rw_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_field.F mdsio_rw_field.F; fi if [ ! -L mdsio_rw_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_slice.F mdsio_rw_slice.F; fi if [ ! -L mdsio_seg4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4torl.F mdsio_seg4torl.F; fi if [ ! -L mdsio_seg4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4tors.F mdsio_seg4tors.F; fi if [ ! -L mdsio_seg8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8torl.F mdsio_seg8torl.F; fi if [ ! -L mdsio_seg8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8tors.F mdsio_seg8tors.F; fi if [ ! -L mdsio_segxtorx_2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_segxtorx_2d.F mdsio_segxtorx_2d.F; fi if [ ! -L mdsio_write_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_field.F mdsio_write_field.F; fi if [ ! -L mdsio_writelocal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writelocal.F mdsio_writelocal.F; fi if [ ! -L mdsio_write_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_meta.F mdsio_write_meta.F; fi if [ ! -L mdsio_write_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_section.F mdsio_write_section.F; fi if [ ! -L mdsio_write_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_tape.F mdsio_write_tape.F; fi if [ ! -L mdsio_writevec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writevec_loc.F mdsio_writevec_loc.F; fi if [ ! -L mdsio_write_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_whalos.F mdsio_write_whalos.F; fi if [ ! -L mdsio_wr_metafiles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_metafiles.F mdsio_wr_metafiles.F; fi if [ ! -L mdsio_wr_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rl.F mdsio_wr_rec_rl.F; fi if [ ! -L mdsio_wr_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rs.F mdsio_wr_rec_rs.F; fi if [ ! -L mom_calc_3d_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_3d_strain.F mom_calc_3d_strain.F; fi if [ ! -L mom_calc_absvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_absvort3.F mom_calc_absvort3.F; fi if [ ! -L mom_calc_hdiv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hdiv.F mom_calc_hdiv.F; fi if [ ! -L mom_calc_hfacz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hfacz.F mom_calc_hfacz.F; fi if [ ! -L mom_calc_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_ke.F mom_calc_ke.F; fi if [ ! -L mom_calc_relvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_relvort3.F mom_calc_relvort3.F; fi if [ ! -L mom_calc_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_smag_3d.F mom_calc_smag_3d.F; fi if [ ! -L mom_calc_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_strain.F mom_calc_strain.F; fi if [ ! -L mom_calc_tension.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_tension.F mom_calc_tension.F; fi if [ ! -L mom_calc_visc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_visc.F mom_calc_visc.F; fi if [ ! -L mom_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_diagnostics_init.F mom_diagnostics_init.F; fi if [ ! -L mom_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_hdissip.F mom_hdissip.F; fi if [ ! -L mom_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_init_fixed.F mom_init_fixed.F; fi if [ ! -L mom_quasihydrostatic.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_quasihydrostatic.F mom_quasihydrostatic.F; fi if [ ! -L mom_u_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_botdrag_coeff.F mom_u_botdrag_coeff.F; fi if [ ! -L mom_u_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_coriolis_nh.F mom_u_coriolis_nh.F; fi if [ ! -L mom_u_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_implicit_r.F mom_u_implicit_r.F; fi if [ ! -L mom_u_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_metric_nh.F mom_u_metric_nh.F; fi if [ ! -L mom_u_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_rviscflux.F mom_u_rviscflux.F; fi if [ ! -L mom_u_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_sidedrag.F mom_u_sidedrag.F; fi if [ ! -L mom_uv_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_uv_smag_3d.F mom_uv_smag_3d.F; fi if [ ! -L mom_v_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_botdrag_coeff.F mom_v_botdrag_coeff.F; fi if [ ! -L mom_v_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_coriolis_nh.F mom_v_coriolis_nh.F; fi if [ ! -L mom_v_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_implicit_r.F mom_v_implicit_r.F; fi if [ ! -L mom_visc_qgl_limit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_limit.F mom_visc_qgl_limit.F; fi if [ ! -L mom_visc_qgl_stretch.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_stretch.F mom_visc_qgl_stretch.F; fi if [ ! -L mom_v_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_metric_nh.F mom_v_metric_nh.F; fi if [ ! -L mom_v_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_rviscflux.F mom_v_rviscflux.F; fi if [ ! -L mom_v_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_sidedrag.F mom_v_sidedrag.F; fi if [ ! -L mom_w_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_coriolis_nh.F mom_w_coriolis_nh.F; fi if [ ! -L mom_w_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_metric_nh.F mom_w_metric_nh.F; fi if [ ! -L mom_w_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_sidedrag.F mom_w_sidedrag.F; fi if [ ! -L mom_w_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_smag_3d.F mom_w_smag_3d.F; fi if [ ! -L mom_calc_rtrans.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_calc_rtrans.F mom_calc_rtrans.F; fi if [ ! -L mom_fluxform.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_fluxform.F mom_fluxform.F; fi if [ ! -L mom_u_adv_uu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_uu.F mom_u_adv_uu.F; fi if [ ! -L mom_u_adv_vu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_vu.F mom_u_adv_vu.F; fi if [ ! -L mom_u_adv_wu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_wu.F mom_u_adv_wu.F; fi if [ ! -L mom_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_coriolis.F mom_u_coriolis.F; fi if [ ! -L mom_u_del2u.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_del2u.F mom_u_del2u.F; fi if [ ! -L mom_u_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_cylinder.F mom_u_metric_cylinder.F; fi if [ ! -L mom_u_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_sphere.F mom_u_metric_sphere.F; fi if [ ! -L mom_uv_boundary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_uv_boundary.F mom_uv_boundary.F; fi if [ ! -L mom_u_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_xviscflux.F mom_u_xviscflux.F; fi if [ ! -L mom_u_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_yviscflux.F mom_u_yviscflux.F; fi if [ ! -L mom_v_adv_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_uv.F mom_v_adv_uv.F; fi if [ ! -L mom_v_adv_vv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_vv.F mom_v_adv_vv.F; fi if [ ! -L mom_v_adv_wv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_wv.F mom_v_adv_wv.F; fi if [ ! -L mom_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_coriolis.F mom_v_coriolis.F; fi if [ ! -L mom_v_del2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_del2v.F mom_v_del2v.F; fi if [ ! -L mom_v_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_cylinder.F mom_v_metric_cylinder.F; fi if [ ! -L mom_v_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_sphere.F mom_v_metric_sphere.F; fi if [ ! -L mom_v_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_xviscflux.F mom_v_xviscflux.F; fi if [ ! -L mom_v_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_yviscflux.F mom_v_yviscflux.F; fi if [ ! -L mom_vecinv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vecinv.F mom_vecinv.F; fi if [ ! -L mom_vi_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_coriolis.F mom_vi_coriolis.F; fi if [ ! -L mom_vi_del2uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_del2uv.F mom_vi_del2uv.F; fi if [ ! -L mom_vi_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_hdissip.F mom_vi_hdissip.F; fi if [ ! -L mom_vi_u_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F mom_vi_u_coriolis_c4.F; fi if [ ! -L mom_vi_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis.F mom_vi_u_coriolis.F; fi if [ ! -L mom_vi_u_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_grad_ke.F mom_vi_u_grad_ke.F; fi if [ ! -L mom_vi_u_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_vertshear.F mom_vi_u_vertshear.F; fi if [ ! -L mom_vi_v_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F mom_vi_v_coriolis_c4.F; fi if [ ! -L mom_vi_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis.F mom_vi_v_coriolis.F; fi if [ ! -L mom_vi_v_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_grad_ke.F mom_vi_v_grad_ke.F; fi if [ ! -L mom_vi_v_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_vertshear.F mom_vi_v_vertshear.F; fi if [ ! -L mon_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcfl.F mon_advcfl.F; fi if [ ! -L mon_advcflw2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw2.F mon_advcflw2.F; fi if [ ! -L mon_advcflw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw.F mon_advcflw.F; fi if [ ! -L mon_calc_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_advcfl.F mon_calc_advcfl.F; fi if [ ! -L mon_calc_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rl.F mon_calc_stats_rl.F; fi if [ ! -L mon_calc_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rs.F mon_calc_stats_rs.F; fi if [ ! -L mon_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_init.F mon_init.F; fi if [ ! -L monitor_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_ad.F monitor_ad.F; fi if [ ! -L monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor.F monitor.F; fi if [ ! -L monitor_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_g.F monitor_g.F; fi if [ ! -L mon_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_ke.F mon_ke.F; fi if [ ! -L mon_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_out.F mon_out.F; fi if [ ! -L mon_printstats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rl.F mon_printstats_rl.F; fi if [ ! -L mon_printstats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rs.F mon_printstats_rs.F; fi if [ ! -L mon_set_iounit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_iounit.F mon_set_iounit.F; fi if [ ! -L mon_set_pref.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_pref.F mon_set_pref.F; fi if [ ! -L mon_solution.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_solution.F mon_solution.F; fi if [ ! -L mon_stats_latbnd_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_latbnd_rl.F mon_stats_latbnd_rl.F; fi if [ ! -L mon_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rl.F mon_stats_rl.F; fi if [ ! -L mon_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rs.F mon_stats_rs.F; fi if [ ! -L mon_surfcor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_surfcor.F mon_surfcor.F; fi if [ ! -L mon_vort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_vort3.F mon_vort3.F; fi if [ ! -L mon_writestats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rl.F mon_writestats_rl.F; fi if [ ! -L mon_writestats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rs.F mon_writestats_rs.F; fi if [ ! -L obcs_add_tides.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_add_tides.F obcs_add_tides.F; fi if [ ! -L obcs_adjust.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust.F obcs_adjust.F; fi if [ ! -L obcs_adjust_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust_uvice.F obcs_adjust_uvice.F; fi if [ ! -L obcs_apply_eta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_eta.F obcs_apply_eta.F; fi if [ ! -L obcs_apply_ptracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ptracer.F obcs_apply_ptracer.F; fi if [ ! -L obcs_apply_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_r_star.F obcs_apply_r_star.F; fi if [ ! -L obcs_apply_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_seaice.F obcs_apply_seaice.F; fi if [ ! -L obcs_apply_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_surf_dr.F obcs_apply_surf_dr.F; fi if [ ! -L obcs_apply_ts.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ts.F obcs_apply_ts.F; fi if [ ! -L obcs_apply_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uv.F obcs_apply_uv.F; fi if [ ! -L obcs_apply_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uvice.F obcs_apply_uvice.F; fi if [ ! -L obcs_apply_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_w.F obcs_apply_w.F; fi if [ ! -L obcs_balance_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_balance_flow.F obcs_balance_flow.F; fi if [ ! -L obcs_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc.F obcs_calc.F; fi if [ ! -L obcs_calc_stevens.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc_stevens.F obcs_calc_stevens.F; fi if [ ! -L obcs_check_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check_depths.F obcs_check_depths.F; fi if [ ! -L obcs_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check.F obcs_check.F; fi if [ ! -L obcs_copy_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_tracer.F obcs_copy_tracer.F; fi if [ ! -L obcs_copy_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_uv_n.F obcs_copy_uv_n.F; fi if [ ! -L obcs_diag_balance.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_diag_balance.F obcs_diag_balance.F; fi if [ ! -L obcs_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exchanges.F obcs_exchanges.F; fi if [ ! -L obcs_exf_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exf_load.F obcs_exf_load.F; fi if [ ! -L obcs_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_fields_load.F obcs_fields_load.F; fi if [ ! -L obcs_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_fixed.F obcs_init_fixed.F; fi if [ ! -L obcs_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_variables.F obcs_init_variables.F; fi if [ ! -L obcs_monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_monitor.F obcs_monitor.F; fi if [ ! -L obcs_mon_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_mon_stats.F obcs_mon_stats.F; fi if [ ! -L obcs_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_output.F obcs_output.F; fi if [ ! -L obcs_prescribe_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_prescribe_read.F obcs_prescribe_read.F; fi if [ ! -L obcs_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_readparms.F obcs_readparms.F; fi if [ ! -L obcs_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_read_pickup.F obcs_read_pickup.F; fi if [ ! -L obcs_save_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_save_uv_n.F obcs_save_uv_n.F; fi if [ ! -L obcs_seaice_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_seaice_sponge.F obcs_seaice_sponge.F; fi if [ ! -L obcs_set_connect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_set_connect.F obcs_set_connect.F; fi if [ ! -L obcs_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_sponge.F obcs_sponge.F; fi if [ ! -L obcs_u1_adv_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_u1_adv_tracer.F obcs_u1_adv_tracer.F; fi if [ ! -L obcs_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_write_pickup.F obcs_write_pickup.F; fi if [ ! -L orlanski_east.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_east.F orlanski_east.F; fi if [ ! -L orlanski_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_init.F orlanski_init.F; fi if [ ! -L orlanski_north.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_north.F orlanski_north.F; fi if [ ! -L orlanski_south.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_south.F orlanski_south.F; fi if [ ! -L orlanski_west.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_west.F orlanski_west.F; fi if [ ! -L get_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/get_write_global_fld.F get_write_global_fld.F; fi if [ ! -L read_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rl.F read_fld_xy_rl.F; fi if [ ! -L read_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rs.F read_fld_xy_rs.F; fi if [ ! -L read_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rl.F read_fld_xyz_rl.F; fi if [ ! -L read_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rs.F read_fld_xyz_rs.F; fi if [ ! -L read_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rl.F read_glvec_rl.F; fi if [ ! -L read_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rs.F read_glvec_rs.F; fi if [ ! -L read_mflds.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_mflds.F read_mflds.F; fi if [ ! -L read_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_rec.F read_rec.F; fi if [ ! -L rw_get_suffix.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/rw_get_suffix.F rw_get_suffix.F; fi if [ ! -L set_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/set_write_global_fld.F set_write_global_fld.F; fi if [ ! -L write_fld_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rl.F write_fld_3d_rl.F; fi if [ ! -L write_fld_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rs.F write_fld_3d_rs.F; fi if [ ! -L write_fld_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rl.F write_fld_s3d_rl.F; fi if [ ! -L write_fld_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rs.F write_fld_s3d_rs.F; fi if [ ! -L write_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rl.F write_fld_xy_rl.F; fi if [ ! -L write_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rs.F write_fld_xy_rs.F; fi if [ ! -L write_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rl.F write_fld_xyz_rl.F; fi if [ ! -L write_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rs.F write_fld_xyz_rs.F; fi if [ ! -L write_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rl.F write_glvec_rl.F; fi if [ ! -L write_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rs.F write_glvec_rs.F; fi if [ ! -L write_local_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rl.F write_local_rl.F; fi if [ ! -L write_local_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rs.F write_local_rs.F; fi if [ ! -L write_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_rec.F write_rec.F; fi if [ ! -L shelfice_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_check.F shelfice_check.F; fi if [ ! -L shelfice_cost_accumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_accumulate.F shelfice_cost_accumulate.F; fi if [ ! -L shelfice_cost_final.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_final.F shelfice_cost_final.F; fi if [ ! -L shelfice_cost_shifwflx.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_shifwflx.F shelfice_cost_shifwflx.F; fi if [ ! -L shelfice_diagnostics_drag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_diagnostics_drag.F shelfice_diagnostics_drag.F; fi if [ ! -L shelfice_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing.F shelfice_forcing.F; fi if [ ! -L shelfice_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing_surf.F shelfice_forcing_surf.F; fi if [ ! -L shelfice_init_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_depths.F shelfice_init_depths.F; fi if [ ! -L shelfice_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_fixed.F shelfice_init_fixed.F; fi if [ ! -L shelfice_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_varia.F shelfice_init_varia.F; fi if [ ! -L shelfice_mask_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mask_seaice.F shelfice_mask_seaice.F; fi if [ ! -L shelfice_mnc_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mnc_init.F shelfice_mnc_init.F; fi if [ ! -L shelfice_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_output.F shelfice_output.F; fi if [ ! -L shelfice_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_readparms.F shelfice_readparms.F; fi if [ ! -L shelfice_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_read_pickup.F shelfice_read_pickup.F; fi if [ ! -L shelfice_remesh_calc_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_calc_w.F shelfice_remesh_calc_w.F; fi if [ ! -L shelfice_remesh_c_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_c_mask.F shelfice_remesh_c_mask.F; fi if [ ! -L shelfice_remeshing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remeshing.F shelfice_remeshing.F; fi if [ ! -L shelfice_remesh_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_state.F shelfice_remesh_state.F; fi if [ ! -L shelfice_remesh_uv_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_uv_mask.F shelfice_remesh_uv_mask.F; fi if [ ! -L shelfice_step_icemass.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_step_icemass.F shelfice_step_icemass.F; fi if [ ! -L shelfice_thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_thermodynamics.F shelfice_thermodynamics.F; fi if [ ! -L shelfice_u_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_u_drag_coeff.F shelfice_u_drag_coeff.F; fi if [ ! -L shelfice_v_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_v_drag_coeff.F shelfice_v_drag_coeff.F; fi if [ ! -L shelfice_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_write_pickup.F shelfice_write_pickup.F; fi if [ ! -L timeave_cumul_1k1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1k1t.F timeave_cumul_1k1t.F; fi if [ ! -L timeave_cumul_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1t.F timeave_cumul_1t.F; fi if [ ! -L timeave_cumul_1vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1vfc.F timeave_cumul_1vfc.F; fi if [ ! -L timeave_cumul_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2v.F timeave_cumul_2v.F; fi if [ ! -L timeave_cumul_2vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2vfc.F timeave_cumul_2vfc.F; fi if [ ! -L timeave_cumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumulate.F timeave_cumulate.F; fi if [ ! -L timeave_cumul_dif_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_dif_1t.F timeave_cumul_dif_1t.F; fi if [ ! -L timeave_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_init_fixed.F timeave_init_fixed.F; fi if [ ! -L timeave_norma_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_norma_2v.F timeave_norma_2v.F; fi if [ ! -L timeave_normalize.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_normalize.F timeave_normalize.F; fi if [ ! -L timeave_reset.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_reset.F timeave_reset.F; fi if [ ! -L timeave_statvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statvars.F timeave_statvars.F; fi if [ ! -L timeave_statv_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statv_write.F timeave_statv_write.F; fi if [ ! -L timeave_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_surf_flux.F timeave_surf_flux.F; fi if [ ! -L all_proc_die.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/all_proc_die.F all_proc_die.F; fi if [ ! -L bar2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar2.F bar2.F; fi if [ ! -L bar_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar_check.F bar_check.F; fi if [ ! -L barrier.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/barrier.F barrier.F; fi if [ ! -L check_threads.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/check_threads.F check_threads.F; fi if [ ! -L comm_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/comm_stats.F comm_stats.F; fi if [ ! -L cumulsum_z_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/cumulsum_z_tile.F cumulsum_z_tile.F; fi if [ ! -L different_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/different_multiple.F different_multiple.F; fi if [ ! -L diff_phase_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/diff_phase_multiple.F diff_phase_multiple.F; fi if [ ! -L eeboot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeboot.F eeboot.F; fi if [ ! -L eedata_example.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eedata_example.F eedata_example.F; fi if [ ! -L eeintro_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeintro_msg.F eeintro_msg.F; fi if [ ! -L eeset_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeset_parms.F eeset_parms.F; fi if [ ! -L eewrite_eeenv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eewrite_eeenv.F eewrite_eeenv.F; fi if [ ! -L exch0_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r4.F exch0_r4.F; fi if [ ! -L exch0_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r8.F exch0_r8.F; fi if [ ! -L exch0_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rl.F exch0_rl.F; fi if [ ! -L exch0_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rs.F exch0_rs.F; fi if [ ! -L exch1_bg_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r4_cube.F exch1_bg_r4_cube.F; fi if [ ! -L exch1_bg_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r8_cube.F exch1_bg_r8_cube.F; fi if [ ! -L exch1_bg_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rl_cube.F exch1_bg_rl_cube.F; fi if [ ! -L exch1_bg_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rs_cube.F exch1_bg_rs_cube.F; fi if [ ! -L exch1_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4_cube.F exch1_r4_cube.F; fi if [ ! -L exch1_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4.F exch1_r4.F; fi if [ ! -L exch1_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8_cube.F exch1_r8_cube.F; fi if [ ! -L exch1_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8.F exch1_r8.F; fi if [ ! -L exch1_rl_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_ad.F exch1_rl_ad.F; fi if [ ! -L exch1_rl_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube_ad.F exch1_rl_cube_ad.F; fi if [ ! -L exch1_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube.F exch1_rl_cube.F; fi if [ ! -L exch1_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl.F exch1_rl.F; fi if [ ! -L exch1_rs_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_ad.F exch1_rs_ad.F; fi if [ ! -L exch1_rs_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube_ad.F exch1_rs_cube_ad.F; fi if [ ! -L exch1_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube.F exch1_rs_cube.F; fi if [ ! -L exch1_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs.F exch1_rs.F; fi if [ ! -L exch1_uv_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r4_cube.F exch1_uv_r4_cube.F; fi if [ ! -L exch1_uv_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r8_cube.F exch1_uv_r8_cube.F; fi if [ ! -L exch1_uv_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rl_cube.F exch1_uv_rl_cube.F; fi if [ ! -L exch1_uv_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rs_cube.F exch1_uv_rs_cube.F; fi if [ ! -L exch1_z_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r4_cube.F exch1_z_r4_cube.F; fi if [ ! -L exch1_z_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r8_cube.F exch1_z_r8_cube.F; fi if [ ! -L exch1_z_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rl_cube.F exch1_z_rl_cube.F; fi if [ ! -L exch1_z_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rs_cube.F exch1_z_rs_cube.F; fi if [ ! -L exch_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r4.F exch_3d_r4.F; fi if [ ! -L exch_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r8.F exch_3d_r8.F; fi if [ ! -L exch_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rl.F exch_3d_rl.F; fi if [ ! -L exch_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rs.F exch_3d_rs.F; fi if [ ! -L exch_cycle_ebl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_cycle_ebl.F exch_cycle_ebl.F; fi if [ ! -L exch_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_init.F exch_init.F; fi if [ ! -L exch_r4_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_x.F exch_r4_recv_get_x.F; fi if [ ! -L exch_r4_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_y.F exch_r4_recv_get_y.F; fi if [ ! -L exch_r4_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_x.F exch_r4_send_put_x.F; fi if [ ! -L exch_r4_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_y.F exch_r4_send_put_y.F; fi if [ ! -L exch_r8_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_x.F exch_r8_recv_get_x.F; fi if [ ! -L exch_r8_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_y.F exch_r8_recv_get_y.F; fi if [ ! -L exch_r8_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_x.F exch_r8_send_put_x.F; fi if [ ! -L exch_r8_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_y.F exch_r8_send_put_y.F; fi if [ ! -L exch_rl_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_x.F exch_rl_recv_get_x.F; fi if [ ! -L exch_rl_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_y.F exch_rl_recv_get_y.F; fi if [ ! -L exch_rl_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_x.F exch_rl_send_put_x.F; fi if [ ! -L exch_rl_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_y.F exch_rl_send_put_y.F; fi if [ ! -L exch_rs_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_x.F exch_rs_recv_get_x.F; fi if [ ! -L exch_rs_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_y.F exch_rs_recv_get_y.F; fi if [ ! -L exch_rs_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_x.F exch_rs_send_put_x.F; fi if [ ! -L exch_rs_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_y.F exch_rs_send_put_y.F; fi if [ ! -L exch_s3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r4.F exch_s3d_r4.F; fi if [ ! -L exch_s3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r8.F exch_s3d_r8.F; fi if [ ! -L exch_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rl.F exch_s3d_rl.F; fi if [ ! -L exch_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rs.F exch_s3d_rs.F; fi if [ ! -L exch_sm_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r4.F exch_sm_3d_r4.F; fi if [ ! -L exch_sm_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r8.F exch_sm_3d_r8.F; fi if [ ! -L exch_sm_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rl.F exch_sm_3d_rl.F; fi if [ ! -L exch_sm_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rs.F exch_sm_3d_rs.F; fi if [ ! -L exch_uv_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r4.F exch_uv_3d_r4.F; fi if [ ! -L exch_uv_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r8.F exch_uv_3d_r8.F; fi if [ ! -L exch_uv_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rl.F exch_uv_3d_rl.F; fi if [ ! -L exch_uv_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rs.F exch_uv_3d_rs.F; fi if [ ! -L exch_uv_agrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r4.F; fi if [ ! -L exch_uv_agrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_r8.F; fi if [ ! -L exch_uv_agrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rl.F; fi if [ ! -L exch_uv_agrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rs.F exch_uv_agrid_3d_rs.F; fi if [ ! -L exch_uv_bgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r4.F; fi if [ ! -L exch_uv_bgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_r8.F; fi if [ ! -L exch_uv_bgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rl.F; fi if [ ! -L exch_uv_bgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rs.F exch_uv_bgrid_3d_rs.F; fi if [ ! -L exch_uv_dgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r4.F; fi if [ ! -L exch_uv_dgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_r8.F; fi if [ ! -L exch_uv_dgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rl.F; fi if [ ! -L exch_uv_dgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rs.F exch_uv_dgrid_3d_rs.F; fi if [ ! -L exch_uv_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r4.F exch_uv_xy_r4.F; fi if [ ! -L exch_uv_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r8.F exch_uv_xy_r8.F; fi if [ ! -L exch_uv_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rl.F exch_uv_xy_rl.F; fi if [ ! -L exch_uv_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rs.F exch_uv_xy_rs.F; fi if [ ! -L exch_uv_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r4.F exch_uv_xyz_r4.F; fi if [ ! -L exch_uv_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r8.F exch_uv_xyz_r8.F; fi if [ ! -L exch_uv_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rl.F exch_uv_xyz_rl.F; fi if [ ! -L exch_uv_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rs.F exch_uv_xyz_rs.F; fi if [ ! -L exch_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r4.F exch_xy_r4.F; fi if [ ! -L exch_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r8.F exch_xy_r8.F; fi if [ ! -L exch_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rl.F exch_xy_rl.F; fi if [ ! -L exch_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rs.F exch_xy_rs.F; fi if [ ! -L exch_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r4.F exch_xyz_r4.F; fi if [ ! -L exch_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r8.F exch_xyz_r8.F; fi if [ ! -L exch_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rl.F exch_xyz_rl.F; fi if [ ! -L exch_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rs.F exch_xyz_rs.F; fi if [ ! -L exch_z_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r4.F exch_z_3d_r4.F; fi if [ ! -L exch_z_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r8.F exch_z_3d_r8.F; fi if [ ! -L exch_z_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rl.F exch_z_3d_rl.F; fi if [ ! -L exch_z_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rs.F exch_z_3d_rs.F; fi if [ ! -L fill_cs_corner_ag_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_ag_rl.F fill_cs_corner_ag_rl.F; fi if [ ! -L fill_cs_corner_tr_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_tr_rl.F fill_cs_corner_tr_rl.F; fi if [ ! -L fill_cs_corner_uv_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rl.F fill_cs_corner_uv_rl.F; fi if [ ! -L fill_cs_corner_uv_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rs.F fill_cs_corner_uv_rs.F; fi if [ ! -L fool_the_compiler.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fool_the_compiler.F fool_the_compiler.F; fi if [ ! -L gather_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r4.F gather_2d_r4.F; fi if [ ! -L gather_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r8.F gather_2d_r8.F; fi if [ ! -L gather_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r4.F gather_2d_wh_r4.F; fi if [ ! -L gather_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r8.F gather_2d_wh_r8.F; fi if [ ! -L gather_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r4.F gather_vec_r4.F; fi if [ ! -L gather_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r8.F gather_vec_r8.F; fi if [ ! -L gather_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_xz.F gather_xz.F; fi if [ ! -L gather_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_yz.F gather_yz.F; fi if [ ! -L get_periodic_interval.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/get_periodic_interval.F get_periodic_interval.F; fi if [ ! -L global_max.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_max.F global_max.F; fi if [ ! -L global_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum.F global_sum.F; fi if [ ! -L global_sum_singlecpu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_singlecpu.F global_sum_singlecpu.F; fi if [ ! -L global_sum_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_tile.F global_sum_tile.F; fi if [ ! -L global_vec_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_vec_sum.F global_vec_sum.F; fi if [ ! -L gsum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsum.F gsum.F; fi if [ ! -L ini_communication_patterns.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_communication_patterns.F ini_communication_patterns.F; fi if [ ! -L ini_procs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_procs.F ini_procs.F; fi if [ ! -L ini_threading_environment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_threading_environment.F ini_threading_environment.F; fi if [ ! -L lef_zero.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/lef_zero.F lef_zero.F; fi if [ ! -L main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/main.F main.F; fi if [ ! -L master_cpu_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_io.F master_cpu_io.F; fi if [ ! -L master_cpu_thread.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_thread.F master_cpu_thread.F; fi if [ ! -L mds_byteswapi4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapi4.F mds_byteswapi4.F; fi if [ ! -L mds_byteswapr4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr4.F mds_byteswapr4.F; fi if [ ! -L mds_byteswapr8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr8.F mds_byteswapr8.F; fi if [ ! -L mdsfindunit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mdsfindunit.F mdsfindunit.F; fi if [ ! -L mds_flush.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_flush.F mds_flush.F; fi if [ ! -L mds_reclen.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_reclen.F mds_reclen.F; fi if [ ! -L memsync.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/memsync.F memsync.F; fi if [ ! -L nml_change_syntax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_change_syntax.F nml_change_syntax.F; fi if [ ! -L nml_set_terminator.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_set_terminator.F nml_set_terminator.F; fi if [ ! -L open_copy_data_file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/open_copy_data_file.F open_copy_data_file.F; fi if [ ! -L print.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/print.F print.F; fi if [ ! -L reset_halo.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/reset_halo.F reset_halo.F; fi if [ ! -L scatter_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r4.F scatter_2d_r4.F; fi if [ ! -L scatter_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r8.F scatter_2d_r8.F; fi if [ ! -L scatter_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r4.F scatter_2d_wh_r4.F; fi if [ ! -L scatter_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r8.F scatter_2d_wh_r8.F; fi if [ ! -L scatter_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r4.F scatter_vec_r4.F; fi if [ ! -L scatter_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r8.F scatter_vec_r8.F; fi if [ ! -L scatter_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_xz.F scatter_xz.F; fi if [ ! -L scatter_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_yz.F scatter_yz.F; fi if [ ! -L stop_if_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/stop_if_error.F stop_if_error.F; fi if [ ! -L timers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timers.F timers.F; fi if [ ! -L utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/utils.F utils.F; fi if [ ! -L write_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/write_utils.F write_utils.F; fi if [ ! -L adams_bashforth2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth2.F adams_bashforth2.F; fi if [ ! -L adams_bashforth3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth3.F adams_bashforth3.F; fi if [ ! -L add_walls2masks.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/add_walls2masks.F add_walls2masks.F; fi if [ ! -L apply_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/apply_forcing.F apply_forcing.F; fi if [ ! -L calc_3d_diffusivity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_3d_diffusivity.F calc_3d_diffusivity.F; fi if [ ! -L calc_adv_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_adv_flow.F calc_adv_flow.F; fi if [ ! -L calc_div_ghat.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_div_ghat.F calc_div_ghat.F; fi if [ ! -L calc_eddy_stress.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_eddy_stress.F calc_eddy_stress.F; fi if [ ! -L calc_grad_phi_fv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_fv.F calc_grad_phi_fv.F; fi if [ ! -L calc_grad_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_hyd.F calc_grad_phi_hyd.F; fi if [ ! -L calc_grad_phi_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_surf.F calc_grad_phi_surf.F; fi if [ ! -L calc_grid_angles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grid_angles.F calc_grid_angles.F; fi if [ ! -L calc_gw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_gw.F calc_gw.F; fi if [ ! -L calc_ivdc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_ivdc.F calc_ivdc.F; fi if [ ! -L calc_oce_mxlayer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_oce_mxlayer.F calc_oce_mxlayer.F; fi if [ ! -L calc_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_phi_hyd.F calc_phi_hyd.F; fi if [ ! -L calc_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_r_star.F calc_r_star.F; fi if [ ! -L calc_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_surf_dr.F calc_surf_dr.F; fi if [ ! -L calc_viscosity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_viscosity.F calc_viscosity.F; fi if [ ! -L calc_wsurf_tr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_wsurf_tr.F calc_wsurf_tr.F; fi if [ ! -L cg2d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_ex0.F cg2d_ex0.F; fi if [ ! -L cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d.F cg2d.F; fi if [ ! -L cg2d_nsa.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_nsa.F cg2d_nsa.F; fi if [ ! -L cg2d_sr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_sr.F cg2d_sr.F; fi if [ ! -L cg3d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d_ex0.F cg3d_ex0.F; fi if [ ! -L cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d.F cg3d.F; fi if [ ! -L check_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/check_pickup.F check_pickup.F; fi if [ ! -L config_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_check.F config_check.F; fi if [ ! -L config_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_summary.F config_summary.F; fi if [ ! -L convective_adjustment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment.F convective_adjustment.F; fi if [ ! -L convective_adjustment_ini.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment_ini.F convective_adjustment_ini.F; fi if [ ! -L convectively_mixtracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convectively_mixtracer.F convectively_mixtracer.F; fi if [ ! -L convective_weights.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_weights.F convective_weights.F; fi if [ ! -L correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/correction_step.F correction_step.F; fi if [ ! -L cycle_ab_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_ab_tracer.F cycle_ab_tracer.F; fi if [ ! -L cycle_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_tracer.F cycle_tracer.F; fi if [ ! -L diags_oceanic_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_oceanic_surf_flux.F diags_oceanic_surf_flux.F; fi if [ ! -L diags_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_hyd.F diags_phi_hyd.F; fi if [ ! -L diags_phi_rlow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_rlow.F diags_phi_rlow.F; fi if [ ! -L diags_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_rho.F diags_rho.F; fi if [ ! -L diags_sound_speed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_sound_speed.F diags_sound_speed.F; fi if [ ! -L do_atmospheric_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_atmospheric_phys.F do_atmospheric_phys.F; fi if [ ! -L do_fields_blocking_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_fields_blocking_exchanges.F do_fields_blocking_exchanges.F; fi if [ ! -L do_stagger_fields_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_stagger_fields_exchanges.F do_stagger_fields_exchanges.F; fi if [ ! -L do_statevars_diags.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_diags.F do_statevars_diags.F; fi if [ ! -L do_statevars_tave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_tave.F do_statevars_tave.F; fi if [ ! -L do_the_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_the_model_io.F do_the_model_io.F; fi if [ ! -L do_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_write_pickup.F do_write_pickup.F; fi if [ ! -L dynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/dynamics.F dynamics.F; fi if [ ! -L external_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_fields_load.F external_fields_load.F; fi if [ ! -L external_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing.F external_forcing.F; fi if [ ! -L external_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing_surf.F external_forcing_surf.F; fi if [ ! -L find_alpha.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_alpha.F find_alpha.F; fi if [ ! -L find_hyd_press_1d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_hyd_press_1d.F find_hyd_press_1d.F; fi if [ ! -L find_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_rho.F find_rho.F; fi if [ ! -L forcing_surf_relax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forcing_surf_relax.F forcing_surf_relax.F; fi if [ ! -L forward_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forward_step.F forward_step.F; fi if [ ! -L freesurf_rescale_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freesurf_rescale_g.F freesurf_rescale_g.F; fi if [ ! -L freeze_surface.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freeze_surface.F freeze_surface.F; fi if [ ! -L grad_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/grad_sigma.F grad_sigma.F; fi if [ ! -L gsw_teos10.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/gsw_teos10.F gsw_teos10.F; fi if [ ! -L impldiff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/impldiff.F impldiff.F; fi if [ ! -L ini_cartesian_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cartesian_grid.F ini_cartesian_grid.F; fi if [ ! -L ini_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg2d.F ini_cg2d.F; fi if [ ! -L ini_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg3d.F ini_cg3d.F; fi if [ ! -L ini_cori.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cori.F ini_cori.F; fi if [ ! -L ini_curvilinear_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_curvilinear_grid.F ini_curvilinear_grid.F; fi if [ ! -L ini_cylinder_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cylinder_grid.F ini_cylinder_grid.F; fi if [ ! -L ini_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_depths.F ini_depths.F; fi if [ ! -L ini_dynvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_dynvars.F ini_dynvars.F; fi if [ ! -L ini_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_eos.F ini_eos.F; fi if [ ! -L ini_ffields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_ffields.F ini_ffields.F; fi if [ ! -L ini_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_fields.F ini_fields.F; fi if [ ! -L ini_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_forcing.F ini_forcing.F; fi if [ ! -L ini_global_domain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_global_domain.F ini_global_domain.F; fi if [ ! -L ini_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_grid.F ini_grid.F; fi if [ ! -L ini_linear_phisurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_linear_phisurf.F ini_linear_phisurf.F; fi if [ ! -L ini_local_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_local_grid.F ini_local_grid.F; fi if [ ! -L ini_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_masks_etc.F ini_masks_etc.F; fi if [ ! -L ini_mixing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mixing.F ini_mixing.F; fi if [ ! -L ini_mnc_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mnc_vars.F ini_mnc_vars.F; fi if [ ! -L ini_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_model_io.F ini_model_io.F; fi if [ ! -L ini_nh_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_fields.F ini_nh_fields.F; fi if [ ! -L ini_nh_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_vars.F ini_nh_vars.F; fi if [ ! -L ini_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nlfs_vars.F ini_nlfs_vars.F; fi if [ ! -L ini_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_parms.F ini_parms.F; fi if [ ! -L ini_p_ground.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_p_ground.F ini_p_ground.F; fi if [ ! -L ini_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_pressure.F ini_pressure.F; fi if [ ! -L ini_psurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_psurf.F ini_psurf.F; fi if [ ! -L ini_salt.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_salt.F ini_salt.F; fi if [ ! -L ini_sigma_hfac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_sigma_hfac.F ini_sigma_hfac.F; fi if [ ! -L ini_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_spherical_polar_grid.F ini_spherical_polar_grid.F; fi if [ ! -L ini_theta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_theta.F ini_theta.F; fi if [ ! -L initialise_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_fixed.F initialise_fixed.F; fi if [ ! -L initialise_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_varia.F initialise_varia.F; fi if [ ! -L ini_vel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vel.F ini_vel.F; fi if [ ! -L ini_vertical_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vertical_grid.F ini_vertical_grid.F; fi if [ ! -L integrate_for_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integrate_for_w.F integrate_for_w.F; fi if [ ! -L integr_continuity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integr_continuity.F integr_continuity.F; fi if [ ! -L load_fields_driver.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_fields_driver.F load_fields_driver.F; fi if [ ! -L load_grid_spacing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_grid_spacing.F load_grid_spacing.F; fi if [ ! -L load_ref_files.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_ref_files.F load_ref_files.F; fi if [ ! -L main_do_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/main_do_loop.F main_do_loop.F; fi if [ ! -L momentum_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/momentum_correction_step.F momentum_correction_step.F; fi if [ ! -L packages_boot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_boot.F packages_boot.F; fi if [ ! -L packages_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_check.F packages_check.F; fi if [ ! -L packages_error_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_error_msg.F packages_error_msg.F; fi if [ ! -L packages_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_fixed.F packages_init_fixed.F; fi if [ ! -L packages_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_variables.F packages_init_variables.F; fi if [ ! -L packages_print_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_print_msg.F packages_print_msg.F; fi if [ ! -L packages_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_readparms.F packages_readparms.F; fi if [ ! -L packages_unused_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_unused_msg.F packages_unused_msg.F; fi if [ ! -L packages_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_write_pickup.F packages_write_pickup.F; fi if [ ! -L plot_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/plot_field.F plot_field.F; fi if [ ! -L port_rand.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/port_rand.F port_rand.F; fi if [ ! -L post_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/post_cg3d.F post_cg3d.F; fi if [ ! -L pre_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pre_cg3d.F pre_cg3d.F; fi if [ ! -L pressure_for_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pressure_for_eos.F pressure_for_eos.F; fi if [ ! -L read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/read_pickup.F read_pickup.F; fi if [ ! -L remove_mean.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/remove_mean.F remove_mean.F; fi if [ ! -L reset_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/reset_nlfs_vars.F reset_nlfs_vars.F; fi if [ ! -L rotate_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_spherical_polar_grid.F rotate_spherical_polar_grid.F; fi if [ ! -L rotate_uv2en.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_uv2en.F rotate_uv2en.F; fi if [ ! -L salt_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/salt_integrate.F salt_integrate.F; fi if [ ! -L seawater.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/seawater.F seawater.F; fi if [ ! -L set_defaults.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_defaults.F set_defaults.F; fi if [ ! -L set_grid_factors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_grid_factors.F set_grid_factors.F; fi if [ ! -L set_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_parms.F set_parms.F; fi if [ ! -L set_ref_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_ref_state.F set_ref_state.F; fi if [ ! -L solve_for_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_for_pressure.F solve_for_pressure.F; fi if [ ! -L solve_pentadiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_pentadiagonal.F solve_pentadiagonal.F; fi if [ ! -L solve_tridiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_tridiagonal.F solve_tridiagonal.F; fi if [ ! -L solve_uv_tridiago.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_uv_tridiago.F solve_uv_tridiago.F; fi if [ ! -L state_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/state_summary.F state_summary.F; fi if [ ! -L swfrac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/swfrac.F swfrac.F; fi if [ ! -L taueddy_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_init_varia.F taueddy_init_varia.F; fi if [ ! -L taueddy_tendency_apply.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_tendency_apply.F taueddy_tendency_apply.F; fi if [ ! -L temp_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/temp_integrate.F temp_integrate.F; fi if [ ! -L the_main_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_main_loop.F the_main_loop.F; fi if [ ! -L the_model_main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_model_main.F the_model_main.F; fi if [ ! -L thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/thermodynamics.F thermodynamics.F; fi if [ ! -L timestep.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep.F timestep.F; fi if [ ! -L timestep_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_tracer.F timestep_tracer.F; fi if [ ! -L timestep_wvel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_wvel.F timestep_wvel.F; fi if [ ! -L tracers_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_correction_step.F tracers_correction_step.F; fi if [ ! -L tracers_iigw_correction.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_iigw_correction.F tracers_iigw_correction.F; fi if [ ! -L turnoff_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/turnoff_model_io.F turnoff_model_io.F; fi if [ ! -L update_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_cg2d.F update_cg2d.F; fi if [ ! -L update_etah.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etah.F update_etah.F; fi if [ ! -L update_etaws.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etaws.F update_etaws.F; fi if [ ! -L update_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_masks_etc.F update_masks_etc.F; fi if [ ! -L update_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_r_star.F update_r_star.F; fi if [ ! -L update_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_sigma.F update_sigma.F; fi if [ ! -L update_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_surf_dr.F update_surf_dr.F; fi if [ ! -L write_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_grid.F write_grid.F; fi if [ ! -L write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_pickup.F write_pickup.F; fi if [ ! -L write_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_state.F write_state.F; fi if [ ! -L gsl_ieee_env.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsl_ieee_env.c gsl_ieee_env.c; fi if [ ! -L ptwrapper.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ptwrapper.c ptwrapper.c; fi if [ ! -L setdir.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setdir.c setdir.c; fi if [ ! -L setrlstk.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setrlstk.c setrlstk.c; fi if [ ! -L sigreg.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/sigreg.c sigreg.c; fi if [ ! -L tim.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/tim.c tim.c; fi if [ ! -L timer_stats.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timer_stats.c timer_stats.c; fi if [ ! -L CPP_EEOPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h CPP_EEOPTIONS.h; fi if [ ! -L SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/SIZE.h SIZE.h; fi if [ ! -L DEBUG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/DEBUG_OPTIONS.h DEBUG_OPTIONS.h; fi if [ ! -L DIAGNOSTICS_CALC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_CALC.h DIAGNOSTICS_CALC.h; fi if [ ! -L DIAGNOSTICS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS.h DIAGNOSTICS.h; fi if [ ! -L DIAGNOSTICS_SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_SIZE.h DIAGNOSTICS_SIZE.h; fi if [ ! -L DIAG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAG_OPTIONS.h DIAG_OPTIONS.h; fi if [ ! -L DIAGSTATS_REGIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGSTATS_REGIONS.h DIAGSTATS_REGIONS.h; fi if [ ! -L gad_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev1_dir.h gad_ad_check_lev1_dir.h; fi if [ ! -L gad_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev2_dir.h gad_ad_check_lev2_dir.h; fi if [ ! -L gad_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev3_dir.h gad_ad_check_lev3_dir.h; fi if [ ! -L gad_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev4_dir.h gad_ad_check_lev4_dir.h; fi if [ ! -L GAD_FLUX_LIMITER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_FLUX_LIMITER.h GAD_FLUX_LIMITER.h; fi if [ ! -L GAD.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD.h GAD.h; fi if [ ! -L GAD_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_OPTIONS.h GAD_OPTIONS.h; fi if [ ! -L GAD_SOM_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_SOM_VARS.h GAD_SOM_VARS.h; fi if [ ! -L MDSIO_BUFF_3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_3D.h MDSIO_BUFF_3D.h; fi if [ ! -L MDSIO_BUFF_WH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_WH.h MDSIO_BUFF_WH.h; fi if [ ! -L MDSIO_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_OPTIONS.h MDSIO_OPTIONS.h; fi if [ ! -L MOM_COMMON_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_COMMON_OPTIONS.h MOM_COMMON_OPTIONS.h; fi if [ ! -L MOM_VISC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_VISC.h MOM_VISC.h; fi if [ ! -L MOM_FLUXFORM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM.h MOM_FLUXFORM.h; fi if [ ! -L MOM_FLUXFORM_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MOM_FLUXFORM_OPTIONS.h; fi if [ ! -L MOM_VECINV_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MOM_VECINV_OPTIONS.h; fi if [ ! -L MONITOR.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR.h MONITOR.h; fi if [ ! -L MONITOR_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR_OPTIONS.h MONITOR_OPTIONS.h; fi if [ ! -L obcs_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev1_dir.h obcs_ad_check_lev1_dir.h; fi if [ ! -L obcs_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev2_dir.h obcs_ad_check_lev2_dir.h; fi if [ ! -L obcs_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev3_dir.h obcs_ad_check_lev3_dir.h; fi if [ ! -L obcs_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev4_dir.h obcs_ad_check_lev4_dir.h; fi if [ ! -L OBCS_FIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_FIELDS.h OBCS_FIELDS.h; fi if [ ! -L OBCS_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_GRID.h OBCS_GRID.h; fi if [ ! -L OBCS_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_OPTIONS.h OBCS_OPTIONS.h; fi if [ ! -L OBCS_PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PARAMS.h OBCS_PARAMS.h; fi if [ ! -L OBCS_PTRACERS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PTRACERS.h OBCS_PTRACERS.h; fi if [ ! -L OBCS_SEAICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_SEAICE.h OBCS_SEAICE.h; fi if [ ! -L ORLANSKI.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/ORLANSKI.h ORLANSKI.h; fi if [ ! -L RW_MFLDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_MFLDS.h RW_MFLDS.h; fi if [ ! -L RW_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_OPTIONS.h RW_OPTIONS.h; fi if [ ! -L shelfice_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev1_dir.h shelfice_ad_check_lev1_dir.h; fi if [ ! -L shelfice_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev2_dir.h shelfice_ad_check_lev2_dir.h; fi if [ ! -L shelfice_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev3_dir.h shelfice_ad_check_lev3_dir.h; fi if [ ! -L shelfice_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev4_dir.h shelfice_ad_check_lev4_dir.h; fi if [ ! -L SHELFICE_COST.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_COST.h SHELFICE_COST.h; fi if [ ! -L SHELFICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE.h SHELFICE.h; fi if [ ! -L SHELFICE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_OPTIONS.h SHELFICE_OPTIONS.h; fi if [ ! -L SHELFICE_TAVE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_TAVE.h SHELFICE_TAVE.h; fi if [ ! -L TIMEAVE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_OPTIONS.h TIMEAVE_OPTIONS.h; fi if [ ! -L TIMEAVE_STATV.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_STATV.h TIMEAVE_STATV.h; fi if [ ! -L cmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_c.h cmumps_c.h; fi if [ ! -L cmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_root.h cmumps_root.h; fi if [ ! -L cmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_struc.h cmumps_struc.h; fi if [ ! -L dmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_c.h dmumps_c.h; fi if [ ! -L dmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_root.h dmumps_root.h; fi if [ ! -L dmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_struc.h dmumps_struc.h; fi if [ ! -L gklib_defs.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_defs.h gklib_defs.h; fi if [ ! -L gklib_rename.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_rename.h gklib_rename.h; fi if [ ! -L gklib_tls.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_tls.h gklib_tls.h; fi if [ ! -L metis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/metis.h metis.h; fi if [ ! -L mpicxx.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpicxx.h mpicxx.h; fi if [ ! -L mpif.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpif.h mpif.h; fi if [ ! -L mpi.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi.h mpi.h; fi if [ ! -L mpiof.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpiof.h mpiof.h; fi if [ ! -L mpio.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpio.h mpio.h; fi if [ ! -L mpi_proto.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi_proto.h mpi_proto.h; fi if [ ! -L mumps_compat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_compat.h mumps_compat.h; fi if [ ! -L mumps_c_types.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_c_types.h mumps_c_types.h; fi if [ ! -L mumps_int_def.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_int_def.h mumps_int_def.h; fi if [ ! -L parmetis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/parmetis.h parmetis.h; fi if [ ! -L petscao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscao.h petscao.h; fi if [ ! -L petscbag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbag.h petscbag.h; fi if [ ! -L petscblaslapack.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack.h petscblaslapack.h; fi if [ ! -L petscblaslapack_mangle.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack_mangle.h petscblaslapack_mangle.h; fi if [ ! -L petscbt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbt.h petscbt.h; fi if [ ! -L petsccharacteristic.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccharacteristic.h petsccharacteristic.h; fi if [ ! -L petscconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf.h petscconf.h; fi if [ ! -L petscconfiginfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconfiginfo.h petscconfiginfo.h; fi if [ ! -L petscconf_poison.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf_poison.h petscconf_poison.h; fi if [ ! -L petscconvest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconvest.h petscconvest.h; fi if [ ! -L petscctable.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscctable.h petscctable.h; fi if [ ! -L petsccxxcomplexfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccxxcomplexfix.h petsccxxcomplexfix.h; fi if [ ! -L petscdevice_cuda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cuda.h petscdevice_cuda.h; fi if [ ! -L petscdevice_cupm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cupm.h petscdevice_cupm.h; fi if [ ! -L petscdevice.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice.h petscdevice.h; fi if [ ! -L petscdevice_hip.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_hip.h petscdevice_hip.h; fi if [ ! -L petscdevicetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevicetypes.h petscdevicetypes.h; fi if [ ! -L petscdmadaptor.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptor.h petscdmadaptor.h; fi if [ ! -L petscdmceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmceed.h petscdmceed.h; fi if [ ! -L petscdmcomposite.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmcomposite.h petscdmcomposite.h; fi if [ ! -L petscdmda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmda.h petscdmda.h; fi if [ ! -L petscdmdatypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmdatypes.h petscdmdatypes.h; fi if [ ! -L petscdmfield.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmfield.h petscdmfield.h; fi if [ ! -L petscdmforest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmforest.h petscdmforest.h; fi if [ ! -L petscdm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdm.h petscdm.h; fi if [ ! -L petscdmlabelephemeral.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabelephemeral.h petscdmlabelephemeral.h; fi if [ ! -L petscdmlabel.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabel.h petscdmlabel.h; fi if [ ! -L petscdmmoab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmmoab.h petscdmmoab.h; fi if [ ! -L petscdmnetwork.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmnetwork.h petscdmnetwork.h; fi if [ ! -L petscdmpatch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmpatch.h petscdmpatch.h; fi if [ ! -L petscdmplexceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexceed.h petscdmplexceed.h; fi if [ ! -L petscdmplex.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplex.h petscdmplex.h; fi if [ ! -L petscdmplextransform.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransform.h petscdmplextransform.h; fi if [ ! -L petscdmplextransformtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransformtypes.h petscdmplextransformtypes.h; fi if [ ! -L petscdmplextypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextypes.h petscdmplextypes.h; fi if [ ! -L petscdmproduct.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmproduct.h petscdmproduct.h; fi if [ ! -L petscdmredundant.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmredundant.h petscdmredundant.h; fi if [ ! -L petscdmshell.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmshell.h petscdmshell.h; fi if [ ! -L petscdmsliced.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmsliced.h petscdmsliced.h; fi if [ ! -L petscdmstag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmstag.h petscdmstag.h; fi if [ ! -L petscdmswarm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmswarm.h petscdmswarm.h; fi if [ ! -L petscdmtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmtypes.h petscdmtypes.h; fi if [ ! -L petscdraw.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdraw.h petscdraw.h; fi if [ ! -L petscdrawtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdrawtypes.h petscdrawtypes.h; fi if [ ! -L petscds.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscds.h petscds.h; fi if [ ! -L petscdstypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdstypes.h petscdstypes.h; fi if [ ! -L petscdt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdt.h petscdt.h; fi if [ ! -L petscdualspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdualspace.h petscdualspace.h; fi if [ ! -L petscerror.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscerror.h petscerror.h; fi if [ ! -L petscfeceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfeceed.h petscfeceed.h; fi if [ ! -L petscfe.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfe.h petscfe.h; fi if [ ! -L petscfetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfetypes.h petscfetypes.h; fi if [ ! -L petscfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfix.h petscfix.h; fi if [ ! -L petscfvceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvceed.h petscfvceed.h; fi if [ ! -L petscfv.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfv.h petscfv.h; fi if [ ! -L petscfvtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvtypes.h petscfvtypes.h; fi if [ ! -L petsc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsc.h petsc.h; fi if [ ! -L petscis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscis.h petscis.h; fi if [ ! -L petscistypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscistypes.h petscistypes.h; fi if [ ! -L petscksp.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscksp.h petscksp.h; fi if [ ! -L petsclandau.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclandau.h petsclandau.h; fi if [ ! -L petsclayouthdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclayouthdf5.h petsclayouthdf5.h; fi if [ ! -L petsclogdeprecated.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogdeprecated.h petsclogdeprecated.h; fi if [ ! -L petsclog.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclog.h petsclog.h; fi if [ ! -L petsclogtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogtypes.h petsclogtypes.h; fi if [ ! -L petscmachineinfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmachineinfo.h petscmachineinfo.h; fi if [ ! -L petscmacros.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmacros.h petscmacros.h; fi if [ ! -L petscmatcoarsen.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatcoarsen.h petscmatcoarsen.h; fi if [ ! -L petscmatelemental.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatelemental.h petscmatelemental.h; fi if [ ! -L petscmat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmat.h petscmat.h; fi if [ ! -L petscmath.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmath.h petscmath.h; fi if [ ! -L petscmathtool.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathtool.h petscmathtool.h; fi if [ ! -L petscmathypre.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathypre.h petscmathypre.h; fi if [ ! -L petscmatlab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatlab.h petscmatlab.h; fi if [ ! -L petscoptions.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscoptions.h petscoptions.h; fi if [ ! -L petscpartitioner.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpartitioner.h petscpartitioner.h; fi if [ ! -L petscpc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpc.h petscpc.h; fi if [ ! -L petscpctypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpctypes.h petscpctypes.h; fi if [ ! -L petscpf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpf.h petscpf.h; fi if [ ! -L petscpkg_version.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpkg_version.h petscpkg_version.h; fi if [ ! -L petscsection.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsection.h petscsection.h; fi if [ ! -L petscsectiontypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsectiontypes.h petscsectiontypes.h; fi if [ ! -L petscsf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsf.h petscsf.h; fi if [ ! -L petscsftypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsftypes.h petscsftypes.h; fi if [ ! -L petscsnes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnes.h petscsnes.h; fi if [ ! -L petscspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscspace.h petscspace.h; fi if [ ! -L petscstring.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscstring.h petscstring.h; fi if [ ! -L petscsys.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsys.h petscsys.h; fi if [ ! -L petscsystypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsystypes.h petscsystypes.h; fi if [ ! -L petsctao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao.h petsctao.h; fi if [ ! -L petsctaolinesearch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctaolinesearch.h petsctaolinesearch.h; fi if [ ! -L petsctime.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctime.h petsctime.h; fi if [ ! -L petscts.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscts.h petscts.h; fi if [ ! -L petscvec.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscvec.h petscvec.h; fi if [ ! -L petscversion.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscversion.h petscversion.h; fi if [ ! -L petscviennacl.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviennacl.h petscviennacl.h; fi if [ ! -L petscviewerexodusii.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerexodusii.h petscviewerexodusii.h; fi if [ ! -L petscviewer.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewer.h petscviewer.h; fi if [ ! -L petscviewerhdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerhdf5.h petscviewerhdf5.h; fi if [ ! -L petscviewersaws.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewersaws.h petscviewersaws.h; fi if [ ! -L petscviewertypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewertypes.h petscviewertypes.h; fi if [ ! -L petscwebclient.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscwebclient.h petscwebclient.h; fi if [ ! -L ricehdf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/ricehdf.h ricehdf.h; fi if [ ! -L smumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_c.h smumps_c.h; fi if [ ! -L smumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_root.h smumps_root.h; fi if [ ! -L smumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_struc.h smumps_struc.h; fi if [ ! -L szip_adpt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/szip_adpt.h szip_adpt.h; fi if [ ! -L szlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/szlib.h szlib.h; fi if [ ! -L zconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zconf.h zconf.h; fi if [ ! -L zlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zlib.h zlib.h; fi if [ ! -L zmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_c.h zmumps_c.h; fi if [ ! -L zmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_root.h zmumps_root.h; fi if [ ! -L zmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_struc.h zmumps_struc.h; fi if [ ! -L BAR2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BAR2.h BAR2.h; fi if [ ! -L BARRIER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BARRIER.h BARRIER.h; fi if [ ! -L CPP_EEMACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CPP_EEMACROS.h CPP_EEMACROS.h; fi if [ ! -L CUMULSUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CUMULSUM.h CUMULSUM.h; fi if [ ! -L DEF_IN_MAKEFILE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/DEF_IN_MAKEFILE.h DEF_IN_MAKEFILE.h; fi if [ ! -L EEBUFF_SCPU.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEBUFF_SCPU.h EEBUFF_SCPU.h; fi if [ ! -L EEPARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEPARAMS.h EEPARAMS.h; fi if [ ! -L EESUPPORT.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EESUPPORT.h EESUPPORT.h; fi if [ ! -L EXCH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EXCH.h EXCH.h; fi if [ ! -L GLOBAL_MAX.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_MAX.h GLOBAL_MAX.h; fi if [ ! -L GLOBAL_SUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_SUM.h GLOBAL_SUM.h; fi if [ ! -L MAIN_PDIRECTIVES1.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES1.h MAIN_PDIRECTIVES1.h; fi if [ ! -L MAIN_PDIRECTIVES2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES2.h MAIN_PDIRECTIVES2.h; fi if [ ! -L MPI_INFO.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MPI_INFO.h MPI_INFO.h; fi if [ ! -L SIGREG.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/SIGREG.h SIGREG.h; fi if [ ! -L CG2D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG2D.h CG2D.h; fi if [ ! -L CG3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG3D.h CG3D.h; fi if [ ! -L CPP_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h CPP_OPTIONS.h; fi if [ ! -L DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXC_MACROS.h DXC_MACROS.h; fi if [ ! -L DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXF_MACROS.h DXF_MACROS.h; fi if [ ! -L DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXG_MACROS.h DXG_MACROS.h; fi if [ ! -L DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXV_MACROS.h DXV_MACROS.h; fi if [ ! -L DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYC_MACROS.h DYC_MACROS.h; fi if [ ! -L DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYF_MACROS.h DYF_MACROS.h; fi if [ ! -L DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYG_MACROS.h DYG_MACROS.h; fi if [ ! -L DYNVARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYNVARS.h DYNVARS.h; fi if [ ! -L DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYU_MACROS.h DYU_MACROS.h; fi if [ ! -L EOS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/EOS.h EOS.h; fi if [ ! -L FCORI_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FCORI_MACROS.h FCORI_MACROS.h; fi if [ ! -L FFIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FFIELDS.h FFIELDS.h; fi if [ ! -L GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID.h GRID.h; fi if [ ! -L GRID_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID_MACROS.h GRID_MACROS.h; fi if [ ! -L HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACC_MACROS.h HFACC_MACROS.h; fi if [ ! -L HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACS_MACROS.h HFACS_MACROS.h; fi if [ ! -L HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACW_MACROS.h HFACW_MACROS.h; fi if [ ! -L MASKS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKS_MACROS.h MASKS_MACROS.h; fi if [ ! -L MASKW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKW_MACROS.h MASKW_MACROS.h; fi if [ ! -L NH_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/NH_VARS.h NH_VARS.h; fi if [ ! -L PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/PARAMS.h PARAMS.h; fi if [ ! -L RA_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RA_MACROS.h RA_MACROS.h; fi if [ ! -L RAS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAS_MACROS.h RAS_MACROS.h; fi if [ ! -L RAW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAW_MACROS.h RAW_MACROS.h; fi if [ ! -L RECIP_DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXC_MACROS.h RECIP_DXC_MACROS.h; fi if [ ! -L RECIP_DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXF_MACROS.h RECIP_DXF_MACROS.h; fi if [ ! -L RECIP_DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXG_MACROS.h RECIP_DXG_MACROS.h; fi if [ ! -L RECIP_DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXV_MACROS.h RECIP_DXV_MACROS.h; fi if [ ! -L RECIP_DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYC_MACROS.h RECIP_DYC_MACROS.h; fi if [ ! -L RECIP_DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYF_MACROS.h RECIP_DYF_MACROS.h; fi if [ ! -L RECIP_DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYG_MACROS.h RECIP_DYG_MACROS.h; fi if [ ! -L RECIP_DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYU_MACROS.h RECIP_DYU_MACROS.h; fi if [ ! -L RECIP_HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACC_MACROS.h RECIP_HFACC_MACROS.h; fi if [ ! -L RECIP_HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACS_MACROS.h RECIP_HFACS_MACROS.h; fi if [ ! -L RECIP_HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACW_MACROS.h RECIP_HFACW_MACROS.h; fi if [ ! -L RESTART.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RESTART.h RESTART.h; fi if [ ! -L SET_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SET_GRID.h SET_GRID.h; fi if [ ! -L SOLVE_FOR_PRESSURE3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE3D.h SOLVE_FOR_PRESSURE3D.h; fi if [ ! -L SOLVE_FOR_PRESSURE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE.h SOLVE_FOR_PRESSURE.h; fi if [ ! -L SURFACE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SURFACE.h SURFACE.h; fi if [ ! -L TANPHIATU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATU_MACROS.h TANPHIATU_MACROS.h; fi if [ ! -L TANPHIATV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATV_MACROS.h TANPHIATV_MACROS.h; fi if [ ! -L THE_MODEL_COMMON_BLOCKS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/THE_MODEL_COMMON_BLOCKS.h THE_MODEL_COMMON_BLOCKS.h; fi if [ ! -L XC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/XC_MACROS.h XC_MACROS.h; fi if [ ! -L YC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/YC_MACROS.h YC_MACROS.h; fi Creating FC_NAMEMANGLE.h ... echo "#define FC_NAMEMANGLE(X) X ## _" > FC_NAMEMANGLE.h Creating BUILD_INFO.h ... echo "#define THISVER 'checkpoint68i'" > BUILD_INFO.h echo "#define THISUSER 'jenkins'" >> BUILD_INFO.h echo "#define THISDATE 'Sun 28 Apr 2024 02:29:04 PM PDT'" >> BUILD_INFO.h echo "#define THISHOST 'debian-linux-vm'" >> BUILD_INFO.h make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build' /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/xmakedepend -f Makefile -o .f -DWORDLENGTH=4 -DNML_TERMINATOR -DALLOW_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_ETIME_SBR -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -DHAVE_FLUSH -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include cpl_issm.F do_oceanic_phys.F eeboot_minimal.F eedie.F chksum_tiled.F debug_call.F debug_cs_corner_uv.F debug_enter.F debug_fld_stats_rl.F debug_fld_stats_rs.F debug_leave.F debug_msg.F debug_stats_rl.F debug_stats_rs.F fill_in_corners_rl.F write_fullarray_rl.F write_fullarray_rs.F diag_calc_psivel.F diag_cg2d.F diagnostics_addtolist.F diagnostics_calc_phivel.F diagnostics_check.F diagnostics_clear.F diagnostics_fill.F diagnostics_fill_field.F diagnostics_fill_rs.F diagnostics_fill_state.F diagnostics_fract_fill.F diagnostics_ini_io.F diagnostics_init_early.F diagnostics_init_fixed.F diagnostics_init_varia.F diagnostics_interp_p2p.F diagnostics_interp_vert.F diagnostics_is_on.F diagnostics_list_check.F diagnostics_main_init.F diagnostics_mnc_out.F diagnostics_out.F diagnostics_readparms.F diagnostics_read_pickup.F diagnostics_scale_fill.F diagnostics_scale_fill_rs.F diagnostics_set_calc.F diagnostics_setdiag.F diagnostics_set_levels.F diagnostics_set_pointers.F diagnostics_status_error.F diagnostics_sum_levels.F diagnostics_summary.F diagnostics_switch_onoff.F diagnostics_utils.F diagnostics_write_adj.F diagnostics_write.F diagnostics_write_pickup.F diagstats_ascii_out.F diagstats_calc.F diagstats_clear.F diagstats_close_io.F diagstats_fill.F diagstats_global.F diagstats_ini_io.F diagstats_local.F diagstats_mnc_out.F diagstats_others_calc.F diagstats_output.F diagstats_setdiag.F diagstats_set_pointers.F diagstats_set_regions.F diag_vegtile_fill.F gad_advection.F gad_advscheme.F gad_biharm_r.F gad_biharm_x.F gad_biharm_y.F gad_c2_adv_r.F gad_c2_adv_x.F gad_c2_adv_y.F gad_c2_impl_r.F gad_c4_adv_r.F gad_c4_adv_x.F gad_c4_adv_y.F gad_calc_rhs.F gad_check.F gad_del2.F gad_diagnostics_init.F gad_diagnostics_state.F gad_diff_r.F gad_diff_x.F gad_diff_y.F gad_dst2u1_adv_r.F gad_dst2u1_adv_x.F gad_dst2u1_adv_y.F gad_dst2u1_impl_r.F gad_dst3_adv_r.F gad_dst3_adv_x.F gad_dst3_adv_y.F gad_dst3fl_adv_r.F gad_dst3fl_adv_x.F gad_dst3fl_adv_y.F gad_dst3fl_impl_r.F gad_exch_som.F gad_fluxlimit_adv_r.F gad_fluxlimit_adv_x.F gad_fluxlimit_adv_y.F gad_fluxlimit_impl_r.F gad_grad_x.F gad_grad_y.F gad_implicit_r.F gad_init_fixed.F gad_init_varia.F gad_os7mp_adv_r.F gad_os7mp_adv_x.F gad_os7mp_adv_y.F gad_osc_hat_r.F gad_osc_hat_x.F gad_osc_hat_y.F gad_osc_mul_r.F gad_osc_mul_x.F gad_osc_mul_y.F gad_plm_fun.F gad_ppm_adv_r.F gad_ppm_adv_x.F gad_ppm_adv_y.F gad_ppm_flx_r.F gad_ppm_flx_x.F gad_ppm_flx_y.F gad_ppm_fun.F gad_ppm_hat_r.F gad_ppm_hat_x.F gad_ppm_hat_y.F gad_ppm_p3e_r.F gad_ppm_p3e_x.F gad_ppm_p3e_y.F gad_pqm_adv_r.F gad_pqm_adv_x.F gad_pqm_adv_y.F gad_pqm_flx_r.F gad_pqm_flx_x.F gad_pqm_flx_y.F gad_pqm_fun.F gad_pqm_hat_r.F gad_pqm_hat_x.F gad_pqm_hat_y.F gad_pqm_p5e_r.F gad_pqm_p5e_x.F gad_pqm_p5e_y.F gad_read_pickup.F gad_som_advect.F gad_som_adv_r.F gad_som_adv_x.F gad_som_adv_y.F gad_som_exchanges.F gad_som_fill_cs_corner.F gad_som_lim_r.F gad_som_prep_cs_corner.F gad_u3_adv_r.F gad_u3_adv_x.F gad_u3_adv_y.F gad_u3c4_impl_r.F gad_write_pickup.F salt_fill.F mdsio_buffertorl.F mdsio_buffertors.F mdsio_check4file.F mdsio_facef_read.F mdsio_gl.F mdsio_gl_slice.F mdsio_pass_r4torl.F mdsio_pass_r4tors.F mdsio_pass_r8torl.F mdsio_pass_r8tors.F mdsio_rd_rec_rl.F mdsio_rd_rec_rs.F mdsio_read_field.F mdsio_read_meta.F mdsio_read_section.F mdsio_read_tape.F mdsio_readvec_loc.F mdsio_read_whalos.F mdsio_rw_field.F mdsio_rw_slice.F mdsio_seg4torl.F mdsio_seg4tors.F mdsio_seg8torl.F mdsio_seg8tors.F mdsio_segxtorx_2d.F mdsio_write_field.F mdsio_writelocal.F mdsio_write_meta.F mdsio_write_section.F mdsio_write_tape.F mdsio_writevec_loc.F mdsio_write_whalos.F mdsio_wr_metafiles.F mdsio_wr_rec_rl.F mdsio_wr_rec_rs.F mom_calc_3d_strain.F mom_calc_absvort3.F mom_calc_hdiv.F mom_calc_hfacz.F mom_calc_ke.F mom_calc_relvort3.F mom_calc_smag_3d.F mom_calc_strain.F mom_calc_tension.F mom_calc_visc.F mom_diagnostics_init.F mom_hdissip.F mom_init_fixed.F mom_quasihydrostatic.F mom_u_botdrag_coeff.F mom_u_coriolis_nh.F mom_u_implicit_r.F mom_u_metric_nh.F mom_u_rviscflux.F mom_u_sidedrag.F mom_uv_smag_3d.F mom_v_botdrag_coeff.F mom_v_coriolis_nh.F mom_v_implicit_r.F mom_visc_qgl_limit.F mom_visc_qgl_stretch.F mom_v_metric_nh.F mom_v_rviscflux.F mom_v_sidedrag.F mom_w_coriolis_nh.F mom_w_metric_nh.F mom_w_sidedrag.F mom_w_smag_3d.F mom_calc_rtrans.F mom_fluxform.F mom_u_adv_uu.F mom_u_adv_vu.F mom_u_adv_wu.F mom_u_coriolis.F mom_u_del2u.F mom_u_metric_cylinder.F mom_u_metric_sphere.F mom_uv_boundary.F mom_u_xviscflux.F mom_u_yviscflux.F mom_v_adv_uv.F mom_v_adv_vv.F mom_v_adv_wv.F mom_v_coriolis.F mom_v_del2v.F mom_v_metric_cylinder.F mom_v_metric_sphere.F mom_v_xviscflux.F mom_v_yviscflux.F mom_vecinv.F mom_vi_coriolis.F mom_vi_del2uv.F mom_vi_hdissip.F mom_vi_u_coriolis_c4.F mom_vi_u_coriolis.F mom_vi_u_grad_ke.F mom_vi_u_vertshear.F mom_vi_v_coriolis_c4.F mom_vi_v_coriolis.F mom_vi_v_grad_ke.F mom_vi_v_vertshear.F mon_advcfl.F mon_advcflw2.F mon_advcflw.F mon_calc_advcfl.F mon_calc_stats_rl.F mon_calc_stats_rs.F mon_init.F monitor_ad.F monitor.F monitor_g.F mon_ke.F mon_out.F mon_printstats_rl.F mon_printstats_rs.F mon_set_iounit.F mon_set_pref.F mon_solution.F mon_stats_latbnd_rl.F mon_stats_rl.F mon_stats_rs.F mon_surfcor.F mon_vort3.F mon_writestats_rl.F mon_writestats_rs.F obcs_add_tides.F obcs_adjust.F obcs_adjust_uvice.F obcs_apply_eta.F obcs_apply_ptracer.F obcs_apply_r_star.F obcs_apply_seaice.F obcs_apply_surf_dr.F obcs_apply_ts.F obcs_apply_uv.F obcs_apply_uvice.F obcs_apply_w.F obcs_balance_flow.F obcs_calc.F obcs_calc_stevens.F obcs_check_depths.F obcs_check.F obcs_copy_tracer.F obcs_copy_uv_n.F obcs_diag_balance.F obcs_exchanges.F obcs_exf_load.F obcs_fields_load.F obcs_init_fixed.F obcs_init_variables.F obcs_monitor.F obcs_mon_stats.F obcs_output.F obcs_prescribe_read.F obcs_readparms.F obcs_read_pickup.F obcs_save_uv_n.F obcs_seaice_sponge.F obcs_set_connect.F obcs_sponge.F obcs_u1_adv_tracer.F obcs_write_pickup.F orlanski_east.F orlanski_init.F orlanski_north.F orlanski_south.F orlanski_west.F get_write_global_fld.F read_fld_xy_rl.F read_fld_xy_rs.F read_fld_xyz_rl.F read_fld_xyz_rs.F read_glvec_rl.F read_glvec_rs.F read_mflds.F read_rec.F rw_get_suffix.F set_write_global_fld.F write_fld_3d_rl.F write_fld_3d_rs.F write_fld_s3d_rl.F write_fld_s3d_rs.F write_fld_xy_rl.F write_fld_xy_rs.F write_fld_xyz_rl.F write_fld_xyz_rs.F write_glvec_rl.F write_glvec_rs.F write_local_rl.F write_local_rs.F write_rec.F shelfice_check.F shelfice_cost_accumulate.F shelfice_cost_final.F shelfice_cost_shifwflx.F shelfice_diagnostics_drag.F shelfice_forcing.F shelfice_forcing_surf.F shelfice_init_depths.F shelfice_init_fixed.F shelfice_init_varia.F shelfice_mask_seaice.F shelfice_mnc_init.F shelfice_output.F shelfice_readparms.F shelfice_read_pickup.F shelfice_remesh_calc_w.F shelfice_remesh_c_mask.F shelfice_remeshing.F shelfice_remesh_state.F shelfice_remesh_uv_mask.F shelfice_step_icemass.F shelfice_thermodynamics.F shelfice_u_drag_coeff.F shelfice_v_drag_coeff.F shelfice_write_pickup.F timeave_cumul_1k1t.F timeave_cumul_1t.F timeave_cumul_1vfc.F timeave_cumul_2v.F timeave_cumul_2vfc.F timeave_cumulate.F timeave_cumul_dif_1t.F timeave_init_fixed.F timeave_norma_2v.F timeave_normalize.F timeave_reset.F timeave_statvars.F timeave_statv_write.F timeave_surf_flux.F all_proc_die.F bar2.F bar_check.F barrier.F check_threads.F comm_stats.F cumulsum_z_tile.F different_multiple.F diff_phase_multiple.F eeboot.F eedata_example.F eeintro_msg.F eeset_parms.F eewrite_eeenv.F exch0_r4.F exch0_r8.F exch0_rl.F exch0_rs.F exch1_bg_r4_cube.F exch1_bg_r8_cube.F exch1_bg_rl_cube.F exch1_bg_rs_cube.F exch1_r4_cube.F exch1_r4.F exch1_r8_cube.F exch1_r8.F exch1_rl_ad.F exch1_rl_cube_ad.F exch1_rl_cube.F exch1_rl.F exch1_rs_ad.F exch1_rs_cube_ad.F exch1_rs_cube.F exch1_rs.F exch1_uv_r4_cube.F exch1_uv_r8_cube.F exch1_uv_rl_cube.F exch1_uv_rs_cube.F exch1_z_r4_cube.F exch1_z_r8_cube.F exch1_z_rl_cube.F exch1_z_rs_cube.F exch_3d_r4.F exch_3d_r8.F exch_3d_rl.F exch_3d_rs.F exch_cycle_ebl.F exch_init.F exch_r4_recv_get_x.F exch_r4_recv_get_y.F exch_r4_send_put_x.F exch_r4_send_put_y.F exch_r8_recv_get_x.F exch_r8_recv_get_y.F exch_r8_send_put_x.F exch_r8_send_put_y.F exch_rl_recv_get_x.F exch_rl_recv_get_y.F exch_rl_send_put_x.F exch_rl_send_put_y.F exch_rs_recv_get_x.F exch_rs_recv_get_y.F exch_rs_send_put_x.F exch_rs_send_put_y.F exch_s3d_r4.F exch_s3d_r8.F exch_s3d_rl.F exch_s3d_rs.F exch_sm_3d_r4.F exch_sm_3d_r8.F exch_sm_3d_rl.F exch_sm_3d_rs.F exch_uv_3d_r4.F exch_uv_3d_r8.F exch_uv_3d_rl.F exch_uv_3d_rs.F exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rs.F exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rs.F exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rs.F exch_uv_xy_r4.F exch_uv_xy_r8.F exch_uv_xy_rl.F exch_uv_xy_rs.F exch_uv_xyz_r4.F exch_uv_xyz_r8.F exch_uv_xyz_rl.F exch_uv_xyz_rs.F exch_xy_r4.F exch_xy_r8.F exch_xy_rl.F exch_xy_rs.F exch_xyz_r4.F exch_xyz_r8.F exch_xyz_rl.F exch_xyz_rs.F exch_z_3d_r4.F exch_z_3d_r8.F exch_z_3d_rl.F exch_z_3d_rs.F fill_cs_corner_ag_rl.F fill_cs_corner_tr_rl.F fill_cs_corner_uv_rl.F fill_cs_corner_uv_rs.F fool_the_compiler.F gather_2d_r4.F gather_2d_r8.F gather_2d_wh_r4.F gather_2d_wh_r8.F gather_vec_r4.F gather_vec_r8.F gather_xz.F gather_yz.F get_periodic_interval.F global_max.F global_sum.F global_sum_singlecpu.F global_sum_tile.F global_vec_sum.F gsum.F ini_communication_patterns.F ini_procs.F ini_threading_environment.F lef_zero.F main.F master_cpu_io.F master_cpu_thread.F mds_byteswapi4.F mds_byteswapr4.F mds_byteswapr8.F mdsfindunit.F mds_flush.F mds_reclen.F memsync.F nml_change_syntax.F nml_set_terminator.F open_copy_data_file.F print.F reset_halo.F scatter_2d_r4.F scatter_2d_r8.F scatter_2d_wh_r4.F scatter_2d_wh_r8.F scatter_vec_r4.F scatter_vec_r8.F scatter_xz.F scatter_yz.F stop_if_error.F timers.F utils.F write_utils.F adams_bashforth2.F adams_bashforth3.F add_walls2masks.F apply_forcing.F calc_3d_diffusivity.F calc_adv_flow.F calc_div_ghat.F calc_eddy_stress.F calc_grad_phi_fv.F calc_grad_phi_hyd.F calc_grad_phi_surf.F calc_grid_angles.F calc_gw.F calc_ivdc.F calc_oce_mxlayer.F calc_phi_hyd.F calc_r_star.F calc_surf_dr.F calc_viscosity.F calc_wsurf_tr.F cg2d_ex0.F cg2d.F cg2d_nsa.F cg2d_sr.F cg3d_ex0.F cg3d.F check_pickup.F config_check.F config_summary.F convective_adjustment.F convective_adjustment_ini.F convectively_mixtracer.F convective_weights.F correction_step.F cycle_ab_tracer.F cycle_tracer.F diags_oceanic_surf_flux.F diags_phi_hyd.F diags_phi_rlow.F diags_rho.F diags_sound_speed.F do_atmospheric_phys.F do_fields_blocking_exchanges.F do_stagger_fields_exchanges.F do_statevars_diags.F do_statevars_tave.F do_the_model_io.F do_write_pickup.F dynamics.F external_fields_load.F external_forcing.F external_forcing_surf.F find_alpha.F find_hyd_press_1d.F find_rho.F forcing_surf_relax.F forward_step.F freesurf_rescale_g.F freeze_surface.F grad_sigma.F gsw_teos10.F impldiff.F ini_cartesian_grid.F ini_cg2d.F ini_cg3d.F ini_cori.F ini_curvilinear_grid.F ini_cylinder_grid.F ini_depths.F ini_dynvars.F ini_eos.F ini_ffields.F ini_fields.F ini_forcing.F ini_global_domain.F ini_grid.F ini_linear_phisurf.F ini_local_grid.F ini_masks_etc.F ini_mixing.F ini_mnc_vars.F ini_model_io.F ini_nh_fields.F ini_nh_vars.F ini_nlfs_vars.F ini_parms.F ini_p_ground.F ini_pressure.F ini_psurf.F ini_salt.F ini_sigma_hfac.F ini_spherical_polar_grid.F ini_theta.F initialise_fixed.F initialise_varia.F ini_vel.F ini_vertical_grid.F integrate_for_w.F integr_continuity.F load_fields_driver.F load_grid_spacing.F load_ref_files.F main_do_loop.F momentum_correction_step.F packages_boot.F packages_check.F packages_error_msg.F packages_init_fixed.F packages_init_variables.F packages_print_msg.F packages_readparms.F packages_unused_msg.F packages_write_pickup.F plot_field.F port_rand.F post_cg3d.F pre_cg3d.F pressure_for_eos.F read_pickup.F remove_mean.F reset_nlfs_vars.F rotate_spherical_polar_grid.F rotate_uv2en.F salt_integrate.F seawater.F set_defaults.F set_grid_factors.F set_parms.F set_ref_state.F solve_for_pressure.F solve_pentadiagonal.F solve_tridiagonal.F solve_uv_tridiago.F state_summary.F swfrac.F taueddy_init_varia.F taueddy_tendency_apply.F temp_integrate.F the_main_loop.F the_model_main.F thermodynamics.F timestep.F timestep_tracer.F timestep_wvel.F tracers_correction_step.F tracers_iigw_correction.F turnoff_model_io.F update_cg2d.F update_etah.F update_etaws.F update_masks_etc.F update_r_star.F update_sigma.F update_surf_dr.F write_grid.F write_pickup.F write_state.F Appending dependencies to Makefile /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/f90mkdepend >> Makefile WARNING: f90mkdepend: no source file found for module `petscdtbinomial()` WARNING: f90mkdepend: no source file found for module `seterra()` WARNING: f90mkdepend: no source file found for module `seterra()` WARNING: f90mkdepend: no source file found for module `petsccalla()`. WARNING: f90mkdepend: no source file found for module `chkmema` WARNING: f90mkdepend: no source file found for module `petscstackpushexternal()` WARNING: f90mkdepend: no source file found for module `petscfunctionbeginuser` WARNING: f90mkdepend: no source file found for module this WARNING: f90mkdepend: no source file found for module `petscobjectoptionsbegin()` WARNING: f90mkdepend: no source file found for module `petsc_null_integer` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module the WARNING: f90mkdepend: no source file found for module `petscclassidregister()` WARNING: f90mkdepend: no source file found for module `petsccount_fmt` WARNING: f90mkdepend: no source file found for module of WARNING: f90mkdepend: no source file found for module `petscviewerfilesetmode()` rm -f makedepend.out [41;37m step #6: RunUncoupledMITgcm [0m Year: 0 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.083333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.16667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.25 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.33333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.41667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.5 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.58333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.66667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.75 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.83333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.91667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 1 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END [41;37m step #7: CreateMesh [0m Info: creating coordinates in polar stereographic (Std Latitude: 71S Meridian: 0) saving model as: Models/IceOcean.CreateMesh [41;37m step #8: MeshGeometry [0m saving model as: Models/IceOcean.MeshGeometry [41;37m step #9: ParameterizeIce [0m saving model as: Models/IceOcean.ParameterizeIce [41;37m step #10: RunUncoupledISSM [0m checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/12 time [yr]: 0.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 2/12 time [yr]: 0.17 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 3/12 time [yr]: 0.25 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 4/12 time [yr]: 0.33 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 5/12 time [yr]: 0.42 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 6/12 time [yr]: 0.50 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 7/12 time [yr]: 0.58 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 8/12 time [yr]: 0.67 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 9/12 time [yr]: 0.75 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 10/12 time [yr]: 0.83 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 11/12 time [yr]: 0.92 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 12/12 time [yr]: 1.00 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.109297 Total Core solution elapsed time: 2.96164 Linear solver elapsed time: 1.85562 (63%) Total elapsed time: 0 hrs 0 min 3 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster saving model as: Models/IceOcean.RunUncoupledISSM [41;37m step #11: RunCoupledMITgcmISSM [0m Year: 0 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0288863 Total Core solution elapsed time: 0.518797 Linear solver elapsed time: 0.326033 (63%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.083333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.17 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0294967 Total Core solution elapsed time: 0.2246 Linear solver elapsed time: 0.146612 (65%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.16667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.25 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0336898 Total Core solution elapsed time: 0.244867 Linear solver elapsed time: 0.160779 (66%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.25 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.33 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0283494 Total Core solution elapsed time: 0.191627 Linear solver elapsed time: 0.118888 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.33333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.42 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0281543 Total Core solution elapsed time: 0.198923 Linear solver elapsed time: 0.123985 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.41667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.50 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0303295 Total Core solution elapsed time: 0.233466 Linear solver elapsed time: 0.149873 (64%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.5 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.58 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0298819 Total Core solution elapsed time: 0.207567 Linear solver elapsed time: 0.129485 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.58333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/2 time [yr]: 0.67 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0405349 Total Core solution elapsed time: 0.206461 Linear solver elapsed time: 0.126847 (61%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.66667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.75 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0278123 Total Core solution elapsed time: 0.199089 Linear solver elapsed time: 0.125587 (63%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.75 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.83 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.043227 Total Core solution elapsed time: 0.209959 Linear solver elapsed time: 0.131058 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.83333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/2 time [yr]: 0.92 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0460865 Total Core solution elapsed time: 0.211158 Linear solver elapsed time: 0.131895 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 0.91667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 1.00 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0247459 Total Core solution elapsed time: 0.181864 Linear solver elapsed time: 0.112916 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Year: 1 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 1.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.027859 Total Core solution elapsed time: 0.183399 Linear solver elapsed time: 0.113878 (62%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster saving model as: Models/IceOcean.RunCoupledMITgcmISSM SUCCESS difference: 0 < 2e-13 test id: 4001 test name: IceOcean field: Base1 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: Melting1 SUCCESS difference: 5.4e-15 < 8e-06 test id: 4001 test name: IceOcean field: Vx2 SUCCESS difference: 1e-14 < 7e-06 test id: 4001 test name: IceOcean field: Vy2 SUCCESS difference: 1.3e-15 < 2e-07 test id: 4001 test name: IceOcean field: Thickness2 SUCCESS difference: 2.5e-16 < 2e-08 test id: 4001 test name: IceOcean field: Base2 SUCCESS difference: 3.4e-16 < 3e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset2 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate2 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: Melting2 SUCCESS difference: 8.1e-15 < 8e-06 test id: 4001 test name: IceOcean field: Vx3 SUCCESS difference: 8.5e-15 < 7e-06 test id: 4001 test name: IceOcean field: Vy3 SUCCESS difference: 2.3e-15 < 4e-07 test id: 4001 test name: IceOcean field: Thickness3 SUCCESS difference: 4.6e-16 < 3e-08 test id: 4001 test name: IceOcean field: Base3 SUCCESS difference: 4.3e-16 < 5e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset3 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate3 SUCCESS difference: 0 < 6e-08 test id: 4001 test name: IceOcean field: Melting3 SUCCESS difference: 1e-14 < 8e-06 test id: 4001 test name: IceOcean field: Vx4 SUCCESS difference: 2.2e-14 < 7e-06 test id: 4001 test name: IceOcean field: Vy4 SUCCESS difference: 2.5e-15 < 5e-07 test id: 4001 test name: IceOcean field: Thickness4 SUCCESS difference: 6e-16 < 4e-08 test id: 4001 test name: IceOcean field: Base4 SUCCESS difference: 4.3e-16 < 8e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset4 SUCCESS difference: 0 < 6e-08 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate4 SUCCESS difference: 0 < 3e-07 test id: 4001 test name: IceOcean field: Melting4 +++ exit code: 0 +++ error: 0 Recording test results Publishing build last changes... Last changes from revision 28232 (current) to 28231 (previous) published successfully! Finished: SUCCESS