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Started by GitHub push by MathieuMorlighem
Running as SYSTEM
Building remotely on Debian_12-VM (debian linux) in workspace /home/jenkins/workspace/Debian_Linux-Ice-Ocean
The recommended git tool is: NONE
using credential 3c85c82b-fb35-4fea-b703-0aa4f155f9c7
 > git rev-parse --resolve-git-dir /home/jenkins/workspace/Debian_Linux-Ice-Ocean/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10
Fetching upstream changes from git@github.com:ISSMteam/ISSM.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins
Verifying host key using known hosts file
 > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/main^{commit} # timeout=10
Checking out Revision c88b7a0036f0fd7b172f845052b9a4d01fc3eba8 (refs/remotes/origin/main)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f c88b7a0036f0fd7b172f845052b9a4d01fc3eba8 # timeout=10
Commit message: "CHG: added check to tell useers they cannot use both PETSc and CoDiPack"
 > git rev-list --no-walk 3a68cbfc647fd6680b6931b32abc69bf77dafa94 # timeout=10
[Debian_Linux-Ice-Ocean] $ /bin/bash /tmp/jenkins11022179921244408136.sh
Cleaning up execution directory
======================================================
             Determining installation type            
======================================================
   
List of changed files
---------------------
m4/issm_options.m4
   
-- checking for changed externalpackages... no
-- checking for reconfiguration... yes
-- checking for recompilation... yes
======================================================
       Skipping autotools                          
======================================================
======================================================
       Skipping cmake                          
======================================================
======================================================
       Skipping petsc                          
======================================================
======================================================
       Skipping triangle                          
======================================================
======================================================
       Skipping m1qn3                          
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======================================================
       Skipping semic                          
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======================================================
       Skipping shell2junit                          
======================================================
======================================================
             Cleaning up and reconfiguring            
======================================================
CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config/missing aclocal-1.16 -I m4
 cd . && /bin/bash /home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config/missing automake-1.16 --foreign
CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config/missing autoconf
/bin/bash ./config.status --recheck
running CONFIG_SHELL=/bin/bash /bin/bash ./configure --prefix=/home/jenkins/workspace/Debian_Linux-Ice-Ocean --disable-static --enable-development --enable-debugging --with-ocean --with-numthreads=4 --with-matlab-dir=/usr/local/MATLAB/R2023b --with-fortran-lib=-L/usr/lib/x86_64-linux-gnu -lgfortran --with-mpi-include=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include --with-mpi-libflags=-L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort --with-blas-lapack-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-metis-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-parmetis-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-scalapack-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-mumps-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-petsc-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-triangle-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/triangle/install --with-m1qn3-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/m1qn3/install --with-semic-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/semic/install --no-create --no-recursion
configure: ============================================================================
configure: =      Ice-sheet and Sea-level System Model (ISSM) 4.24 configuration      =
configure: ============================================================================
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking target system type... x86_64-pc-linux-gnu
checking for icc... no
checking for cl... no
checking for icl... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking how to run the C preprocessor... gcc -E
checking for icpc... no
checking for cl... no
checking for icl... no
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for ifort... no
checking for g77... no
checking for gfortran... gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
checking for ifort... no
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking dependency style of gcc... gcc3
checking dependency style of g++... gcc3
checking whether make supports nested variables... (cached) yes
checking for ar... ar
checking the archiver (ar) interface... ar
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
configure: ============================================================================
configure: =                      Checking ISSM specific options                      =
configure: ============================================================================
checking for date... /usr/bin/date
checking for build date... Mon Jul 29 03:37:28 PDT 2024
checking user name... jenkins
checking host full OS name and version... linux
checking host cpu... x86_64
checking vendor... pc
checking host OS name... linux
checking host OS version... 6.1.0-21-amd64
checking host OS architecture... x86_64
checking for debugging support... yes
checking for development support... yes
checking for standalone modules build... no
checking for standalone executables build... no
checking for standalone libraries build... no
checking for wrappers compilation... yes
checking operating system type... Linux
checking for MATLAB... yes
checking MATLAB's mex compilation flags... done
checking for JavaScript... no
checking for triangle... yes
checking for Boost... no
checking for Dakota... no
checking for Python... no
checking for python-numpy... no
checking for Chaco... no
checking for ESMF... no
checking for CoDiPack... no
checking for tape allocation... no
checking for ADOL-C... no
checking for ADOL-C version... 2
checking for ATLAS and CBLAS libraries... no
checking for GSL... no
checking for AMPI... no
checking for Adjoint MPI... no
checking for MeDiPack... no
checking for HDF5 libraries... no
checking for PETSc... yes
checking for PETSc version... 3.20
checking whether PETSc is the development version... no
checking for PETSc libraries and header files in /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install... done
checking for MPI... yes
checking for SCOTCH... no
checking for METIS... yes
checking for ParMETIS... yes
checking for TAO... yes
checking for M1QN3... yes
checking for PROJ... no
checking for shapelib... no
checking for ScaLAPACK... yes
checking for BLAS/LAPACK... yes
checking for MKL... no
checking for PlaLAPACK... no
checking for MPLAPACK... no
checking for MUMPS... yes
checking for BLACS... no
checking for HYPRE... no
checking for Prometheus... no
checking for SEMIC... yes
checking for SPAI... no
checking for SuperLU... no
checking for SPOOLES... no
checking for PaStiX... no
checking for ml... no
checking for UMFPACK... no
checking for libm... done
checking for MATH77... no
checking for Fortran compilation... yes
checking for Fortran library... done
checking for MeteoIO... no
checking for SNOWPACK... no
checking for NeoPZ... no
checking for Gmsh... no
checking for BAMG capability compilation... yes
checking for ice/ocean coupling capability compilation... yes
checking for kml capability compilation... no
checking for kriging capability compilation... yes
checking for HydrologyTws capability compilation... yes
checking for AdjointBalancethickness2 capability compilation... yes
checking for AdjointBalancethickness capability compilation... yes
checking for AdjointHoriz capability compilation... yes
checking for Age capability compilation... yes
checking for Balancethickness2 capability compilation... yes
checking for Balancethickness capability compilation... yes
checking for BalancethicknessSoft capability compilation... yes
checking for Balancevelocity capability compilation... yes
checking for DamageEvolution capability compilation... yes
checking for Debris capability compilation... yes
checking for DepthAverage capability compilation... yes
checking for Enthalpy capability compilation... yes
checking for Esa capability compilation... yes
checking for Extrapolation capability compilation... yes
checking for ExtrudeFromBase capability compilation... yes
checking for ExtrudeFromTop capability compilation... yes
checking for FreeSurfaceBase capability compilation... yes
checking for FreeSurfaceTop capability compilation... yes
checking for GLheightadvection capability compilation... yes
checking for HydrologyDCEfficient capability compilation... yes
checking for HydrologyDCInefficient capability compilation... yes
checking for HydrologyGlaDS capability compilation... yes
checking for HydrologyPism capability compilation... yes
checking for HydrologyShakti capability compilation... yes
checking for HydrologyShreve capability compilation... yes
checking for HydrologyArmapw capability compilation... yes
checking for L2ProjectionBase capability compilation... yes
checking for L2ProjectionEPL capability compilation... yes
checking for Levelset capability compilation... yes
checking for Love capability compilation... yes
checking for Masstransport capability compilation... yes
checking for Melting capability compilation... yes
checking for Oceantransport capability compilation... yes
checking for Recovery capability compilation... yes
checking for Sampling capability compilation... yes
checking for Sealevelchange capability compilation... yes
checking for Smb capability compilation... yes
checking for Smooth capability compilation... yes
checking for Stressbalance capability compilation... yes
checking for StressbalanceSIA capability compilation... yes
checking for StressbalanceVertical capability compilation... yes
checking for Thermal capability compilation... yes
checking for UzawaPressure capability compilation... yes
checking for number of threads... 4
checking for 64-bit indices... 0
checking consistency between all external packages... done
checking that generated files are newer than configure... done
configure: creating ./config.status
 /bin/bash ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/c/Makefile
config.status: creating src/wrappers/Makefile
config.status: creating src/wrappers/python/Makefile
config.status: creating src/wrappers/matlab/Makefile
config.status: creating src/wrappers/javascript/Makefile
config.status: creating src/m/Makefile
config.status: creating ./config.h
config.status: executing depfiles commands
config.status: executing libtool commands
Making uninstall in src
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
Making uninstall in c
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
 ( cd '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin' && rm -f issm.exe issm_slc.exe issm_ocean.exe kriging.exe )
 /bin/bash ../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so
 /bin/bash ../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so
 /bin/bash ../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
Making uninstall in m
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
Making uninstall in wrappers
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
Making uninstall in matlab
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.so
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[3]: Nothing to be done for 'uninstall-am'.
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[2]: Nothing to be done for 'uninstall-am'.
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
make[1]: Nothing to be done for 'uninstall-am'.
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
Making distclean in src
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
Making distclean in c
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
 rm -f issm.exe issm_slc.exe issm_ocean.exe kriging.exe
 rm -f issm issm_slc issm_ocean kriging
test -z "libISSMCore.la libISSMOverload.la libISSMModules.la" || rm -f libISSMCore.la libISSMOverload.la libISSMModules.la
rm -f ./so_locations
rm -rf .libs _libs
rm -rf ./analyses/.libs ./analyses/_libs
rm -rf ./bamg/.libs ./bamg/_libs
rm -rf ./classes/.libs ./classes/_libs
rm -rf ./classes/Constraints/.libs ./classes/Constraints/_libs
rm -rf ./classes/Dakota/.libs ./classes/Dakota/_libs
rm -rf ./classes/Elements/.libs ./classes/Elements/_libs
rm -rf ./classes/ExternalResults/.libs ./classes/ExternalResults/_libs
rm -rf ./classes/Inputs/.libs ./classes/Inputs/_libs
rm -rf ./classes/Loads/.libs ./classes/Loads/_libs
rm -rf ./classes/Materials/.libs ./classes/Materials/_libs
rm -rf ./classes/Options/.libs ./classes/Options/_libs
rm -rf ./classes/Params/.libs ./classes/Params/_libs
rm -rf ./classes/gauss/.libs ./classes/gauss/_libs
rm -rf ./classes/kriging/.libs ./classes/kriging/_libs
rm -rf ./classes/matrix/.libs ./classes/matrix/_libs
rm -rf ./cores/.libs ./cores/_libs
rm -rf ./datastructures/.libs ./datastructures/_libs
rm -rf ./kml/.libs ./kml/_libs
rm -rf ./main/.libs ./main/_libs
rm -rf ./modules/AllocateSystemMatricesx/.libs ./modules/AllocateSystemMatricesx/_libs
rm -rf ./modules/AverageOntoPartitionx/.libs ./modules/AverageOntoPartitionx/_libs
rm -rf ./modules/BamgConvertMeshx/.libs ./modules/BamgConvertMeshx/_libs
rm -rf ./modules/BamgTriangulatex/.libs ./modules/BamgTriangulatex/_libs
rm -rf ./modules/Bamgx/.libs ./modules/Bamgx/_libs
rm -rf ./modules/Calvingx/.libs ./modules/Calvingx/_libs
rm -rf ./modules/Chacox/.libs ./modules/Chacox/_libs
rm -rf ./modules/ConfigureObjectsx/.libs ./modules/ConfigureObjectsx/_libs
rm -rf ./modules/ConstraintsStatex/.libs ./modules/ConstraintsStatex/_libs
rm -rf ./modules/ContourToMeshx/.libs ./modules/ContourToMeshx/_libs
rm -rf ./modules/ContourToNodesx/.libs ./modules/ContourToNodesx/_libs
rm -rf ./modules/ControlInputSetGradientx/.libs ./modules/ControlInputSetGradientx/_libs
rm -rf ./modules/CoordinateSystemTransformx/.libs ./modules/CoordinateSystemTransformx/_libs
rm -rf ./modules/CreateJacobianMatrixx/.libs ./modules/CreateJacobianMatrixx/_libs
rm -rf ./modules/CreateNodalConstraintsx/.libs ./modules/CreateNodalConstraintsx/_libs
rm -rf ./modules/Damagex/.libs ./modules/Damagex/_libs
rm -rf ./modules/DistanceToMaskBoundaryx/.libs ./modules/DistanceToMaskBoundaryx/_libs
rm -rf ./modules/DragCoefficientAbsGradientx/.libs ./modules/DragCoefficientAbsGradientx/_libs
rm -rf ./modules/ElementConnectivityx/.libs ./modules/ElementConnectivityx/_libs
rm -rf ./modules/ElementCoordinatesx/.libs ./modules/ElementCoordinatesx/_libs
rm -rf ./modules/Exp2Kmlx/.libs ./modules/Exp2Kmlx/_libs
rm -rf ./modules/ExpToLevelSetx/.libs ./modules/ExpToLevelSetx/_libs
rm -rf ./modules/FloatingiceMeltingRatePicox/.libs ./modules/FloatingiceMeltingRatePicox/_libs
rm -rf ./modules/FloatingiceMeltingRatex/.libs ./modules/FloatingiceMeltingRatex/_libs
rm -rf ./modules/FrontalForcingsx/.libs ./modules/FrontalForcingsx/_libs
rm -rf ./modules/GeothermalFluxx/.libs ./modules/GeothermalFluxx/_libs
rm -rf ./modules/GetSolutionFromInputsx/.libs ./modules/GetSolutionFromInputsx/_libs
rm -rf ./modules/GetVectorFromControlInputsx/.libs ./modules/GetVectorFromControlInputsx/_libs
rm -rf ./modules/GetVectorFromInputsx/.libs ./modules/GetVectorFromInputsx/_libs
rm -rf ./modules/GiaDeflectionCorex/.libs ./modules/GiaDeflectionCorex/_libs
rm -rf ./modules/Gradjx/.libs ./modules/Gradjx/_libs
rm -rf ./modules/GroundinglineMigrationx/.libs ./modules/GroundinglineMigrationx/_libs
rm -rf ./modules/InputDepthAverageAtBasex/.libs ./modules/InputDepthAverageAtBasex/_libs
rm -rf ./modules/InputDuplicatex/.libs ./modules/InputDuplicatex/_libs
rm -rf ./modules/InputExtrudex/.libs ./modules/InputExtrudex/_libs
rm -rf ./modules/InputUpdateFromConstantx/.libs ./modules/InputUpdateFromConstantx/_libs
rm -rf ./modules/InputUpdateFromDakotax/.libs ./modules/InputUpdateFromDakotax/_libs
rm -rf ./modules/InputUpdateFromMatrixDakotax/.libs ./modules/InputUpdateFromMatrixDakotax/_libs
rm -rf ./modules/InputUpdateFromSolutionx/.libs ./modules/InputUpdateFromSolutionx/_libs
rm -rf ./modules/InputUpdateFromVectorDakotax/.libs ./modules/InputUpdateFromVectorDakotax/_libs
rm -rf ./modules/InputUpdateFromVectorx/.libs ./modules/InputUpdateFromVectorx/_libs
rm -rf ./modules/InterpFromGridToMeshx/.libs ./modules/InterpFromGridToMeshx/_libs
rm -rf ./modules/InterpFromMesh2dx/.libs ./modules/InterpFromMesh2dx/_libs
rm -rf ./modules/InterpFromMeshToGridx/.libs ./modules/InterpFromMeshToGridx/_libs
rm -rf ./modules/InterpFromMeshToMesh2dx/.libs ./modules/InterpFromMeshToMesh2dx/_libs
rm -rf ./modules/InterpFromMeshToMesh3dx/.libs ./modules/InterpFromMeshToMesh3dx/_libs
rm -rf ./modules/IoModelToConstraintsx/.libs ./modules/IoModelToConstraintsx/_libs
rm -rf ./modules/KMLFileReadx/.libs ./modules/KMLFileReadx/_libs
rm -rf ./modules/KMLMeshWritex/.libs ./modules/KMLMeshWritex/_libs
rm -rf ./modules/KMLOverlayx/.libs ./modules/KMLOverlayx/_libs
rm -rf ./modules/KillIcebergsx/.libs ./modules/KillIcebergsx/_libs
rm -rf ./modules/Kml2Expx/.libs ./modules/Kml2Expx/_libs
rm -rf ./modules/Krigingx/.libs ./modules/Krigingx/_libs
rm -rf ./modules/Mergesolutionfromftogx/.libs ./modules/Mergesolutionfromftogx/_libs
rm -rf ./modules/MeshPartitionx/.libs ./modules/MeshPartitionx/_libs
rm -rf ./modules/MeshProfileIntersectionx/.libs ./modules/MeshProfileIntersectionx/_libs
rm -rf ./modules/MmeToInputFromIdx/.libs ./modules/MmeToInputFromIdx/_libs
rm -rf ./modules/ModelProcessorx/.libs ./modules/ModelProcessorx/_libs
rm -rf ./modules/ModelProcessorx/Autodiff/.libs ./modules/ModelProcessorx/Autodiff/_libs
rm -rf ./modules/ModelProcessorx/Control/.libs ./modules/ModelProcessorx/Control/_libs
rm -rf ./modules/ModelProcessorx/Dakota/.libs ./modules/ModelProcessorx/Dakota/_libs
rm -rf ./modules/ModelProcessorx/Transient/.libs ./modules/ModelProcessorx/Transient/_libs
rm -rf ./modules/NodalValuex/.libs ./modules/NodalValuex/_libs
rm -rf ./modules/NodeConnectivityx/.libs ./modules/NodeConnectivityx/_libs
rm -rf ./modules/NodesDofx/.libs ./modules/NodesDofx/_libs
rm -rf ./modules/OceanExchangeDatax/.libs ./modules/OceanExchangeDatax/_libs
rm -rf ./modules/OutputDefinitionsResponsex/.libs ./modules/OutputDefinitionsResponsex/_libs
rm -rf ./modules/OutputResultsx/.libs ./modules/OutputResultsx/_libs
rm -rf ./modules/ParseToolkitsOptionsx/.libs ./modules/ParseToolkitsOptionsx/_libs
rm -rf ./modules/PointCloudFindNeighborsx/.libs ./modules/PointCloudFindNeighborsx/_libs
rm -rf ./modules/ProcessRiftsx/.libs ./modules/ProcessRiftsx/_libs
rm -rf ./modules/PropagateFlagsFromConnectivityx/.libs ./modules/PropagateFlagsFromConnectivityx/_libs
rm -rf ./modules/QmuStatisticsx/.libs ./modules/QmuStatisticsx/_libs
rm -rf ./modules/Reduceloadx/.libs ./modules/Reduceloadx/_libs
rm -rf ./modules/Reducevectorgtofx/.libs ./modules/Reducevectorgtofx/_libs
rm -rf ./modules/ResetConstraintsx/.libs ./modules/ResetConstraintsx/_libs
rm -rf ./modules/ResetFSBasalBoundaryConditionx/.libs ./modules/ResetFSBasalBoundaryConditionx/_libs
rm -rf ./modules/RheologyBAbsGradientx/.libs ./modules/RheologyBAbsGradientx/_libs
rm -rf ./modules/RheologyBbarAbsGradientx/.libs ./modules/RheologyBbarAbsGradientx/_libs
rm -rf ./modules/Scotchx/.libs ./modules/Scotchx/_libs
rm -rf ./modules/SetActiveNodesLSMx/.libs ./modules/SetActiveNodesLSMx/_libs
rm -rf ./modules/SetControlInputsFromVectorx/.libs ./modules/SetControlInputsFromVectorx/_libs
rm -rf ./modules/Shp2Kmlx/.libs ./modules/Shp2Kmlx/_libs
rm -rf ./modules/Solverx/.libs ./modules/Solverx/_libs
rm -rf ./modules/SpcNodesx/.libs ./modules/SpcNodesx/_libs
rm -rf ./modules/StochasticForcingx/.libs ./modules/StochasticForcingx/_libs
rm -rf ./modules/SurfaceAbsVelMisfitx/.libs ./modules/SurfaceAbsVelMisfitx/_libs
rm -rf ./modules/SurfaceAreax/.libs ./modules/SurfaceAreax/_libs
rm -rf ./modules/SurfaceAverageVelMisfitx/.libs ./modules/SurfaceAverageVelMisfitx/_libs
rm -rf ./modules/SurfaceLogVelMisfitx/.libs ./modules/SurfaceLogVelMisfitx/_libs
rm -rf ./modules/SurfaceLogVxVyMisfitx/.libs ./modules/SurfaceLogVxVyMisfitx/_libs
rm -rf ./modules/SurfaceMassBalancex/.libs ./modules/SurfaceMassBalancex/_libs
rm -rf ./modules/SurfaceRelVelMisfitx/.libs ./modules/SurfaceRelVelMisfitx/_libs
rm -rf ./modules/SystemMatricesx/.libs ./modules/SystemMatricesx/_libs
rm -rf ./modules/ThicknessAbsMisfitx/.libs ./modules/ThicknessAbsMisfitx/_libs
rm -rf ./modules/ThicknessAcrossGradientx/.libs ./modules/ThicknessAcrossGradientx/_libs
rm -rf ./modules/ThicknessAlongGradientx/.libs ./modules/ThicknessAlongGradientx/_libs
rm -rf ./modules/Trianglex/.libs ./modules/Trianglex/_libs
rm -rf ./modules/UpdateDynamicConstraintsx/.libs ./modules/UpdateDynamicConstraintsx/_libs
rm -rf ./modules/VertexCoordinatesx/.libs ./modules/VertexCoordinatesx/_libs
rm -rf ./shared/Bamg/.libs ./shared/Bamg/_libs
rm -rf ./shared/Elements/.libs ./shared/Elements/_libs
rm -rf ./shared/Enum/.libs ./shared/Enum/_libs
rm -rf ./shared/Exceptions/.libs ./shared/Exceptions/_libs
rm -rf ./shared/Exp/.libs ./shared/Exp/_libs
rm -rf ./shared/FSanalyticals/.libs ./shared/FSanalyticals/_libs
rm -rf ./shared/LatLong/.libs ./shared/LatLong/_libs
rm -rf ./shared/Matrix/.libs ./shared/Matrix/_libs
rm -rf ./shared/MemOps/.libs ./shared/MemOps/_libs
rm -rf ./shared/Numerics/.libs ./shared/Numerics/_libs
rm -rf ./shared/Random/.libs ./shared/Random/_libs
rm -rf ./shared/Sorting/.libs ./shared/Sorting/_libs
rm -rf ./shared/String/.libs ./shared/String/_libs
rm -rf ./shared/Threads/.libs ./shared/Threads/_libs
rm -rf ./shared/Triangle/.libs ./shared/Triangle/_libs
rm -rf ./shared/io/Comm/.libs ./shared/io/Comm/_libs
rm -rf ./shared/io/Disk/.libs ./shared/io/Disk/_libs
rm -rf ./shared/io/Marshalling/.libs ./shared/io/Marshalling/_libs
rm -rf ./shared/io/Print/.libs ./shared/io/Print/_libs
rm -rf ./solutionsequences/.libs ./solutionsequences/_libs
rm -rf ./toolkits/.libs ./toolkits/_libs
rm -rf ./toolkits/codipack/.libs ./toolkits/codipack/_libs
rm -rf ./toolkits/gsl/.libs ./toolkits/gsl/_libs
rm -rf ./toolkits/issm/.libs ./toolkits/issm/_libs
rm -rf ./toolkits/metis/patches/.libs ./toolkits/metis/patches/_libs
rm -rf ./toolkits/mpi/.libs ./toolkits/mpi/_libs
rm -rf ./toolkits/mpi/commops/.libs ./toolkits/mpi/commops/_libs
rm -rf ./toolkits/mumps/.libs ./toolkits/mumps/_libs
rm -rf ./toolkits/petsc/objects/.libs ./toolkits/petsc/objects/_libs
rm -rf ./toolkits/petsc/patches/.libs ./toolkits/petsc/patches/_libs
rm -f *.o
rm -f ./analyses/*.o
rm -f ./analyses/*.lo
rm -f ./bamg/*.o
rm -f ./bamg/*.lo
rm -f ./classes/*.o
rm -f ./classes/*.lo
rm -f ./classes/Constraints/*.o
rm -f ./classes/Constraints/*.lo
rm -f ./classes/Dakota/*.o
rm -f ./classes/Dakota/*.lo
rm -f ./classes/Elements/*.o
rm -f ./classes/Elements/*.lo
rm -f ./classes/ExternalResults/*.o
rm -f ./classes/ExternalResults/*.lo
rm -f ./classes/Inputs/*.o
rm -f ./classes/Inputs/*.lo
rm -f ./classes/Loads/*.o
rm -f ./classes/Loads/*.lo
rm -f ./classes/Materials/*.o
rm -f ./classes/Materials/*.lo
rm -f ./classes/Options/*.o
rm -f ./classes/Options/*.lo
rm -f ./classes/Params/*.o
rm -f ./classes/Params/*.lo
rm -f ./classes/gauss/*.o
rm -f ./classes/gauss/*.lo
rm -f ./classes/kriging/*.o
rm -f ./classes/kriging/*.lo
rm -f ./classes/matrix/*.o
rm -f ./classes/matrix/*.lo
rm -f ./cores/*.o
rm -f ./cores/*.lo
rm -f ./datastructures/*.o
rm -f ./datastructures/*.lo
rm -f ./kml/*.o
rm -f ./kml/*.lo
rm -f ./main/*.o
rm -f ./main/*.lo
rm -f ./modules/AllocateSystemMatricesx/*.o
rm -f ./modules/AllocateSystemMatricesx/*.lo
rm -f ./modules/AverageOntoPartitionx/*.o
rm -f ./modules/AverageOntoPartitionx/*.lo
rm -f ./modules/BamgConvertMeshx/*.o
rm -f ./modules/BamgConvertMeshx/*.lo
rm -f ./modules/BamgTriangulatex/*.o
rm -f ./modules/BamgTriangulatex/*.lo
rm -f ./modules/Bamgx/*.o
rm -f ./modules/Bamgx/*.lo
rm -f ./modules/Calvingx/*.o
rm -f ./modules/Calvingx/*.lo
rm -f ./modules/Chacox/*.o
rm -f ./modules/Chacox/*.lo
rm -f ./modules/ConfigureObjectsx/*.o
rm -f ./modules/ConfigureObjectsx/*.lo
rm -f ./modules/ConstraintsStatex/*.o
rm -f ./modules/ConstraintsStatex/*.lo
rm -f ./modules/ContourToMeshx/*.o
rm -f ./modules/ContourToMeshx/*.lo
rm -f ./modules/ContourToNodesx/*.o
rm -f ./modules/ContourToNodesx/*.lo
rm -f ./modules/ControlInputSetGradientx/*.o
rm -f ./modules/ControlInputSetGradientx/*.lo
rm -f ./modules/CoordinateSystemTransformx/*.o
rm -f ./modules/CoordinateSystemTransformx/*.lo
rm -f ./modules/CreateJacobianMatrixx/*.o
rm -f ./modules/CreateJacobianMatrixx/*.lo
rm -f ./modules/CreateNodalConstraintsx/*.o
rm -f ./modules/CreateNodalConstraintsx/*.lo
rm -f ./modules/Damagex/*.o
rm -f ./modules/Damagex/*.lo
rm -f ./modules/DistanceToMaskBoundaryx/*.o
rm -f ./modules/DistanceToMaskBoundaryx/*.lo
rm -f ./modules/DragCoefficientAbsGradientx/*.o
rm -f ./modules/DragCoefficientAbsGradientx/*.lo
rm -f ./modules/ElementConnectivityx/*.o
rm -f ./modules/ElementConnectivityx/*.lo
rm -f ./modules/ElementCoordinatesx/*.o
rm -f ./modules/ElementCoordinatesx/*.lo
rm -f ./modules/Exp2Kmlx/*.o
rm -f ./modules/Exp2Kmlx/*.lo
rm -f ./modules/ExpToLevelSetx/*.o
rm -f ./modules/ExpToLevelSetx/*.lo
rm -f ./modules/FloatingiceMeltingRatePicox/*.o
rm -f ./modules/FloatingiceMeltingRatePicox/*.lo
rm -f ./modules/FloatingiceMeltingRatex/*.o
rm -f ./modules/FloatingiceMeltingRatex/*.lo
rm -f ./modules/FrontalForcingsx/*.o
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rm -f ./modules/InputUpdateFromMatrixDakotax/.deps/libISSMCore_la-InputUpdateFromMatrixDakotax.Plo
rm -f ./modules/InputUpdateFromSolutionx/.deps/libISSMCore_la-InputUpdateFromSolutionx.Plo
rm -f ./modules/InputUpdateFromVectorDakotax/.deps/libISSMCore_la-InputUpdateFromVectorDakotax.Plo
rm -f ./modules/InputUpdateFromVectorx/.deps/libISSMCore_la-InputUpdateFromVectorx.Plo
rm -f ./modules/InterpFromGridToMeshx/.deps/libISSMModules_la-InterpFromGridToMeshx.Plo
rm -f ./modules/InterpFromMesh2dx/.deps/libISSMModules_la-InterpFromMesh2dx.Plo
rm -f ./modules/InterpFromMesh2dx/.deps/libISSMModules_la-InterpFromMesh2dxt.Plo
rm -f ./modules/InterpFromMeshToGridx/.deps/libISSMModules_la-InterpFromMeshToGridx.Plo
rm -f ./modules/InterpFromMeshToMesh2dx/.deps/libISSMCore_la-InterpFromMeshToMesh2dx.Plo
rm -f ./modules/InterpFromMeshToMesh3dx/.deps/libISSMModules_la-InterpFromMeshToMesh3dx.Plo
rm -f ./modules/IoModelToConstraintsx/.deps/libISSMCore_la-IoModelToConstraintsx.Plo
rm -f ./modules/KMLFileReadx/.deps/libISSMModules_la-KMLFileReadx.Plo
rm -f ./modules/KMLMeshWritex/.deps/libISSMModules_la-KMLMeshWritex.Plo
rm -f ./modules/KMLOverlayx/.deps/libISSMModules_la-KMLOverlayx.Plo
rm -f ./modules/KillIcebergsx/.deps/libISSMCore_la-KillIcebergsx.Plo
rm -f ./modules/Kml2Expx/.deps/libISSMModules_la-Kml2Expx.Plo
rm -f ./modules/Krigingx/.deps/libISSMCore_la-pKrigingx.Plo
rm -f ./modules/Krigingx/.deps/libISSMModules_la-Krigingx.Plo
rm -f ./modules/Krigingx/.deps/libISSMModules_la-pKrigingx.Plo
rm -f ./modules/Mergesolutionfromftogx/.deps/libISSMCore_la-Mergesolutionfromftogx.Plo
rm -f ./modules/MeshPartitionx/.deps/libISSMCore_la-MeshPartitionx.Plo
rm -f ./modules/MeshProfileIntersectionx/.deps/libISSMModules_la-MeshProfileIntersectionx.Plo
rm -f ./modules/MmeToInputFromIdx/.deps/libISSMCore_la-MmeToInputFromIdx.Plo
rm -f ./modules/ModelProcessorx/.deps/libISSMCore_la-CreateEdges.Plo
rm -f ./modules/ModelProcessorx/.deps/libISSMCore_la-CreateElementsVerticesAndMaterials.Plo
rm -f ./modules/ModelProcessorx/.deps/libISSMCore_la-CreateFaces.Plo
rm -f ./modules/ModelProcessorx/.deps/libISSMCore_la-CreateNodes.Plo
rm -f ./modules/ModelProcessorx/.deps/libISSMCore_la-CreateNumberNodeToElementConnectivity.Plo
rm -f ./modules/ModelProcessorx/.deps/libISSMCore_la-CreateOutputDefinitions.Plo
rm -f ./modules/ModelProcessorx/.deps/libISSMCore_la-CreateParameters.Plo
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rm -f ./modules/ModelProcessorx/.deps/libISSMCore_la-FacesPartitioning.Plo
rm -f ./modules/ModelProcessorx/.deps/libISSMCore_la-ModelProcessorx.Plo
rm -f ./modules/ModelProcessorx/.deps/libISSMCore_la-NodesPartitioning.Plo
rm -f ./modules/ModelProcessorx/Autodiff/.deps/libISSMCore_la-CreateParametersAutodiff.Plo
rm -f ./modules/ModelProcessorx/Control/.deps/libISSMCore_la-CreateParametersControl.Plo
rm -f ./modules/ModelProcessorx/Control/.deps/libISSMCore_la-UpdateElementsAndMaterialsControl.Plo
rm -f ./modules/ModelProcessorx/Dakota/.deps/libISSMCore_la-CreateParametersDakota.Plo
rm -f ./modules/ModelProcessorx/Dakota/.deps/libISSMCore_la-UpdateElementsAndMaterialsDakota.Plo
rm -f ./modules/ModelProcessorx/Transient/.deps/libISSMCore_la-UpdateElementsTransient.Plo
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rm -f ./modules/NodalValuex/.deps/libISSMCore_la-NodalValuex.Plo
rm -f ./modules/NodeConnectivityx/.deps/libISSMModules_la-NodeConnectivityx.Plo
rm -f ./modules/NodesDofx/.deps/libISSMCore_la-NodesDofx.Plo
rm -f ./modules/OceanExchangeDatax/.deps/libISSMCore_la-OceanExchangeDatax.Plo
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rm -f ./modules/OutputResultsx/.deps/libISSMCore_la-OutputResultsx.Plo
rm -f ./modules/ParseToolkitsOptionsx/.deps/libISSMCore_la-ParseToolkitsOptionsx.Plo
rm -f ./modules/PointCloudFindNeighborsx/.deps/libISSMModules_la-PointCloudFindNeighborsx.Plo
rm -f ./modules/PointCloudFindNeighborsx/.deps/libISSMModules_la-PointCloudFindNeighborsxt.Plo
rm -f ./modules/ProcessRiftsx/.deps/libISSMModules_la-ProcessRiftsx.Plo
rm -f ./modules/PropagateFlagsFromConnectivityx/.deps/libISSMModules_la-PropagateFlagsFromConnectivityx.Plo
rm -f ./modules/QmuStatisticsx/.deps/libISSMCore_la-QmuStatisticsx.Plo
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rm -f ./modules/RheologyBAbsGradientx/.deps/libISSMCore_la-RheologyBAbsGradientx.Plo
rm -f ./modules/RheologyBbarAbsGradientx/.deps/libISSMCore_la-RheologyBbarAbsGradientx.Plo
rm -f ./modules/Scotchx/.deps/libISSMModules_la-Scotchx.Plo
rm -f ./modules/SetActiveNodesLSMx/.deps/libISSMCore_la-SetActiveNodesLSMx.Plo
rm -f ./modules/SetControlInputsFromVectorx/.deps/libISSMCore_la-SetControlInputsFromVectorx.Plo
rm -f ./modules/Shp2Kmlx/.deps/libISSMModules_la-Shp2Kmlx.Plo
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rm -f ./modules/SpcNodesx/.deps/libISSMCore_la-SpcNodesx.Plo
rm -f ./modules/StochasticForcingx/.deps/libISSMCore_la-StochasticForcingx.Plo
rm -f ./modules/SurfaceAbsVelMisfitx/.deps/libISSMCore_la-SurfaceAbsVelMisfitx.Plo
rm -f ./modules/SurfaceAreax/.deps/libISSMCore_la-SurfaceAreax.Plo
rm -f ./modules/SurfaceAverageVelMisfitx/.deps/libISSMCore_la-SurfaceAverageVelMisfitx.Plo
rm -f ./modules/SurfaceLogVelMisfitx/.deps/libISSMCore_la-SurfaceLogVelMisfitx.Plo
rm -f ./modules/SurfaceLogVxVyMisfitx/.deps/libISSMCore_la-SurfaceLogVxVyMisfitx.Plo
rm -f ./modules/SurfaceMassBalancex/.deps/libISSMCore_la-Gembx.Plo
rm -f ./modules/SurfaceMassBalancex/.deps/libISSMCore_la-SurfaceMassBalancex.Plo
rm -f ./modules/SurfaceRelVelMisfitx/.deps/libISSMCore_la-SurfaceRelVelMisfitx.Plo
rm -f ./modules/SystemMatricesx/.deps/libISSMCore_la-SystemMatricesx.Plo
rm -f ./modules/ThicknessAbsMisfitx/.deps/libISSMCore_la-ThicknessAbsMisfitx.Plo
rm -f ./modules/ThicknessAcrossGradientx/.deps/libISSMCore_la-ThicknessAcrossGradientx.Plo
rm -f ./modules/ThicknessAlongGradientx/.deps/libISSMCore_la-ThicknessAlongGradientx.Plo
rm -f ./modules/Trianglex/.deps/libISSMModules_la-Trianglex.Plo
rm -f ./modules/UpdateDynamicConstraintsx/.deps/libISSMCore_la-UpdateDynamicConstraintsx.Plo
rm -f ./modules/VertexCoordinatesx/.deps/libISSMCore_la-VertexCoordinatesx.Plo
rm -f ./shared/Bamg/.deps/libISSMCore_la-BigPrimeNumber.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-Arrhenius.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-BuddJacka.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-ComputeD18OTemperaturePrecipitationFromPD.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-ComputeDelta18oTemperaturePrecipitation.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-ComputeMungsmTemperaturePrecipitation.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-Cuffey.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-CuffeyTemperate.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-DrainageFunctionWaterfraction.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-EstarComponents.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-LliboutryDuval.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-NyeCO2.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-NyeH2O.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-Paterson.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-PddSurfaceMassBalance.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-PddSurfaceMassBalanceSicopolis.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-PrintArrays.Plo
rm -f ./shared/Elements/.deps/libISSMCore_la-StressIntensityIntegralWeight.Plo
rm -f ./shared/Enum/.deps/libISSMCore_la-EnumToStringx.Plo
rm -f ./shared/Enum/.deps/libISSMCore_la-StringToEnumx.Plo
rm -f ./shared/Exceptions/.deps/libISSMCore_la-Exceptions.Plo
rm -f ./shared/Exp/.deps/libISSMModules_la-exp.Plo
rm -f ./shared/FSanalyticals/.deps/libISSMCore_la-fsanalyticals.Plo
rm -f ./shared/LatLong/.deps/libISSMCore_la-Ll2xyx.Plo
rm -f ./shared/LatLong/.deps/libISSMCore_la-Xy2llx.Plo
rm -f ./shared/Matrix/.deps/libISSMCore_la-MatrixUtils.Plo
rm -f ./shared/MemOps/.deps/libISSMCore_la-MemOps.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-BrentSearch.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-GaussPoints.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-NewtonSolveDnorm.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-ODE1.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-Verbosity.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-XZvectorsToCoordinateSystem.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-cross.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-cubic.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-extrema.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-isnan.Plo
rm -f ./shared/Numerics/.deps/libISSMCore_la-legendre.Plo
rm -f ./shared/Random/.deps/libISSMCore_la-random.Plo
rm -f ./shared/Random/.deps/libISSMCore_la-randomgenerator.Plo
rm -f ./shared/Sorting/.deps/libISSMCore_la-binary_search.Plo
rm -f ./shared/String/.deps/ApiPrintf.Plo
rm -f ./shared/String/.deps/libISSMCore_la-DescriptorIndex.Plo
rm -f ./shared/Threads/.deps/libISSMModules_la-LaunchThread.Plo
rm -f ./shared/Threads/.deps/libISSMModules_la-PartitionRange.Plo
rm -f ./shared/Triangle/.deps/libISSMModules_la-AssociateSegmentToElement.Plo
rm -f ./shared/Triangle/.deps/libISSMModules_la-GridInsideHole.Plo
rm -f ./shared/Triangle/.deps/libISSMModules_la-OrderSegments.Plo
rm -f ./shared/Triangle/.deps/libISSMModules_la-SplitMeshForRifts.Plo
rm -f ./shared/Triangle/.deps/libISSMModules_la-TriangleUtils.Plo
rm -f ./shared/io/Comm/.deps/libISSMCore_la-IssmComm.Plo
rm -f ./shared/io/Disk/.deps/libISSMCore_la-WriteLockFile.Plo
rm -f ./shared/io/Disk/.deps/libISSMCore_la-pfclose.Plo
rm -f ./shared/io/Disk/.deps/libISSMCore_la-pfopen.Plo
rm -f ./shared/io/Marshalling/.deps/libISSMCore_la-IoCodeConversions.Plo
rm -f ./shared/io/Marshalling/.deps/libISSMCore_la-Marshalling.Plo
rm -f ./shared/io/Print/.deps/libISSMCore_la-PrintfFunction.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-convergence.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_adjoint_linear.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_fct.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_glads_nonlinear.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_hydro_nonlinear.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_la.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_la_theta.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_linear.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_newton.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_nonlinear.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_sampling.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_schurcg.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_shakti_nonlinear.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_stokescoupling_nonlinear.Plo
rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_thermal_nonlinear.Plo
rm -f ./toolkits/.deps/libISSMCore_la-ToolkitOptions.Plo
rm -f ./toolkits/codipack/.deps/libISSMCore_la-CoDiPackGlobal.Plo
rm -f ./toolkits/codipack/.deps/libISSMCore_la-ampi_interface.Plo
rm -f ./toolkits/gsl/.deps/libISSMCore_la-DenseGslSolve.Plo
rm -f ./toolkits/issm/.deps/libISSMCore_la-IssmSolver.Plo
rm -f ./toolkits/issm/.deps/libISSMCore_la-IssmToolkitUtils.Plo
rm -f ./toolkits/metis/patches/.deps/libISSMCore_la-METIS_PartMeshNodalPatch.Plo
rm -f ./toolkits/mpi/.deps/libISSMCore_la-issmmpi.Plo
rm -f ./toolkits/mpi/commops/.deps/libISSMCore_la-DetermineGlobalSize.Plo
rm -f ./toolkits/mpi/commops/.deps/libISSMCore_la-DetermineLocalSize.Plo
rm -f ./toolkits/mpi/commops/.deps/libISSMCore_la-DetermineRowRankFromLocalSize.Plo
rm -f ./toolkits/mpi/commops/.deps/libISSMCore_la-GetOwnershipBoundariesFromRange.Plo
rm -f ./toolkits/mumps/.deps/libISSMCore_la-MumpsSolve.Plo
rm -f ./toolkits/petsc/objects/.deps/libISSMCore_la-PetscMat.Plo
rm -f ./toolkits/petsc/objects/.deps/libISSMCore_la-PetscSolver.Plo
rm -f ./toolkits/petsc/objects/.deps/libISSMCore_la-PetscVec.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-ISSMToPetscInsertMode.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-ISSMToPetscMatrixType.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-ISSMToPetscNormMode.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-KSPFree.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-MatFree.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-MatMultPatch.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-MatToMPISerial.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-NewMat.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-NewVec.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-PetscOptionsDetermineSolverType.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-VecFree.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-VecToMPISerial.Plo
rm -f main/.deps/issm-issm.Po
rm -f main/.deps/issm_dakota-issm_dakota.Po
rm -f main/.deps/issm_ocean-issm_ocean.Po
rm -f main/.deps/issm_post-issm_post.Po
rm -f main/.deps/issm_slc-issm_slc.Po
rm -f main/.deps/kriging-kriging.Po
rm -f Makefile
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
Making distclean in m
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
rm -rf .libs _libs
rm -f *.lo
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f Makefile
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
Making distclean in wrappers
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
Making distclean in matlab
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
test -z "libISSMMatlab.la libISSMApi.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la M1qn3_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la  Kriging_matlab.la  " || rm -f libISSMMatlab.la libISSMApi.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la M1qn3_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la  Kriging_matlab.la  
rm -f ./so_locations
rm -rf .libs _libs
rm -rf ../BamgConvertMesh/.libs ../BamgConvertMesh/_libs
rm -rf ../BamgMesher/.libs ../BamgMesher/_libs
rm -rf ../BamgTriangulate/.libs ../BamgTriangulate/_libs
rm -rf ../Chaco/.libs ../Chaco/_libs
rm -rf ../ContourToMesh/.libs ../ContourToMesh/_libs
rm -rf ../ContourToNodes/.libs ../ContourToNodes/_libs
rm -rf ../CoordTransform/.libs ../CoordTransform/_libs
rm -rf ../DistanceToMaskBoundary/.libs ../DistanceToMaskBoundary/_libs
rm -rf ../ElementConnectivity/.libs ../ElementConnectivity/_libs
rm -rf ../ExpSimplify/.libs ../ExpSimplify/_libs
rm -rf ../ExpToLevelSet/.libs ../ExpToLevelSet/_libs
rm -rf ../InterpFromGridToMesh/.libs ../InterpFromGridToMesh/_libs
rm -rf ../InterpFromMesh2d/.libs ../InterpFromMesh2d/_libs
rm -rf ../InterpFromMeshToGrid/.libs ../InterpFromMeshToGrid/_libs
rm -rf ../InterpFromMeshToMesh2d/.libs ../InterpFromMeshToMesh2d/_libs
rm -rf ../InterpFromMeshToMesh3d/.libs ../InterpFromMeshToMesh3d/_libs
rm -rf ../IssmConfig/.libs ../IssmConfig/_libs
rm -rf ../Kriging/.libs ../Kriging/_libs
rm -rf ../M1qn3/.libs ../M1qn3/_libs
rm -rf ../MeshPartition/.libs ../MeshPartition/_libs
rm -rf ../MeshProfileIntersection/.libs ../MeshProfileIntersection/_libs
rm -rf ../NodeConnectivity/.libs ../NodeConnectivity/_libs
rm -rf ../PointCloudFindNeighbors/.libs ../PointCloudFindNeighbors/_libs
rm -rf ../ProcessRifts/.libs ../ProcessRifts/_libs
rm -rf ../PropagateFlagsFromConnectivity/.libs ../PropagateFlagsFromConnectivity/_libs
rm -rf ../Scotch/.libs ../Scotch/_libs
rm -rf ../ShpRead/.libs ../ShpRead/_libs
rm -rf ../Triangle/.libs ../Triangle/_libs
rm -rf ./io/.libs ./io/_libs
rm -f *.o
rm -f ../BamgConvertMesh/*.o
rm -f ../BamgConvertMesh/*.lo
rm -f ../BamgMesher/*.o
rm -f ../BamgMesher/*.lo
rm -f ../BamgTriangulate/*.o
rm -f ../BamgTriangulate/*.lo
rm -f ../Chaco/*.o
rm -f ../Chaco/*.lo
rm -f ../ContourToMesh/*.o
rm -f ../ContourToMesh/*.lo
rm -f ../ContourToNodes/*.o
rm -f ../ContourToNodes/*.lo
rm -f ../CoordTransform/*.o
rm -f ../CoordTransform/*.lo
rm -f ../DistanceToMaskBoundary/*.o
rm -f ../DistanceToMaskBoundary/*.lo
rm -f ../ElementConnectivity/*.o
rm -f ../ElementConnectivity/*.lo
rm -f ../ExpSimplify/*.o
rm -f ../ExpSimplify/*.lo
rm -f ../ExpToLevelSet/*.o
rm -f ../ExpToLevelSet/*.lo
rm -f ../InterpFromGridToMesh/*.o
rm -f ../InterpFromGridToMesh/*.lo
rm -f ../InterpFromMesh2d/*.o
rm -f ../InterpFromMesh2d/*.lo
rm -f ../InterpFromMeshToGrid/*.o
rm -f ../InterpFromMeshToGrid/*.lo
rm -f ../InterpFromMeshToMesh2d/*.o
rm -f ../InterpFromMeshToMesh2d/*.lo
rm -f ../InterpFromMeshToMesh3d/*.o
rm -f ../InterpFromMeshToMesh3d/*.lo
rm -f ../IssmConfig/*.o
rm -f ../IssmConfig/*.lo
rm -f ../Kriging/*.o
rm -f ../Kriging/*.lo
rm -f ../M1qn3/*.o
rm -f ../M1qn3/*.lo
rm -f ../MeshPartition/*.o
rm -f ../MeshPartition/*.lo
rm -f ../MeshProfileIntersection/*.o
rm -f ../MeshProfileIntersection/*.lo
rm -f ../NodeConnectivity/*.o
rm -f ../NodeConnectivity/*.lo
rm -f ../PointCloudFindNeighbors/*.o
rm -f ../PointCloudFindNeighbors/*.lo
rm -f ../ProcessRifts/*.o
rm -f ../ProcessRifts/*.lo
rm -f ../PropagateFlagsFromConnectivity/*.o
rm -f ../PropagateFlagsFromConnectivity/*.lo
rm -f ../Scotch/*.o
rm -f ../Scotch/*.lo
rm -f ../ShpRead/*.o
rm -f ../ShpRead/*.lo
rm -f ../Triangle/*.o
rm -f ../Triangle/*.lo
rm -f ./io/*.o
rm -f ./io/*.lo
rm -f *.lo
rm -f *.tab.c
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f ../BamgConvertMesh/.deps/.dirstamp
rm -f ../BamgConvertMesh/.dirstamp
rm -f ../BamgMesher/.deps/.dirstamp
rm -f ../BamgMesher/.dirstamp
rm -f ../BamgTriangulate/.deps/.dirstamp
rm -f ../BamgTriangulate/.dirstamp
rm -f ../Chaco/.deps/.dirstamp
rm -f ../Chaco/.dirstamp
rm -f ../ContourToMesh/.deps/.dirstamp
rm -f ../ContourToMesh/.dirstamp
rm -f ../ContourToNodes/.deps/.dirstamp
rm -f ../ContourToNodes/.dirstamp
rm -f ../CoordTransform/.deps/.dirstamp
rm -f ../CoordTransform/.dirstamp
rm -f ../DistanceToMaskBoundary/.deps/.dirstamp
rm -f ../DistanceToMaskBoundary/.dirstamp
rm -f ../ElementConnectivity/.deps/.dirstamp
rm -f ../ElementConnectivity/.dirstamp
rm -f ../ExpSimplify/.deps/.dirstamp
rm -f ../ExpSimplify/.dirstamp
rm -f ../ExpToLevelSet/.deps/.dirstamp
rm -f ../ExpToLevelSet/.dirstamp
rm -f ../InterpFromGridToMesh/.deps/.dirstamp
rm -f ../InterpFromGridToMesh/.dirstamp
rm -f ../InterpFromMesh2d/.deps/.dirstamp
rm -f ../InterpFromMesh2d/.dirstamp
rm -f ../InterpFromMeshToGrid/.deps/.dirstamp
rm -f ../InterpFromMeshToGrid/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.dirstamp
rm -f ../InterpFromMeshToMesh3d/.deps/.dirstamp
rm -f ../InterpFromMeshToMesh3d/.dirstamp
rm -f ../IssmConfig/.deps/.dirstamp
rm -f ../IssmConfig/.dirstamp
rm -f ../Kriging/.deps/.dirstamp
rm -f ../Kriging/.dirstamp
rm -f ../M1qn3/.deps/.dirstamp
rm -f ../M1qn3/.dirstamp
rm -f ../MeshPartition/.deps/.dirstamp
rm -f ../MeshPartition/.dirstamp
rm -f ../MeshProfileIntersection/.deps/.dirstamp
rm -f ../MeshProfileIntersection/.dirstamp
rm -f ../NodeConnectivity/.deps/.dirstamp
rm -f ../NodeConnectivity/.dirstamp
rm -f ../PointCloudFindNeighbors/.deps/.dirstamp
rm -f ../PointCloudFindNeighbors/.dirstamp
rm -f ../ProcessRifts/.deps/.dirstamp
rm -f ../ProcessRifts/.dirstamp
rm -f ../PropagateFlagsFromConnectivity/.deps/.dirstamp
rm -f ../PropagateFlagsFromConnectivity/.dirstamp
rm -f ../Scotch/.deps/.dirstamp
rm -f ../Scotch/.dirstamp
rm -f ../ShpRead/.deps/.dirstamp
rm -f ../ShpRead/.dirstamp
rm -f ../Triangle/.deps/.dirstamp
rm -f ../Triangle/.dirstamp
rm -f io/.deps/.dirstamp
rm -f io/.dirstamp
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
rm -f ../BamgConvertMesh/.deps/BamgConvertMesh.Plo
rm -f ../BamgMesher/.deps/BamgMesher.Plo
rm -f ../BamgTriangulate/.deps/BamgTriangulate.Plo
rm -f ../Chaco/.deps/Chaco.Plo
rm -f ../ContourToMesh/.deps/ContourToMesh.Plo
rm -f ../ContourToNodes/.deps/ContourToNodes.Plo
rm -f ../CoordTransform/.deps/CoordTransform.Plo
rm -f ../DistanceToMaskBoundary/.deps/DistanceToMaskBoundary.Plo
rm -f ../ElementConnectivity/.deps/ElementConnectivity.Plo
rm -f ../ExpSimplify/.deps/ExpSimplify.Plo
rm -f ../ExpToLevelSet/.deps/ExpToLevelSet.Plo
rm -f ../InterpFromGridToMesh/.deps/InterpFromGridToMesh.Plo
rm -f ../InterpFromMesh2d/.deps/InterpFromMesh2d.Plo
rm -f ../InterpFromMeshToGrid/.deps/InterpFromMeshToGrid.Plo
rm -f ../InterpFromMeshToMesh2d/.deps/InterpFromMeshToMesh2d.Plo
rm -f ../InterpFromMeshToMesh3d/.deps/InterpFromMeshToMesh3d.Plo
rm -f ../IssmConfig/.deps/IssmConfig.Plo
rm -f ../Kriging/.deps/Kriging.Plo
rm -f ../M1qn3/.deps/M1qn3.Plo
rm -f ../MeshPartition/.deps/MeshPartition.Plo
rm -f ../MeshProfileIntersection/.deps/MeshProfileIntersection.Plo
rm -f ../NodeConnectivity/.deps/NodeConnectivity.Plo
rm -f ../PointCloudFindNeighbors/.deps/PointCloudFindNeighbors.Plo
rm -f ../ProcessRifts/.deps/ProcessRifts.Plo
rm -f ../PropagateFlagsFromConnectivity/.deps/PropagateFlagsFromConnectivity.Plo
rm -f ../Scotch/.deps/Scotch.Plo
rm -f ../ShpRead/.deps/ShpRead.Plo
rm -f ../Triangle/.deps/Triangle.Plo
rm -f ./io/.deps/libISSMApi_la-ApiPrintf.Plo
rm -f ./io/.deps/libISSMMatlab_la-CheckNumMatlabArguments.Plo
rm -f ./io/.deps/libISSMMatlab_la-FetchMatlabData.Plo
rm -f ./io/.deps/libISSMMatlab_la-WriteMatlabData.Plo
rm -f Makefile
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
Making distclean in javascript
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/javascript'
 rm -f IssmModule.js
 rm -f IssmModule
test -z "libISSMJavascript.la libISSMApi.la" || rm -f libISSMJavascript.la libISSMApi.la
rm -f ./so_locations
rm -rf .libs _libs
rm -rf ./io/.libs ./io/_libs
rm -f *.o
rm -f ../BamgMesher/*.o
rm -f ../ContourToMesh/*.o
rm -f ../ElementConnectivity/*.o
rm -f ../InterpFromGridToMesh/*.o
rm -f ../InterpFromMeshToMesh2d/*.o
rm -f ../Issm/*.o
rm -f ../IssmConfig/*.o
rm -f ../NodeConnectivity/*.o
rm -f ../Triangle/*.o
rm -f ./io/*.o
rm -f ./io/*.lo
rm -f *.lo
rm -f *.tab.c
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f ../BamgMesher/.deps/.dirstamp
rm -f ../BamgMesher/.dirstamp
rm -f ../ContourToMesh/.deps/.dirstamp
rm -f ../ContourToMesh/.dirstamp
rm -f ../ElementConnectivity/.deps/.dirstamp
rm -f ../ElementConnectivity/.dirstamp
rm -f ../InterpFromGridToMesh/.deps/.dirstamp
rm -f ../InterpFromGridToMesh/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.dirstamp
rm -f ../Issm/.deps/.dirstamp
rm -f ../Issm/.dirstamp
rm -f ../IssmConfig/.deps/.dirstamp
rm -f ../IssmConfig/.dirstamp
rm -f ../NodeConnectivity/.deps/.dirstamp
rm -f ../NodeConnectivity/.dirstamp
rm -f ../Triangle/.deps/.dirstamp
rm -f ../Triangle/.dirstamp
rm -f io/.deps/.dirstamp
rm -f io/.dirstamp
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
rm -f ../BamgMesher/.deps/IssmModule-BamgMesher.Po
rm -f ../ContourToMesh/.deps/IssmModule-ContourToMesh.Po
rm -f ../ElementConnectivity/.deps/IssmModule-ElementConnectivity.Po
rm -f ../InterpFromGridToMesh/.deps/IssmModule-InterpFromGridToMesh.Po
rm -f ../InterpFromMeshToMesh2d/.deps/IssmModule-InterpFromMeshToMesh2d.Po
rm -f ../Issm/.deps/IssmModule-issm.Po
rm -f ../IssmConfig/.deps/IssmModule-IssmConfig.Po
rm -f ../NodeConnectivity/.deps/IssmModule-NodeConnectivity.Po
rm -f ../Triangle/.deps/IssmModule-Triangle.Po
rm -f ./io/.deps/libISSMApi_la-ApiPrintf.Plo
rm -f ./io/.deps/libISSMJavascript_la-FetchJavascriptData.Plo
rm -f ./io/.deps/libISSMJavascript_la-WriteJavascriptData.Plo
rm -f Makefile
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/javascript'
Making distclean in python
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/python'
test -z "libISSMPython.la libISSMApi.la BamgConvertMesh_python.la BamgMesher_python.la BamgTriangulate_python.la ContourToMesh_python.la ContourToNodes_python.la ElementConnectivity_python.la ExpToLevelSet_python.la InterpFromGridToMesh_python.la InterpFromMesh2d_python.la InterpFromMeshToGrid_python.la InterpFromMeshToMesh2d_python.la InterpFromMeshToMesh3d_python.la IssmConfig_python.la MeshPartition_python.la MeshProfileIntersection_python.la NodeConnectivity_python.la Triangle_python.la ProcessRifts_python.la " || rm -f libISSMPython.la libISSMApi.la BamgConvertMesh_python.la BamgMesher_python.la BamgTriangulate_python.la ContourToMesh_python.la ContourToNodes_python.la ElementConnectivity_python.la ExpToLevelSet_python.la InterpFromGridToMesh_python.la InterpFromMesh2d_python.la InterpFromMeshToGrid_python.la InterpFromMeshToMesh2d_python.la InterpFromMeshToMesh3d_python.la IssmConfig_python.la MeshPartition_python.la MeshProfileIntersection_python.la NodeConnectivity_python.la Triangle_python.la ProcessRifts_python.la 
rm -f ./so_locations
rm -rf .libs _libs
rm -rf ../BamgConvertMesh/.libs ../BamgConvertMesh/_libs
rm -rf ../BamgMesher/.libs ../BamgMesher/_libs
rm -rf ../BamgTriangulate/.libs ../BamgTriangulate/_libs
rm -rf ../Chaco/.libs ../Chaco/_libs
rm -rf ../ContourToMesh/.libs ../ContourToMesh/_libs
rm -rf ../ContourToNodes/.libs ../ContourToNodes/_libs
rm -rf ../ElementConnectivity/.libs ../ElementConnectivity/_libs
rm -rf ../ExpToLevelSet/.libs ../ExpToLevelSet/_libs
rm -rf ../InterpFromGridToMesh/.libs ../InterpFromGridToMesh/_libs
rm -rf ../InterpFromMesh2d/.libs ../InterpFromMesh2d/_libs
rm -rf ../InterpFromMeshToGrid/.libs ../InterpFromMeshToGrid/_libs
rm -rf ../InterpFromMeshToMesh2d/.libs ../InterpFromMeshToMesh2d/_libs
rm -rf ../InterpFromMeshToMesh3d/.libs ../InterpFromMeshToMesh3d/_libs
rm -rf ../IssmConfig/.libs ../IssmConfig/_libs
rm -rf ../MeshPartition/.libs ../MeshPartition/_libs
rm -rf ../MeshProfileIntersection/.libs ../MeshProfileIntersection/_libs
rm -rf ../NodeConnectivity/.libs ../NodeConnectivity/_libs
rm -rf ../ProcessRifts/.libs ../ProcessRifts/_libs
rm -rf ../Triangle/.libs ../Triangle/_libs
rm -rf ./io/.libs ./io/_libs
rm -f *.o
rm -f ../BamgConvertMesh/*.o
rm -f ../BamgConvertMesh/*.lo
rm -f ../BamgMesher/*.o
rm -f ../BamgMesher/*.lo
rm -f ../BamgTriangulate/*.o
rm -f ../BamgTriangulate/*.lo
rm -f ../Chaco/*.o
rm -f ../Chaco/*.lo
rm -f ../ContourToMesh/*.o
rm -f ../ContourToMesh/*.lo
rm -f ../ContourToNodes/*.o
rm -f ../ContourToNodes/*.lo
rm -f ../ElementConnectivity/*.o
rm -f ../ElementConnectivity/*.lo
rm -f ../ExpToLevelSet/*.o
rm -f ../ExpToLevelSet/*.lo
rm -f ../InterpFromGridToMesh/*.o
rm -f ../InterpFromGridToMesh/*.lo
rm -f ../InterpFromMesh2d/*.o
rm -f ../InterpFromMesh2d/*.lo
rm -f ../InterpFromMeshToGrid/*.o
rm -f ../InterpFromMeshToGrid/*.lo
rm -f ../InterpFromMeshToMesh2d/*.o
rm -f ../InterpFromMeshToMesh2d/*.lo
rm -f ../InterpFromMeshToMesh3d/*.o
rm -f ../InterpFromMeshToMesh3d/*.lo
rm -f ../IssmConfig/*.o
rm -f ../IssmConfig/*.lo
rm -f ../MeshPartition/*.o
rm -f ../MeshPartition/*.lo
rm -f ../MeshProfileIntersection/*.o
rm -f ../MeshProfileIntersection/*.lo
rm -f ../NodeConnectivity/*.o
rm -f ../NodeConnectivity/*.lo
rm -f ../ProcessRifts/*.o
rm -f ../ProcessRifts/*.lo
rm -f ../Triangle/*.o
rm -f ../Triangle/*.lo
rm -f ./io/*.o
rm -f ./io/*.lo
rm -f *.lo
rm -f *.tab.c
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f ../BamgConvertMesh/.deps/.dirstamp
rm -f ../BamgConvertMesh/.dirstamp
rm -f ../BamgMesher/.deps/.dirstamp
rm -f ../BamgMesher/.dirstamp
rm -f ../BamgTriangulate/.deps/.dirstamp
rm -f ../BamgTriangulate/.dirstamp
rm -f ../Chaco/.deps/.dirstamp
rm -f ../Chaco/.dirstamp
rm -f ../ContourToMesh/.deps/.dirstamp
rm -f ../ContourToMesh/.dirstamp
rm -f ../ContourToNodes/.deps/.dirstamp
rm -f ../ContourToNodes/.dirstamp
rm -f ../ElementConnectivity/.deps/.dirstamp
rm -f ../ElementConnectivity/.dirstamp
rm -f ../ExpToLevelSet/.deps/.dirstamp
rm -f ../ExpToLevelSet/.dirstamp
rm -f ../InterpFromGridToMesh/.deps/.dirstamp
rm -f ../InterpFromGridToMesh/.dirstamp
rm -f ../InterpFromMesh2d/.deps/.dirstamp
rm -f ../InterpFromMesh2d/.dirstamp
rm -f ../InterpFromMeshToGrid/.deps/.dirstamp
rm -f ../InterpFromMeshToGrid/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.dirstamp
rm -f ../InterpFromMeshToMesh3d/.deps/.dirstamp
rm -f ../InterpFromMeshToMesh3d/.dirstamp
rm -f ../IssmConfig/.deps/.dirstamp
rm -f ../IssmConfig/.dirstamp
rm -f ../MeshPartition/.deps/.dirstamp
rm -f ../MeshPartition/.dirstamp
rm -f ../MeshProfileIntersection/.deps/.dirstamp
rm -f ../MeshProfileIntersection/.dirstamp
rm -f ../NodeConnectivity/.deps/.dirstamp
rm -f ../NodeConnectivity/.dirstamp
rm -f ../ProcessRifts/.deps/.dirstamp
rm -f ../ProcessRifts/.dirstamp
rm -f ../Triangle/.deps/.dirstamp
rm -f ../Triangle/.dirstamp
rm -f io/.deps/.dirstamp
rm -f io/.dirstamp
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
rm -f ../BamgConvertMesh/.deps/BamgConvertMesh_python_la-BamgConvertMesh.Plo
rm -f ../BamgMesher/.deps/BamgMesher_python_la-BamgMesher.Plo
rm -f ../BamgTriangulate/.deps/BamgTriangulate_python_la-BamgTriangulate.Plo
rm -f ../Chaco/.deps/Chaco_python_la-Chaco.Plo
rm -f ../ContourToMesh/.deps/ContourToMesh_python_la-ContourToMesh.Plo
rm -f ../ContourToNodes/.deps/ContourToNodes_python_la-ContourToNodes.Plo
rm -f ../ElementConnectivity/.deps/ElementConnectivity_python_la-ElementConnectivity.Plo
rm -f ../ExpToLevelSet/.deps/ExpToLevelSet_python_la-ExpToLevelSet.Plo
rm -f ../InterpFromGridToMesh/.deps/InterpFromGridToMesh_python_la-InterpFromGridToMesh.Plo
rm -f ../InterpFromMesh2d/.deps/InterpFromMesh2d_python_la-InterpFromMesh2d.Plo
rm -f ../InterpFromMeshToGrid/.deps/InterpFromMeshToGrid_python_la-InterpFromMeshToGrid.Plo
rm -f ../InterpFromMeshToMesh2d/.deps/InterpFromMeshToMesh2d_python_la-InterpFromMeshToMesh2d.Plo
rm -f ../InterpFromMeshToMesh3d/.deps/InterpFromMeshToMesh3d_python_la-InterpFromMeshToMesh3d.Plo
rm -f ../IssmConfig/.deps/IssmConfig_python_la-IssmConfig.Plo
rm -f ../MeshPartition/.deps/MeshPartition_python_la-MeshPartition.Plo
rm -f ../MeshProfileIntersection/.deps/MeshProfileIntersection_python_la-MeshProfileIntersection.Plo
rm -f ../NodeConnectivity/.deps/NodeConnectivity_python_la-NodeConnectivity.Plo
rm -f ../ProcessRifts/.deps/ProcessRifts_python_la-ProcessRifts.Plo
rm -f ../Triangle/.deps/Triangle_python_la-Triangle.Plo
rm -f ./io/.deps/libISSMApi_la-ApiPrintf.Plo
rm -f ./io/.deps/libISSMPython_la-CheckNumPythonArguments.Plo
rm -f ./io/.deps/libISSMPython_la-FetchPythonData.Plo
rm -f ./io/.deps/libISSMPython_la-WritePythonData.Plo
rm -f Makefile
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/python'
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
rm -rf .libs _libs
rm -f *.lo
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
rm -f Makefile
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
rm -rf .libs _libs
rm -f *.lo
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
rm -f Makefile
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
rm -rf .libs _libs
rm -f *.lo
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f config.h stamp-h1
rm -f libtool config.lt
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
rm -f cscope.out cscope.in.out cscope.po.out cscope.files
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
rm -f config.status config.cache config.log configure.lineno config.status.lineno
rm -f Makefile
autoreconf: Entering directory `.'
autoreconf: configure.ac: not using Gettext
autoreconf: running: aclocal --force -I m4
autoreconf: configure.ac: tracing
autoreconf: running: libtoolize --copy --force
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, './aux-config'.
libtoolize: copying file './aux-config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
autoreconf: running: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin/autoconf --force
autoreconf: running: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin/autoheader --force
autoreconf: running: automake --add-missing --copy --force-missing
configure.ac:17: installing './aux-config/compile'
configure.ac:24: installing './aux-config/missing'
src/c/Makefile.am: installing './aux-config/depcomp'
autoreconf: Leaving directory `.'
configure: ============================================================================
configure: =      Ice-sheet and Sea-level System Model (ISSM) 4.24 configuration      =
configure: ============================================================================
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking target system type... x86_64-pc-linux-gnu
checking for icc... no
checking for cl... no
checking for icl... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking how to run the C preprocessor... gcc -E
checking for icpc... no
checking for cl... no
checking for icl... no
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for ifort... no
checking for g77... no
checking for gfortran... gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
checking for ifort... no
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking dependency style of gcc... gcc3
checking dependency style of g++... gcc3
checking whether make supports nested variables... (cached) yes
checking for ar... ar
checking the archiver (ar) interface... ar
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
configure: ============================================================================
configure: =                      Checking ISSM specific options                      =
configure: ============================================================================
checking for date... /usr/bin/date
checking for build date... Mon Jul 29 03:38:09 PDT 2024
checking user name... jenkins
checking host full OS name and version... linux
checking host cpu... x86_64
checking vendor... pc
checking host OS name... linux
checking host OS version... 6.1.0-21-amd64
checking host OS architecture... x86_64
checking for debugging support... yes
checking for development support... yes
checking for standalone modules build... no
checking for standalone executables build... no
checking for standalone libraries build... no
checking for wrappers compilation... yes
checking operating system type... Linux
checking for MATLAB... yes
checking MATLAB's mex compilation flags... done
checking for JavaScript... no
checking for triangle... yes
checking for Boost... no
checking for Dakota... no
checking for Python... no
checking for python-numpy... no
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checking for tape allocation... no
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checking for ADOL-C version... 2
checking for ATLAS and CBLAS libraries... no
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checking for PETSc version... 3.20
checking whether PETSc is the development version... no
checking for PETSc libraries and header files in /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install... done
checking for MPI... yes
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checking for libm... done
checking for MATH77... no
checking for Fortran compilation... yes
checking for Fortran library... done
checking for MeteoIO... no
checking for SNOWPACK... no
checking for NeoPZ... no
checking for Gmsh... no
checking for BAMG capability compilation... yes
checking for ice/ocean coupling capability compilation... yes
checking for kml capability compilation... no
checking for kriging capability compilation... yes
checking for HydrologyTws capability compilation... yes
checking for AdjointBalancethickness2 capability compilation... yes
checking for AdjointBalancethickness capability compilation... yes
checking for AdjointHoriz capability compilation... yes
checking for Age capability compilation... yes
checking for Balancethickness2 capability compilation... yes
checking for Balancethickness capability compilation... yes
checking for BalancethicknessSoft capability compilation... yes
checking for Balancevelocity capability compilation... yes
checking for DamageEvolution capability compilation... yes
checking for Debris capability compilation... yes
checking for DepthAverage capability compilation... yes
checking for Enthalpy capability compilation... yes
checking for Esa capability compilation... yes
checking for Extrapolation capability compilation... yes
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checking for ExtrudeFromTop capability compilation... yes
checking for FreeSurfaceBase capability compilation... yes
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checking for HydrologyDCEfficient capability compilation... yes
checking for HydrologyDCInefficient capability compilation... yes
checking for HydrologyGlaDS capability compilation... yes
checking for HydrologyPism capability compilation... yes
checking for HydrologyShakti capability compilation... yes
checking for HydrologyShreve capability compilation... yes
checking for HydrologyArmapw capability compilation... yes
checking for L2ProjectionBase capability compilation... yes
checking for L2ProjectionEPL capability compilation... yes
checking for Levelset capability compilation... yes
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checking for StressbalanceSIA capability compilation... yes
checking for StressbalanceVertical capability compilation... yes
checking for Thermal capability compilation... yes
checking for UzawaPressure capability compilation... yes
checking for number of threads... 4
checking for 64-bit indices... 0
checking consistency between all external packages... done
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/c/Makefile
config.status: creating src/wrappers/Makefile
config.status: creating src/wrappers/python/Makefile
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config.status: creating ./config.h
config.status: executing depfiles commands
config.status: executing libtool commands
======================================================
                    Compiling ISSM                    
======================================================
Making with 8 CPUs
make  all-recursive
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
Making all in src
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
Making all in c
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
  CXX      classes/libISSMCore_la-Profiler.lo
  CXX      main/libISSMCore_la-EnvironmentInit.lo
  CXX      main/libISSMCore_la-EnvironmentFinalize.lo
  CXX      classes/libISSMCore_la-RiftStruct.lo
  CXX      cores/libISSMCore_la-transient_core.lo
  CXX      cores/libISSMCore_la-masstransport_core.lo
  CXX      cores/libISSMCore_la-oceantransport_core.lo
  CXX      cores/libISSMCore_la-steadystate_core.lo
  CXX      cores/libISSMCore_la-depthaverage_core.lo
  CXX      cores/libISSMCore_la-extrudefrombase_core.lo
  CXX      cores/libISSMCore_la-extrudefromtop_core.lo
  CXX      cores/libISSMCore_la-thermal_core.lo
  CXX      cores/libISSMCore_la-smb_core.lo
  CXX      cores/libISSMCore_la-bmb_core.lo
  CXX      cores/libISSMCore_la-debris_core.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_thermal_nonlinear.lo
  CXX      shared/Numerics/libISSMCore_la-BrentSearch.lo
  CXX      cores/libISSMCore_la-control_core.lo
  CXX      cores/libISSMCore_la-controltao_core.lo
  CXX      cores/libISSMCore_la-controlm1qn3_core.lo
  CXX      cores/libISSMCore_la-controladm1qn3_core.lo
  CXX      cores/libISSMCore_la-controlvalidation_core.lo
  CXX      cores/libISSMCore_la-adjointstressbalance_core.lo
  CXX      cores/libISSMCore_la-adjointbalancethickness_core.lo
  CXX      cores/libISSMCore_la-adjointbalancethickness2_core.lo
  CXX      cores/libISSMCore_la-AdjointCorePointerFromSolutionEnum.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_adjoint_linear.lo
  CXX      cores/libISSMCore_la-hydrology_core.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_hydro_nonlinear.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_shakti_nonlinear.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_glads_nonlinear.lo
  CXX      cores/libISSMCore_la-stressbalance_core.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_stokescoupling_nonlinear.lo
  CXX      cores/libISSMCore_la-balancethickness_core.lo
  CXX      cores/libISSMCore_la-balancethickness2_core.lo
  CXX      cores/libISSMCore_la-balancevelocity_core.lo
  CXX      cores/libISSMCore_la-dummy_core.lo
  CXX      cores/libISSMCore_la-surfaceslope_core.lo
  CXX      cores/libISSMCore_la-bedslope_core.lo
  CXX      cores/libISSMCore_la-damage_core.lo
  CXX      cores/libISSMCore_la-levelsetfunctionslope_core.lo
  CXX      cores/libISSMCore_la-movingfront_core.lo
  CXX      cores/libISSMCore_la-groundingline_core.lo
  CXX      classes/Loads/libISSMCore_la-Riftfront.lo
  CXX      modules/ConstraintsStatex/libISSMCore_la-RiftConstraintsState.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-CreateOutputDefinitions.lo
  CXX      analyses/libISSMCore_la-AdjointBalancethicknessAnalysis.lo
  CXX      analyses/libISSMCore_la-AdjointBalancethickness2Analysis.lo
  CXX      analyses/libISSMCore_la-AdjointHorizAnalysis.lo
  CXX      analyses/libISSMCore_la-AgeAnalysis.lo
  CXX      analyses/libISSMCore_la-BalancethicknessAnalysis.lo
  CXX      analyses/libISSMCore_la-Balancethickness2Analysis.lo
  CXX      analyses/libISSMCore_la-BalancethicknessSoftAnalysis.lo
  CXX      analyses/libISSMCore_la-BalancevelocityAnalysis.lo
  CXX      analyses/libISSMCore_la-L2ProjectionBaseAnalysis.lo
  CXX      analyses/libISSMCore_la-DamageEvolutionAnalysis.lo
  CXX      analyses/libISSMCore_la-DebrisAnalysis.lo
  CXX      analyses/libISSMCore_la-StressbalanceAnalysis.lo
  CXX      analyses/libISSMCore_la-UzawaPressureAnalysis.lo
  CXX      analyses/libISSMCore_la-StressbalanceSIAAnalysis.lo
  CXX      analyses/libISSMCore_la-StressbalanceVerticalAnalysis.lo
  CXX      analyses/libISSMCore_la-EnthalpyAnalysis.lo
  CXX      analyses/libISSMCore_la-GLheightadvectionAnalysis.lo
  CXX      analyses/libISSMCore_la-HydrologyShreveAnalysis.lo
  CXX      analyses/libISSMCore_la-HydrologyTwsAnalysis.lo
  CXX      analyses/libISSMCore_la-HydrologyShaktiAnalysis.lo
  CXX      analyses/libISSMCore_la-HydrologyPismAnalysis.lo
  CXX      analyses/libISSMCore_la-HydrologyGlaDSAnalysis.lo
  CXX      analyses/libISSMCore_la-HydrologyDCInefficientAnalysis.lo
  CXX      analyses/libISSMCore_la-HydrologyDCEfficientAnalysis.lo
  CXX      analyses/libISSMCore_la-HydrologyArmapwAnalysis.lo
  CXX      analyses/libISSMCore_la-L2ProjectionEPLAnalysis.lo
  CXX      analyses/libISSMCore_la-MeltingAnalysis.lo
  CXX      analyses/libISSMCore_la-MasstransportAnalysis.lo
  CXX      analyses/libISSMCore_la-OceantransportAnalysis.lo
  CXX      analyses/libISSMCore_la-SmbAnalysis.lo
  CXX      analyses/libISSMCore_la-FreeSurfaceBaseAnalysis.lo
  CXX      analyses/libISSMCore_la-FreeSurfaceTopAnalysis.lo
  CXX      analyses/libISSMCore_la-ExtrudeFromBaseAnalysis.lo
  CXX      analyses/libISSMCore_la-ExtrudeFromTopAnalysis.lo
  CXX      analyses/libISSMCore_la-DepthAverageAnalysis.lo
  CXX      analyses/libISSMCore_la-ThermalAnalysis.lo
  CXX      analyses/libISSMCore_la-SmoothAnalysis.lo
  CXX      analyses/libISSMCore_la-LevelsetAnalysis.lo
  CXX      analyses/libISSMCore_la-ExtrapolationAnalysis.lo
  CXX      cores/libISSMCore_la-love_core.lo
  CXX      analyses/libISSMCore_la-LoveAnalysis.lo
  CXX      cores/libISSMCore_la-esa_core.lo
  CXX      analyses/libISSMCore_la-EsaAnalysis.lo
  CXX      cores/libISSMCore_la-sampling_core.lo
  CXX      analyses/libISSMCore_la-SamplingAnalysis.lo
  CXX      cores/libISSMCore_la-sealevelchange_core.lo
  CXX      analyses/libISSMCore_la-SealevelchangeAnalysis.lo
  CXX      classes/libISSMCore_la-GrdLoads.lo
  CXX      classes/libISSMCore_la-SealevelGeometry.lo
  FC       modules/SurfaceMassBalancex/run_semic.lo
  FC       modules/SurfaceMassBalancex/run_semic_transient.lo
  CXX      shared/String/ApiPrintf.lo
  CXX      modules/Krigingx/libISSMModules_la-Krigingx.lo
  CXX      modules/Krigingx/libISSMModules_la-pKrigingx.lo
  CXX      main/issm_slc-issm_slc.o
  CXX      main/issm_ocean-issm_ocean.o
  CXX      main/kriging-kriging.o
  CXX      main/issm-issm.o
  CXX      bamg/libISSMCore_la-BamgGeom.lo
  CXX      bamg/libISSMCore_la-BamgMesh.lo
  CXX      bamg/libISSMCore_la-BamgOpts.lo
  CXX      bamg/libISSMCore_la-CrackedEdge.lo
  CXX      bamg/libISSMCore_la-Curve.lo
  CXX      bamg/libISSMCore_la-Edge.lo
  CXX      bamg/libISSMCore_la-GeomEdge.lo
  CXX      bamg/libISSMCore_la-GeomSubDomain.lo
  CXX      bamg/libISSMCore_la-GeomVertex.lo
  CXX      bamg/libISSMCore_la-Geometry.lo
  CXX      bamg/libISSMCore_la-ListofIntersectionTriangles.lo
  CXX      bamg/libISSMCore_la-EigenMetric.lo
  CXX      bamg/libISSMCore_la-Metric.lo
  CXX      bamg/libISSMCore_la-BamgQuadtree.lo
  CXX      bamg/libISSMCore_la-SetOfE4.lo
  CXX      bamg/libISSMCore_la-SubDomain.lo
  CXX      bamg/libISSMCore_la-AdjacentTriangle.lo
  CXX      bamg/libISSMCore_la-Triangle.lo
  CXX      bamg/libISSMCore_la-BamgVertex.lo
  CXX      bamg/libISSMCore_la-VertexOnEdge.lo
  CXX      bamg/libISSMCore_la-VertexOnGeom.lo
  CXX      bamg/libISSMCore_la-VertexOnVertex.lo
  CXX      bamg/libISSMCore_la-Mesh.lo
  CXX      shared/Bamg/libISSMCore_la-BigPrimeNumber.lo
  CXX      modules/Bamgx/libISSMCore_la-Bamgx.lo
  CXX      modules/BamgConvertMeshx/libISSMCore_la-BamgConvertMeshx.lo
  CXX      modules/BamgTriangulatex/libISSMCore_la-BamgTriangulatex.lo
  CXX      classes/libISSMCore_la-AmrBamg.lo
  CXX      datastructures/libISSMCore_la-DataSet.lo
  CXX      classes/gauss/libISSMCore_la-GaussSeg.lo
  CXX      classes/gauss/libISSMCore_la-GaussTria.lo
  CXX      classes/gauss/libISSMCore_la-GaussTetra.lo
  CXX      classes/gauss/libISSMCore_la-GaussPenta.lo
  CXX      classes/libISSMCore_la-IoModel.lo
  CXX      classes/libISSMCore_la-FemModel.lo
  CXX      classes/Loads/libISSMCore_la-Friction.lo
  CXX      classes/Constraints/libISSMCore_la-SpcTransient.lo
  CXX      classes/libISSMCore_la-DependentObject.lo
  CXX      classes/libISSMCore_la-Contours.lo
  CXX      classes/libISSMCore_la-Vertices.lo
  CXX      classes/libISSMCore_la-Nodes.lo
  CXX      classes/libISSMCore_la-Numberedcostfunction.lo
  CXX      classes/libISSMCore_la-Misfit.lo
  CXX      classes/libISSMCore_la-Cfsurfacesquare.lo
  CXX      classes/libISSMCore_la-Cfsurfacesquaretransient.lo
  CXX      classes/libISSMCore_la-Cfdragcoeffabsgrad.lo
  CXX      classes/libISSMCore_la-Cfdragcoeffabsgradtransient.lo
  CXX      classes/libISSMCore_la-Cfrheologybbarabsgrad.lo
  CXX      classes/libISSMCore_la-Cfrheologybbarabsgradtransient.lo
  CXX      classes/libISSMCore_la-Cfsurfacelogvel.lo
  CXX      classes/libISSMCore_la-Cflevelsetmisfit.lo
  CXX      classes/libISSMCore_la-Regionaloutput.lo
  CXX      classes/libISSMCore_la-Nodalvalue.lo
  CXX      classes/libISSMCore_la-Node.lo
  CXX      classes/libISSMCore_la-Vertex.lo
  CXX      classes/libISSMCore_la-Hook.lo
  CXX      classes/libISSMCore_la-Radar.lo
  CXX      classes/libISSMCore_la-BarystaticContributions.lo
  CXX      classes/ExternalResults/libISSMCore_la-Results.lo
  CXX      classes/Elements/libISSMCore_la-Element.lo
  CXX      classes/Elements/libISSMCore_la-Elements.lo
  CXX      classes/Elements/libISSMCore_la-ElementHook.lo
  CXX      classes/Elements/libISSMCore_la-Seg.lo
  CXX      classes/Elements/libISSMCore_la-SegRef.lo
  CXX      classes/Elements/libISSMCore_la-Tria.lo
  CXX      classes/Elements/libISSMCore_la-TriaRef.lo
  CXX      classes/Elements/libISSMCore_la-Tetra.lo
  CXX      classes/Elements/libISSMCore_la-TetraRef.lo
  CXX      classes/Elements/libISSMCore_la-Penta.lo
  CXX      classes/Elements/libISSMCore_la-PentaRef.lo
  CXX      classes/Materials/libISSMCore_la-Materials.lo
  CXX      classes/Materials/libISSMCore_la-Matice.lo
  CXX      classes/Materials/libISSMCore_la-Matlitho.lo
  CXX      classes/Materials/libISSMCore_la-Matestar.lo
  CXX      classes/Constraints/libISSMCore_la-Constraints.lo
  CXX      classes/Constraints/libISSMCore_la-SpcStatic.lo
  CXX      classes/Constraints/libISSMCore_la-SpcDynamic.lo
  CXX      classes/Loads/libISSMCore_la-Channel.lo
  CXX      classes/Loads/libISSMCore_la-Loads.lo
  CXX      classes/Loads/libISSMCore_la-Penpair.lo
  CXX      classes/Loads/libISSMCore_la-Pengrid.lo
  CXX      classes/Loads/libISSMCore_la-Moulin.lo
  CXX      classes/Loads/libISSMCore_la-Numericalflux.lo
  CXX      classes/Loads/libISSMCore_la-Neumannflux.lo
  CXX      classes/matrix/libISSMCore_la-ElementMatrix.lo
  CXX      classes/matrix/libISSMCore_la-ElementVector.lo
  CXX      classes/Params/libISSMCore_la-Parameters.lo
  CXX      classes/Params/libISSMCore_la-BoolParam.lo
  CXX      classes/Params/libISSMCore_la-ControlParam.lo
  CXX      classes/Params/libISSMCore_la-IntParam.lo
  CXX      classes/Params/libISSMCore_la-IntVecParam.lo
  CXX      classes/Params/libISSMCore_la-IntMatParam.lo
  CXX      classes/Params/libISSMCore_la-DoubleParam.lo
  CXX      classes/Params/libISSMCore_la-FileParam.lo
  CXX      classes/Params/libISSMCore_la-StringArrayParam.lo
  CXX      classes/Params/libISSMCore_la-DoubleMatParam.lo
  CXX      classes/Params/libISSMCore_la-DoubleTransientMatParam.lo
  CXX      classes/Params/libISSMCore_la-DoubleMatArrayParam.lo
  CXX      classes/Params/libISSMCore_la-DoubleVecParam.lo
  CXX      classes/Params/libISSMCore_la-StringParam.lo
  CXX      classes/Params/libISSMCore_la-MatrixParam.lo
  CXX      classes/Params/libISSMCore_la-VectorParam.lo
  CXX      classes/Params/libISSMCore_la-TransientParam.lo
  CXX      classes/Params/libISSMCore_la-TransientArrayParam.lo
  CXX      classes/Params/libISSMCore_la-DataSetParam.lo
  CXX      shared/Matrix/libISSMCore_la-MatrixUtils.lo
  CXX      shared/io/Disk/libISSMCore_la-pfopen.lo
  CXX      shared/io/Disk/libISSMCore_la-pfclose.lo
  CXX      shared/io/Disk/libISSMCore_la-WriteLockFile.lo
  CXX      shared/io/Print/libISSMCore_la-PrintfFunction.lo
  CXX      shared/io/Comm/libISSMCore_la-IssmComm.lo
  CXX      shared/io/Marshalling/libISSMCore_la-IoCodeConversions.lo
  CXX      shared/io/Marshalling/libISSMCore_la-Marshalling.lo
  CXX      shared/LatLong/libISSMCore_la-Ll2xyx.lo
  CXX      shared/LatLong/libISSMCore_la-Xy2llx.lo
  CXX      shared/FSanalyticals/libISSMCore_la-fsanalyticals.lo
  CXX      shared/Enum/libISSMCore_la-EnumToStringx.lo
  CXX      shared/Enum/libISSMCore_la-StringToEnumx.lo
  CXX      shared/Numerics/libISSMCore_la-Verbosity.lo
  CXX      shared/Numerics/libISSMCore_la-GaussPoints.lo
  CXX      shared/Numerics/libISSMCore_la-cross.lo
  CXX      shared/Numerics/libISSMCore_la-cubic.lo
  CXX      shared/Numerics/libISSMCore_la-NewtonSolveDnorm.lo
  CXX      shared/Numerics/libISSMCore_la-ODE1.lo
  CXX      shared/Numerics/libISSMCore_la-extrema.lo
  CXX      shared/Numerics/libISSMCore_la-legendre.lo
  CXX      shared/Numerics/libISSMCore_la-XZvectorsToCoordinateSystem.lo
  CXX      shared/Exceptions/libISSMCore_la-Exceptions.lo
  CXX      shared/Sorting/libISSMCore_la-binary_search.lo
  CXX      shared/Elements/libISSMCore_la-Cuffey.lo
  CXX      shared/Elements/libISSMCore_la-BuddJacka.lo
  CXX      shared/Elements/libISSMCore_la-CuffeyTemperate.lo
  CXX      shared/Elements/libISSMCore_la-StressIntensityIntegralWeight.lo
  CXX      shared/Elements/libISSMCore_la-Paterson.lo
  CXX      shared/Elements/libISSMCore_la-Arrhenius.lo
  CXX      shared/Elements/libISSMCore_la-NyeCO2.lo
  CXX      shared/Elements/libISSMCore_la-NyeH2O.lo
  CXX      shared/Elements/libISSMCore_la-LliboutryDuval.lo
  CXX      shared/Elements/libISSMCore_la-PrintArrays.lo
  CXX      shared/Elements/libISSMCore_la-PddSurfaceMassBalance.lo
  CXX      shared/Elements/libISSMCore_la-PddSurfaceMassBalanceSicopolis.lo
  CXX      shared/Elements/libISSMCore_la-ComputeDelta18oTemperaturePrecipitation.lo
  CXX      shared/Elements/libISSMCore_la-ComputeMungsmTemperaturePrecipitation.lo
  CXX      shared/Elements/libISSMCore_la-ComputeD18OTemperaturePrecipitationFromPD.lo
  CXX      shared/Elements/libISSMCore_la-DrainageFunctionWaterfraction.lo
  CXX      shared/Elements/libISSMCore_la-EstarComponents.lo
  CXX      shared/Random/libISSMCore_la-random.lo
  CXX      shared/Random/libISSMCore_la-randomgenerator.lo
  CXX      shared/String/libISSMCore_la-DescriptorIndex.lo
  CXX      toolkits/issm/libISSMCore_la-IssmToolkitUtils.lo
  CXX      toolkits/issm/libISSMCore_la-IssmSolver.lo
  CXX      toolkits/mpi/libISSMCore_la-issmmpi.lo
  CXX      toolkits/mpi/commops/libISSMCore_la-DetermineLocalSize.lo
  CXX      toolkits/mpi/commops/libISSMCore_la-DetermineGlobalSize.lo
  CXX      toolkits/mpi/commops/libISSMCore_la-DetermineRowRankFromLocalSize.lo
  CXX      toolkits/mpi/commops/libISSMCore_la-GetOwnershipBoundariesFromRange.lo
  CXX      toolkits/libISSMCore_la-ToolkitOptions.lo
  CXX      modules/MmeToInputFromIdx/libISSMCore_la-MmeToInputFromIdx.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-ModelProcessorx.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-ElementsAndVerticesPartitioning.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-NodesPartitioning.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-EdgesPartitioning.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-FacesPartitioning.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-CreateParameters.lo
  CXX      modules/ModelProcessorx/Autodiff/libISSMCore_la-CreateParametersAutodiff.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-CreateFaces.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-CreateEdges.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-CreateSingleNodeToElementConnectivity.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-CreateNumberNodeToElementConnectivity.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-CreateElementsVerticesAndMaterials.lo
  CXX      modules/ModelProcessorx/libISSMCore_la-CreateNodes.lo
  CXX      modules/ParseToolkitsOptionsx/libISSMCore_la-ParseToolkitsOptionsx.lo
  CXX      modules/NodesDofx/libISSMCore_la-NodesDofx.lo
  CXX      modules/NodalValuex/libISSMCore_la-NodalValuex.lo
  CXX      modules/VertexCoordinatesx/libISSMCore_la-VertexCoordinatesx.lo
  CXX      modules/ElementCoordinatesx/libISSMCore_la-ElementCoordinatesx.lo
  CXX      modules/OutputResultsx/libISSMCore_la-OutputResultsx.lo
  CXX      modules/InputDepthAverageAtBasex/libISSMCore_la-InputDepthAverageAtBasex.lo
  CXX      modules/InputDuplicatex/libISSMCore_la-InputDuplicatex.lo
  CXX      modules/InputExtrudex/libISSMCore_la-InputExtrudex.lo
  CXX      modules/SurfaceAreax/libISSMCore_la-SurfaceAreax.lo
  CXX      modules/AllocateSystemMatricesx/libISSMCore_la-AllocateSystemMatricesx.lo
  CXX      modules/CreateJacobianMatrixx/libISSMCore_la-CreateJacobianMatrixx.lo
  CXX      modules/SystemMatricesx/libISSMCore_la-SystemMatricesx.lo
  CXX      modules/CreateNodalConstraintsx/libISSMCore_la-CreateNodalConstraintsx.lo
  CXX      modules/UpdateDynamicConstraintsx/libISSMCore_la-UpdateDynamicConstraintsx.lo
  CXX      modules/IoModelToConstraintsx/libISSMCore_la-IoModelToConstraintsx.lo
  CXX      modules/SetActiveNodesLSMx/libISSMCore_la-SetActiveNodesLSMx.lo
  CXX      modules/InputUpdateFromConstantx/libISSMCore_la-InputUpdateFromConstantx.lo
  CXX      modules/InputUpdateFromSolutionx/libISSMCore_la-InputUpdateFromSolutionx.lo
  CXX      modules/GeothermalFluxx/libISSMCore_la-GeothermalFluxx.lo
  CXX      modules/GetSolutionFromInputsx/libISSMCore_la-GetSolutionFromInputsx.lo
  CXX      modules/GetVectorFromInputsx/libISSMCore_la-GetVectorFromInputsx.lo
  CXX      modules/InputUpdateFromVectorx/libISSMCore_la-InputUpdateFromVectorx.lo
  CXX      modules/FloatingiceMeltingRatex/libISSMCore_la-FloatingiceMeltingRatex.lo
  CXX      modules/FloatingiceMeltingRatePicox/libISSMCore_la-FloatingiceMeltingRatePicox.lo
  CXX      modules/FrontalForcingsx/libISSMCore_la-FrontalForcingsx.lo
  CXX      modules/ConfigureObjectsx/libISSMCore_la-ConfigureObjectsx.lo
  CXX      modules/SpcNodesx/libISSMCore_la-SpcNodesx.lo
  CXX      modules/SurfaceMassBalancex/libISSMCore_la-SurfaceMassBalancex.lo
  CXX      modules/SurfaceMassBalancex/libISSMCore_la-Gembx.lo
  CXX      modules/Reducevectorgtofx/libISSMCore_la-Reducevectorgtofx.lo
  CXX      modules/Reduceloadx/libISSMCore_la-Reduceloadx.lo
  CXX      modules/ConstraintsStatex/libISSMCore_la-ConstraintsStatex.lo
  CXX      modules/ResetConstraintsx/libISSMCore_la-ResetConstraintsx.lo
  CXX      modules/ResetFSBasalBoundaryConditionx/libISSMCore_la-ResetFSBasalBoundaryConditionx.lo
  CXX      modules/Solverx/libISSMCore_la-Solverx.lo
  CXX      modules/StochasticForcingx/libISSMCore_la-StochasticForcingx.lo
  CXX      modules/Mergesolutionfromftogx/libISSMCore_la-Mergesolutionfromftogx.lo
  CXX      cores/libISSMCore_la-ProcessArguments.lo
  CXX      cores/libISSMCore_la-ResetBoundaryConditions.lo
  CXX      cores/libISSMCore_la-WrapperCorePointerFromSolutionEnum.lo
  CXX      cores/libISSMCore_la-WrapperPreCorePointerFromSolutionEnum.lo
  CXX      cores/libISSMCore_la-CorePointerFromSolutionEnum.lo
  CXX      cores/libISSMCore_la-ad_core.lo
  CXX      analyses/libISSMCore_la-EnumToAnalysis.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_la.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_la_theta.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_linear.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_nonlinear.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_newton.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_fct.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_schurcg.lo
  CXX      solutionsequences/libISSMCore_la-solutionsequence_sampling.lo
  CXX      solutionsequences/libISSMCore_la-convergence.lo
  CXX      classes/Options/libISSMCore_la-Options.lo
  CXX      classes/Options/libISSMCore_la-OptionUtilities.lo
  CXX      modules/ModelProcessorx/Transient/libISSMCore_la-UpdateElementsTransient.lo
  CXX      modules/ModelProcessorx/Transient/libISSMCore_la-UpdateParametersTransient.lo
  CXX      modules/ControlInputSetGradientx/libISSMCore_la-ControlInputSetGradientx.lo
  CXX      modules/GetVectorFromControlInputsx/libISSMCore_la-GetVectorFromControlInputsx.lo
  CXX      modules/SetControlInputsFromVectorx/libISSMCore_la-SetControlInputsFromVectorx.lo
  CXX      modules/ModelProcessorx/Control/libISSMCore_la-CreateParametersControl.lo
  CXX      modules/ModelProcessorx/Control/libISSMCore_la-UpdateElementsAndMaterialsControl.lo
  CXX      modules/SurfaceAbsVelMisfitx/libISSMCore_la-SurfaceAbsVelMisfitx.lo
  CXX      modules/SurfaceRelVelMisfitx/libISSMCore_la-SurfaceRelVelMisfitx.lo
  CXX      modules/SurfaceLogVelMisfitx/libISSMCore_la-SurfaceLogVelMisfitx.lo
  CXX      modules/SurfaceLogVxVyMisfitx/libISSMCore_la-SurfaceLogVxVyMisfitx.lo
  CXX      modules/SurfaceAverageVelMisfitx/libISSMCore_la-SurfaceAverageVelMisfitx.lo
  CXX      modules/ThicknessAbsMisfitx/libISSMCore_la-ThicknessAbsMisfitx.lo
  CXX      modules/Gradjx/libISSMCore_la-Gradjx.lo
  CXX      modules/DragCoefficientAbsGradientx/libISSMCore_la-DragCoefficientAbsGradientx.lo
  CXX      modules/ThicknessAlongGradientx/libISSMCore_la-ThicknessAlongGradientx.lo
  CXX      modules/ThicknessAcrossGradientx/libISSMCore_la-ThicknessAcrossGradientx.lo
  CXX      modules/RheologyBbarAbsGradientx/libISSMCore_la-RheologyBbarAbsGradientx.lo
  CXX      modules/RheologyBAbsGradientx/libISSMCore_la-RheologyBAbsGradientx.lo
  CXX      modules/GroundinglineMigrationx/libISSMCore_la-GroundinglineMigrationx.lo
  CXX      modules/OutputDefinitionsResponsex/libISSMCore_la-OutputDefinitionsResponsex.lo
  CXX      modules/InterpFromMeshToMesh2dx/libISSMCore_la-InterpFromMeshToMesh2dx.lo
  CXX      classes/Inputs/libISSMCore_la-Inputs.lo
  CXX      classes/Inputs/libISSMCore_la-BoolInput.lo
  CXX      classes/Inputs/libISSMCore_la-DoubleInput.lo
  CXX      classes/Inputs/libISSMCore_la-IntInput.lo
  CXX      classes/Inputs/libISSMCore_la-ElementInput.lo
  CXX      classes/Inputs/libISSMCore_la-SegInput.lo
  CXX      classes/Inputs/libISSMCore_la-TriaInput.lo
  CXX      classes/Inputs/libISSMCore_la-PentaInput.lo
  CXX      classes/Inputs/libISSMCore_la-DatasetInput.lo
  CXX      classes/Inputs/libISSMCore_la-ControlInput.lo
  CXX      classes/Inputs/libISSMCore_la-TransientInput.lo
  CXX      classes/Inputs/libISSMCore_la-ArrayInput.lo
  CXX      classes/Inputs/libISSMCore_la-IntArrayInput.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-VecToMPISerial.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-MatToMPISerial.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-NewVec.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-PetscOptionsDetermineSolverType.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-NewMat.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-VecFree.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-KSPFree.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-MatFree.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-MatMultPatch.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-ISSMToPetscMatrixType.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-ISSMToPetscInsertMode.lo
  CXX      toolkits/petsc/patches/libISSMCore_la-ISSMToPetscNormMode.lo
  CXX      toolkits/petsc/objects/libISSMCore_la-PetscMat.lo
  CXX      toolkits/petsc/objects/libISSMCore_la-PetscVec.lo
  CXX      toolkits/petsc/objects/libISSMCore_la-PetscSolver.lo
  CXX      toolkits/mumps/libISSMCore_la-MumpsSolve.lo
  CXX      modules/Damagex/libISSMCore_la-Damagex.lo
  CXX      modules/Calvingx/libISSMCore_la-Calvingx.lo
  CXX      modules/KillIcebergsx/libISSMCore_la-KillIcebergsx.lo
  CXX      modules/OceanExchangeDatax/libISSMCore_la-OceanExchangeDatax.lo
  CXX      modules/GiaDeflectionCorex/libISSMCore_la-GiaDeflectionCorex.lo
  F77      modules/GiaDeflectionCorex/libISSMCore_la-distme.lo
  F77      modules/GiaDeflectionCorex/libISSMCore_la-freed.lo
  F77      modules/GiaDeflectionCorex/libISSMCore_la-ojrule.lo
  F77      modules/GiaDeflectionCorex/libISSMCore_la-pwise.lo
  F77      modules/GiaDeflectionCorex/libISSMCore_la-qwise.lo
  F77      modules/GiaDeflectionCorex/libISSMCore_la-stot.lo
  F77      modules/GiaDeflectionCorex/libISSMCore_la-what0.lo
  CXX      modules/MeshPartitionx/libISSMCore_la-MeshPartitionx.lo
  CXX      toolkits/metis/patches/libISSMCore_la-METIS_PartMeshNodalPatch.lo
  CXX      classes/kriging/libISSMCore_la-Observations.lo
  CXX      classes/kriging/libISSMCore_la-GaussianVariogram.lo
  CXX      classes/kriging/libISSMCore_la-ExponentialVariogram.lo
  CXX      classes/kriging/libISSMCore_la-SphericalVariogram.lo
  CXX      classes/kriging/libISSMCore_la-PowerVariogram.lo
  CXX      classes/kriging/libISSMCore_la-Quadtree.lo
  CXX      classes/kriging/libISSMCore_la-Covertree.lo
  CXX      classes/kriging/libISSMCore_la-Observation.lo
  CXX      modules/Krigingx/libISSMCore_la-pKrigingx.lo
  CXXLD    libISSMOverload.la
  CXX      shared/Threads/libISSMModules_la-LaunchThread.lo
  CXX      shared/Threads/libISSMModules_la-PartitionRange.lo
  CXX      shared/Exp/libISSMModules_la-exp.lo
  CXX      shared/Triangle/libISSMModules_la-AssociateSegmentToElement.lo
  CXX      shared/Triangle/libISSMModules_la-GridInsideHole.lo
  CXX      shared/Triangle/libISSMModules_la-OrderSegments.lo
  CXX      shared/Triangle/libISSMModules_la-SplitMeshForRifts.lo
  CXX      shared/Triangle/libISSMModules_la-TriangleUtils.lo
  CXX      modules/Trianglex/libISSMModules_la-Trianglex.lo
  CXX      modules/ProcessRiftsx/libISSMModules_la-ProcessRiftsx.lo
  CXX      modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo
  CXX      modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo
  CXX      modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo
  CXX      modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo
  CXX      modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo
  CXX      modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo
  CXX      modules/InterpFromMeshToGridx/libISSMModules_la-InterpFromMeshToGridx.lo
  CXX      modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo
  CXX      modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo
  CXX      modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo
  CXX      modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo
  CXX      modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo
  CXX      modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo
  CXX      modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo
  CXX      modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo
  CXX      modules/NodeConnectivityx/libISSMModules_la-NodeConnectivityx.lo
  CXX      modules/ElementConnectivityx/libISSMModules_la-ElementConnectivityx.lo
  CXX      modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo
  CXXLD    libISSMCore.la
  CXXLD    libISSMModules.la
  CXXLD    issm_slc.exe
  CXXLD    issm.exe
  CXXLD    issm_ocean.exe
  CXXLD    kriging.exe
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
Making all in m
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
Making all in wrappers
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
Making all in matlab
make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
  CXX      io/libISSMMatlab_la-CheckNumMatlabArguments.lo
  CXX      io/libISSMMatlab_la-FetchMatlabData.lo
  CXX      io/libISSMMatlab_la-WriteMatlabData.lo
  CXX      ../BamgConvertMesh/BamgConvertMesh.lo
  CXX      io/libISSMApi_la-ApiPrintf.lo
  CXX      ../BamgMesher/BamgMesher.lo
  CXX      ../BamgTriangulate/BamgTriangulate.lo
  CXX      ../ContourToMesh/ContourToMesh.lo
  CXX      ../ContourToNodes/ContourToNodes.lo
  CXX      ../DistanceToMaskBoundary/DistanceToMaskBoundary.lo
  CXX      ../ElementConnectivity/ElementConnectivity.lo
  CXX      ../ExpSimplify/ExpSimplify.lo
  CXX      ../ExpToLevelSet/ExpToLevelSet.lo
  CXX      ../InterpFromGridToMesh/InterpFromGridToMesh.lo
  CXX      ../InterpFromMesh2d/InterpFromMesh2d.lo
  CXX      ../InterpFromMeshToGrid/InterpFromMeshToGrid.lo
  CXX      ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.lo
  CXX      ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.lo
  CXX      ../IssmConfig/IssmConfig.lo
  CXX      ../M1qn3/M1qn3.lo
  CXX      ../MeshPartition/MeshPartition.lo
  CXX      ../MeshProfileIntersection/MeshProfileIntersection.lo
  CXX      ../NodeConnectivity/NodeConnectivity.lo
  CXX      ../PointCloudFindNeighbors/PointCloudFindNeighbors.lo
  CXX      ../ProcessRifts/ProcessRifts.lo
  CXX      ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.lo
  CXX      ../Scotch/Scotch.lo
  CXX      ../Triangle/Triangle.lo
  CXX      ../Kriging/Kriging.lo
  CXXLD    libISSMMatlab.la
  CXXLD    libISSMApi.la
  CXXLD    BamgConvertMesh_matlab.la
  CXXLD    BamgMesher_matlab.la
  CXXLD    BamgTriangulate_matlab.la
  CXXLD    ContourToMesh_matlab.la
  CXXLD    ContourToNodes_matlab.la
  CXXLD    DistanceToMaskBoundary_matlab.la
  CXXLD    ElementConnectivity_matlab.la
  CXXLD    ExpSimplify_matlab.la
  CXXLD    ExpToLevelSet_matlab.la
  CXXLD    InterpFromGridToMesh_matlab.la
  CXXLD    InterpFromMesh2d_matlab.la
  CXXLD    InterpFromMeshToGrid_matlab.la
  CXXLD    InterpFromMeshToMesh2d_matlab.la
  CXXLD    InterpFromMeshToMesh3d_matlab.la
  CXXLD    IssmConfig_matlab.la
  CXXLD    M1qn3_matlab.la
  CXXLD    MeshPartition_matlab.la
  CXXLD    MeshProfileIntersection_matlab.la
  CXXLD    NodeConnectivity_matlab.la
  CXXLD    PointCloudFindNeighbors_matlab.la
  CXXLD    ProcessRifts_matlab.la
  CXXLD    PropagateFlagsFromConnectivity_matlab.la
  CXXLD    Scotch_matlab.la
  CXXLD    Triangle_matlab.la
  CXXLD    Kriging_matlab.la
make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[4]: Nothing to be done for 'all-am'.
make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[3]: Nothing to be done for 'all-am'.
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
Making install in src
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
Making install in c
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
  CXXLD    issm.exe
  CXXLD    issm_slc.exe
  CXXLD    issm_ocean.exe
  CXXLD    kriging.exe
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
  CXXLD    issm.exe
  CXXLD    issm_slc.exe
  CXXLD    issm_ocean.exe
  CXXLD    kriging.exe
 /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib'
 /bin/bash ../../libtool   --mode=install /usr/bin/install -c   libISSMCore.la libISSMOverload.la libISSMModules.la '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib'
libtool: install: /usr/bin/install -c .libs/libISSMCore.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so
libtool: install: /usr/bin/install -c .libs/libISSMCore.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.la
libtool: install: /usr/bin/install -c .libs/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so
libtool: install: /usr/bin/install -c .libs/libISSMOverload.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.la
libtool: warning: relinking 'libISSMModules.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -g -O2 -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -avoid-version -o libISSMModules.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ./shared/Threads/libISSMModules_la-LaunchThread.lo ./shared/Threads/libISSMModules_la-PartitionRange.lo ./shared/Exp/libISSMModules_la-exp.lo ./shared/Triangle/libISSMModules_la-AssociateSegmentToElement.lo ./shared/Triangle/libISSMModules_la-GridInsideHole.lo ./shared/Triangle/libISSMModules_la-OrderSegments.lo ./shared/Triangle/libISSMModules_la-SplitMeshForRifts.lo ./shared/Triangle/libISSMModules_la-TriangleUtils.lo ./modules/Trianglex/libISSMModules_la-Trianglex.lo ./modules/ProcessRiftsx/libISSMModules_la-ProcessRiftsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo ./modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo ./modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo ./modules/InterpFromMeshToGridx/libISSMModules_la-InterpFromMeshToGridx.lo ./modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo ./modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo ./modules/NodeConnectivityx/libISSMModules_la-NodeConnectivityx.lo ./modules/ElementConnectivityx/libISSMModules_la-ElementConnectivityx.lo ./modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo ./modules/Krigingx/libISSMModules_la-Krigingx.lo ./modules/Krigingx/libISSMModules_la-pKrigingx.lo ./libISSMCore.la -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/triangle/install/lib -ltriangle -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lflapack -lfblas )
libtool: install: /usr/bin/install -c .libs/libISSMModules.soT /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so
libtool: install: /usr/bin/install -c .libs/libISSMModules.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.la
libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/scripts:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/dyson/:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib
----------------------------------------------------------------------
Libraries have been installed in:
   /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib

If you ever happen to want to link against installed libraries
in a given directory, LIBDIR, you must either use libtool, and
specify the full pathname of the library, or use the '-LLIBDIR'
flag during linking and do at least one of the following:
   - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable
     during execution
   - add LIBDIR to the 'LD_RUN_PATH' environment variable
     during linking
   - use the '-Wl,-rpath -Wl,LIBDIR' linker flag
   - have your system administrator add LIBDIR to '/etc/ld.so.conf'

See any operating system documentation about shared libraries for
more information, such as the ld(1) and ld.so(8) manual pages.
----------------------------------------------------------------------
 /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin'
  /bin/bash ../../libtool   --mode=install /usr/bin/install -c issm.exe issm_slc.exe issm_ocean.exe kriging.exe '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin'
libtool: install: /usr/bin/install -c .libs/issm.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm.exe
libtool: install: /usr/bin/install -c .libs/issm_slc.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm_slc.exe
libtool: install: /usr/bin/install -c .libs/issm_ocean.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm_ocean.exe
libtool: install: /usr/bin/install -c .libs/kriging.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/kriging.exe
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
Making install in m
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
 /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin'
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
Making install in wrappers
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
Making install in matlab
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
 /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib'
 /bin/bash ../../../libtool   --mode=install /usr/bin/install -c   libISSMMatlab.la libISSMApi.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la M1qn3_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la Kriging_matlab.la '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib'
libtool: warning: relinking 'libISSMMatlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -avoid-version -o libISSMMatlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ./io/libISSMMatlab_la-CheckNumMatlabArguments.lo ./io/libISSMMatlab_la-FetchMatlabData.lo ./io/libISSMMatlab_la-WriteMatlabData.lo ./../../c/libISSMCore.la ./../../c/libISSMModules.la -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lpetsc -ldl -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -ldmumps -lcmumps -lmumps_common -lpord -lzmumps -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lscalapack -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lflapack -lfblas -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lparmetis -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lmetis -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/libISSMMatlab.soT /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so
libtool: install: /usr/bin/install -c .libs/libISSMMatlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.la
libtool: install: /usr/bin/install -c .libs/libISSMApi.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.so
libtool: install: /usr/bin/install -c .libs/libISSMApi.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.la
libtool: warning: relinking 'BamgConvertMesh_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgConvertMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgConvertMesh/BamgConvertMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.la
libtool: warning: relinking 'BamgMesher_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgMesher_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgMesher/BamgMesher.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.la
libtool: warning: relinking 'BamgTriangulate_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgTriangulate_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgTriangulate/BamgTriangulate.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.la
libtool: warning: relinking 'ContourToMesh_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ContourToMesh/ContourToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.la
libtool: warning: relinking 'ContourToNodes_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToNodes_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ContourToNodes/ContourToNodes.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.la
libtool: warning: relinking 'DistanceToMaskBoundary_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o DistanceToMaskBoundary_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../DistanceToMaskBoundary/DistanceToMaskBoundary.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.la
libtool: warning: relinking 'ElementConnectivity_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ElementConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ElementConnectivity/ElementConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.la
libtool: warning: relinking 'ExpSimplify_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpSimplify_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ExpSimplify/ExpSimplify.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.la
libtool: warning: relinking 'ExpToLevelSet_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpToLevelSet_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ExpToLevelSet/ExpToLevelSet.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.la
libtool: warning: relinking 'InterpFromGridToMesh_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromGridToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromGridToMesh/InterpFromGridToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.la
libtool: warning: relinking 'InterpFromMesh2d_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMesh2d/InterpFromMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.la
libtool: warning: relinking 'InterpFromMeshToGrid_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToGrid_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToGrid/InterpFromMeshToGrid.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.la
libtool: warning: relinking 'InterpFromMeshToMesh2d_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.la
libtool: warning: relinking 'InterpFromMeshToMesh3d_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh3d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.la
libtool: warning: relinking 'IssmConfig_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o IssmConfig_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../IssmConfig/IssmConfig.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.la
libtool: warning: relinking 'M1qn3_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o M1qn3_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../M1qn3/M1qn3.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/M1qn3_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/M1qn3_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.la
libtool: warning: relinking 'MeshPartition_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshPartition_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../MeshPartition/MeshPartition.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.la
libtool: warning: relinking 'MeshProfileIntersection_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshProfileIntersection_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../MeshProfileIntersection/MeshProfileIntersection.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.la
libtool: warning: relinking 'NodeConnectivity_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o NodeConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../NodeConnectivity/NodeConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.la
libtool: warning: relinking 'PointCloudFindNeighbors_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PointCloudFindNeighbors_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../PointCloudFindNeighbors/PointCloudFindNeighbors.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.la
libtool: warning: relinking 'ProcessRifts_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ProcessRifts_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ProcessRifts/ProcessRifts.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.la
libtool: warning: relinking 'PropagateFlagsFromConnectivity_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PropagateFlagsFromConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.la
libtool: warning: relinking 'Scotch_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Scotch_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Scotch/Scotch.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/Scotch_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/Scotch_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.la
libtool: warning: relinking 'Triangle_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Triangle_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Triangle/Triangle.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/triangle/install/lib -ltriangle )
libtool: install: /usr/bin/install -c .libs/Triangle_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/Triangle_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.la
libtool: warning: relinking 'Kriging_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Kriging_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Kriging/Kriging.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat )
libtool: install: /usr/bin/install -c .libs/Kriging_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/Kriging_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.la
libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/scripts:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/dyson/:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib
----------------------------------------------------------------------
Libraries have been installed in:
   /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib

If you ever happen to want to link against installed libraries
in a given directory, LIBDIR, you must either use libtool, and
specify the full pathname of the library, or use the '-LLIBDIR'
flag during linking and do at least one of the following:
   - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable
     during execution
   - add LIBDIR to the 'LD_RUN_PATH' environment variable
     during linking
   - use the '-Wl,-rpath -Wl,LIBDIR' linker flag
   - have your system administrator add LIBDIR to '/etc/ld.so.conf'

See any operating system documentation about shared libraries for
more information, such as the ld(1) and ld.so(8) manual pages.
----------------------------------------------------------------------
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
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./jenkins/jenkins.sh: line 365: 2090828 Segmentation fault      $MATLAB_PATH/bin/matlab -nodisplay -nosplash -r "addpath ${ISSM_DIR}/src/m/dev; devpath; addpath ${ISSM_DIR}/nightlylog; matlab_run$i" &> ${ISSM_DIR}/nightlylog/matlab_log$i.log
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+++ Running case: MATLAB-4001 
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--2024-07-29 03:45:50--  https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz
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MITgcm-checkpoint68i/model/src/write_pickup.F
MITgcm-checkpoint68i/model/src/write_state.F
MITgcm-checkpoint68i/optim/
MITgcm-checkpoint68i/optim/Makefile
MITgcm-checkpoint68i/optim/Makefile_macosx
MITgcm-checkpoint68i/optim/README.md
MITgcm-checkpoint68i/optim/blas1.h
MITgcm-checkpoint68i/optim/data.ctrl
MITgcm-checkpoint68i/optim/data.ecco
MITgcm-checkpoint68i/optim/data.optim
MITgcm-checkpoint68i/optim/flowchart_optim.txt
MITgcm-checkpoint68i/optim/minimization.h
MITgcm-checkpoint68i/optim/optim.h
MITgcm-checkpoint68i/optim/optim_initmod.F
MITgcm-checkpoint68i/optim/optim_main.F
MITgcm-checkpoint68i/optim/optim_numbmod.F
MITgcm-checkpoint68i/optim/optim_readdata.F
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MITgcm-checkpoint68i/optim/optim_writedata.F
MITgcm-checkpoint68i/optim/simul.F
MITgcm-checkpoint68i/optim/to_do.txt
MITgcm-checkpoint68i/optim/utils.F
MITgcm-checkpoint68i/optim/xerbla.F
MITgcm-checkpoint68i/pkg/
MITgcm-checkpoint68i/pkg/admtlm/
MITgcm-checkpoint68i/pkg/admtlm/ADMTLM_OPTIONS.h
MITgcm-checkpoint68i/pkg/admtlm/admtlm_bypassad.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_driver.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd2model.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_init_fixed.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_map.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_metric.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_model2dsvd.F
MITgcm-checkpoint68i/pkg/admtlm/arpack_debug.h
MITgcm-checkpoint68i/pkg/aim_v23/
MITgcm-checkpoint68i/pkg/aim_v23/AIM2DYN.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_CO2.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_FFIELDS.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_GRID.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_OPTIONS.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_PARAMS.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_SIZE.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_TAVE.h
MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2dyn.F
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MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics.F
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MITgcm-checkpoint68i/pkg/aim_v23/aim_surf_bc.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_tendency_apply.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_v23_description.tex
MITgcm-checkpoint68i/pkg/aim_v23/aim_write_local.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_write_phys.F
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MITgcm-checkpoint68i/pkg/aim_v23/com_cnvcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_forcing.h
MITgcm-checkpoint68i/pkg/aim_v23/com_forcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_lsccon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_physcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_physvar.h
MITgcm-checkpoint68i/pkg/aim_v23/com_radcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_radvar.h
MITgcm-checkpoint68i/pkg/aim_v23/com_sflcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_vdicon.h
MITgcm-checkpoint68i/pkg/aim_v23/phy_const.h
MITgcm-checkpoint68i/pkg/aim_v23/phy_convmf.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_driver.F
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MITgcm-checkpoint68i/pkg/atm2d/AGRID.h
MITgcm-checkpoint68i/pkg/atm2d/ATM2D_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm2d/ATM2D_VARS.h
MITgcm-checkpoint68i/pkg/atm2d/ATMSIZE.h
MITgcm-checkpoint68i/pkg/atm2d/CPLIDS.h
MITgcm-checkpoint68i/pkg/atm2d/DRIVER.h
MITgcm-checkpoint68i/pkg/atm2d/OCNIDS.h
MITgcm-checkpoint68i/pkg/atm2d/OCNSIZE.h
MITgcm-checkpoint68i/pkg/atm2d/OCNVARS.h
MITgcm-checkpoint68i/pkg/atm2d/accept_component_registrations.F
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MITgcm-checkpoint68i/pkg/atm_common/ATM_COMMON_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm_common/atm_diagnostics_init.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/
MITgcm-checkpoint68i/pkg/atm_compon_interf/ATMCPL.h
MITgcm-checkpoint68i/pkg/atm_compon_interf/ATM_CPL_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm_compon_interf/CPL_PARAMS.h
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_apply_import.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_check_cplconfig.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_cpl_read_pickup.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_export_atmconfig.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_export_fields.F
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MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_exch_configs.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_export_import_data.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_import_cplparms.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_ini_vars.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_init.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_init_fixed.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_output.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_readparms.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_register.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_write_pickup.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/ATMIDS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/ATMVARS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPLIDS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPL_MAP2GRIDS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPL_PARAMS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPP_EEOPTIONS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPP_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/NOTES
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/OCNIDS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/OCNVARS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/README
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/accept_component_registrations.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/atm_to_ocn_maprunoff.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/atm_to_ocn_mapxyr8.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/coupler.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_check_cplconfig.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_init_atm_vars.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_init_ocn_vars.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_read_params.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_recv_atm_atmconfig.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_recv_atm_fields.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_recv_ocn_fields.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_recv_ocn_ocnconfig.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_register_atm.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_register_ocn.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_atm_cplparms.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_atm_fields.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_atm_ocnconfig.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_ocn_atmconfig.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_ocn_cplparms.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_ocn_fields.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/exch_component_configs.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/initialise.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/mds_byteswap.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/ocn_to_atm_mapxyr8.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/set_runoffmap.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/setdir.c
MITgcm-checkpoint68i/pkg/atm_phys/
MITgcm-checkpoint68i/pkg/atm_phys/ATM_PHYS_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm_phys/ATM_PHYS_PARAMS.h
MITgcm-checkpoint68i/pkg/atm_phys/ATM_PHYS_VARS.h
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_check.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_diagnostics_init.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_driver.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_dyn2phys.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_init_fixed.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_init_varia.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_read_pickup.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_readparms.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_tendency_apply.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_write_pickup.F
MITgcm-checkpoint68i/pkg/atm_phys/constants_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/dargan_bettsmiller_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/diffusivity_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/gcm_params_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/lscale_cond_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/mixed_layer_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/monin_obukhov_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/my25_turb_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/atm_phys_driver.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/constants.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/diffusivity.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/diffusivity.tech.ps
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/flux_exchange.tech.ps
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/lscale_cond.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/monin_obukhov.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/monin_obukhov.tech.ps
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/my25_turb.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/shallow_conv.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/vert_diff.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/vert_diff.tech.ps
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/vert_turb_driver.html
MITgcm-checkpoint68i/pkg/atm_phys/radiation_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/shallow_conv_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/simple_sat_vapor_pres_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/surface_flux_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/vert_diff_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/vert_turb_driver_mod.F90
MITgcm-checkpoint68i/pkg/autodiff/
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_MYFIELDS.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_OPTIONS.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_PARAMS.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_STORE.h
MITgcm-checkpoint68i/pkg/autodiff/ECCO_CPPOPTIONS.h
MITgcm-checkpoint68i/pkg/autodiff/README
MITgcm-checkpoint68i/pkg/autodiff/active_file.F
MITgcm-checkpoint68i/pkg/autodiff/active_file.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_ad.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_control.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_control.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_control_slice.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_g.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen_ad.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen_g.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc_ad.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc_g.F
MITgcm-checkpoint68i/pkg/autodiff/adautodiff_whtapeio_sync.F
MITgcm-checkpoint68i/pkg/autodiff/adcommon.h
MITgcm-checkpoint68i/pkg/autodiff/addamp_adj.F
MITgcm-checkpoint68i/pkg/autodiff/addummy_for_etan.F
MITgcm-checkpoint68i/pkg/autodiff/addummy_in_dynamics.F
MITgcm-checkpoint68i/pkg/autodiff/addummy_in_stepping.F
MITgcm-checkpoint68i/pkg/autodiff/adopen_adclose.F
MITgcm-checkpoint68i/pkg/autodiff/adread_adwrite.F
MITgcm-checkpoint68i/pkg/autodiff/adread_adwrite_i.F
MITgcm-checkpoint68i/pkg/autodiff/adzero_adj.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_ad_diff.list
MITgcm-checkpoint68i/pkg/autodiff/autodiff_check.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_findunit.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode.flow
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set_ad.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set_g.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset_ad.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset_g.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_ini_model_io.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_init_varia.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_readparms.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_restore.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_store.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_whtapeio_sync.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_whtapeio_sync.flow
MITgcm-checkpoint68i/pkg/autodiff/cg2d.flow
MITgcm-checkpoint68i/pkg/autodiff/cg2d_mad.F
MITgcm-checkpoint68i/pkg/autodiff/check_lev1_dir_forcing.h
MITgcm-checkpoint68i/pkg/autodiff/check_lev1_dir_ocephys.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint.flow
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev1_directives.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev1_template.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev2_directives.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev3_directives.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev4_directives.h
MITgcm-checkpoint68i/pkg/autodiff/common.flow
MITgcm-checkpoint68i/pkg/autodiff/copy_ad_uv_outp.F
MITgcm-checkpoint68i/pkg/autodiff/copy_advar_outp.F
MITgcm-checkpoint68i/pkg/autodiff/damp_adj.F
MITgcm-checkpoint68i/pkg/autodiff/damp_adj.flow
MITgcm-checkpoint68i/pkg/autodiff/dummy_for_etan.F
MITgcm-checkpoint68i/pkg/autodiff/dummy_for_etan.flow
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_dynamics.F
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_dynamics.flow
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_stepping.F
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_stepping.flow
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xy.F
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xy_uv.F
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xyz.F
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xyz_uv.F
MITgcm-checkpoint68i/pkg/autodiff/g_common.h
MITgcm-checkpoint68i/pkg/autodiff/g_dummy_for_etan.F
MITgcm-checkpoint68i/pkg/autodiff/g_dummy_in_dynamics.F
MITgcm-checkpoint68i/pkg/autodiff/g_dummy_in_stepping.F
MITgcm-checkpoint68i/pkg/autodiff/global_max_ad.F
MITgcm-checkpoint68i/pkg/autodiff/global_max_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/global_sum_ad.F
MITgcm-checkpoint68i/pkg/autodiff/global_sum_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/global_sum_tile_ad.F
MITgcm-checkpoint68i/pkg/autodiff/initialisation.flow
MITgcm-checkpoint68i/pkg/autodiff/model_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction.F
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction.flow
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction_ad.F
MITgcm-checkpoint68i/pkg/autodiff/system.flow
MITgcm-checkpoint68i/pkg/autodiff/tamc.h
MITgcm-checkpoint68i/pkg/autodiff/zero_adj.F
MITgcm-checkpoint68i/pkg/autodiff/zero_adj.flow
MITgcm-checkpoint68i/pkg/bbl/
MITgcm-checkpoint68i/pkg/bbl/BBL.h
MITgcm-checkpoint68i/pkg/bbl/BBL_OPTIONS.h
MITgcm-checkpoint68i/pkg/bbl/bbl_ad.flow
MITgcm-checkpoint68i/pkg/bbl/bbl_ad_diff.list
MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rho.F
MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rhs.F
MITgcm-checkpoint68i/pkg/bbl/bbl_check.F
MITgcm-checkpoint68i/pkg/bbl/bbl_description.tex
MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_state.F
MITgcm-checkpoint68i/pkg/bbl/bbl_init_fixed.F
MITgcm-checkpoint68i/pkg/bbl/bbl_init_varia.F
MITgcm-checkpoint68i/pkg/bbl/bbl_read_pickup.F
MITgcm-checkpoint68i/pkg/bbl/bbl_readparms.F
MITgcm-checkpoint68i/pkg/bbl/bbl_tendency_apply.F
MITgcm-checkpoint68i/pkg/bbl/bbl_write_pickup.F
MITgcm-checkpoint68i/pkg/bling/
MITgcm-checkpoint68i/pkg/bling/BLING_LOAD.h
MITgcm-checkpoint68i/pkg/bling/BLING_OPTIONS.h
MITgcm-checkpoint68i/pkg/bling/BLING_VARS.h
MITgcm-checkpoint68i/pkg/bling/CHANGES_TO_BLING.txt
MITgcm-checkpoint68i/pkg/bling/bling_ad.flow
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_diff.list
MITgcm-checkpoint68i/pkg/bling/bling_airseaflux.F
MITgcm-checkpoint68i/pkg/bling/bling_bio.F
MITgcm-checkpoint68i/pkg/bling/bling_bio_nitrogen.F
MITgcm-checkpoint68i/pkg/bling/bling_carbon_chem.F
MITgcm-checkpoint68i/pkg/bling/bling_carbonate_init.F
MITgcm-checkpoint68i/pkg/bling/bling_carbonate_sys.F
MITgcm-checkpoint68i/pkg/bling/bling_description.txt
MITgcm-checkpoint68i/pkg/bling/bling_diagnostics_init.F
MITgcm-checkpoint68i/pkg/bling/bling_fields_load.F
MITgcm-checkpoint68i/pkg/bling/bling_ini_forcing.F
MITgcm-checkpoint68i/pkg/bling/bling_init_fixed.F
MITgcm-checkpoint68i/pkg/bling/bling_init_varia.F
MITgcm-checkpoint68i/pkg/bling/bling_light.F
MITgcm-checkpoint68i/pkg/bling/bling_main.F
MITgcm-checkpoint68i/pkg/bling/bling_min_val.F
MITgcm-checkpoint68i/pkg/bling/bling_mixedlayer.F
MITgcm-checkpoint68i/pkg/bling/bling_read_pickup.F
MITgcm-checkpoint68i/pkg/bling/bling_readparms.F
MITgcm-checkpoint68i/pkg/bling/bling_sgs.F
MITgcm-checkpoint68i/pkg/bling/bling_solvesaphe.F
MITgcm-checkpoint68i/pkg/bling/bling_tr_register.F
MITgcm-checkpoint68i/pkg/bling/bling_write_pickup.F
MITgcm-checkpoint68i/pkg/bulk_force/
MITgcm-checkpoint68i/pkg/bulk_force/BULKF.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_CONSERV.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_INT.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_PARAMS.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_TAVE.h
MITgcm-checkpoint68i/pkg/bulk_force/BULK_FORCE_OPTIONS.h
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_ave.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_fields_load.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_flux_adjust.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_forcing.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_aim.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lanl.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lay.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_init_varia.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_output.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_readparms.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_sh2rh_aim.F
MITgcm-checkpoint68i/pkg/cal/
MITgcm-checkpoint68i/pkg/cal/CAL_OPTIONS.h
MITgcm-checkpoint68i/pkg/cal/cal.h
MITgcm-checkpoint68i/pkg/cal/cal_ad_diff.list
MITgcm-checkpoint68i/pkg/cal/cal_addtime.F
MITgcm-checkpoint68i/pkg/cal/cal_checkdate.F
MITgcm-checkpoint68i/pkg/cal/cal_compdates.F
MITgcm-checkpoint68i/pkg/cal/cal_convdate.F
MITgcm-checkpoint68i/pkg/cal/cal_copydate.F
MITgcm-checkpoint68i/pkg/cal/cal_daysformonth.F
MITgcm-checkpoint68i/pkg/cal/cal_dayspermonth.F
MITgcm-checkpoint68i/pkg/cal/cal_description.tex
MITgcm-checkpoint68i/pkg/cal/cal_fulldate.F
MITgcm-checkpoint68i/pkg/cal/cal_getdate.F
MITgcm-checkpoint68i/pkg/cal/cal_getmonthsrec.F
MITgcm-checkpoint68i/pkg/cal/cal_init_fixed.F
MITgcm-checkpoint68i/pkg/cal/cal_intdays.F
MITgcm-checkpoint68i/pkg/cal/cal_intmonths.F
MITgcm-checkpoint68i/pkg/cal/cal_intyears.F
MITgcm-checkpoint68i/pkg/cal/cal_isleap.F
MITgcm-checkpoint68i/pkg/cal/cal_monthsforyear.F
MITgcm-checkpoint68i/pkg/cal/cal_monthsperyear.F
MITgcm-checkpoint68i/pkg/cal/cal_numints.F
MITgcm-checkpoint68i/pkg/cal/cal_printdate.F
MITgcm-checkpoint68i/pkg/cal/cal_printerror.F
MITgcm-checkpoint68i/pkg/cal/cal_readparms.F
MITgcm-checkpoint68i/pkg/cal/cal_set.F
MITgcm-checkpoint68i/pkg/cal/cal_stepsforday.F
MITgcm-checkpoint68i/pkg/cal/cal_stepsperday.F
MITgcm-checkpoint68i/pkg/cal/cal_subdates.F
MITgcm-checkpoint68i/pkg/cal/cal_summary.F
MITgcm-checkpoint68i/pkg/cal/cal_time2dump.F
MITgcm-checkpoint68i/pkg/cal/cal_timeinterval.F
MITgcm-checkpoint68i/pkg/cal/cal_timepassed.F
MITgcm-checkpoint68i/pkg/cal/cal_timestamp.F
MITgcm-checkpoint68i/pkg/cal/cal_toseconds.F
MITgcm-checkpoint68i/pkg/cal/cal_weekday.F
MITgcm-checkpoint68i/pkg/cd_code/
MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_OPTIONS.h
MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_VARS.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad.flow
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_diff.list
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ini_vars.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_init_fixed.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_read_pickup.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_scheme.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_write_pickup.F
MITgcm-checkpoint68i/pkg/cfc/
MITgcm-checkpoint68i/pkg/cfc/CFC.h
MITgcm-checkpoint68i/pkg/cfc/CFC_ATMOS.h
MITgcm-checkpoint68i/pkg/cfc/CFC_SIZE.h
MITgcm-checkpoint68i/pkg/cfc/cfc11_forcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc11_surfforcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc12_forcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc12_surfforcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_diff.list
MITgcm-checkpoint68i/pkg/cfc/cfc_atmos.F
MITgcm-checkpoint68i/pkg/cfc/cfc_check.F
MITgcm-checkpoint68i/pkg/cfc/cfc_fields_load.F
MITgcm-checkpoint68i/pkg/cfc/cfc_param.F
MITgcm-checkpoint68i/pkg/cfc/cfc_readparms.F
MITgcm-checkpoint68i/pkg/cfc/cfc_tr_register.F
MITgcm-checkpoint68i/pkg/cheapaml/
MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML.h
MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML_OPTIONS.h
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_calc_rhs.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_coare3_flux.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_copy_edges.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_diagnostics_init.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_fields_load.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_fixed.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_varia.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_lanl_flux.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_read_pickup.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_readparms.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_seaice.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_timestep.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_write_pickup.F
MITgcm-checkpoint68i/pkg/chronos/
MITgcm-checkpoint68i/pkg/chronos/chronos.F
MITgcm-checkpoint68i/pkg/chronos/chronos.h
MITgcm-checkpoint68i/pkg/compon_communic/
MITgcm-checkpoint68i/pkg/compon_communic/CPLR_SIG.h
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/generate_tag.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_init.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_tile_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_init.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_tile_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_all_check.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2dbl.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2int.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2real.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_dbl2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init1.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2a.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2b.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_initcomp.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_int2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_match_comp.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_real2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_sortranks.F
MITgcm-checkpoint68i/pkg/cost/
MITgcm-checkpoint68i/pkg/cost/COST_OPTIONS.h
MITgcm-checkpoint68i/pkg/cost/adcost.h
MITgcm-checkpoint68i/pkg/cost/cost.h
MITgcm-checkpoint68i/pkg/cost/cost_accumulate_mean.F
MITgcm-checkpoint68i/pkg/cost/cost_ad.flow
MITgcm-checkpoint68i/pkg/cost/cost_ad_diff.list
MITgcm-checkpoint68i/pkg/cost/cost_atlantic_heat.F
MITgcm-checkpoint68i/pkg/cost/cost_check.F
MITgcm-checkpoint68i/pkg/cost/cost_dependent_init.F
MITgcm-checkpoint68i/pkg/cost/cost_depth.F
MITgcm-checkpoint68i/pkg/cost/cost_final.F
MITgcm-checkpoint68i/pkg/cost/cost_final_restore.F
MITgcm-checkpoint68i/pkg/cost/cost_final_store.F
MITgcm-checkpoint68i/pkg/cost/cost_init_varia.F
MITgcm-checkpoint68i/pkg/cost/cost_readparms.F
MITgcm-checkpoint68i/pkg/cost/cost_state_final.F
MITgcm-checkpoint68i/pkg/cost/cost_test.F
MITgcm-checkpoint68i/pkg/cost/cost_tile.F
MITgcm-checkpoint68i/pkg/cost/cost_tracer.F
MITgcm-checkpoint68i/pkg/cost/cost_vector.F
MITgcm-checkpoint68i/pkg/cost/g_cost.h
MITgcm-checkpoint68i/pkg/ctrl/
MITgcm-checkpoint68i/pkg/ctrl/CTRL_FIELDS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_GENARR.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_OBCS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_OPTIONS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_SIZE.h
MITgcm-checkpoint68i/pkg/ctrl/adctrl_bound.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_diff.list
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.flow
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound_tl.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_check.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_driver.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_depth_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_description.tex
MITgcm-checkpoint68i/pkg/ctrl/ctrl_dummy.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen_rec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_mask.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcse.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsn.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcss.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsw.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getrec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_hfacc_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_ctrlvar.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_obcs_variables.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_rec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_variables.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_wet.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_local_params.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_forcing.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_genarr.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_gentim2d.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_ecco.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_genarr.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gentim2d.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_pack.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_readparms.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_fname.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_smooth.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_summary.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_swapffields.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_toolbox.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_unpack.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_weights.h
MITgcm-checkpoint68i/pkg/ctrl/optim.h
MITgcm-checkpoint68i/pkg/ctrl/optim_readparms.F
MITgcm-checkpoint68i/pkg/debug/
MITgcm-checkpoint68i/pkg/debug/DEBUG_OPTIONS.h
MITgcm-checkpoint68i/pkg/debug/chksum_tiled.F
MITgcm-checkpoint68i/pkg/debug/debug_ad.flow
MITgcm-checkpoint68i/pkg/debug/debug_call.F
MITgcm-checkpoint68i/pkg/debug/debug_cs_corner_uv.F
MITgcm-checkpoint68i/pkg/debug/debug_enter.F
MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rl.F
MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rs.F
MITgcm-checkpoint68i/pkg/debug/debug_leave.F
MITgcm-checkpoint68i/pkg/debug/debug_msg.F
MITgcm-checkpoint68i/pkg/debug/debug_stats_rl.F
MITgcm-checkpoint68i/pkg/debug/debug_stats_rs.F
MITgcm-checkpoint68i/pkg/debug/fill_in_corners_rl.F
MITgcm-checkpoint68i/pkg/debug/write_fullarray_rl.F
MITgcm-checkpoint68i/pkg/debug/write_fullarray_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_CALC.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGSTATS_REGIONS.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAG_OPTIONS.h
MITgcm-checkpoint68i/pkg/diagnostics/diag_calc_psivel.F
MITgcm-checkpoint68i/pkg/diagnostics/diag_cg2d.F
MITgcm-checkpoint68i/pkg/diagnostics/diag_vegtile_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad.flow
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad_diff.list
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_addtolist.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_calc_phivel.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_check.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_clear.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_field.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_state.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fract_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ini_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_early.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_fixed.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_varia.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_p2p.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_vert.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_is_on.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_list_check.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_main_init.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_mnc_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_read_pickup.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_readparms.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_levels.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_pointers.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_setdiag.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_status_error.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_sum_levels.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_summary.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_switch_onoff.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_utils.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_adj.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_pickup.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ascii_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_clear.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_close_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_global.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ini_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_local.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_mnc_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_others_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_output.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_pointers.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_regions.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_setdiag.F
MITgcm-checkpoint68i/pkg/dic/
MITgcm-checkpoint68i/pkg/dic/DIC_ATMOS.h
MITgcm-checkpoint68i/pkg/dic/DIC_COST.h
MITgcm-checkpoint68i/pkg/dic/DIC_CTRL.h
MITgcm-checkpoint68i/pkg/dic/DIC_LOAD.h
MITgcm-checkpoint68i/pkg/dic/DIC_OPTIONS.h
MITgcm-checkpoint68i/pkg/dic/DIC_VARS.h
MITgcm-checkpoint68i/pkg/dic/alk_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/bio_export.F
MITgcm-checkpoint68i/pkg/dic/calcite_saturation.F
MITgcm-checkpoint68i/pkg/dic/car_flux.F
MITgcm-checkpoint68i/pkg/dic/car_flux_omega_top.F
MITgcm-checkpoint68i/pkg/dic/carbon_chem.F
MITgcm-checkpoint68i/pkg/dic/dic_ad.flow
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_diff.list
MITgcm-checkpoint68i/pkg/dic/dic_atmos.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_diags.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_forcing.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_init.F
MITgcm-checkpoint68i/pkg/dic/dic_cost.F
MITgcm-checkpoint68i/pkg/dic/dic_diagnostics_init.F
MITgcm-checkpoint68i/pkg/dic/dic_fields_load.F
MITgcm-checkpoint68i/pkg/dic/dic_fields_update.F
MITgcm-checkpoint68i/pkg/dic/dic_ini_atmos.F
MITgcm-checkpoint68i/pkg/dic/dic_ini_forcing.F
MITgcm-checkpoint68i/pkg/dic/dic_init_fixed.F
MITgcm-checkpoint68i/pkg/dic/dic_init_varia.F
MITgcm-checkpoint68i/pkg/dic/dic_mnc_init.F
MITgcm-checkpoint68i/pkg/dic/dic_read_co2_pickup.F
MITgcm-checkpoint68i/pkg/dic/dic_read_pickup.F
MITgcm-checkpoint68i/pkg/dic/dic_readparms.F
MITgcm-checkpoint68i/pkg/dic/dic_set_control.F
MITgcm-checkpoint68i/pkg/dic/dic_solvesaphe.F
MITgcm-checkpoint68i/pkg/dic/dic_store_fluxco2.F
MITgcm-checkpoint68i/pkg/dic/dic_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/dic_surfforcing_init.F
MITgcm-checkpoint68i/pkg/dic/dic_tr_register.F
MITgcm-checkpoint68i/pkg/dic/dic_write_pickup.F
MITgcm-checkpoint68i/pkg/dic/fe_chem.F
MITgcm-checkpoint68i/pkg/dic/insol.F
MITgcm-checkpoint68i/pkg/dic/o2_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/phos_flux.F
MITgcm-checkpoint68i/pkg/down_slope/
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_OPTIONS.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_PARAMS.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_SIZE.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_VARS.h
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_ad_diff.list
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_apply.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_flow.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_rho.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_diagnostics_init.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_fixed.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_varia.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_readparms.F
MITgcm-checkpoint68i/pkg/ebm/
MITgcm-checkpoint68i/pkg/ebm/EBM.h
MITgcm-checkpoint68i/pkg/ebm/EBM_OPTIONS.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_diff.list
MITgcm-checkpoint68i/pkg/ebm/ebm_area_t.F
MITgcm-checkpoint68i/pkg/ebm/ebm_atmosphere.F
MITgcm-checkpoint68i/pkg/ebm/ebm_driver.F
MITgcm-checkpoint68i/pkg/ebm/ebm_ini_vars.F
MITgcm-checkpoint68i/pkg/ebm/ebm_load_climatology.F
MITgcm-checkpoint68i/pkg/ebm/ebm_readparms.F
MITgcm-checkpoint68i/pkg/ebm/ebm_wind_perturb.F
MITgcm-checkpoint68i/pkg/ebm/ebm_zonalmean.F
MITgcm-checkpoint68i/pkg/ecco/
MITgcm-checkpoint68i/pkg/ecco/ECCO.h
MITgcm-checkpoint68i/pkg/ecco/ECCO_OPTIONS.h
MITgcm-checkpoint68i/pkg/ecco/ECCO_SIZE.h
MITgcm-checkpoint68i/pkg/ecco/cost_averagesfields.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesflags.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesgeneric.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesinit.F
MITgcm-checkpoint68i/pkg/ecco/cost_bp_read.F
MITgcm-checkpoint68i/pkg/ecco/cost_forcing.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencal.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_all.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_assignperiod.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_boxmean.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_bpv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_customize.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_glbmean.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_moc.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_seaicev4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sshv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sstv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_transp.F
MITgcm-checkpoint68i/pkg/ecco/cost_generic.F
MITgcm-checkpoint68i/pkg/ecco/cost_genread.F
MITgcm-checkpoint68i/pkg/ecco/cost_hyd.F
MITgcm-checkpoint68i/pkg/ecco/cost_internal_params.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcs.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcs_ageos.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcse.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsn.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcss.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsvol.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsw.F
MITgcm-checkpoint68i/pkg/ecco/cost_sla_read.F
MITgcm-checkpoint68i/pkg/ecco/cost_sla_read_yd.F
MITgcm-checkpoint68i/pkg/ecco/cost_ssh.F
MITgcm-checkpoint68i/pkg/ecco/ecco_ad.flow
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_diff.list
MITgcm-checkpoint68i/pkg/ecco/ecco_check.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost.h
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_driver.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_final.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_barfiles.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_fixed.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_varia.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_summary.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_weights.F
MITgcm-checkpoint68i/pkg/ecco/ecco_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ecco/ecco_init_fixed.F
MITgcm-checkpoint68i/pkg/ecco/ecco_init_varia.F
MITgcm-checkpoint68i/pkg/ecco/ecco_local_params.h
MITgcm-checkpoint68i/pkg/ecco/ecco_phys.F
MITgcm-checkpoint68i/pkg/ecco/ecco_readparms.F
MITgcm-checkpoint68i/pkg/ecco/ecco_summary.F
MITgcm-checkpoint68i/pkg/ecco/ecco_toolbox.F
MITgcm-checkpoint68i/pkg/ecco/stergloh_output.F
MITgcm-checkpoint68i/pkg/embed_files/
MITgcm-checkpoint68i/pkg/embed_files/EMBED_FILES_OPTIONS.h
MITgcm-checkpoint68i/pkg/embed_files/README.txt
MITgcm-checkpoint68i/pkg/embed_files/decode_files.c
MITgcm-checkpoint68i/pkg/embed_files/embed_files_init.F
MITgcm-checkpoint68i/pkg/exch2/
MITgcm-checkpoint68i/pkg/exch2/Makefile
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_BUFFER.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_PARAMS.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_SIZE.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_TOPOLOGY.h
MITgcm-checkpoint68i/pkg/exch2/W2_OPTIONS.h
MITgcm-checkpoint68i/pkg/exch2/exch2.flow
MITgcm-checkpoint68i/pkg/exch2/exch2_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_diff.list
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_check_depths.F
MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_get_scal_bounds.F
MITgcm-checkpoint68i/pkg/exch2/exch2_get_uv_bounds.F
MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube_ad.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube_ad.template
MITgcm-checkpoint68i/pkg/exch2/exch2_s3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_sm_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_agrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_bgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_cgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_dgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_z_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/w2_cumulsum_z_tile.F
MITgcm-checkpoint68i/pkg/exch2/w2_e2setup.F
MITgcm-checkpoint68i/pkg/exch2/w2_eeboot.F
MITgcm-checkpoint68i/pkg/exch2/w2_map_procs.F
MITgcm-checkpoint68i/pkg/exch2/w2_print_comm_sequence.F
MITgcm-checkpoint68i/pkg/exch2/w2_print_e2setup.F
MITgcm-checkpoint68i/pkg/exch2/w2_readparms.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_cs6_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_f2f_index.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_gen_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_map_cumsum.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_map_tiles.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_myown_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_single_facet.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_tile2tiles.F
MITgcm-checkpoint68i/pkg/exf/
MITgcm-checkpoint68i/pkg/exf/EXF_CONSTANTS.h
MITgcm-checkpoint68i/pkg/exf/EXF_FIELDS.h
MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_PARAM.h
MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_SIZE.h
MITgcm-checkpoint68i/pkg/exf/EXF_OPTIONS.h
MITgcm-checkpoint68i/pkg/exf/EXF_PARAM.h
MITgcm-checkpoint68i/pkg/exf/TODO.txt
MITgcm-checkpoint68i/pkg/exf/exf_ad.flow
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_diff.list
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots.F
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots__g.F
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots_ad.F
MITgcm-checkpoint68i/pkg/exf/exf_bulkformulae.F
MITgcm-checkpoint68i/pkg/exf/exf_check.F
MITgcm-checkpoint68i/pkg/exf/exf_check_range.F
MITgcm-checkpoint68i/pkg/exf/exf_description.tex
MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_init.F
MITgcm-checkpoint68i/pkg/exf/exf_filter_rl.F
MITgcm-checkpoint68i/pkg/exf/exf_getclim.F
MITgcm-checkpoint68i/pkg/exf/exf_getffield_start.F
MITgcm-checkpoint68i/pkg/exf/exf_getffieldrec.F
MITgcm-checkpoint68i/pkg/exf/exf_getffields.F
MITgcm-checkpoint68i/pkg/exf/exf_getfield_start.F
MITgcm-checkpoint68i/pkg/exf/exf_getforcing.F
MITgcm-checkpoint68i/pkg/exf/exf_getmonthsrec.F
MITgcm-checkpoint68i/pkg/exf/exf_getsurfacefluxes.F
MITgcm-checkpoint68i/pkg/exf/exf_getyearlyfieldname.F
MITgcm-checkpoint68i/pkg/exf/exf_init_fixed.F
MITgcm-checkpoint68i/pkg/exf/exf_init_fld.F
MITgcm-checkpoint68i/pkg/exf/exf_init_interp.F
MITgcm-checkpoint68i/pkg/exf/exf_init_varia.F
MITgcm-checkpoint68i/pkg/exf/exf_interp.F
MITgcm-checkpoint68i/pkg/exf/exf_interp_read.F
MITgcm-checkpoint68i/pkg/exf/exf_interp_uv.F
MITgcm-checkpoint68i/pkg/exf/exf_interpolate.F
MITgcm-checkpoint68i/pkg/exf/exf_mapfields.F
MITgcm-checkpoint68i/pkg/exf/exf_monitor.F
MITgcm-checkpoint68i/pkg/exf/exf_monitor_ad.F
MITgcm-checkpoint68i/pkg/exf/exf_radiation.F
MITgcm-checkpoint68i/pkg/exf/exf_readparms.F
MITgcm-checkpoint68i/pkg/exf/exf_set_fld.F
MITgcm-checkpoint68i/pkg/exf/exf_set_gen.F
MITgcm-checkpoint68i/pkg/exf/exf_set_obcs.F
MITgcm-checkpoint68i/pkg/exf/exf_set_uv.F
MITgcm-checkpoint68i/pkg/exf/exf_summary.F
MITgcm-checkpoint68i/pkg/exf/exf_swapffields.F
MITgcm-checkpoint68i/pkg/exf/exf_weight_sfx_diags.F
MITgcm-checkpoint68i/pkg/exf/exf_wind.F
MITgcm-checkpoint68i/pkg/exf/exf_zenithangle.F
MITgcm-checkpoint68i/pkg/exf/exf_zenithangle_table.F
MITgcm-checkpoint68i/pkg/fizhi/
MITgcm-checkpoint68i/pkg/fizhi/AtoC.F
MITgcm-checkpoint68i/pkg/fizhi/CtoA.F
MITgcm-checkpoint68i/pkg/fizhi/FIZHI_OPTIONS.h
MITgcm-checkpoint68i/pkg/fizhi/cah-dat.h
MITgcm-checkpoint68i/pkg/fizhi/cai-dat.h
MITgcm-checkpoint68i/pkg/fizhi/chronos.h
MITgcm-checkpoint68i/pkg/fizhi/co2-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/do_fizhi.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_SHP.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_SIZE.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_alarms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_chemistry_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_clockstuff.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagalarms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagnostics_init.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_driver.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_earth_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_fillnegs.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_gwdrag.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_chem.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_fixed.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vars.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_veg.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vegsurftiles.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_io_comms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_SIZE.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_lsm.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_lwrad.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_mnc_init.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_moist.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_mpistuff.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_ocean_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_rayleigh.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_read_pickup.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_readparms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_readwrite_vegtiles.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_step_diag.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_swrad.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_tendency_apply.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_turb.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_update_time.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_utils.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_wrapper.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_datetime.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_pickup.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_state.F
MITgcm-checkpoint68i/pkg/fizhi/getcon.F
MITgcm-checkpoint68i/pkg/fizhi/getpwhere.F
MITgcm-checkpoint68i/pkg/fizhi/h2o-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/o3-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/sibber.h
MITgcm-checkpoint68i/pkg/fizhi/slprs.F
MITgcm-checkpoint68i/pkg/fizhi/snwmid.h
MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_corr.F
MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_fg.F
MITgcm-checkpoint68i/pkg/fizhi/step_physics.F
MITgcm-checkpoint68i/pkg/fizhi/update_chemistry_exports.F
MITgcm-checkpoint68i/pkg/fizhi/update_earth_exports.F
MITgcm-checkpoint68i/pkg/fizhi/update_ocean_exports.F
MITgcm-checkpoint68i/pkg/flt/
MITgcm-checkpoint68i/pkg/flt/FLT.h
MITgcm-checkpoint68i/pkg/flt/FLT_BUFF.h
MITgcm-checkpoint68i/pkg/flt/FLT_OPTIONS.h
MITgcm-checkpoint68i/pkg/flt/FLT_SIZE.h
MITgcm-checkpoint68i/pkg/flt/README.flt
MITgcm-checkpoint68i/pkg/flt/exch2_recv_get_vec.F
MITgcm-checkpoint68i/pkg/flt/exch2_send_put_vec.F
MITgcm-checkpoint68i/pkg/flt/exch_recv_get_vec.F
MITgcm-checkpoint68i/pkg/flt/exch_send_put_vec.F
MITgcm-checkpoint68i/pkg/flt/flt_down.F
MITgcm-checkpoint68i/pkg/flt/flt_exch2.F
MITgcm-checkpoint68i/pkg/flt/flt_exchg.F
MITgcm-checkpoint68i/pkg/flt/flt_init_fixed.F
MITgcm-checkpoint68i/pkg/flt/flt_init_varia.F
MITgcm-checkpoint68i/pkg/flt/flt_interp_linear.F
MITgcm-checkpoint68i/pkg/flt/flt_main.F
MITgcm-checkpoint68i/pkg/flt/flt_mapping.F
MITgcm-checkpoint68i/pkg/flt/flt_readparms.F
MITgcm-checkpoint68i/pkg/flt/flt_runga2.F
MITgcm-checkpoint68i/pkg/flt/flt_runga4.F
MITgcm-checkpoint68i/pkg/flt/flt_traj.F
MITgcm-checkpoint68i/pkg/flt/flt_up.F
MITgcm-checkpoint68i/pkg/flt/flt_write_pickup.F
MITgcm-checkpoint68i/pkg/frazil/
MITgcm-checkpoint68i/pkg/frazil/FRAZIL.h
MITgcm-checkpoint68i/pkg/frazil/FRAZIL_OPTIONS.h
MITgcm-checkpoint68i/pkg/frazil/frazil_ad.flow
MITgcm-checkpoint68i/pkg/frazil/frazil_ad_diff.list
MITgcm-checkpoint68i/pkg/frazil/frazil_calc_rhs.F
MITgcm-checkpoint68i/pkg/frazil/frazil_description.tex
MITgcm-checkpoint68i/pkg/frazil/frazil_diagnostics_init.F
MITgcm-checkpoint68i/pkg/frazil/frazil_init_fixed.F
MITgcm-checkpoint68i/pkg/frazil/frazil_init_varia.F
MITgcm-checkpoint68i/pkg/frazil/frazil_tendency_apply.F
MITgcm-checkpoint68i/pkg/gchem/
MITgcm-checkpoint68i/pkg/gchem/GCHEM.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_FIELDS.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_OPTIONS.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_SIZE.h
MITgcm-checkpoint68i/pkg/gchem/gchem_ad_diff.list
MITgcm-checkpoint68i/pkg/gchem/gchem_add_tendency.F
MITgcm-checkpoint68i/pkg/gchem/gchem_calc_tendency.F
MITgcm-checkpoint68i/pkg/gchem/gchem_check.F
MITgcm-checkpoint68i/pkg/gchem/gchem_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gchem/gchem_fields_load.F
MITgcm-checkpoint68i/pkg/gchem/gchem_forcing_sep.F
MITgcm-checkpoint68i/pkg/gchem/gchem_init_fixed.F
MITgcm-checkpoint68i/pkg/gchem/gchem_init_vari.F
MITgcm-checkpoint68i/pkg/gchem/gchem_output.F
MITgcm-checkpoint68i/pkg/gchem/gchem_readparms.F
MITgcm-checkpoint68i/pkg/gchem/gchem_surfmean.F
MITgcm-checkpoint68i/pkg/gchem/gchem_tr_register.F
MITgcm-checkpoint68i/pkg/gchem/gchem_write_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_FLUX_LIMITER.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_OPTIONS.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_SOM_VARS.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_diff.list
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advection.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advscheme.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_calc_rhs.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_check.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_del2.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_init.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_state.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_exch_som.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_implicit_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_fixed.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_varia.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_plm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_read_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_advect.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_exchanges.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_fill_cs_corner.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_lim_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_prep_cs_corner.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3c4_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_write_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/generic_advdiff.tex
MITgcm-checkpoint68i/pkg/generic_advdiff/salt_fill.F
MITgcm-checkpoint68i/pkg/ggl90/
MITgcm-checkpoint68i/pkg/ggl90/GGL90.h
MITgcm-checkpoint68i/pkg/ggl90/GGL90_OPTIONS.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_diff.list
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_diff.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_visc.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_check.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_exchanges.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_idemix.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_fixed.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_varia.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_output.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_read_pickup.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_readparms.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_write_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/
MITgcm-checkpoint68i/pkg/gmredi/GMREDI.h
MITgcm-checkpoint68i/pkg/gmredi/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/pkg/gmredi/GMREDI_TAVE.h
MITgcm-checkpoint68i/pkg/gmredi/README_ADJOINT
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad.flow
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad_diff.list
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_bates_k.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_diff.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_eigs.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_b.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_bvp.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_qgleith.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_tensor.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_urms.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_check.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_description.tex
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_impl.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_do_exch.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_fixed.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_varia.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_mnc_init.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_output.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_read_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_readparms.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_residual_flow.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_rtransport.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_limit.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_psi.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_write_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_xtransport.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ytransport.F
MITgcm-checkpoint68i/pkg/gmredi/submeso_calc_psi.F
MITgcm-checkpoint68i/pkg/grdchk/
MITgcm-checkpoint68i/pkg/grdchk/GRDCHK_OPTIONS.h
MITgcm-checkpoint68i/pkg/grdchk/grdchk.h
MITgcm-checkpoint68i/pkg/grdchk/grdchk_check.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_description.tex
MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_obcs_mask.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_position.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_getadxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_getxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_init.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_loc.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_main.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_print.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_readparms.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_setxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_summary.F
MITgcm-checkpoint68i/pkg/gridalt/
MITgcm-checkpoint68i/pkg/gridalt/GRIDALT_OPTIONS.h
MITgcm-checkpoint68i/pkg/gridalt/dyn2phys.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_initialise.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_mapping.h
MITgcm-checkpoint68i/pkg/gridalt/gridalt_update.F
MITgcm-checkpoint68i/pkg/gridalt/make_phys_grid.F
MITgcm-checkpoint68i/pkg/gridalt/phys2dyn.F
MITgcm-checkpoint68i/pkg/icefront/
MITgcm-checkpoint68i/pkg/icefront/ICEFRONT.h
MITgcm-checkpoint68i/pkg/icefront/ICEFRONT_OPTIONS.h
MITgcm-checkpoint68i/pkg/icefront/ICFSymbol.txt
MITgcm-checkpoint68i/pkg/icefront/icefront_check.F
MITgcm-checkpoint68i/pkg/icefront/icefront_description.tex
MITgcm-checkpoint68i/pkg/icefront/icefront_diagnostics_init.F
MITgcm-checkpoint68i/pkg/icefront/icefront_init_fixed.F
MITgcm-checkpoint68i/pkg/icefront/icefront_init_varia.F
MITgcm-checkpoint68i/pkg/icefront/icefront_readparms.F
MITgcm-checkpoint68i/pkg/icefront/icefront_tendency_apply.F
MITgcm-checkpoint68i/pkg/icefront/icefront_thermodynamics.F
MITgcm-checkpoint68i/pkg/kl10/
MITgcm-checkpoint68i/pkg/kl10/KL10.h
MITgcm-checkpoint68i/pkg/kl10/KL10_DIAGS.h
MITgcm-checkpoint68i/pkg/kl10/KL10_OPTIONS.h
MITgcm-checkpoint68i/pkg/kl10/KL10_TAVE.h
MITgcm-checkpoint68i/pkg/kl10/kl10_calc.F
MITgcm-checkpoint68i/pkg/kl10/kl10_calc_diff.F
MITgcm-checkpoint68i/pkg/kl10/kl10_calc_visc.F
MITgcm-checkpoint68i/pkg/kl10/kl10_check.F
MITgcm-checkpoint68i/pkg/kl10/kl10_diagnostics_init.F
MITgcm-checkpoint68i/pkg/kl10/kl10_init_fixed.F
MITgcm-checkpoint68i/pkg/kl10/kl10_init_varia.F
MITgcm-checkpoint68i/pkg/kl10/kl10_output.F
MITgcm-checkpoint68i/pkg/kl10/kl10_readparms.F
MITgcm-checkpoint68i/pkg/kpp/
MITgcm-checkpoint68i/pkg/kpp/KPP.h
MITgcm-checkpoint68i/pkg/kpp/KPP_OPTIONS.h
MITgcm-checkpoint68i/pkg/kpp/KPP_PARAMS.h
MITgcm-checkpoint68i/pkg/kpp/KPP_TAVE.h
MITgcm-checkpoint68i/pkg/kpp/kpp_ad_diff.list
MITgcm-checkpoint68i/pkg/kpp/kpp_calc.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_ptr.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_s.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_t.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_visc.F
MITgcm-checkpoint68i/pkg/kpp/kpp_check.F
MITgcm-checkpoint68i/pkg/kpp/kpp_description.tex
MITgcm-checkpoint68i/pkg/kpp/kpp_diagnostics_init.F
MITgcm-checkpoint68i/pkg/kpp/kpp_do_exch.F
MITgcm-checkpoint68i/pkg/kpp/kpp_forcing_surf.F
MITgcm-checkpoint68i/pkg/kpp/kpp_init_fixed.F
MITgcm-checkpoint68i/pkg/kpp/kpp_init_varia.F
MITgcm-checkpoint68i/pkg/kpp/kpp_output.F
MITgcm-checkpoint68i/pkg/kpp/kpp_readparms.F
MITgcm-checkpoint68i/pkg/kpp/kpp_routines.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_ptr.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_s.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_t.F
MITgcm-checkpoint68i/pkg/land/
MITgcm-checkpoint68i/pkg/land/LAND_OPTIONS.h
MITgcm-checkpoint68i/pkg/land/LAND_PARAMS.h
MITgcm-checkpoint68i/pkg/land/LAND_SIZE.h
MITgcm-checkpoint68i/pkg/land/LAND_TAVE.h
MITgcm-checkpoint68i/pkg/land/LAND_VARS.h
MITgcm-checkpoint68i/pkg/land/land_albedo.F
MITgcm-checkpoint68i/pkg/land/land_check.F
MITgcm-checkpoint68i/pkg/land/land_diagnostics_init.F
MITgcm-checkpoint68i/pkg/land/land_diagnostics_state.F
MITgcm-checkpoint68i/pkg/land/land_do_diags.F
MITgcm-checkpoint68i/pkg/land/land_impl_temp.F
MITgcm-checkpoint68i/pkg/land/land_ini_vars.F
MITgcm-checkpoint68i/pkg/land/land_init_fixed.F
MITgcm-checkpoint68i/pkg/land/land_mnc_init.F
MITgcm-checkpoint68i/pkg/land/land_monitor.F
MITgcm-checkpoint68i/pkg/land/land_output.F
MITgcm-checkpoint68i/pkg/land/land_read_pickup.F
MITgcm-checkpoint68i/pkg/land/land_readparms.F
MITgcm-checkpoint68i/pkg/land/land_stepfwd.F
MITgcm-checkpoint68i/pkg/land/land_write_pickup.F
MITgcm-checkpoint68i/pkg/layers/
MITgcm-checkpoint68i/pkg/layers/LAYERS.h
MITgcm-checkpoint68i/pkg/layers/LAYERS_OPTIONS.h
MITgcm-checkpoint68i/pkg/layers/LAYERS_SIZE.h
MITgcm-checkpoint68i/pkg/layers/layers_ad_diff.list
MITgcm-checkpoint68i/pkg/layers/layers_calc.F
MITgcm-checkpoint68i/pkg/layers/layers_check.F
MITgcm-checkpoint68i/pkg/layers/layers_diagnostics_init.F
MITgcm-checkpoint68i/pkg/layers/layers_fluxcalc.F
MITgcm-checkpoint68i/pkg/layers/layers_init_fixed.F
MITgcm-checkpoint68i/pkg/layers/layers_init_varia.F
MITgcm-checkpoint68i/pkg/layers/layers_mnc_init.F
MITgcm-checkpoint68i/pkg/layers/layers_output.F
MITgcm-checkpoint68i/pkg/layers/layers_readparms.F
MITgcm-checkpoint68i/pkg/layers/layers_save.F
MITgcm-checkpoint68i/pkg/layers/layers_thermodynamics.F
MITgcm-checkpoint68i/pkg/layers/layers_wsurf_tr.F
MITgcm-checkpoint68i/pkg/longstep/
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP.h
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_OPTIONS.h
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_PARAMS.h
MITgcm-checkpoint68i/pkg/longstep/README
MITgcm-checkpoint68i/pkg/longstep/longstep_average.F
MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d_fac.F
MITgcm-checkpoint68i/pkg/longstep/longstep_check_iters.F
MITgcm-checkpoint68i/pkg/longstep/longstep_correction_step.F
MITgcm-checkpoint68i/pkg/longstep/longstep_diagnostics_init.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_fac.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_rs.F
MITgcm-checkpoint68i/pkg/longstep/longstep_forcing_surf.F
MITgcm-checkpoint68i/pkg/longstep/longstep_init_fixed.F
MITgcm-checkpoint68i/pkg/longstep/longstep_init_varia.F
MITgcm-checkpoint68i/pkg/longstep/longstep_readparms.F
MITgcm-checkpoint68i/pkg/longstep/longstep_reset_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_thermodynamics.F
MITgcm-checkpoint68i/pkg/matrix/
MITgcm-checkpoint68i/pkg/matrix/MATRIX.h
MITgcm-checkpoint68i/pkg/matrix/MATRIX_OPTIONS.h
MITgcm-checkpoint68i/pkg/matrix/matrix_init_varia.F
MITgcm-checkpoint68i/pkg/matrix/matrix_output.F
MITgcm-checkpoint68i/pkg/matrix/matrix_readparms.F
MITgcm-checkpoint68i/pkg/matrix/matrix_store_tendency.F
MITgcm-checkpoint68i/pkg/matrix/matrix_write_grid.F
MITgcm-checkpoint68i/pkg/matrix/matrix_write_tendency.F
MITgcm-checkpoint68i/pkg/mdsio/
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_3D.h
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_WH.h
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_OPTIONS.h
MITgcm-checkpoint68i/pkg/mdsio/mdsio_ad.flow
MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertorl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_check4file.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_facef_read.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl_slice.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rs.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_meta.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_section.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_tape.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_whalos.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_readvec_loc.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_slice.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_segxtorx_2d.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_metafiles.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rs.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_meta.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_section.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_tape.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_whalos.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_writelocal.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_writevec_loc.F
MITgcm-checkpoint68i/pkg/mnc/
MITgcm-checkpoint68i/pkg/mnc/CPP_OPTIONS.t
MITgcm-checkpoint68i/pkg/mnc/MNC_BUFF.h
MITgcm-checkpoint68i/pkg/mnc/MNC_COMMON.h
MITgcm-checkpoint68i/pkg/mnc/MNC_OPTIONS.h
MITgcm-checkpoint68i/pkg/mnc/MNC_PARAMS.h
MITgcm-checkpoint68i/pkg/mnc/MNC_SIZE.h
MITgcm-checkpoint68i/pkg/mnc/Makefile
MITgcm-checkpoint68i/pkg/mnc/PACKAGES_CONFIG.t
MITgcm-checkpoint68i/pkg/mnc/README.txt
MITgcm-checkpoint68i/pkg/mnc/SIZE.t
MITgcm-checkpoint68i/pkg/mnc/TESTING_README.txt
MITgcm-checkpoint68i/pkg/mnc/build_netcdf_stubs
MITgcm-checkpoint68i/pkg/mnc/mnc_ad.flow
MITgcm-checkpoint68i/pkg/mnc/mnc_create_dir.c
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_citer.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_cvars.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_fsize.c
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_init.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_missingvals.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_model_attr.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_readwrite.template
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_udim.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_write_grid_info.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cwrapper.F
MITgcm-checkpoint68i/pkg/mnc/mnc_description.tex
MITgcm-checkpoint68i/pkg/mnc/mnc_dim.F
MITgcm-checkpoint68i/pkg/mnc/mnc_dump.F
MITgcm-checkpoint68i/pkg/mnc/mnc_file.F
MITgcm-checkpoint68i/pkg/mnc/mnc_grid.F
MITgcm-checkpoint68i/pkg/mnc/mnc_init.F
MITgcm-checkpoint68i/pkg/mnc/mnc_readparms.F
MITgcm-checkpoint68i/pkg/mnc/mnc_test_001.T
MITgcm-checkpoint68i/pkg/mnc/mnc_test_002.T
MITgcm-checkpoint68i/pkg/mnc/mnc_test_utils.T
MITgcm-checkpoint68i/pkg/mnc/mnc_update_time.F
MITgcm-checkpoint68i/pkg/mnc/mnc_utils.F
MITgcm-checkpoint68i/pkg/mnc/mnc_var.F
MITgcm-checkpoint68i/pkg/mnc/parse_local_info
MITgcm-checkpoint68i/pkg/mnc/pre-defined_grids.txt
MITgcm-checkpoint68i/pkg/mom_common/
MITgcm-checkpoint68i/pkg/mom_common/MOM_COMMON_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_common/MOM_VISC.h
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_3d_strain.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_absvort3.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hdiv.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hfacz.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_ke.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_relvort3.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_strain.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_tension.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_visc.F
MITgcm-checkpoint68i/pkg/mom_common/mom_common_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_common/mom_diagnostics_init.F
MITgcm-checkpoint68i/pkg/mom_common/mom_hdissip.F
MITgcm-checkpoint68i/pkg/mom_common/mom_init_fixed.F
MITgcm-checkpoint68i/pkg/mom_common/mom_quasihydrostatic.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_botdrag_coeff.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_implicit_r.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_rviscflux.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_uv_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_botdrag_coeff.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_implicit_r.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_rviscflux.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_limit.F
MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_stretch.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_fluxform/
MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM.h
MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_calc_rtrans.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_uu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_vu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_wu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_coriolis.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_del2u.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_cylinder.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_sphere.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_xviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_yviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_uv_boundary.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_uv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_vv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_wv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_coriolis.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_del2v.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_cylinder.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_sphere.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_xviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_yviscflux.F
MITgcm-checkpoint68i/pkg/mom_vecinv/
MITgcm-checkpoint68i/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_del2uv.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_hdissip.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_grad_ke.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_vertshear.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_grad_ke.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_vertshear.F
MITgcm-checkpoint68i/pkg/monitor/
MITgcm-checkpoint68i/pkg/monitor/MONITOR.h
MITgcm-checkpoint68i/pkg/monitor/MONITOR_OPTIONS.h
MITgcm-checkpoint68i/pkg/monitor/mon_advcfl.F
MITgcm-checkpoint68i/pkg/monitor/mon_advcflw.F
MITgcm-checkpoint68i/pkg/monitor/mon_advcflw2.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_advcfl.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_description.tex
MITgcm-checkpoint68i/pkg/monitor/mon_init.F
MITgcm-checkpoint68i/pkg/monitor/mon_ke.F
MITgcm-checkpoint68i/pkg/monitor/mon_out.F
MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_set_iounit.F
MITgcm-checkpoint68i/pkg/monitor/mon_set_pref.F
MITgcm-checkpoint68i/pkg/monitor/mon_solution.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_latbnd_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_surfcor.F
MITgcm-checkpoint68i/pkg/monitor/mon_vort3.F
MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rs.F
MITgcm-checkpoint68i/pkg/monitor/monitor.F
MITgcm-checkpoint68i/pkg/monitor/monitor_ad.F
MITgcm-checkpoint68i/pkg/monitor/monitor_ad.flow
MITgcm-checkpoint68i/pkg/monitor/monitor_description.tex
MITgcm-checkpoint68i/pkg/monitor/monitor_g.F
MITgcm-checkpoint68i/pkg/my82/
MITgcm-checkpoint68i/pkg/my82/MY82.h
MITgcm-checkpoint68i/pkg/my82/MY82_OPTIONS.h
MITgcm-checkpoint68i/pkg/my82/my82_calc.F
MITgcm-checkpoint68i/pkg/my82/my82_calc_diff.F
MITgcm-checkpoint68i/pkg/my82/my82_calc_visc.F
MITgcm-checkpoint68i/pkg/my82/my82_check.F
MITgcm-checkpoint68i/pkg/my82/my82_diagnostics_init.F
MITgcm-checkpoint68i/pkg/my82/my82_init_fixed.F
MITgcm-checkpoint68i/pkg/my82/my82_init_varia.F
MITgcm-checkpoint68i/pkg/my82/my82_output.F
MITgcm-checkpoint68i/pkg/my82/my82_readparms.F
MITgcm-checkpoint68i/pkg/my82/my82_ri_number.F
MITgcm-checkpoint68i/pkg/mypackage/
MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE.h
MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE_OPTIONS.h
MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad.flow
MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad_diff.list
MITgcm-checkpoint68i/pkg/mypackage/mypackage_calc_rhs.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_check.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_description.tex
MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_init.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_state.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_fixed.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_varia.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_mnc_init.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_read_pickup.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_readparms.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_tendency_apply.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_write_pickup.F
MITgcm-checkpoint68i/pkg/obcs/
MITgcm-checkpoint68i/pkg/obcs/OBCS_FIELDS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_GRID.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_OPTIONS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_PARAMS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_PTRACERS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_SEAICE.h
MITgcm-checkpoint68i/pkg/obcs/ORLANSKI.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad.flow
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_diff.list
MITgcm-checkpoint68i/pkg/obcs/obcs_add_tides.F
MITgcm-checkpoint68i/pkg/obcs/obcs_adjust.F
MITgcm-checkpoint68i/pkg/obcs/obcs_adjust_uvice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_eta.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ptracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_r_star.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_seaice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_surf_dr.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ts.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uv.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uvice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_w.F
MITgcm-checkpoint68i/pkg/obcs/obcs_balance_flow.F
MITgcm-checkpoint68i/pkg/obcs/obcs_calc.F
MITgcm-checkpoint68i/pkg/obcs/obcs_calc_stevens.F
MITgcm-checkpoint68i/pkg/obcs/obcs_check.F
MITgcm-checkpoint68i/pkg/obcs/obcs_check_depths.F
MITgcm-checkpoint68i/pkg/obcs/obcs_copy_tracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_copy_uv_n.F
MITgcm-checkpoint68i/pkg/obcs/obcs_description.tex
MITgcm-checkpoint68i/pkg/obcs/obcs_diag_balance.F
MITgcm-checkpoint68i/pkg/obcs/obcs_exchanges.F
MITgcm-checkpoint68i/pkg/obcs/obcs_exf_load.F
MITgcm-checkpoint68i/pkg/obcs/obcs_fields_load.F
MITgcm-checkpoint68i/pkg/obcs/obcs_init_fixed.F
MITgcm-checkpoint68i/pkg/obcs/obcs_init_variables.F
MITgcm-checkpoint68i/pkg/obcs/obcs_mon_stats.F
MITgcm-checkpoint68i/pkg/obcs/obcs_monitor.F
MITgcm-checkpoint68i/pkg/obcs/obcs_output.F
MITgcm-checkpoint68i/pkg/obcs/obcs_prescribe_read.F
MITgcm-checkpoint68i/pkg/obcs/obcs_read_pickup.F
MITgcm-checkpoint68i/pkg/obcs/obcs_readparms.F
MITgcm-checkpoint68i/pkg/obcs/obcs_save_uv_n.F
MITgcm-checkpoint68i/pkg/obcs/obcs_seaice_sponge.F
MITgcm-checkpoint68i/pkg/obcs/obcs_set_connect.F
MITgcm-checkpoint68i/pkg/obcs/obcs_sponge.F
MITgcm-checkpoint68i/pkg/obcs/obcs_u1_adv_tracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_write_pickup.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_east.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_init.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_north.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_south.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_west.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/
MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_PARAMS.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_TAVE.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCNCPL.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCN_CPL_OPTIONS.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_exch_configs.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_export_import_data.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_import_cplparms.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_ini_vars.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init_fixed.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_output.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_readparms.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_register.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_write_pickup.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_apply_import.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_check_cplconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_diags.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_read_pickup.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_data.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_fields.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_ocnconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_atmconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_fields.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_store_my_data.F
MITgcm-checkpoint68i/pkg/offline/
MITgcm-checkpoint68i/pkg/offline/OFFLINE.h
MITgcm-checkpoint68i/pkg/offline/OFFLINE_OPTIONS.h
MITgcm-checkpoint68i/pkg/offline/OFFLINE_SWITCH.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_diff.list
MITgcm-checkpoint68i/pkg/offline/offline_check.F
MITgcm-checkpoint68i/pkg/offline/offline_fields_load.F
MITgcm-checkpoint68i/pkg/offline/offline_get_diffus.F
MITgcm-checkpoint68i/pkg/offline/offline_init_varia.F
MITgcm-checkpoint68i/pkg/offline/offline_readparms.F
MITgcm-checkpoint68i/pkg/offline/offline_reset_parms.F
MITgcm-checkpoint68i/pkg/openad/
MITgcm-checkpoint68i/pkg/openad/OPENAD_OPTIONS.h
MITgcm-checkpoint68i/pkg/openad/ad_s_different_multiple.F
MITgcm-checkpoint68i/pkg/openad/ad_s_ifnblnk.F
MITgcm-checkpoint68i/pkg/openad/ad_s_ilnblnk.F
MITgcm-checkpoint68i/pkg/openad/ad_s_mds_reclen.F
MITgcm-checkpoint68i/pkg/openad/externalDummies.F
MITgcm-checkpoint68i/pkg/openad/findAndDiff.bash
MITgcm-checkpoint68i/pkg/openad/inner_do_loop.F
MITgcm-checkpoint68i/pkg/openad/openad_ad_diff.list
MITgcm-checkpoint68i/pkg/openad/openad_checkpointInit.F
MITgcm-checkpoint68i/pkg/openad/openad_dumpAdjoint.F
MITgcm-checkpoint68i/pkg/openad/seawater.F
MITgcm-checkpoint68i/pkg/openad/the_model_main.F
MITgcm-checkpoint68i/pkg/opps/
MITgcm-checkpoint68i/pkg/opps/OPPS.h
MITgcm-checkpoint68i/pkg/opps/OPPS_OPTIONS.h
MITgcm-checkpoint68i/pkg/opps/opps_calc.F
MITgcm-checkpoint68i/pkg/opps/opps_check.F
MITgcm-checkpoint68i/pkg/opps/opps_init.F
MITgcm-checkpoint68i/pkg/opps/opps_interface.F
MITgcm-checkpoint68i/pkg/opps/opps_readparms.F
MITgcm-checkpoint68i/pkg/pkg_depend
MITgcm-checkpoint68i/pkg/pkg_groups
MITgcm-checkpoint68i/pkg/pp81/
MITgcm-checkpoint68i/pkg/pp81/PP81.h
MITgcm-checkpoint68i/pkg/pp81/PP81_OPTIONS.h
MITgcm-checkpoint68i/pkg/pp81/pp81_calc.F
MITgcm-checkpoint68i/pkg/pp81/pp81_calc_diff.F
MITgcm-checkpoint68i/pkg/pp81/pp81_calc_visc.F
MITgcm-checkpoint68i/pkg/pp81/pp81_check.F
MITgcm-checkpoint68i/pkg/pp81/pp81_diagnostics_init.F
MITgcm-checkpoint68i/pkg/pp81/pp81_init_fixed.F
MITgcm-checkpoint68i/pkg/pp81/pp81_init_varia.F
MITgcm-checkpoint68i/pkg/pp81/pp81_output.F
MITgcm-checkpoint68i/pkg/pp81/pp81_readparms.F
MITgcm-checkpoint68i/pkg/pp81/pp81_ri_number.F
MITgcm-checkpoint68i/pkg/profiles/
MITgcm-checkpoint68i/pkg/profiles/PROFILES_OPTIONS.h
MITgcm-checkpoint68i/pkg/profiles/PROFILES_SIZE.h
MITgcm-checkpoint68i/pkg/profiles/active_file_control_profiles.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.flow
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_ad.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_g.F
MITgcm-checkpoint68i/pkg/profiles/cost_profiles.F
MITgcm-checkpoint68i/pkg/profiles/profiles.flow
MITgcm-checkpoint68i/pkg/profiles/profiles.h
MITgcm-checkpoint68i/pkg/profiles/profiles_ad_diff.list
MITgcm-checkpoint68i/pkg/profiles/profiles_findunit.F
MITgcm-checkpoint68i/pkg/profiles/profiles_ini_io.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_fixed.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_ncfile.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_varia.F
MITgcm-checkpoint68i/pkg/profiles/profiles_inloop.F
MITgcm-checkpoint68i/pkg/profiles/profiles_interp.F
MITgcm-checkpoint68i/pkg/profiles/profiles_readparms.F
MITgcm-checkpoint68i/pkg/profiles/profiles_readvector.F
MITgcm-checkpoint68i/pkg/ptracers/
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_FIELDS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_MOD.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_OPTIONS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_PARAMS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_SIZE.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_START.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_TAVE.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad.flow
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_diff.list
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_dump.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_adcommon.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_apply_forcing.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_calc_wsurf_tr.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_check.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_check_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_convect.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_debug.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_state.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_data_mod.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_mod.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_fields_blocking_exch.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_forcing_surf.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_fixed.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_varia.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_integrate.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_mnc_init.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor_ad.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_output.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_read_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_readparms.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_reset.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_set_iolabel.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_switch_onoff.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_timeave.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_turnoff_io.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_state.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_timeave.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_zonal_filt_apply.F
MITgcm-checkpoint68i/pkg/rbcs/
MITgcm-checkpoint68i/pkg/rbcs/RBCS_FIELDS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_OPTIONS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_PARAMS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_SIZE.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_diff.list
MITgcm-checkpoint68i/pkg/rbcs/rbcs_add_tendency.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_fields_load.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_fixed.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_varia.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_readparms.F
MITgcm-checkpoint68i/pkg/regrid/
MITgcm-checkpoint68i/pkg/regrid/Makefile
MITgcm-checkpoint68i/pkg/regrid/REGRID.h
MITgcm-checkpoint68i/pkg/regrid/REGRID_OPTIONS.h
MITgcm-checkpoint68i/pkg/regrid/REGRID_SIZE.h
MITgcm-checkpoint68i/pkg/regrid/regrid_check.F
MITgcm-checkpoint68i/pkg/regrid/regrid_description.tex
MITgcm-checkpoint68i/pkg/regrid/regrid_init_fixed.F
MITgcm-checkpoint68i/pkg/regrid/regrid_init_varia.F
MITgcm-checkpoint68i/pkg/regrid/regrid_mnc_init.F
MITgcm-checkpoint68i/pkg/regrid/regrid_readparms.F
MITgcm-checkpoint68i/pkg/regrid/regrid_scalar_out.template
MITgcm-checkpoint68i/pkg/runclock/
MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK.h
MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK_OPTIONS.h
MITgcm-checkpoint68i/pkg/runclock/runclock_check.F
MITgcm-checkpoint68i/pkg/runclock/runclock_continue.F
MITgcm-checkpoint68i/pkg/runclock/runclock_gettime.F
MITgcm-checkpoint68i/pkg/runclock/runclock_init.F
MITgcm-checkpoint68i/pkg/runclock/runclock_readparms.F
MITgcm-checkpoint68i/pkg/rw/
MITgcm-checkpoint68i/pkg/rw/RW_MFLDS.h
MITgcm-checkpoint68i/pkg/rw/RW_OPTIONS.h
MITgcm-checkpoint68i/pkg/rw/get_write_global_fld.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rl.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rs.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rl.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rs.F
MITgcm-checkpoint68i/pkg/rw/read_glvec_rl.F
MITgcm-checkpoint68i/pkg/rw/read_glvec_rs.F
MITgcm-checkpoint68i/pkg/rw/read_mflds.F
MITgcm-checkpoint68i/pkg/rw/read_rec.F
MITgcm-checkpoint68i/pkg/rw/rw_ad.flow
MITgcm-checkpoint68i/pkg/rw/rw_ad_diff.list
MITgcm-checkpoint68i/pkg/rw/rw_get_suffix.F
MITgcm-checkpoint68i/pkg/rw/set_write_global_fld.F
MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rs.F
MITgcm-checkpoint68i/pkg/rw/write_glvec_rl.F
MITgcm-checkpoint68i/pkg/rw/write_glvec_rs.F
MITgcm-checkpoint68i/pkg/rw/write_local_rl.F
MITgcm-checkpoint68i/pkg/rw/write_local_rs.F
MITgcm-checkpoint68i/pkg/rw/write_rec.F
MITgcm-checkpoint68i/pkg/salt_plume/
MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME.h
MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME_OPTIONS.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_diff.list
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_apply.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_calc_depth.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_check.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_description.tex
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_init.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_do_exch.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_forcing_surf.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_frac.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_fixed.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_varia.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_mnc_init.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_readparms.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_s.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_t.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_volfrac.F
MITgcm-checkpoint68i/pkg/sbo/
MITgcm-checkpoint68i/pkg/sbo/SBO.h
MITgcm-checkpoint68i/pkg/sbo/SBO_OPTIONS.h
MITgcm-checkpoint68i/pkg/sbo/sbo_calc.F
MITgcm-checkpoint68i/pkg/sbo/sbo_check.F
MITgcm-checkpoint68i/pkg/sbo/sbo_description.tex
MITgcm-checkpoint68i/pkg/sbo/sbo_output.F
MITgcm-checkpoint68i/pkg/sbo/sbo_readparms.F
MITgcm-checkpoint68i/pkg/sbo/sbo_rho.F
MITgcm-checkpoint68i/pkg/seaice/
MITgcm-checkpoint68i/pkg/seaice/SEAICE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_COST.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_PARAMS.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_SIZE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_TAVE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_TRACER.h
MITgcm-checkpoint68i/pkg/seaice/advect.F
MITgcm-checkpoint68i/pkg/seaice/cost_ice_test.F
MITgcm-checkpoint68i/pkg/seaice/diffus.F
MITgcm-checkpoint68i/pkg/seaice/dynsolver.F
MITgcm-checkpoint68i/pkg/seaice/lsr.F
MITgcm-checkpoint68i/pkg/seaice/ostres.F
MITgcm-checkpoint68i/pkg/seaice/seaice.flow
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_diff.list
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_dump.F
MITgcm-checkpoint68i/pkg/seaice/seaice_advdiff.F
MITgcm-checkpoint68i/pkg/seaice/seaice_advection.F
MITgcm-checkpoint68i/pkg/seaice/seaice_bottomdrag_coeffs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_budget_ocean.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_ice_strength.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_lhs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_residual.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_rhs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_strainrates.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_stressdiv.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_viscosities.F
MITgcm-checkpoint68i/pkg/seaice/seaice_check.F
MITgcm-checkpoint68i/pkg/seaice/seaice_check_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_accumulate_mean.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_areasst.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_concentration.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_driver.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_export.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_final.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_fixed.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_varia.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sensi.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sss.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sst.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_weights.F
MITgcm-checkpoint68i/pkg/seaice/seaice_ctrl_map_ini.F
MITgcm-checkpoint68i/pkg/seaice/seaice_description.tex
MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_init.F
MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/seaice/seaice_diffusion.F
MITgcm-checkpoint68i/pkg/seaice/seaice_do_ridging.F
MITgcm-checkpoint68i/pkg/seaice/seaice_dynsolver.F
MITgcm-checkpoint68i/pkg/seaice/seaice_evp.F
MITgcm-checkpoint68i/pkg/seaice/seaice_fake.F
MITgcm-checkpoint68i/pkg/seaice/seaice_fgmres.F
MITgcm-checkpoint68i/pkg/seaice/seaice_freedrift.F
MITgcm-checkpoint68i/pkg/seaice/seaice_get_dynforcing.F
MITgcm-checkpoint68i/pkg/seaice/seaice_growth.F
MITgcm-checkpoint68i/pkg/seaice/seaice_growth_adx.F
MITgcm-checkpoint68i/pkg/seaice/seaice_init_fixed.F
MITgcm-checkpoint68i/pkg/seaice/seaice_init_varia.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_redist.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_remap.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_sum.F
MITgcm-checkpoint68i/pkg/seaice/seaice_jacvec.F
MITgcm-checkpoint68i/pkg/seaice/seaice_jfnk.F
MITgcm-checkpoint68i/pkg/seaice/seaice_krylov.F
MITgcm-checkpoint68i/pkg/seaice/seaice_lsr.F
MITgcm-checkpoint68i/pkg/seaice/seaice_map_thsice.F
MITgcm-checkpoint68i/pkg/seaice/seaice_mnc_init.F
MITgcm-checkpoint68i/pkg/seaice/seaice_model.F
MITgcm-checkpoint68i/pkg/seaice/seaice_mom_advection.F
MITgcm-checkpoint68i/pkg/seaice/seaice_monitor.F
MITgcm-checkpoint68i/pkg/seaice/seaice_monitor_ad.F
MITgcm-checkpoint68i/pkg/seaice/seaice_obcs_output.F
MITgcm-checkpoint68i/pkg/seaice/seaice_ocean_stress.F
MITgcm-checkpoint68i/pkg/seaice/seaice_oceandrag_coeffs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_output.F
MITgcm-checkpoint68i/pkg/seaice/seaice_preconditioner.F
MITgcm-checkpoint68i/pkg/seaice/seaice_prepare_ridging.F
MITgcm-checkpoint68i/pkg/seaice/seaice_read_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_readparms.F
MITgcm-checkpoint68i/pkg/seaice/seaice_reg_ridge.F
MITgcm-checkpoint68i/pkg/seaice/seaice_solve4temp.F
MITgcm-checkpoint68i/pkg/seaice/seaice_summary.F
MITgcm-checkpoint68i/pkg/seaice/seaice_tracer_phys.F
MITgcm-checkpoint68i/pkg/seaice/seaice_turnoff_io.F
MITgcm-checkpoint68i/pkg/seaice/seaice_write_pickup.F
MITgcm-checkpoint68i/pkg/shap_filt/
MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT.h
MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT_OPTIONS.h
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_ad_diff.list
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_ts.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_uv.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_computvort.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_diagnostics_init.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_init_fixed.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_readparms.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_relvort3.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s1.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s2.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s4.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracerold.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_u.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s1.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2c.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s4.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_v.F
MITgcm-checkpoint68i/pkg/shelfice/
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_COST.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_TAVE.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_diff.list
MITgcm-checkpoint68i/pkg/shelfice/shelfice_check.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_accumulate.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_final.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_shifwflx.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_diagnostics_drag.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing_surf.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_depths.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_fixed.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_varia.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_mask_seaice.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_mnc_init.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_output.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_read_pickup.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_readparms.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_c_mask.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_calc_w.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_state.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_uv_mask.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remeshing.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_step_icemass.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_thermodynamics.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_u_drag_coeff.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_v_drag_coeff.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_write_pickup.F
MITgcm-checkpoint68i/pkg/showflops/
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS.h
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_INIT.h
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_OPTIONS.h
MITgcm-checkpoint68i/pkg/showflops/showflops_ad.flow
MITgcm-checkpoint68i/pkg/showflops/showflops_init.F
MITgcm-checkpoint68i/pkg/showflops/showflops_inloop.F
MITgcm-checkpoint68i/pkg/showflops/showflops_insolve.F
MITgcm-checkpoint68i/pkg/smooth/
MITgcm-checkpoint68i/pkg/smooth/SMOOTH.h
MITgcm-checkpoint68i/pkg/smooth/SMOOTH_OPTIONS.h
MITgcm-checkpoint68i/pkg/smooth/smooth2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_ad_diff.list
MITgcm-checkpoint68i/pkg/smooth/smooth_basic2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_check.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl2dw.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_description.tex
MITgcm-checkpoint68i/pkg/smooth/smooth_diff2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_diff3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_hetero2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_impldiff.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init_fixed.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init_varia.F
MITgcm-checkpoint68i/pkg/smooth/smooth_readparms.F
MITgcm-checkpoint68i/pkg/smooth/smooth_rhs.F
MITgcm-checkpoint68i/pkg/sphere/
MITgcm-checkpoint68i/pkg/sphere/exch_all_2d_rl.F
MITgcm-checkpoint68i/pkg/sphere/sphere.F
MITgcm-checkpoint68i/pkg/sphere/sphere.h
MITgcm-checkpoint68i/pkg/sphere/sphere_ad.flow
MITgcm-checkpoint68i/pkg/sphere/sphere_ad_diff.list
MITgcm-checkpoint68i/pkg/streamice/
MITgcm-checkpoint68i/pkg/streamice/STREAMICE.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_ADV.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_BDRY.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CG.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CTRL_FLUX.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_PETSC.h
MITgcm-checkpoint68i/pkg/streamice/adstreamice_cg_solve.F
MITgcm-checkpoint68i/pkg/streamice/adstreamice_invert_surf_forthick.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_prime_streamice.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice_prime.F
MITgcm-checkpoint68i/pkg/streamice/phi_gl_streamice.F
MITgcm-checkpoint68i/pkg/streamice/slope_limiter.F
MITgcm-checkpoint68i/pkg/streamice/streamice.flow
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_diff.list
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_x.F
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_y.F
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_front.F
MITgcm-checkpoint68i/pkg/streamice/streamice_advect_2dtracer.F
MITgcm-checkpoint68i/pkg/streamice/streamice_advect_thickness.F
MITgcm-checkpoint68i/pkg/streamice/streamice_apply_flux_ctrl.F
MITgcm-checkpoint68i/pkg/streamice/streamice_bstress_exponent.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_functions.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_matfree.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_wrapper.F
MITgcm-checkpoint68i/pkg/streamice/streamice_check.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cost_surf_accum.F
MITgcm-checkpoint68i/pkg/streamice/streamice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_fd.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_ppm.F
MITgcm-checkpoint68i/pkg/streamice/streamice_dump.F
MITgcm-checkpoint68i/pkg/streamice/streamice_dump_ad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_fields_load.F
MITgcm-checkpoint68i/pkg/streamice/streamice_finalize_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_forced_buttress.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_fp_err_oad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_fp_err.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err_oad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_diagnostics.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_fixed.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_phi.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_varia.F
MITgcm-checkpoint68i/pkg/streamice/streamice_initialise_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_invert_surf_forthick.F
MITgcm-checkpoint68i/pkg/streamice/streamice_petsc_numerate.F
MITgcm-checkpoint68i/pkg/streamice/streamice_petscmatdestroy.F
MITgcm-checkpoint68i/pkg/streamice/streamice_read_pickup.F
MITgcm-checkpoint68i/pkg/streamice/streamice_readparms.F
MITgcm-checkpoint68i/pkg/streamice/streamice_taub.F
MITgcm-checkpoint68i/pkg/streamice/streamice_timestep.F
MITgcm-checkpoint68i/pkg/streamice/streamice_tridiag_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_upd_ffrac_uncoupled.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phi.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phistage.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve_openad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_velmask_upd.F
MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta.F
MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta_hybrid.F
MITgcm-checkpoint68i/pkg/streamice/streamice_write_pickup.F
MITgcm-checkpoint68i/pkg/thsice/
MITgcm-checkpoint68i/pkg/thsice/THSICE_COST.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_DEBUG.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_PARAMS.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_SIZE.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_TAVE.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_VARS.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad.flow
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_diff.list
MITgcm-checkpoint68i/pkg/thsice/thsice_advdiff.F
MITgcm-checkpoint68i/pkg/thsice/thsice_advection.F
MITgcm-checkpoint68i/pkg/thsice/thsice_albedo.F
MITgcm-checkpoint68i/pkg/thsice/thsice_ave.F
MITgcm-checkpoint68i/pkg/thsice/thsice_balance_frw.F
MITgcm-checkpoint68i/pkg/thsice/thsice_calc_thickn.F
MITgcm-checkpoint68i/pkg/thsice/thsice_check.F
MITgcm-checkpoint68i/pkg/thsice/thsice_check_conserv.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_driver.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_final.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_init_varia.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_test.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_init.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diffusion.F
MITgcm-checkpoint68i/pkg/thsice/thsice_do_advect.F
MITgcm-checkpoint68i/pkg/thsice/thsice_do_exch.F
MITgcm-checkpoint68i/pkg/thsice/thsice_extend.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_bulkf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_exf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_ocean.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_precip.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_velocity.F
MITgcm-checkpoint68i/pkg/thsice/thsice_impl_temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_ini_vars.F
MITgcm-checkpoint68i/pkg/thsice/thsice_init_fixed.F
MITgcm-checkpoint68i/pkg/thsice/thsice_main.F
MITgcm-checkpoint68i/pkg/thsice/thsice_map_exf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_mnc_init.F
MITgcm-checkpoint68i/pkg/thsice/thsice_monitor.F
MITgcm-checkpoint68i/pkg/thsice/thsice_output.F
MITgcm-checkpoint68i/pkg/thsice/thsice_read_pickup.F
MITgcm-checkpoint68i/pkg/thsice/thsice_readparms.F
MITgcm-checkpoint68i/pkg/thsice/thsice_reshape_layers.F
MITgcm-checkpoint68i/pkg/thsice/thsice_salt_plume.F
MITgcm-checkpoint68i/pkg/thsice/thsice_slab_ocean.F
MITgcm-checkpoint68i/pkg/thsice/thsice_solve4temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_step_fwd.F
MITgcm-checkpoint68i/pkg/thsice/thsice_step_temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_test_addfluid.h
MITgcm-checkpoint68i/pkg/thsice/thsice_turnoff_io.F
MITgcm-checkpoint68i/pkg/thsice/thsice_write_pickup.F
MITgcm-checkpoint68i/pkg/timeave/
MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_OPTIONS.h
MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_STATV.h
MITgcm-checkpoint68i/pkg/timeave/timeave_ad_diff.list
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1k1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1vfc.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2v.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2vfc.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_dif_1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumulate.F
MITgcm-checkpoint68i/pkg/timeave/timeave_description.tex
MITgcm-checkpoint68i/pkg/timeave/timeave_init_fixed.F
MITgcm-checkpoint68i/pkg/timeave/timeave_norma_2v.F
MITgcm-checkpoint68i/pkg/timeave/timeave_normalize.F
MITgcm-checkpoint68i/pkg/timeave/timeave_reset.F
MITgcm-checkpoint68i/pkg/timeave/timeave_statv_write.F
MITgcm-checkpoint68i/pkg/timeave/timeave_statvars.F
MITgcm-checkpoint68i/pkg/timeave/timeave_surf_flux.F
MITgcm-checkpoint68i/pkg/zonal_filt/
MITgcm-checkpoint68i/pkg/zonal_filt/FFTPACK.h
MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT.h
MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT_OPTIONS.h
MITgcm-checkpoint68i/pkg/zonal_filt/fftpack.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_ts.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_uv.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_init.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_nofill.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_postsmooth.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_presmooth.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_readparms.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filter.F
MITgcm-checkpoint68i/tools/
MITgcm-checkpoint68i/tools/OAD_support/
MITgcm-checkpoint68i/tools/OAD_support/OAD_active.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_cp.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_regular_cp.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_rev.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_tape.F90
MITgcm-checkpoint68i/tools/OAD_support/ad_inline.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xy.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xyz.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_write_xy.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.dummy_in_stepping.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rl.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rs.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_max_r8.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_r8.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_tile_rl.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.regular.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.revolve.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.sa_cg2d.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.split.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.split_non_anonymous.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_cg_solve.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_fp_err_oad.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_vel_resid_err_oad.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_invert_surf_forthick.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_smooth_adjoint_field.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_vel_phistage.F
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.awk
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.csh
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.awk
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.csh
MITgcm-checkpoint68i/tools/OAD_support/cb2mUseModules.bash
MITgcm-checkpoint68i/tools/OAD_support/dontCompile
MITgcm-checkpoint68i/tools/OAD_support/dontTransform
MITgcm-checkpoint68i/tools/OAD_support/fixData.sed
MITgcm-checkpoint68i/tools/OAD_support/iaddr.c
MITgcm-checkpoint68i/tools/OAD_support/insertTemplateDir.bash
MITgcm-checkpoint68i/tools/OAD_support/keepOriginal
MITgcm-checkpoint68i/tools/OAD_support/revolve.F90
MITgcm-checkpoint68i/tools/OAD_support/stop2print.sed
MITgcm-checkpoint68i/tools/OAD_support/strip.sed
MITgcm-checkpoint68i/tools/OAD_support/timeRatio.c
MITgcm-checkpoint68i/tools/OAD_support/w2f__types.F90
MITgcm-checkpoint68i/tools/ad_taf_output.f.adtrick.diff
MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_del1
MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_full
MITgcm-checkpoint68i/tools/ad_taf_output.f.onlyfwd.diff
MITgcm-checkpoint68i/tools/adjoint_options/
MITgcm-checkpoint68i/tools/adjoint_options/MITgcm-c64l-TAFv2.patch
MITgcm-checkpoint68i/tools/adjoint_options/README.patch
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_default
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_diva
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_f95
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_oad
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_state_final
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_tamc_compatibility
MITgcm-checkpoint68i/tools/adjoint_sed
MITgcm-checkpoint68i/tools/as
MITgcm-checkpoint68i/tools/build_options/
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-6_f90+mpi_caspur
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-6_sx90_dkrz
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-ACE_sxf90_awi
MITgcm-checkpoint68i/tools/build_options/cygwin_ia32_g77
MITgcm-checkpoint68i/tools/build_options/darwin_absoft_f77
MITgcm-checkpoint68i/tools/build_options/darwin_amd64_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_arm64_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_g95
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_ifort
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_pgf95_trane
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_f95
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_g77
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther+wienders
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther_baylor
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_tiger_baylor
MITgcm-checkpoint68i/tools/build_options/linux_alpha_g77
MITgcm-checkpoint68i/tools/build_options/linux_amd64_absoft
MITgcm-checkpoint68i/tools/build_options/linux_amd64_g77
MITgcm-checkpoint68i/tools/build_options/linux_amd64_g95
MITgcm-checkpoint68i/tools/build_options/linux_amd64_gfortran
MITgcm-checkpoint68i/tools/build_options/linux_amd64_gfortran_greenplanet
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+gcc
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi_engaging
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MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi_stampede2_skx
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MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+mpi_sal_oxford
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+mpi_yellowstone
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort10-
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MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_beagle
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_discover
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_fimm_default
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_fimm_emic
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_uv100
MITgcm-checkpoint68i/tools/build_options/linux_amd64_open64
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pathf90
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf77
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf77+mpi_ncar
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf77+mpi_xd1
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf77_ocl
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf90+mpi_greenplanet
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf90+mpi_xd1
MITgcm-checkpoint68i/tools/build_options/linux_amd64_sunf90
MITgcm-checkpoint68i/tools/build_options/linux_ia32_absoft
MITgcm-checkpoint68i/tools/build_options/linux_ia32_g77
MITgcm-checkpoint68i/tools/build_options/linux_ia32_g95
MITgcm-checkpoint68i/tools/build_options/linux_ia32_gfortran
MITgcm-checkpoint68i/tools/build_options/linux_ia32_gfortran+mpi_fc_lam
MITgcm-checkpoint68i/tools/build_options/linux_ia32_ifort
MITgcm-checkpoint68i/tools/build_options/linux_ia32_ifort10.1
MITgcm-checkpoint68i/tools/build_options/linux_ia32_ifort11
MITgcm-checkpoint68i/tools/build_options/linux_ia32_lf95
MITgcm-checkpoint68i/tools/build_options/linux_ia32_open64
MITgcm-checkpoint68i/tools/build_options/linux_ia32_pathf90
MITgcm-checkpoint68i/tools/build_options/linux_ia32_pgf77
MITgcm-checkpoint68i/tools/build_options/linux_ia32_pgf77+mpi_aer
MITgcm-checkpoint68i/tools/build_options/linux_ia32_sunf90
MITgcm-checkpoint68i/tools/build_options/linux_ia64_cray_archer2
MITgcm-checkpoint68i/tools/build_options/linux_ia64_cray_cca
MITgcm-checkpoint68i/tools/build_options/linux_ia64_cray_ollie
MITgcm-checkpoint68i/tools/build_options/linux_ia64_efc
MITgcm-checkpoint68i/tools/build_options/linux_ia64_g77
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort+mpi_altix_nas
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort+mpi_swell
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort9.0+mpt_altix3700_stommel
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort_altix_jpl
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort_ollie
MITgcm-checkpoint68i/tools/build_options/linux_ia64_open64
MITgcm-checkpoint68i/tools/build_options/linux_ia64_pgf77+mpi_cray_xt3_jaguar
MITgcm-checkpoint68i/tools/build_options/linux_ppc64_xlf
MITgcm-checkpoint68i/tools/build_options/linux_ppc_xlf
MITgcm-checkpoint68i/tools/build_options/sp5+mpi
MITgcm-checkpoint68i/tools/build_options/sp5+mpi_nas
MITgcm-checkpoint68i/tools/build_options/sp6+mpi_iblade
MITgcm-checkpoint68i/tools/build_options/sp6_ncar
MITgcm-checkpoint68i/tools/build_options/sunos_amd64_f77_awi
MITgcm-checkpoint68i/tools/build_options/sunos_i86pc_f95
MITgcm-checkpoint68i/tools/build_options/sunos_sparc_sunf90
MITgcm-checkpoint68i/tools/build_options/sunos_sparc_sunf90_m64
MITgcm-checkpoint68i/tools/build_options/sunos_sun4u_f77
MITgcm-checkpoint68i/tools/build_options/sunos_sun4u_f90
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MITgcm-checkpoint68i/tools/build_options/sunos_sun4u_mpf77+mpi_sunfire
MITgcm-checkpoint68i/tools/build_options/unsupported/
MITgcm-checkpoint68i/tools/build_options/unsupported/SUPER-UX_SX-6_sxmpif90+mpi_dkrz
MITgcm-checkpoint68i/tools/build_options/unsupported/SUPER-UX_SX-8_sxf90+mpi_awi
MITgcm-checkpoint68i/tools/build_options/unsupported/SUPER-UX_SX-8_sxf90_awi
MITgcm-checkpoint68i/tools/build_options/unsupported/ames_dbg+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/ames_opt+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/bgl_gnu_ncar
MITgcm-checkpoint68i/tools/build_options/unsupported/bgl_ncar
MITgcm-checkpoint68i/tools/build_options/unsupported/darwin_g77
MITgcm-checkpoint68i/tools/build_options/unsupported/darwin_ia32_gfortran+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/darwin_ia32_pgf95+mpich2-mx_trane
MITgcm-checkpoint68i/tools/build_options/unsupported/hp-ux
MITgcm-checkpoint68i/tools/build_options/unsupported/hp-ux+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/irix
MITgcm-checkpoint68i/tools/build_options/unsupported/irix+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/irix32
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64+ieee
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip27_f77
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip27_f77+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip27_f77+mpi_nas_turing
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip35+mpi_gfdl
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip35_f77
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip35_f77+mpi_mnc_gfdl
MITgcm-checkpoint68i/tools/build_options/unsupported/irix_ip30_f77
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_alpha_g77+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_gfortran+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_ifort+mpi_beagle
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_ifort+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_ifort11+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_open64+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_pathf90+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_pathf90+redhatlam
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_pgf77+mpi_ocl
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_sunf90+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_sunf90+mpi_generic+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_sunf90+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_g77+cg01
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_g77+mpi_aces
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_g77+mpi_cg01
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_gfortran+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_gfortran4.4
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifc
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifc+mpi_cg01
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort+authors
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort+mpi_aces
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort+mpi_cosmos
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort+oad
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort+oad+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort.aces
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort10.1+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort11+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort9_ocean
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_open64+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_open64.trapuv
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_pathf90+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_pgf77+authors_fc2
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MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_sunf90+mpi_generic
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MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_sunf90+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_efc+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_efc+mpi_altix
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MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_ifort+mpi_altix_jpl
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_ifort+mpi_altix_meinesz
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_ifort+mpi_altix_nas_v8
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_ifort+oad
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MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc64_xlf+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc64_xlf_bigred
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc64_xlf_bigred+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc64_xlf_ncar
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MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc_xlf+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc_xlf_bigred
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc_xlf_bigred+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/o2
MITgcm-checkpoint68i/tools/build_options/unsupported/o2+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/o2k+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/o2k_noopt
MITgcm-checkpoint68i/tools/build_options/unsupported/o2k_noopt+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/onyx
MITgcm-checkpoint68i/tools/build_options/unsupported/onyx+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1_alpha_f77
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1_alpha_f77+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1_alpha_g77
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1_halem
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MITgcm-checkpoint68i/tools/build_options/unsupported/sn3002
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MITgcm-checkpoint68i/tools/build_options/unsupported/sn7113
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MITgcm-checkpoint68i/tools/mpack-1.6/Changes
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MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_oadm.txt
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_tlm.som81.txt.gz
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_tlm.txt.gz
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/.gitignore
MITgcm-checkpoint68i/verification/verification_parser.py
MITgcm-checkpoint68i/verification/vermix/
MITgcm-checkpoint68i/verification/vermix/build/
MITgcm-checkpoint68i/verification/vermix/build/.gitignore
MITgcm-checkpoint68i/verification/vermix/code/
MITgcm-checkpoint68i/verification/vermix/code/CPP_EEOPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/verification/vermix/code/KPP_OPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/SIZE.h
MITgcm-checkpoint68i/verification/vermix/code/packages.conf
MITgcm-checkpoint68i/verification/vermix/input.dd/
MITgcm-checkpoint68i/verification/vermix/input.dd/data
MITgcm-checkpoint68i/verification/vermix/input.dd/data.kpp
MITgcm-checkpoint68i/verification/vermix/input.ggl90/
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.ggl90
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.my82/
MITgcm-checkpoint68i/verification/vermix/input.my82/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.my82/data.my82
MITgcm-checkpoint68i/verification/vermix/input.my82/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.opps/
MITgcm-checkpoint68i/verification/vermix/input.opps/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.opps/data.opps
MITgcm-checkpoint68i/verification/vermix/input.opps/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.pp81/
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pp81
MITgcm-checkpoint68i/verification/vermix/input/
MITgcm-checkpoint68i/verification/vermix/input/Qnet_72.forcing
MITgcm-checkpoint68i/verification/vermix/input/S.doublediff
MITgcm-checkpoint68i/verification/vermix/input/S.init
MITgcm-checkpoint68i/verification/vermix/input/T.doublediff
MITgcm-checkpoint68i/verification/vermix/input/TKE.init
MITgcm-checkpoint68i/verification/vermix/input/T_26.init
MITgcm-checkpoint68i/verification/vermix/input/data
MITgcm-checkpoint68i/verification/vermix/input/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input/data.kpp
MITgcm-checkpoint68i/verification/vermix/input/data.mnc
MITgcm-checkpoint68i/verification/vermix/input/data.pkg
MITgcm-checkpoint68i/verification/vermix/input/eedata
MITgcm-checkpoint68i/verification/vermix/input/gendata.m
MITgcm-checkpoint68i/verification/vermix/input/taux_72.forcing
MITgcm-checkpoint68i/verification/vermix/input/tr_checklist
MITgcm-checkpoint68i/verification/vermix/results/
MITgcm-checkpoint68i/verification/vermix/results/output.dd.txt
MITgcm-checkpoint68i/verification/vermix/results/output.ggl90.txt
MITgcm-checkpoint68i/verification/vermix/results/output.my82.txt
MITgcm-checkpoint68i/verification/vermix/results/output.opps.txt
MITgcm-checkpoint68i/verification/vermix/results/output.pp81.txt
MITgcm-checkpoint68i/verification/vermix/results/output.txt
MITgcm-checkpoint68i/verification/vermix/run/
MITgcm-checkpoint68i/verification/vermix/run/.gitignore

[41;37m   step #5: BuildMITgcm   [0m


GENMAKE :

A program for GENerating MAKEfiles for the MITgcm project.
   For a quick list of options, use "genmake2 -h"
or for more detail see the documentation, section "Building the model"
   (under "Getting Started") at:  https://mitgcm.readthedocs.io/

===  Processing options files and arguments  ===
  getting local config information:  none found
  getting OPTFILE information:
Warning: no OPTFILE specified so we'll look for possible settings

===  Searching for possible settings for OPTFILE  ===
  The platform appears to be:  linux_amd64
  The possible FORTRAN compilers found in your path are:  gfortran f77 f95 mpif77
  Setting OPTFILE to: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran
    using OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran"
    get Compiler-version: '12'
  getting AD_OPTFILE information:
    using AD_OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/adjoint_options/adjoint_default"
  check Fortran Compiler...  pass  (set FC_CHECK=5/5)
  check makedepend (local: 0, system: 1, 1)
  Turning on MPI cpp macros

===  Checking system libraries  ===
  Do we have the system() command using mpif77...  yes
  Do we have the fdate() command using mpif77...  yes
  Do we have the etime() command using mpif77... c,r: yes (SbR)
  Can we call simple C routines (here, "cloc()") using mpif77...  yes
  Can we unlimit the stack size using mpif77...  yes
  Can we register a signal handler using mpif77...  yes
  Can we use stat() through C calls...  yes
  Can we create NetCDF-enabled binaries...  no
    skip check for LAPACK Libs
  Can we call FLUSH intrinsic subroutine...  yes

===  Setting defaults  ===
  Adding MODS directories: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code 
  Making source files in eesupp from templates
  Making source files in pkg/exch2 from templates
  Making source files in pkg/regrid from templates

===  Determining package settings  ===
  getting package dependency info from  /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_depend
  getting package groups info from      /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_groups
  checking list of packages to compile:
    using PKG_LIST="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/packages.conf"
    before group expansion packages are: gfd obcs shelfice diagnostics timeave
    replacing "gfd" with:  mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor
    after group expansion packages are:  mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor obcs shelfice diagnostics timeave
  applying DISABLE settings
  applying ENABLE settings
    packages are:  debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave
  applying package dependency rules
    packages are:  debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave
  Adding STANDARDDIRS='eesupp model'
  Searching for *OPTIONS.h files in order to warn about the presence
    of "#define "-type statements that are no longer allowed:
    found CPP_EEOPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h"
    found CPP_OPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h"
  Creating the list of files for the adjoint compiler.

===  Creating the Makefile  ===
  setting INCLUDES
  Determining the list of source and include files
  Writing makefile: Makefile
  Add the source list for AD code generation
  Making list of "exceptions" that need ".p" files
  Making list of NOOPTFILES
  Add rules for links
  Adding makedepend marker

===  Done  ===
  original 'Makefile' generated successfully
=> next steps:
  > make depend
  > make       (<-- to generate executable)
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build'
if [ ! -L cpl_issm.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/cpl_issm.F cpl_issm.F; fi
if [ ! -L do_oceanic_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/do_oceanic_phys.F do_oceanic_phys.F; fi
if [ ! -L eeboot_minimal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eeboot_minimal.F eeboot_minimal.F; fi
if [ ! -L eedie.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eedie.F eedie.F; fi
if [ ! -L chksum_tiled.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/chksum_tiled.F chksum_tiled.F; fi
if [ ! -L debug_call.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_call.F debug_call.F; fi
if [ ! -L debug_cs_corner_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_cs_corner_uv.F debug_cs_corner_uv.F; fi
if [ ! -L debug_enter.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_enter.F debug_enter.F; fi
if [ ! -L debug_fld_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rl.F debug_fld_stats_rl.F; fi
if [ ! -L debug_fld_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rs.F debug_fld_stats_rs.F; fi
if [ ! -L debug_leave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_leave.F debug_leave.F; fi
if [ ! -L debug_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_msg.F debug_msg.F; fi
if [ ! -L debug_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rl.F debug_stats_rl.F; fi
if [ ! -L debug_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rs.F debug_stats_rs.F; fi
if [ ! -L fill_in_corners_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/fill_in_corners_rl.F fill_in_corners_rl.F; fi
if [ ! -L write_fullarray_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rl.F write_fullarray_rl.F; fi
if [ ! -L write_fullarray_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rs.F write_fullarray_rs.F; fi
if [ ! -L diag_calc_psivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_calc_psivel.F diag_calc_psivel.F; fi
if [ ! -L diag_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_cg2d.F diag_cg2d.F; fi
if [ ! -L diagnostics_addtolist.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_addtolist.F diagnostics_addtolist.F; fi
if [ ! -L diagnostics_calc_phivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_calc_phivel.F diagnostics_calc_phivel.F; fi
if [ ! -L diagnostics_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_check.F diagnostics_check.F; fi
if [ ! -L diagnostics_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_clear.F diagnostics_clear.F; fi
if [ ! -L diagnostics_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill.F diagnostics_fill.F; fi
if [ ! -L diagnostics_fill_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_field.F diagnostics_fill_field.F; fi
if [ ! -L diagnostics_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_rs.F diagnostics_fill_rs.F; fi
if [ ! -L diagnostics_fill_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_state.F diagnostics_fill_state.F; fi
if [ ! -L diagnostics_fract_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fract_fill.F diagnostics_fract_fill.F; fi
if [ ! -L diagnostics_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_ini_io.F diagnostics_ini_io.F; fi
if [ ! -L diagnostics_init_early.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_early.F diagnostics_init_early.F; fi
if [ ! -L diagnostics_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_fixed.F diagnostics_init_fixed.F; fi
if [ ! -L diagnostics_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_varia.F diagnostics_init_varia.F; fi
if [ ! -L diagnostics_interp_p2p.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_p2p.F diagnostics_interp_p2p.F; fi
if [ ! -L diagnostics_interp_vert.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_vert.F diagnostics_interp_vert.F; fi
if [ ! -L diagnostics_is_on.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_is_on.F diagnostics_is_on.F; fi
if [ ! -L diagnostics_list_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_list_check.F diagnostics_list_check.F; fi
if [ ! -L diagnostics_main_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_main_init.F diagnostics_main_init.F; fi
if [ ! -L diagnostics_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_mnc_out.F diagnostics_mnc_out.F; fi
if [ ! -L diagnostics_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_out.F diagnostics_out.F; fi
if [ ! -L diagnostics_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_readparms.F diagnostics_readparms.F; fi
if [ ! -L diagnostics_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_read_pickup.F diagnostics_read_pickup.F; fi
if [ ! -L diagnostics_scale_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill.F diagnostics_scale_fill.F; fi
if [ ! -L diagnostics_scale_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill_rs.F diagnostics_scale_fill_rs.F; fi
if [ ! -L diagnostics_set_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_calc.F diagnostics_set_calc.F; fi
if [ ! -L diagnostics_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_setdiag.F diagnostics_setdiag.F; fi
if [ ! -L diagnostics_set_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_levels.F diagnostics_set_levels.F; fi
if [ ! -L diagnostics_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_pointers.F diagnostics_set_pointers.F; fi
if [ ! -L diagnostics_status_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_status_error.F diagnostics_status_error.F; fi
if [ ! -L diagnostics_sum_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_sum_levels.F diagnostics_sum_levels.F; fi
if [ ! -L diagnostics_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_summary.F diagnostics_summary.F; fi
if [ ! -L diagnostics_switch_onoff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_switch_onoff.F diagnostics_switch_onoff.F; fi
if [ ! -L diagnostics_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_utils.F diagnostics_utils.F; fi
if [ ! -L diagnostics_write_adj.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_adj.F diagnostics_write_adj.F; fi
if [ ! -L diagnostics_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write.F diagnostics_write.F; fi
if [ ! -L diagnostics_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_pickup.F diagnostics_write_pickup.F; fi
if [ ! -L diagstats_ascii_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ascii_out.F diagstats_ascii_out.F; fi
if [ ! -L diagstats_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_calc.F diagstats_calc.F; fi
if [ ! -L diagstats_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_clear.F diagstats_clear.F; fi
if [ ! -L diagstats_close_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_close_io.F diagstats_close_io.F; fi
if [ ! -L diagstats_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_fill.F diagstats_fill.F; fi
if [ ! -L diagstats_global.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_global.F diagstats_global.F; fi
if [ ! -L diagstats_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ini_io.F diagstats_ini_io.F; fi
if [ ! -L diagstats_local.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_local.F diagstats_local.F; fi
if [ ! -L diagstats_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_mnc_out.F diagstats_mnc_out.F; fi
if [ ! -L diagstats_others_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_others_calc.F diagstats_others_calc.F; fi
if [ ! -L diagstats_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_output.F diagstats_output.F; fi
if [ ! -L diagstats_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_setdiag.F diagstats_setdiag.F; fi
if [ ! -L diagstats_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_pointers.F diagstats_set_pointers.F; fi
if [ ! -L diagstats_set_regions.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_regions.F diagstats_set_regions.F; fi
if [ ! -L diag_vegtile_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_vegtile_fill.F diag_vegtile_fill.F; fi
if [ ! -L gad_advection.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advection.F gad_advection.F; fi
if [ ! -L gad_advscheme.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advscheme.F gad_advscheme.F; fi
if [ ! -L gad_biharm_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_r.F gad_biharm_r.F; fi
if [ ! -L gad_biharm_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_x.F gad_biharm_x.F; fi
if [ ! -L gad_biharm_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_y.F gad_biharm_y.F; fi
if [ ! -L gad_c2_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_r.F gad_c2_adv_r.F; fi
if [ ! -L gad_c2_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_x.F gad_c2_adv_x.F; fi
if [ ! -L gad_c2_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_y.F gad_c2_adv_y.F; fi
if [ ! -L gad_c2_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_impl_r.F gad_c2_impl_r.F; fi
if [ ! -L gad_c4_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_r.F gad_c4_adv_r.F; fi
if [ ! -L gad_c4_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_x.F gad_c4_adv_x.F; fi
if [ ! -L gad_c4_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_y.F gad_c4_adv_y.F; fi
if [ ! -L gad_calc_rhs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_calc_rhs.F gad_calc_rhs.F; fi
if [ ! -L gad_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_check.F gad_check.F; fi
if [ ! -L gad_del2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_del2.F gad_del2.F; fi
if [ ! -L gad_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_init.F gad_diagnostics_init.F; fi
if [ ! -L gad_diagnostics_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_state.F gad_diagnostics_state.F; fi
if [ ! -L gad_diff_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_r.F gad_diff_r.F; fi
if [ ! -L gad_diff_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_x.F gad_diff_x.F; fi
if [ ! -L gad_diff_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_y.F gad_diff_y.F; fi
if [ ! -L gad_dst2u1_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_r.F gad_dst2u1_adv_r.F; fi
if [ ! -L gad_dst2u1_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_x.F gad_dst2u1_adv_x.F; fi
if [ ! -L gad_dst2u1_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_y.F gad_dst2u1_adv_y.F; fi
if [ ! -L gad_dst2u1_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_impl_r.F gad_dst2u1_impl_r.F; fi
if [ ! -L gad_dst3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_r.F gad_dst3_adv_r.F; fi
if [ ! -L gad_dst3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_x.F gad_dst3_adv_x.F; fi
if [ ! -L gad_dst3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_y.F gad_dst3_adv_y.F; fi
if [ ! -L gad_dst3fl_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_r.F gad_dst3fl_adv_r.F; fi
if [ ! -L gad_dst3fl_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_x.F gad_dst3fl_adv_x.F; fi
if [ ! -L gad_dst3fl_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_y.F gad_dst3fl_adv_y.F; fi
if [ ! -L gad_dst3fl_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_impl_r.F gad_dst3fl_impl_r.F; fi
if [ ! -L gad_exch_som.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_exch_som.F gad_exch_som.F; fi
if [ ! -L gad_fluxlimit_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_r.F gad_fluxlimit_adv_r.F; fi
if [ ! -L gad_fluxlimit_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_x.F gad_fluxlimit_adv_x.F; fi
if [ ! -L gad_fluxlimit_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_y.F gad_fluxlimit_adv_y.F; fi
if [ ! -L gad_fluxlimit_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_impl_r.F gad_fluxlimit_impl_r.F; fi
if [ ! -L gad_grad_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_x.F gad_grad_x.F; fi
if [ ! -L gad_grad_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_y.F gad_grad_y.F; fi
if [ ! -L gad_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_implicit_r.F gad_implicit_r.F; fi
if [ ! -L gad_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_fixed.F gad_init_fixed.F; fi
if [ ! -L gad_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_varia.F gad_init_varia.F; fi
if [ ! -L gad_os7mp_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_r.F gad_os7mp_adv_r.F; fi
if [ ! -L gad_os7mp_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_x.F gad_os7mp_adv_x.F; fi
if [ ! -L gad_os7mp_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_y.F gad_os7mp_adv_y.F; fi
if [ ! -L gad_osc_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_r.F gad_osc_hat_r.F; fi
if [ ! -L gad_osc_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_x.F gad_osc_hat_x.F; fi
if [ ! -L gad_osc_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_y.F gad_osc_hat_y.F; fi
if [ ! -L gad_osc_mul_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_r.F gad_osc_mul_r.F; fi
if [ ! -L gad_osc_mul_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_x.F gad_osc_mul_x.F; fi
if [ ! -L gad_osc_mul_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_y.F gad_osc_mul_y.F; fi
if [ ! -L gad_plm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_plm_fun.F gad_plm_fun.F; fi
if [ ! -L gad_ppm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_r.F gad_ppm_adv_r.F; fi
if [ ! -L gad_ppm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_x.F gad_ppm_adv_x.F; fi
if [ ! -L gad_ppm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_y.F gad_ppm_adv_y.F; fi
if [ ! -L gad_ppm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_r.F gad_ppm_flx_r.F; fi
if [ ! -L gad_ppm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_x.F gad_ppm_flx_x.F; fi
if [ ! -L gad_ppm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_y.F gad_ppm_flx_y.F; fi
if [ ! -L gad_ppm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_fun.F gad_ppm_fun.F; fi
if [ ! -L gad_ppm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_r.F gad_ppm_hat_r.F; fi
if [ ! -L gad_ppm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_x.F gad_ppm_hat_x.F; fi
if [ ! -L gad_ppm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_y.F gad_ppm_hat_y.F; fi
if [ ! -L gad_ppm_p3e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_r.F gad_ppm_p3e_r.F; fi
if [ ! -L gad_ppm_p3e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_x.F gad_ppm_p3e_x.F; fi
if [ ! -L gad_ppm_p3e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_y.F gad_ppm_p3e_y.F; fi
if [ ! -L gad_pqm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_r.F gad_pqm_adv_r.F; fi
if [ ! -L gad_pqm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_x.F gad_pqm_adv_x.F; fi
if [ ! -L gad_pqm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_y.F gad_pqm_adv_y.F; fi
if [ ! -L gad_pqm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_r.F gad_pqm_flx_r.F; fi
if [ ! -L gad_pqm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_x.F gad_pqm_flx_x.F; fi
if [ ! -L gad_pqm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_y.F gad_pqm_flx_y.F; fi
if [ ! -L gad_pqm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_fun.F gad_pqm_fun.F; fi
if [ ! -L gad_pqm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_r.F gad_pqm_hat_r.F; fi
if [ ! -L gad_pqm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_x.F gad_pqm_hat_x.F; fi
if [ ! -L gad_pqm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_y.F gad_pqm_hat_y.F; fi
if [ ! -L gad_pqm_p5e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_r.F gad_pqm_p5e_r.F; fi
if [ ! -L gad_pqm_p5e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_x.F gad_pqm_p5e_x.F; fi
if [ ! -L gad_pqm_p5e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_y.F gad_pqm_p5e_y.F; fi
if [ ! -L gad_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_read_pickup.F gad_read_pickup.F; fi
if [ ! -L gad_som_advect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_advect.F gad_som_advect.F; fi
if [ ! -L gad_som_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_r.F gad_som_adv_r.F; fi
if [ ! -L gad_som_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_x.F gad_som_adv_x.F; fi
if [ ! -L gad_som_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_y.F gad_som_adv_y.F; fi
if [ ! -L gad_som_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_exchanges.F gad_som_exchanges.F; fi
if [ ! -L gad_som_fill_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_fill_cs_corner.F gad_som_fill_cs_corner.F; fi
if [ ! -L gad_som_lim_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_lim_r.F gad_som_lim_r.F; fi
if [ ! -L gad_som_prep_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_prep_cs_corner.F gad_som_prep_cs_corner.F; fi
if [ ! -L gad_u3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_r.F gad_u3_adv_r.F; fi
if [ ! -L gad_u3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_x.F gad_u3_adv_x.F; fi
if [ ! -L gad_u3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_y.F gad_u3_adv_y.F; fi
if [ ! -L gad_u3c4_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3c4_impl_r.F gad_u3c4_impl_r.F; fi
if [ ! -L gad_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_write_pickup.F gad_write_pickup.F; fi
if [ ! -L salt_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/salt_fill.F salt_fill.F; fi
if [ ! -L mdsio_buffertorl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertorl.F mdsio_buffertorl.F; fi
if [ ! -L mdsio_buffertors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertors.F mdsio_buffertors.F; fi
if [ ! -L mdsio_check4file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_check4file.F mdsio_check4file.F; fi
if [ ! -L mdsio_facef_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_facef_read.F mdsio_facef_read.F; fi
if [ ! -L mdsio_gl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl.F mdsio_gl.F; fi
if [ ! -L mdsio_gl_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl_slice.F mdsio_gl_slice.F; fi
if [ ! -L mdsio_pass_r4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4torl.F mdsio_pass_r4torl.F; fi
if [ ! -L mdsio_pass_r4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4tors.F mdsio_pass_r4tors.F; fi
if [ ! -L mdsio_pass_r8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8torl.F mdsio_pass_r8torl.F; fi
if [ ! -L mdsio_pass_r8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8tors.F mdsio_pass_r8tors.F; fi
if [ ! -L mdsio_rd_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rl.F mdsio_rd_rec_rl.F; fi
if [ ! -L mdsio_rd_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rs.F mdsio_rd_rec_rs.F; fi
if [ ! -L mdsio_read_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_field.F mdsio_read_field.F; fi
if [ ! -L mdsio_read_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_meta.F mdsio_read_meta.F; fi
if [ ! -L mdsio_read_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_section.F mdsio_read_section.F; fi
if [ ! -L mdsio_read_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_tape.F mdsio_read_tape.F; fi
if [ ! -L mdsio_readvec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_readvec_loc.F mdsio_readvec_loc.F; fi
if [ ! -L mdsio_read_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_whalos.F mdsio_read_whalos.F; fi
if [ ! -L mdsio_rw_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_field.F mdsio_rw_field.F; fi
if [ ! -L mdsio_rw_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_slice.F mdsio_rw_slice.F; fi
if [ ! -L mdsio_seg4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4torl.F mdsio_seg4torl.F; fi
if [ ! -L mdsio_seg4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4tors.F mdsio_seg4tors.F; fi
if [ ! -L mdsio_seg8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8torl.F mdsio_seg8torl.F; fi
if [ ! -L mdsio_seg8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8tors.F mdsio_seg8tors.F; fi
if [ ! -L mdsio_segxtorx_2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_segxtorx_2d.F mdsio_segxtorx_2d.F; fi
if [ ! -L mdsio_write_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_field.F mdsio_write_field.F; fi
if [ ! -L mdsio_writelocal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writelocal.F mdsio_writelocal.F; fi
if [ ! -L mdsio_write_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_meta.F mdsio_write_meta.F; fi
if [ ! -L mdsio_write_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_section.F mdsio_write_section.F; fi
if [ ! -L mdsio_write_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_tape.F mdsio_write_tape.F; fi
if [ ! -L mdsio_writevec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writevec_loc.F mdsio_writevec_loc.F; fi
if [ ! -L mdsio_write_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_whalos.F mdsio_write_whalos.F; fi
if [ ! -L mdsio_wr_metafiles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_metafiles.F mdsio_wr_metafiles.F; fi
if [ ! -L mdsio_wr_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rl.F mdsio_wr_rec_rl.F; fi
if [ ! -L mdsio_wr_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rs.F mdsio_wr_rec_rs.F; fi
if [ ! -L mom_calc_3d_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_3d_strain.F mom_calc_3d_strain.F; fi
if [ ! -L mom_calc_absvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_absvort3.F mom_calc_absvort3.F; fi
if [ ! -L mom_calc_hdiv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hdiv.F mom_calc_hdiv.F; fi
if [ ! -L mom_calc_hfacz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hfacz.F mom_calc_hfacz.F; fi
if [ ! -L mom_calc_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_ke.F mom_calc_ke.F; fi
if [ ! -L mom_calc_relvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_relvort3.F mom_calc_relvort3.F; fi
if [ ! -L mom_calc_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_smag_3d.F mom_calc_smag_3d.F; fi
if [ ! -L mom_calc_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_strain.F mom_calc_strain.F; fi
if [ ! -L mom_calc_tension.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_tension.F mom_calc_tension.F; fi
if [ ! -L mom_calc_visc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_visc.F mom_calc_visc.F; fi
if [ ! -L mom_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_diagnostics_init.F mom_diagnostics_init.F; fi
if [ ! -L mom_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_hdissip.F mom_hdissip.F; fi
if [ ! -L mom_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_init_fixed.F mom_init_fixed.F; fi
if [ ! -L mom_quasihydrostatic.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_quasihydrostatic.F mom_quasihydrostatic.F; fi
if [ ! -L mom_u_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_botdrag_coeff.F mom_u_botdrag_coeff.F; fi
if [ ! -L mom_u_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_coriolis_nh.F mom_u_coriolis_nh.F; fi
if [ ! -L mom_u_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_implicit_r.F mom_u_implicit_r.F; fi
if [ ! -L mom_u_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_metric_nh.F mom_u_metric_nh.F; fi
if [ ! -L mom_u_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_rviscflux.F mom_u_rviscflux.F; fi
if [ ! -L mom_u_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_sidedrag.F mom_u_sidedrag.F; fi
if [ ! -L mom_uv_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_uv_smag_3d.F mom_uv_smag_3d.F; fi
if [ ! -L mom_v_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_botdrag_coeff.F mom_v_botdrag_coeff.F; fi
if [ ! -L mom_v_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_coriolis_nh.F mom_v_coriolis_nh.F; fi
if [ ! -L mom_v_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_implicit_r.F mom_v_implicit_r.F; fi
if [ ! -L mom_visc_qgl_limit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_limit.F mom_visc_qgl_limit.F; fi
if [ ! -L mom_visc_qgl_stretch.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_stretch.F mom_visc_qgl_stretch.F; fi
if [ ! -L mom_v_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_metric_nh.F mom_v_metric_nh.F; fi
if [ ! -L mom_v_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_rviscflux.F mom_v_rviscflux.F; fi
if [ ! -L mom_v_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_sidedrag.F mom_v_sidedrag.F; fi
if [ ! -L mom_w_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_coriolis_nh.F mom_w_coriolis_nh.F; fi
if [ ! -L mom_w_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_metric_nh.F mom_w_metric_nh.F; fi
if [ ! -L mom_w_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_sidedrag.F mom_w_sidedrag.F; fi
if [ ! -L mom_w_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_smag_3d.F mom_w_smag_3d.F; fi
if [ ! -L mom_calc_rtrans.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_calc_rtrans.F mom_calc_rtrans.F; fi
if [ ! -L mom_fluxform.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_fluxform.F mom_fluxform.F; fi
if [ ! -L mom_u_adv_uu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_uu.F mom_u_adv_uu.F; fi
if [ ! -L mom_u_adv_vu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_vu.F mom_u_adv_vu.F; fi
if [ ! -L mom_u_adv_wu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_wu.F mom_u_adv_wu.F; fi
if [ ! -L mom_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_coriolis.F mom_u_coriolis.F; fi
if [ ! -L mom_u_del2u.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_del2u.F mom_u_del2u.F; fi
if [ ! -L mom_u_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_cylinder.F mom_u_metric_cylinder.F; fi
if [ ! -L mom_u_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_sphere.F mom_u_metric_sphere.F; fi
if [ ! -L mom_uv_boundary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_uv_boundary.F mom_uv_boundary.F; fi
if [ ! -L mom_u_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_xviscflux.F mom_u_xviscflux.F; fi
if [ ! -L mom_u_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_yviscflux.F mom_u_yviscflux.F; fi
if [ ! -L mom_v_adv_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_uv.F mom_v_adv_uv.F; fi
if [ ! -L mom_v_adv_vv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_vv.F mom_v_adv_vv.F; fi
if [ ! -L mom_v_adv_wv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_wv.F mom_v_adv_wv.F; fi
if [ ! -L mom_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_coriolis.F mom_v_coriolis.F; fi
if [ ! -L mom_v_del2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_del2v.F mom_v_del2v.F; fi
if [ ! -L mom_v_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_cylinder.F mom_v_metric_cylinder.F; fi
if [ ! -L mom_v_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_sphere.F mom_v_metric_sphere.F; fi
if [ ! -L mom_v_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_xviscflux.F mom_v_xviscflux.F; fi
if [ ! -L mom_v_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_yviscflux.F mom_v_yviscflux.F; fi
if [ ! -L mom_vecinv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vecinv.F mom_vecinv.F; fi
if [ ! -L mom_vi_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_coriolis.F mom_vi_coriolis.F; fi
if [ ! -L mom_vi_del2uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_del2uv.F mom_vi_del2uv.F; fi
if [ ! -L mom_vi_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_hdissip.F mom_vi_hdissip.F; fi
if [ ! -L mom_vi_u_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F mom_vi_u_coriolis_c4.F; fi
if [ ! -L mom_vi_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis.F mom_vi_u_coriolis.F; fi
if [ ! -L mom_vi_u_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_grad_ke.F mom_vi_u_grad_ke.F; fi
if [ ! -L mom_vi_u_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_vertshear.F mom_vi_u_vertshear.F; fi
if [ ! -L mom_vi_v_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F mom_vi_v_coriolis_c4.F; fi
if [ ! -L mom_vi_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis.F mom_vi_v_coriolis.F; fi
if [ ! -L mom_vi_v_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_grad_ke.F mom_vi_v_grad_ke.F; fi
if [ ! -L mom_vi_v_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_vertshear.F mom_vi_v_vertshear.F; fi
if [ ! -L mon_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcfl.F mon_advcfl.F; fi
if [ ! -L mon_advcflw2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw2.F mon_advcflw2.F; fi
if [ ! -L mon_advcflw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw.F mon_advcflw.F; fi
if [ ! -L mon_calc_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_advcfl.F mon_calc_advcfl.F; fi
if [ ! -L mon_calc_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rl.F mon_calc_stats_rl.F; fi
if [ ! -L mon_calc_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rs.F mon_calc_stats_rs.F; fi
if [ ! -L mon_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_init.F mon_init.F; fi
if [ ! -L monitor_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_ad.F monitor_ad.F; fi
if [ ! -L monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor.F monitor.F; fi
if [ ! -L monitor_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_g.F monitor_g.F; fi
if [ ! -L mon_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_ke.F mon_ke.F; fi
if [ ! -L mon_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_out.F mon_out.F; fi
if [ ! -L mon_printstats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rl.F mon_printstats_rl.F; fi
if [ ! -L mon_printstats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rs.F mon_printstats_rs.F; fi
if [ ! -L mon_set_iounit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_iounit.F mon_set_iounit.F; fi
if [ ! -L mon_set_pref.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_pref.F mon_set_pref.F; fi
if [ ! -L mon_solution.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_solution.F mon_solution.F; fi
if [ ! -L mon_stats_latbnd_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_latbnd_rl.F mon_stats_latbnd_rl.F; fi
if [ ! -L mon_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rl.F mon_stats_rl.F; fi
if [ ! -L mon_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rs.F mon_stats_rs.F; fi
if [ ! -L mon_surfcor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_surfcor.F mon_surfcor.F; fi
if [ ! -L mon_vort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_vort3.F mon_vort3.F; fi
if [ ! -L mon_writestats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rl.F mon_writestats_rl.F; fi
if [ ! -L mon_writestats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rs.F mon_writestats_rs.F; fi
if [ ! -L obcs_add_tides.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_add_tides.F obcs_add_tides.F; fi
if [ ! -L obcs_adjust.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust.F obcs_adjust.F; fi
if [ ! -L obcs_adjust_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust_uvice.F obcs_adjust_uvice.F; fi
if [ ! -L obcs_apply_eta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_eta.F obcs_apply_eta.F; fi
if [ ! -L obcs_apply_ptracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ptracer.F obcs_apply_ptracer.F; fi
if [ ! -L obcs_apply_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_r_star.F obcs_apply_r_star.F; fi
if [ ! -L obcs_apply_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_seaice.F obcs_apply_seaice.F; fi
if [ ! -L obcs_apply_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_surf_dr.F obcs_apply_surf_dr.F; fi
if [ ! -L obcs_apply_ts.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ts.F obcs_apply_ts.F; fi
if [ ! -L obcs_apply_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uv.F obcs_apply_uv.F; fi
if [ ! -L obcs_apply_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uvice.F obcs_apply_uvice.F; fi
if [ ! -L obcs_apply_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_w.F obcs_apply_w.F; fi
if [ ! -L obcs_balance_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_balance_flow.F obcs_balance_flow.F; fi
if [ ! -L obcs_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc.F obcs_calc.F; fi
if [ ! -L obcs_calc_stevens.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc_stevens.F obcs_calc_stevens.F; fi
if [ ! -L obcs_check_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check_depths.F obcs_check_depths.F; fi
if [ ! -L obcs_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check.F obcs_check.F; fi
if [ ! -L obcs_copy_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_tracer.F obcs_copy_tracer.F; fi
if [ ! -L obcs_copy_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_uv_n.F obcs_copy_uv_n.F; fi
if [ ! -L obcs_diag_balance.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_diag_balance.F obcs_diag_balance.F; fi
if [ ! -L obcs_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exchanges.F obcs_exchanges.F; fi
if [ ! -L obcs_exf_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exf_load.F obcs_exf_load.F; fi
if [ ! -L obcs_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_fields_load.F obcs_fields_load.F; fi
if [ ! -L obcs_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_fixed.F obcs_init_fixed.F; fi
if [ ! -L obcs_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_variables.F obcs_init_variables.F; fi
if [ ! -L obcs_monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_monitor.F obcs_monitor.F; fi
if [ ! -L obcs_mon_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_mon_stats.F obcs_mon_stats.F; fi
if [ ! -L obcs_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_output.F obcs_output.F; fi
if [ ! -L obcs_prescribe_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_prescribe_read.F obcs_prescribe_read.F; fi
if [ ! -L obcs_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_readparms.F obcs_readparms.F; fi
if [ ! -L obcs_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_read_pickup.F obcs_read_pickup.F; fi
if [ ! -L obcs_save_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_save_uv_n.F obcs_save_uv_n.F; fi
if [ ! -L obcs_seaice_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_seaice_sponge.F obcs_seaice_sponge.F; fi
if [ ! -L obcs_set_connect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_set_connect.F obcs_set_connect.F; fi
if [ ! -L obcs_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_sponge.F obcs_sponge.F; fi
if [ ! -L obcs_u1_adv_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_u1_adv_tracer.F obcs_u1_adv_tracer.F; fi
if [ ! -L obcs_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_write_pickup.F obcs_write_pickup.F; fi
if [ ! -L orlanski_east.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_east.F orlanski_east.F; fi
if [ ! -L orlanski_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_init.F orlanski_init.F; fi
if [ ! -L orlanski_north.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_north.F orlanski_north.F; fi
if [ ! -L orlanski_south.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_south.F orlanski_south.F; fi
if [ ! -L orlanski_west.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_west.F orlanski_west.F; fi
if [ ! -L get_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/get_write_global_fld.F get_write_global_fld.F; fi
if [ ! -L read_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rl.F read_fld_xy_rl.F; fi
if [ ! -L read_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rs.F read_fld_xy_rs.F; fi
if [ ! -L read_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rl.F read_fld_xyz_rl.F; fi
if [ ! -L read_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rs.F read_fld_xyz_rs.F; fi
if [ ! -L read_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rl.F read_glvec_rl.F; fi
if [ ! -L read_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rs.F read_glvec_rs.F; fi
if [ ! -L read_mflds.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_mflds.F read_mflds.F; fi
if [ ! -L read_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_rec.F read_rec.F; fi
if [ ! -L rw_get_suffix.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/rw_get_suffix.F rw_get_suffix.F; fi
if [ ! -L set_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/set_write_global_fld.F set_write_global_fld.F; fi
if [ ! -L write_fld_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rl.F write_fld_3d_rl.F; fi
if [ ! -L write_fld_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rs.F write_fld_3d_rs.F; fi
if [ ! -L write_fld_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rl.F write_fld_s3d_rl.F; fi
if [ ! -L write_fld_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rs.F write_fld_s3d_rs.F; fi
if [ ! -L write_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rl.F write_fld_xy_rl.F; fi
if [ ! -L write_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rs.F write_fld_xy_rs.F; fi
if [ ! -L write_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rl.F write_fld_xyz_rl.F; fi
if [ ! -L write_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rs.F write_fld_xyz_rs.F; fi
if [ ! -L write_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rl.F write_glvec_rl.F; fi
if [ ! -L write_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rs.F write_glvec_rs.F; fi
if [ ! -L write_local_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rl.F write_local_rl.F; fi
if [ ! -L write_local_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rs.F write_local_rs.F; fi
if [ ! -L write_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_rec.F write_rec.F; fi
if [ ! -L shelfice_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_check.F shelfice_check.F; fi
if [ ! -L shelfice_cost_accumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_accumulate.F shelfice_cost_accumulate.F; fi
if [ ! -L shelfice_cost_final.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_final.F shelfice_cost_final.F; fi
if [ ! -L shelfice_cost_shifwflx.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_shifwflx.F shelfice_cost_shifwflx.F; fi
if [ ! -L shelfice_diagnostics_drag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_diagnostics_drag.F shelfice_diagnostics_drag.F; fi
if [ ! -L shelfice_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing.F shelfice_forcing.F; fi
if [ ! -L shelfice_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing_surf.F shelfice_forcing_surf.F; fi
if [ ! -L shelfice_init_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_depths.F shelfice_init_depths.F; fi
if [ ! -L shelfice_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_fixed.F shelfice_init_fixed.F; fi
if [ ! -L shelfice_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_varia.F shelfice_init_varia.F; fi
if [ ! -L shelfice_mask_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mask_seaice.F shelfice_mask_seaice.F; fi
if [ ! -L shelfice_mnc_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mnc_init.F shelfice_mnc_init.F; fi
if [ ! -L shelfice_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_output.F shelfice_output.F; fi
if [ ! -L shelfice_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_readparms.F shelfice_readparms.F; fi
if [ ! -L shelfice_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_read_pickup.F shelfice_read_pickup.F; fi
if [ ! -L shelfice_remesh_calc_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_calc_w.F shelfice_remesh_calc_w.F; fi
if [ ! -L shelfice_remesh_c_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_c_mask.F shelfice_remesh_c_mask.F; fi
if [ ! -L shelfice_remeshing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remeshing.F shelfice_remeshing.F; fi
if [ ! -L shelfice_remesh_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_state.F shelfice_remesh_state.F; fi
if [ ! -L shelfice_remesh_uv_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_uv_mask.F shelfice_remesh_uv_mask.F; fi
if [ ! -L shelfice_step_icemass.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_step_icemass.F shelfice_step_icemass.F; fi
if [ ! -L shelfice_thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_thermodynamics.F shelfice_thermodynamics.F; fi
if [ ! -L shelfice_u_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_u_drag_coeff.F shelfice_u_drag_coeff.F; fi
if [ ! -L shelfice_v_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_v_drag_coeff.F shelfice_v_drag_coeff.F; fi
if [ ! -L shelfice_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_write_pickup.F shelfice_write_pickup.F; fi
if [ ! -L timeave_cumul_1k1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1k1t.F timeave_cumul_1k1t.F; fi
if [ ! -L timeave_cumul_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1t.F timeave_cumul_1t.F; fi
if [ ! -L timeave_cumul_1vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1vfc.F timeave_cumul_1vfc.F; fi
if [ ! -L timeave_cumul_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2v.F timeave_cumul_2v.F; fi
if [ ! -L timeave_cumul_2vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2vfc.F timeave_cumul_2vfc.F; fi
if [ ! -L timeave_cumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumulate.F timeave_cumulate.F; fi
if [ ! -L timeave_cumul_dif_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_dif_1t.F timeave_cumul_dif_1t.F; fi
if [ ! -L timeave_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_init_fixed.F timeave_init_fixed.F; fi
if [ ! -L timeave_norma_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_norma_2v.F timeave_norma_2v.F; fi
if [ ! -L timeave_normalize.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_normalize.F timeave_normalize.F; fi
if [ ! -L timeave_reset.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_reset.F timeave_reset.F; fi
if [ ! -L timeave_statvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statvars.F timeave_statvars.F; fi
if [ ! -L timeave_statv_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statv_write.F timeave_statv_write.F; fi
if [ ! -L timeave_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_surf_flux.F timeave_surf_flux.F; fi
if [ ! -L all_proc_die.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/all_proc_die.F all_proc_die.F; fi
if [ ! -L bar2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar2.F bar2.F; fi
if [ ! -L bar_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar_check.F bar_check.F; fi
if [ ! -L barrier.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/barrier.F barrier.F; fi
if [ ! -L check_threads.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/check_threads.F check_threads.F; fi
if [ ! -L comm_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/comm_stats.F comm_stats.F; fi
if [ ! -L cumulsum_z_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/cumulsum_z_tile.F cumulsum_z_tile.F; fi
if [ ! -L different_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/different_multiple.F different_multiple.F; fi
if [ ! -L diff_phase_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/diff_phase_multiple.F diff_phase_multiple.F; fi
if [ ! -L eeboot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeboot.F eeboot.F; fi
if [ ! -L eedata_example.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eedata_example.F eedata_example.F; fi
if [ ! -L eeintro_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeintro_msg.F eeintro_msg.F; fi
if [ ! -L eeset_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeset_parms.F eeset_parms.F; fi
if [ ! -L eewrite_eeenv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eewrite_eeenv.F eewrite_eeenv.F; fi
if [ ! -L exch0_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r4.F exch0_r4.F; fi
if [ ! -L exch0_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r8.F exch0_r8.F; fi
if [ ! -L exch0_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rl.F exch0_rl.F; fi
if [ ! -L exch0_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rs.F exch0_rs.F; fi
if [ ! -L exch1_bg_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r4_cube.F exch1_bg_r4_cube.F; fi
if [ ! -L exch1_bg_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r8_cube.F exch1_bg_r8_cube.F; fi
if [ ! -L exch1_bg_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rl_cube.F exch1_bg_rl_cube.F; fi
if [ ! -L exch1_bg_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rs_cube.F exch1_bg_rs_cube.F; fi
if [ ! -L exch1_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4_cube.F exch1_r4_cube.F; fi
if [ ! -L exch1_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4.F exch1_r4.F; fi
if [ ! -L exch1_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8_cube.F exch1_r8_cube.F; fi
if [ ! -L exch1_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8.F exch1_r8.F; fi
if [ ! -L exch1_rl_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_ad.F exch1_rl_ad.F; fi
if [ ! -L exch1_rl_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube_ad.F exch1_rl_cube_ad.F; fi
if [ ! -L exch1_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube.F exch1_rl_cube.F; fi
if [ ! -L exch1_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl.F exch1_rl.F; fi
if [ ! -L exch1_rs_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_ad.F exch1_rs_ad.F; fi
if [ ! -L exch1_rs_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube_ad.F exch1_rs_cube_ad.F; fi
if [ ! -L exch1_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube.F exch1_rs_cube.F; fi
if [ ! -L exch1_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs.F exch1_rs.F; fi
if [ ! -L exch1_uv_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r4_cube.F exch1_uv_r4_cube.F; fi
if [ ! -L exch1_uv_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r8_cube.F exch1_uv_r8_cube.F; fi
if [ ! -L exch1_uv_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rl_cube.F exch1_uv_rl_cube.F; fi
if [ ! -L exch1_uv_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rs_cube.F exch1_uv_rs_cube.F; fi
if [ ! -L exch1_z_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r4_cube.F exch1_z_r4_cube.F; fi
if [ ! -L exch1_z_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r8_cube.F exch1_z_r8_cube.F; fi
if [ ! -L exch1_z_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rl_cube.F exch1_z_rl_cube.F; fi
if [ ! -L exch1_z_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rs_cube.F exch1_z_rs_cube.F; fi
if [ ! -L exch_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r4.F exch_3d_r4.F; fi
if [ ! -L exch_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r8.F exch_3d_r8.F; fi
if [ ! -L exch_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rl.F exch_3d_rl.F; fi
if [ ! -L exch_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rs.F exch_3d_rs.F; fi
if [ ! -L exch_cycle_ebl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_cycle_ebl.F exch_cycle_ebl.F; fi
if [ ! -L exch_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_init.F exch_init.F; fi
if [ ! -L exch_r4_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_x.F exch_r4_recv_get_x.F; fi
if [ ! -L exch_r4_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_y.F exch_r4_recv_get_y.F; fi
if [ ! -L exch_r4_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_x.F exch_r4_send_put_x.F; fi
if [ ! -L exch_r4_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_y.F exch_r4_send_put_y.F; fi
if [ ! -L exch_r8_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_x.F exch_r8_recv_get_x.F; fi
if [ ! -L exch_r8_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_y.F exch_r8_recv_get_y.F; fi
if [ ! -L exch_r8_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_x.F exch_r8_send_put_x.F; fi
if [ ! -L exch_r8_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_y.F exch_r8_send_put_y.F; fi
if [ ! -L exch_rl_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_x.F exch_rl_recv_get_x.F; fi
if [ ! -L exch_rl_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_y.F exch_rl_recv_get_y.F; fi
if [ ! -L exch_rl_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_x.F exch_rl_send_put_x.F; fi
if [ ! -L exch_rl_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_y.F exch_rl_send_put_y.F; fi
if [ ! -L exch_rs_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_x.F exch_rs_recv_get_x.F; fi
if [ ! -L exch_rs_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_y.F exch_rs_recv_get_y.F; fi
if [ ! -L exch_rs_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_x.F exch_rs_send_put_x.F; fi
if [ ! -L exch_rs_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_y.F exch_rs_send_put_y.F; fi
if [ ! -L exch_s3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r4.F exch_s3d_r4.F; fi
if [ ! -L exch_s3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r8.F exch_s3d_r8.F; fi
if [ ! -L exch_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rl.F exch_s3d_rl.F; fi
if [ ! -L exch_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rs.F exch_s3d_rs.F; fi
if [ ! -L exch_sm_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r4.F exch_sm_3d_r4.F; fi
if [ ! -L exch_sm_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r8.F exch_sm_3d_r8.F; fi
if [ ! -L exch_sm_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rl.F exch_sm_3d_rl.F; fi
if [ ! -L exch_sm_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rs.F exch_sm_3d_rs.F; fi
if [ ! -L exch_uv_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r4.F exch_uv_3d_r4.F; fi
if [ ! -L exch_uv_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r8.F exch_uv_3d_r8.F; fi
if [ ! -L exch_uv_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rl.F exch_uv_3d_rl.F; fi
if [ ! -L exch_uv_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rs.F exch_uv_3d_rs.F; fi
if [ ! -L exch_uv_agrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r4.F; fi
if [ ! -L exch_uv_agrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_r8.F; fi
if [ ! -L exch_uv_agrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rl.F; fi
if [ ! -L exch_uv_agrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rs.F exch_uv_agrid_3d_rs.F; fi
if [ ! -L exch_uv_bgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r4.F; fi
if [ ! -L exch_uv_bgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_r8.F; fi
if [ ! -L exch_uv_bgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rl.F; fi
if [ ! -L exch_uv_bgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rs.F exch_uv_bgrid_3d_rs.F; fi
if [ ! -L exch_uv_dgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r4.F; fi
if [ ! -L exch_uv_dgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_r8.F; fi
if [ ! -L exch_uv_dgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rl.F; fi
if [ ! -L exch_uv_dgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rs.F exch_uv_dgrid_3d_rs.F; fi
if [ ! -L exch_uv_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r4.F exch_uv_xy_r4.F; fi
if [ ! -L exch_uv_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r8.F exch_uv_xy_r8.F; fi
if [ ! -L exch_uv_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rl.F exch_uv_xy_rl.F; fi
if [ ! -L exch_uv_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rs.F exch_uv_xy_rs.F; fi
if [ ! -L exch_uv_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r4.F exch_uv_xyz_r4.F; fi
if [ ! -L exch_uv_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r8.F exch_uv_xyz_r8.F; fi
if [ ! -L exch_uv_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rl.F exch_uv_xyz_rl.F; fi
if [ ! -L exch_uv_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rs.F exch_uv_xyz_rs.F; fi
if [ ! -L exch_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r4.F exch_xy_r4.F; fi
if [ ! -L exch_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r8.F exch_xy_r8.F; fi
if [ ! -L exch_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rl.F exch_xy_rl.F; fi
if [ ! -L exch_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rs.F exch_xy_rs.F; fi
if [ ! -L exch_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r4.F exch_xyz_r4.F; fi
if [ ! -L exch_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r8.F exch_xyz_r8.F; fi
if [ ! -L exch_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rl.F exch_xyz_rl.F; fi
if [ ! -L exch_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rs.F exch_xyz_rs.F; fi
if [ ! -L exch_z_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r4.F exch_z_3d_r4.F; fi
if [ ! -L exch_z_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r8.F exch_z_3d_r8.F; fi
if [ ! -L exch_z_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rl.F exch_z_3d_rl.F; fi
if [ ! -L exch_z_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rs.F exch_z_3d_rs.F; fi
if [ ! -L fill_cs_corner_ag_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_ag_rl.F fill_cs_corner_ag_rl.F; fi
if [ ! -L fill_cs_corner_tr_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_tr_rl.F fill_cs_corner_tr_rl.F; fi
if [ ! -L fill_cs_corner_uv_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rl.F fill_cs_corner_uv_rl.F; fi
if [ ! -L fill_cs_corner_uv_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rs.F fill_cs_corner_uv_rs.F; fi
if [ ! -L fool_the_compiler.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fool_the_compiler.F fool_the_compiler.F; fi
if [ ! -L gather_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r4.F gather_2d_r4.F; fi
if [ ! -L gather_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r8.F gather_2d_r8.F; fi
if [ ! -L gather_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r4.F gather_2d_wh_r4.F; fi
if [ ! -L gather_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r8.F gather_2d_wh_r8.F; fi
if [ ! -L gather_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r4.F gather_vec_r4.F; fi
if [ ! -L gather_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r8.F gather_vec_r8.F; fi
if [ ! -L gather_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_xz.F gather_xz.F; fi
if [ ! -L gather_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_yz.F gather_yz.F; fi
if [ ! -L get_periodic_interval.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/get_periodic_interval.F get_periodic_interval.F; fi
if [ ! -L global_max.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_max.F global_max.F; fi
if [ ! -L global_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum.F global_sum.F; fi
if [ ! -L global_sum_singlecpu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_singlecpu.F global_sum_singlecpu.F; fi
if [ ! -L global_sum_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_tile.F global_sum_tile.F; fi
if [ ! -L global_vec_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_vec_sum.F global_vec_sum.F; fi
if [ ! -L gsum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsum.F gsum.F; fi
if [ ! -L ini_communication_patterns.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_communication_patterns.F ini_communication_patterns.F; fi
if [ ! -L ini_procs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_procs.F ini_procs.F; fi
if [ ! -L ini_threading_environment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_threading_environment.F ini_threading_environment.F; fi
if [ ! -L lef_zero.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/lef_zero.F lef_zero.F; fi
if [ ! -L main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/main.F main.F; fi
if [ ! -L master_cpu_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_io.F master_cpu_io.F; fi
if [ ! -L master_cpu_thread.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_thread.F master_cpu_thread.F; fi
if [ ! -L mds_byteswapi4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapi4.F mds_byteswapi4.F; fi
if [ ! -L mds_byteswapr4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr4.F mds_byteswapr4.F; fi
if [ ! -L mds_byteswapr8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr8.F mds_byteswapr8.F; fi
if [ ! -L mdsfindunit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mdsfindunit.F mdsfindunit.F; fi
if [ ! -L mds_flush.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_flush.F mds_flush.F; fi
if [ ! -L mds_reclen.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_reclen.F mds_reclen.F; fi
if [ ! -L memsync.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/memsync.F memsync.F; fi
if [ ! -L nml_change_syntax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_change_syntax.F nml_change_syntax.F; fi
if [ ! -L nml_set_terminator.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_set_terminator.F nml_set_terminator.F; fi
if [ ! -L open_copy_data_file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/open_copy_data_file.F open_copy_data_file.F; fi
if [ ! -L print.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/print.F print.F; fi
if [ ! -L reset_halo.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/reset_halo.F reset_halo.F; fi
if [ ! -L scatter_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r4.F scatter_2d_r4.F; fi
if [ ! -L scatter_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r8.F scatter_2d_r8.F; fi
if [ ! -L scatter_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r4.F scatter_2d_wh_r4.F; fi
if [ ! -L scatter_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r8.F scatter_2d_wh_r8.F; fi
if [ ! -L scatter_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r4.F scatter_vec_r4.F; fi
if [ ! -L scatter_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r8.F scatter_vec_r8.F; fi
if [ ! -L scatter_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_xz.F scatter_xz.F; fi
if [ ! -L scatter_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_yz.F scatter_yz.F; fi
if [ ! -L stop_if_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/stop_if_error.F stop_if_error.F; fi
if [ ! -L timers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timers.F timers.F; fi
if [ ! -L utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/utils.F utils.F; fi
if [ ! -L write_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/write_utils.F write_utils.F; fi
if [ ! -L adams_bashforth2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth2.F adams_bashforth2.F; fi
if [ ! -L adams_bashforth3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth3.F adams_bashforth3.F; fi
if [ ! -L add_walls2masks.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/add_walls2masks.F add_walls2masks.F; fi
if [ ! -L apply_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/apply_forcing.F apply_forcing.F; fi
if [ ! -L calc_3d_diffusivity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_3d_diffusivity.F calc_3d_diffusivity.F; fi
if [ ! -L calc_adv_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_adv_flow.F calc_adv_flow.F; fi
if [ ! -L calc_div_ghat.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_div_ghat.F calc_div_ghat.F; fi
if [ ! -L calc_eddy_stress.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_eddy_stress.F calc_eddy_stress.F; fi
if [ ! -L calc_grad_phi_fv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_fv.F calc_grad_phi_fv.F; fi
if [ ! -L calc_grad_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_hyd.F calc_grad_phi_hyd.F; fi
if [ ! -L calc_grad_phi_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_surf.F calc_grad_phi_surf.F; fi
if [ ! -L calc_grid_angles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grid_angles.F calc_grid_angles.F; fi
if [ ! -L calc_gw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_gw.F calc_gw.F; fi
if [ ! -L calc_ivdc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_ivdc.F calc_ivdc.F; fi
if [ ! -L calc_oce_mxlayer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_oce_mxlayer.F calc_oce_mxlayer.F; fi
if [ ! -L calc_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_phi_hyd.F calc_phi_hyd.F; fi
if [ ! -L calc_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_r_star.F calc_r_star.F; fi
if [ ! -L calc_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_surf_dr.F calc_surf_dr.F; fi
if [ ! -L calc_viscosity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_viscosity.F calc_viscosity.F; fi
if [ ! -L calc_wsurf_tr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_wsurf_tr.F calc_wsurf_tr.F; fi
if [ ! -L cg2d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_ex0.F cg2d_ex0.F; fi
if [ ! -L cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d.F cg2d.F; fi
if [ ! -L cg2d_nsa.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_nsa.F cg2d_nsa.F; fi
if [ ! -L cg2d_sr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_sr.F cg2d_sr.F; fi
if [ ! -L cg3d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d_ex0.F cg3d_ex0.F; fi
if [ ! -L cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d.F cg3d.F; fi
if [ ! -L check_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/check_pickup.F check_pickup.F; fi
if [ ! -L config_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_check.F config_check.F; fi
if [ ! -L config_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_summary.F config_summary.F; fi
if [ ! -L convective_adjustment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment.F convective_adjustment.F; fi
if [ ! -L convective_adjustment_ini.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment_ini.F convective_adjustment_ini.F; fi
if [ ! -L convectively_mixtracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convectively_mixtracer.F convectively_mixtracer.F; fi
if [ ! -L convective_weights.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_weights.F convective_weights.F; fi
if [ ! -L correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/correction_step.F correction_step.F; fi
if [ ! -L cycle_ab_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_ab_tracer.F cycle_ab_tracer.F; fi
if [ ! -L cycle_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_tracer.F cycle_tracer.F; fi
if [ ! -L diags_oceanic_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_oceanic_surf_flux.F diags_oceanic_surf_flux.F; fi
if [ ! -L diags_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_hyd.F diags_phi_hyd.F; fi
if [ ! -L diags_phi_rlow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_rlow.F diags_phi_rlow.F; fi
if [ ! -L diags_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_rho.F diags_rho.F; fi
if [ ! -L diags_sound_speed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_sound_speed.F diags_sound_speed.F; fi
if [ ! -L do_atmospheric_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_atmospheric_phys.F do_atmospheric_phys.F; fi
if [ ! -L do_fields_blocking_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_fields_blocking_exchanges.F do_fields_blocking_exchanges.F; fi
if [ ! -L do_stagger_fields_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_stagger_fields_exchanges.F do_stagger_fields_exchanges.F; fi
if [ ! -L do_statevars_diags.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_diags.F do_statevars_diags.F; fi
if [ ! -L do_statevars_tave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_tave.F do_statevars_tave.F; fi
if [ ! -L do_the_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_the_model_io.F do_the_model_io.F; fi
if [ ! -L do_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_write_pickup.F do_write_pickup.F; fi
if [ ! -L dynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/dynamics.F dynamics.F; fi
if [ ! -L external_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_fields_load.F external_fields_load.F; fi
if [ ! -L external_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing.F external_forcing.F; fi
if [ ! -L external_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing_surf.F external_forcing_surf.F; fi
if [ ! -L find_alpha.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_alpha.F find_alpha.F; fi
if [ ! -L find_hyd_press_1d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_hyd_press_1d.F find_hyd_press_1d.F; fi
if [ ! -L find_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_rho.F find_rho.F; fi
if [ ! -L forcing_surf_relax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forcing_surf_relax.F forcing_surf_relax.F; fi
if [ ! -L forward_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forward_step.F forward_step.F; fi
if [ ! -L freesurf_rescale_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freesurf_rescale_g.F freesurf_rescale_g.F; fi
if [ ! -L freeze_surface.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freeze_surface.F freeze_surface.F; fi
if [ ! -L grad_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/grad_sigma.F grad_sigma.F; fi
if [ ! -L gsw_teos10.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/gsw_teos10.F gsw_teos10.F; fi
if [ ! -L impldiff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/impldiff.F impldiff.F; fi
if [ ! -L ini_cartesian_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cartesian_grid.F ini_cartesian_grid.F; fi
if [ ! -L ini_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg2d.F ini_cg2d.F; fi
if [ ! -L ini_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg3d.F ini_cg3d.F; fi
if [ ! -L ini_cori.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cori.F ini_cori.F; fi
if [ ! -L ini_curvilinear_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_curvilinear_grid.F ini_curvilinear_grid.F; fi
if [ ! -L ini_cylinder_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cylinder_grid.F ini_cylinder_grid.F; fi
if [ ! -L ini_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_depths.F ini_depths.F; fi
if [ ! -L ini_dynvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_dynvars.F ini_dynvars.F; fi
if [ ! -L ini_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_eos.F ini_eos.F; fi
if [ ! -L ini_ffields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_ffields.F ini_ffields.F; fi
if [ ! -L ini_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_fields.F ini_fields.F; fi
if [ ! -L ini_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_forcing.F ini_forcing.F; fi
if [ ! -L ini_global_domain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_global_domain.F ini_global_domain.F; fi
if [ ! -L ini_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_grid.F ini_grid.F; fi
if [ ! -L ini_linear_phisurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_linear_phisurf.F ini_linear_phisurf.F; fi
if [ ! -L ini_local_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_local_grid.F ini_local_grid.F; fi
if [ ! -L ini_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_masks_etc.F ini_masks_etc.F; fi
if [ ! -L ini_mixing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mixing.F ini_mixing.F; fi
if [ ! -L ini_mnc_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mnc_vars.F ini_mnc_vars.F; fi
if [ ! -L ini_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_model_io.F ini_model_io.F; fi
if [ ! -L ini_nh_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_fields.F ini_nh_fields.F; fi
if [ ! -L ini_nh_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_vars.F ini_nh_vars.F; fi
if [ ! -L ini_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nlfs_vars.F ini_nlfs_vars.F; fi
if [ ! -L ini_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_parms.F ini_parms.F; fi
if [ ! -L ini_p_ground.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_p_ground.F ini_p_ground.F; fi
if [ ! -L ini_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_pressure.F ini_pressure.F; fi
if [ ! -L ini_psurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_psurf.F ini_psurf.F; fi
if [ ! -L ini_salt.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_salt.F ini_salt.F; fi
if [ ! -L ini_sigma_hfac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_sigma_hfac.F ini_sigma_hfac.F; fi
if [ ! -L ini_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_spherical_polar_grid.F ini_spherical_polar_grid.F; fi
if [ ! -L ini_theta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_theta.F ini_theta.F; fi
if [ ! -L initialise_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_fixed.F initialise_fixed.F; fi
if [ ! -L initialise_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_varia.F initialise_varia.F; fi
if [ ! -L ini_vel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vel.F ini_vel.F; fi
if [ ! -L ini_vertical_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vertical_grid.F ini_vertical_grid.F; fi
if [ ! -L integrate_for_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integrate_for_w.F integrate_for_w.F; fi
if [ ! -L integr_continuity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integr_continuity.F integr_continuity.F; fi
if [ ! -L load_fields_driver.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_fields_driver.F load_fields_driver.F; fi
if [ ! -L load_grid_spacing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_grid_spacing.F load_grid_spacing.F; fi
if [ ! -L load_ref_files.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_ref_files.F load_ref_files.F; fi
if [ ! -L main_do_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/main_do_loop.F main_do_loop.F; fi
if [ ! -L momentum_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/momentum_correction_step.F momentum_correction_step.F; fi
if [ ! -L packages_boot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_boot.F packages_boot.F; fi
if [ ! -L packages_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_check.F packages_check.F; fi
if [ ! -L packages_error_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_error_msg.F packages_error_msg.F; fi
if [ ! -L packages_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_fixed.F packages_init_fixed.F; fi
if [ ! -L packages_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_variables.F packages_init_variables.F; fi
if [ ! -L packages_print_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_print_msg.F packages_print_msg.F; fi
if [ ! -L packages_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_readparms.F packages_readparms.F; fi
if [ ! -L packages_unused_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_unused_msg.F packages_unused_msg.F; fi
if [ ! -L packages_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_write_pickup.F packages_write_pickup.F; fi
if [ ! -L plot_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/plot_field.F plot_field.F; fi
if [ ! -L port_rand.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/port_rand.F port_rand.F; fi
if [ ! -L post_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/post_cg3d.F post_cg3d.F; fi
if [ ! -L pre_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pre_cg3d.F pre_cg3d.F; fi
if [ ! -L pressure_for_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pressure_for_eos.F pressure_for_eos.F; fi
if [ ! -L read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/read_pickup.F read_pickup.F; fi
if [ ! -L remove_mean.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/remove_mean.F remove_mean.F; fi
if [ ! -L reset_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/reset_nlfs_vars.F reset_nlfs_vars.F; fi
if [ ! -L rotate_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_spherical_polar_grid.F rotate_spherical_polar_grid.F; fi
if [ ! -L rotate_uv2en.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_uv2en.F rotate_uv2en.F; fi
if [ ! -L salt_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/salt_integrate.F salt_integrate.F; fi
if [ ! -L seawater.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/seawater.F seawater.F; fi
if [ ! -L set_defaults.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_defaults.F set_defaults.F; fi
if [ ! -L set_grid_factors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_grid_factors.F set_grid_factors.F; fi
if [ ! -L set_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_parms.F set_parms.F; fi
if [ ! -L set_ref_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_ref_state.F set_ref_state.F; fi
if [ ! -L solve_for_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_for_pressure.F solve_for_pressure.F; fi
if [ ! -L solve_pentadiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_pentadiagonal.F solve_pentadiagonal.F; fi
if [ ! -L solve_tridiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_tridiagonal.F solve_tridiagonal.F; fi
if [ ! -L solve_uv_tridiago.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_uv_tridiago.F solve_uv_tridiago.F; fi
if [ ! -L state_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/state_summary.F state_summary.F; fi
if [ ! -L swfrac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/swfrac.F swfrac.F; fi
if [ ! -L taueddy_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_init_varia.F taueddy_init_varia.F; fi
if [ ! -L taueddy_tendency_apply.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_tendency_apply.F taueddy_tendency_apply.F; fi
if [ ! -L temp_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/temp_integrate.F temp_integrate.F; fi
if [ ! -L the_main_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_main_loop.F the_main_loop.F; fi
if [ ! -L the_model_main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_model_main.F the_model_main.F; fi
if [ ! -L thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/thermodynamics.F thermodynamics.F; fi
if [ ! -L timestep.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep.F timestep.F; fi
if [ ! -L timestep_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_tracer.F timestep_tracer.F; fi
if [ ! -L timestep_wvel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_wvel.F timestep_wvel.F; fi
if [ ! -L tracers_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_correction_step.F tracers_correction_step.F; fi
if [ ! -L tracers_iigw_correction.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_iigw_correction.F tracers_iigw_correction.F; fi
if [ ! -L turnoff_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/turnoff_model_io.F turnoff_model_io.F; fi
if [ ! -L update_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_cg2d.F update_cg2d.F; fi
if [ ! -L update_etah.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etah.F update_etah.F; fi
if [ ! -L update_etaws.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etaws.F update_etaws.F; fi
if [ ! -L update_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_masks_etc.F update_masks_etc.F; fi
if [ ! -L update_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_r_star.F update_r_star.F; fi
if [ ! -L update_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_sigma.F update_sigma.F; fi
if [ ! -L update_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_surf_dr.F update_surf_dr.F; fi
if [ ! -L write_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_grid.F write_grid.F; fi
if [ ! -L write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_pickup.F write_pickup.F; fi
if [ ! -L write_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_state.F write_state.F; fi
if [ ! -L gsl_ieee_env.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsl_ieee_env.c gsl_ieee_env.c; fi
if [ ! -L ptwrapper.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ptwrapper.c ptwrapper.c; fi
if [ ! -L setdir.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setdir.c setdir.c; fi
if [ ! -L setrlstk.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setrlstk.c setrlstk.c; fi
if [ ! -L sigreg.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/sigreg.c sigreg.c; fi
if [ ! -L tim.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/tim.c tim.c; fi
if [ ! -L timer_stats.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timer_stats.c timer_stats.c; fi
if [ ! -L CPP_EEOPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h CPP_EEOPTIONS.h; fi
if [ ! -L SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/SIZE.h SIZE.h; fi
if [ ! -L DEBUG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/DEBUG_OPTIONS.h DEBUG_OPTIONS.h; fi
if [ ! -L DIAGNOSTICS_CALC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_CALC.h DIAGNOSTICS_CALC.h; fi
if [ ! -L DIAGNOSTICS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS.h DIAGNOSTICS.h; fi
if [ ! -L DIAGNOSTICS_SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_SIZE.h DIAGNOSTICS_SIZE.h; fi
if [ ! -L DIAG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAG_OPTIONS.h DIAG_OPTIONS.h; fi
if [ ! -L DIAGSTATS_REGIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGSTATS_REGIONS.h DIAGSTATS_REGIONS.h; fi
if [ ! -L gad_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev1_dir.h gad_ad_check_lev1_dir.h; fi
if [ ! -L gad_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev2_dir.h gad_ad_check_lev2_dir.h; fi
if [ ! -L gad_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev3_dir.h gad_ad_check_lev3_dir.h; fi
if [ ! -L gad_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev4_dir.h gad_ad_check_lev4_dir.h; fi
if [ ! -L GAD_FLUX_LIMITER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_FLUX_LIMITER.h GAD_FLUX_LIMITER.h; fi
if [ ! -L GAD.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD.h GAD.h; fi
if [ ! -L GAD_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_OPTIONS.h GAD_OPTIONS.h; fi
if [ ! -L GAD_SOM_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_SOM_VARS.h GAD_SOM_VARS.h; fi
if [ ! -L MDSIO_BUFF_3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_3D.h MDSIO_BUFF_3D.h; fi
if [ ! -L MDSIO_BUFF_WH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_WH.h MDSIO_BUFF_WH.h; fi
if [ ! -L MDSIO_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_OPTIONS.h MDSIO_OPTIONS.h; fi
if [ ! -L MOM_COMMON_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_COMMON_OPTIONS.h MOM_COMMON_OPTIONS.h; fi
if [ ! -L MOM_VISC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_VISC.h MOM_VISC.h; fi
if [ ! -L MOM_FLUXFORM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM.h MOM_FLUXFORM.h; fi
if [ ! -L MOM_FLUXFORM_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MOM_FLUXFORM_OPTIONS.h; fi
if [ ! -L MOM_VECINV_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MOM_VECINV_OPTIONS.h; fi
if [ ! -L MONITOR.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR.h MONITOR.h; fi
if [ ! -L MONITOR_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR_OPTIONS.h MONITOR_OPTIONS.h; fi
if [ ! -L obcs_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev1_dir.h obcs_ad_check_lev1_dir.h; fi
if [ ! -L obcs_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev2_dir.h obcs_ad_check_lev2_dir.h; fi
if [ ! -L obcs_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev3_dir.h obcs_ad_check_lev3_dir.h; fi
if [ ! -L obcs_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev4_dir.h obcs_ad_check_lev4_dir.h; fi
if [ ! -L OBCS_FIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_FIELDS.h OBCS_FIELDS.h; fi
if [ ! -L OBCS_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_GRID.h OBCS_GRID.h; fi
if [ ! -L OBCS_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_OPTIONS.h OBCS_OPTIONS.h; fi
if [ ! -L OBCS_PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PARAMS.h OBCS_PARAMS.h; fi
if [ ! -L OBCS_PTRACERS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PTRACERS.h OBCS_PTRACERS.h; fi
if [ ! -L OBCS_SEAICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_SEAICE.h OBCS_SEAICE.h; fi
if [ ! -L ORLANSKI.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/ORLANSKI.h ORLANSKI.h; fi
if [ ! -L RW_MFLDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_MFLDS.h RW_MFLDS.h; fi
if [ ! -L RW_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_OPTIONS.h RW_OPTIONS.h; fi
if [ ! -L shelfice_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev1_dir.h shelfice_ad_check_lev1_dir.h; fi
if [ ! -L shelfice_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev2_dir.h shelfice_ad_check_lev2_dir.h; fi
if [ ! -L shelfice_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev3_dir.h shelfice_ad_check_lev3_dir.h; fi
if [ ! -L shelfice_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev4_dir.h shelfice_ad_check_lev4_dir.h; fi
if [ ! -L SHELFICE_COST.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_COST.h SHELFICE_COST.h; fi
if [ ! -L SHELFICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE.h SHELFICE.h; fi
if [ ! -L SHELFICE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_OPTIONS.h SHELFICE_OPTIONS.h; fi
if [ ! -L SHELFICE_TAVE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_TAVE.h SHELFICE_TAVE.h; fi
if [ ! -L TIMEAVE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_OPTIONS.h TIMEAVE_OPTIONS.h; fi
if [ ! -L TIMEAVE_STATV.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_STATV.h TIMEAVE_STATV.h; fi
if [ ! -L cmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_c.h cmumps_c.h; fi
if [ ! -L cmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_root.h cmumps_root.h; fi
if [ ! -L cmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_struc.h cmumps_struc.h; fi
if [ ! -L dmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_c.h dmumps_c.h; fi
if [ ! -L dmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_root.h dmumps_root.h; fi
if [ ! -L dmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_struc.h dmumps_struc.h; fi
if [ ! -L gklib_defs.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_defs.h gklib_defs.h; fi
if [ ! -L gklib_rename.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_rename.h gklib_rename.h; fi
if [ ! -L gklib_tls.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_tls.h gklib_tls.h; fi
if [ ! -L metis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/metis.h metis.h; fi
if [ ! -L mpicxx.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpicxx.h mpicxx.h; fi
if [ ! -L mpif.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpif.h mpif.h; fi
if [ ! -L mpi.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi.h mpi.h; fi
if [ ! -L mpiof.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpiof.h mpiof.h; fi
if [ ! -L mpio.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpio.h mpio.h; fi
if [ ! -L mpi_proto.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi_proto.h mpi_proto.h; fi
if [ ! -L mumps_compat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_compat.h mumps_compat.h; fi
if [ ! -L mumps_c_types.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_c_types.h mumps_c_types.h; fi
if [ ! -L mumps_int_def.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_int_def.h mumps_int_def.h; fi
if [ ! -L parmetis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/parmetis.h parmetis.h; fi
if [ ! -L petscao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscao.h petscao.h; fi
if [ ! -L petscbag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbag.h petscbag.h; fi
if [ ! -L petscblaslapack.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack.h petscblaslapack.h; fi
if [ ! -L petscblaslapack_mangle.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack_mangle.h petscblaslapack_mangle.h; fi
if [ ! -L petscbt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbt.h petscbt.h; fi
if [ ! -L petsccharacteristic.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccharacteristic.h petsccharacteristic.h; fi
if [ ! -L petscconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf.h petscconf.h; fi
if [ ! -L petscconfiginfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconfiginfo.h petscconfiginfo.h; fi
if [ ! -L petscconf_poison.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf_poison.h petscconf_poison.h; fi
if [ ! -L petscconvest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconvest.h petscconvest.h; fi
if [ ! -L petscctable.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscctable.h petscctable.h; fi
if [ ! -L petsccxxcomplexfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccxxcomplexfix.h petsccxxcomplexfix.h; fi
if [ ! -L petscdevice_cuda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cuda.h petscdevice_cuda.h; fi
if [ ! -L petscdevice_cupm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cupm.h petscdevice_cupm.h; fi
if [ ! -L petscdevice.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice.h petscdevice.h; fi
if [ ! -L petscdevice_hip.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_hip.h petscdevice_hip.h; fi
if [ ! -L petscdevicetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevicetypes.h petscdevicetypes.h; fi
if [ ! -L petscdmadaptor.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptor.h petscdmadaptor.h; fi
if [ ! -L petscdmceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmceed.h petscdmceed.h; fi
if [ ! -L petscdmcomposite.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmcomposite.h petscdmcomposite.h; fi
if [ ! -L petscdmda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmda.h petscdmda.h; fi
if [ ! -L petscdmdatypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmdatypes.h petscdmdatypes.h; fi
if [ ! -L petscdmfield.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmfield.h petscdmfield.h; fi
if [ ! -L petscdmforest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmforest.h petscdmforest.h; fi
if [ ! -L petscdm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdm.h petscdm.h; fi
if [ ! -L petscdmlabelephemeral.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabelephemeral.h petscdmlabelephemeral.h; fi
if [ ! -L petscdmlabel.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabel.h petscdmlabel.h; fi
if [ ! -L petscdmmoab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmmoab.h petscdmmoab.h; fi
if [ ! -L petscdmnetwork.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmnetwork.h petscdmnetwork.h; fi
if [ ! -L petscdmpatch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmpatch.h petscdmpatch.h; fi
if [ ! -L petscdmplexceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexceed.h petscdmplexceed.h; fi
if [ ! -L petscdmplex.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplex.h petscdmplex.h; fi
if [ ! -L petscdmplextransform.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransform.h petscdmplextransform.h; fi
if [ ! -L petscdmplextransformtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransformtypes.h petscdmplextransformtypes.h; fi
if [ ! -L petscdmplextypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextypes.h petscdmplextypes.h; fi
if [ ! -L petscdmproduct.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmproduct.h petscdmproduct.h; fi
if [ ! -L petscdmredundant.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmredundant.h petscdmredundant.h; fi
if [ ! -L petscdmshell.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmshell.h petscdmshell.h; fi
if [ ! -L petscdmsliced.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmsliced.h petscdmsliced.h; fi
if [ ! -L petscdmstag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmstag.h petscdmstag.h; fi
if [ ! -L petscdmswarm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmswarm.h petscdmswarm.h; fi
if [ ! -L petscdmtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmtypes.h petscdmtypes.h; fi
if [ ! -L petscdraw.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdraw.h petscdraw.h; fi
if [ ! -L petscdrawtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdrawtypes.h petscdrawtypes.h; fi
if [ ! -L petscds.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscds.h petscds.h; fi
if [ ! -L petscdstypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdstypes.h petscdstypes.h; fi
if [ ! -L petscdt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdt.h petscdt.h; fi
if [ ! -L petscdualspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdualspace.h petscdualspace.h; fi
if [ ! -L petscerror.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscerror.h petscerror.h; fi
if [ ! -L petscfeceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfeceed.h petscfeceed.h; fi
if [ ! -L petscfe.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfe.h petscfe.h; fi
if [ ! -L petscfetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfetypes.h petscfetypes.h; fi
if [ ! -L petscfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfix.h petscfix.h; fi
if [ ! -L petscfvceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvceed.h petscfvceed.h; fi
if [ ! -L petscfv.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfv.h petscfv.h; fi
if [ ! -L petscfvtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvtypes.h petscfvtypes.h; fi
if [ ! -L petsc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsc.h petsc.h; fi
if [ ! -L petscis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscis.h petscis.h; fi
if [ ! -L petscistypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscistypes.h petscistypes.h; fi
if [ ! -L petscksp.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscksp.h petscksp.h; fi
if [ ! -L petsclandau.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclandau.h petsclandau.h; fi
if [ ! -L petsclayouthdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclayouthdf5.h petsclayouthdf5.h; fi
if [ ! -L petsclogdeprecated.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogdeprecated.h petsclogdeprecated.h; fi
if [ ! -L petsclog.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclog.h petsclog.h; fi
if [ ! -L petsclogtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogtypes.h petsclogtypes.h; fi
if [ ! -L petscmachineinfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmachineinfo.h petscmachineinfo.h; fi
if [ ! -L petscmacros.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmacros.h petscmacros.h; fi
if [ ! -L petscmatcoarsen.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatcoarsen.h petscmatcoarsen.h; fi
if [ ! -L petscmatelemental.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatelemental.h petscmatelemental.h; fi
if [ ! -L petscmat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmat.h petscmat.h; fi
if [ ! -L petscmath.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmath.h petscmath.h; fi
if [ ! -L petscmathtool.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathtool.h petscmathtool.h; fi
if [ ! -L petscmathypre.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathypre.h petscmathypre.h; fi
if [ ! -L petscmatlab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatlab.h petscmatlab.h; fi
if [ ! -L petscoptions.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscoptions.h petscoptions.h; fi
if [ ! -L petscpartitioner.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpartitioner.h petscpartitioner.h; fi
if [ ! -L petscpc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpc.h petscpc.h; fi
if [ ! -L petscpctypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpctypes.h petscpctypes.h; fi
if [ ! -L petscpf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpf.h petscpf.h; fi
if [ ! -L petscpkg_version.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpkg_version.h petscpkg_version.h; fi
if [ ! -L petscsection.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsection.h petscsection.h; fi
if [ ! -L petscsectiontypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsectiontypes.h petscsectiontypes.h; fi
if [ ! -L petscsf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsf.h petscsf.h; fi
if [ ! -L petscsftypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsftypes.h petscsftypes.h; fi
if [ ! -L petscsnes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnes.h petscsnes.h; fi
if [ ! -L petscspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscspace.h petscspace.h; fi
if [ ! -L petscstring.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscstring.h petscstring.h; fi
if [ ! -L petscsys.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsys.h petscsys.h; fi
if [ ! -L petscsystypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsystypes.h petscsystypes.h; fi
if [ ! -L petsctao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao.h petsctao.h; fi
if [ ! -L petsctaolinesearch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctaolinesearch.h petsctaolinesearch.h; fi
if [ ! -L petsctime.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctime.h petsctime.h; fi
if [ ! -L petscts.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscts.h petscts.h; fi
if [ ! -L petscvec.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscvec.h petscvec.h; fi
if [ ! -L petscversion.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscversion.h petscversion.h; fi
if [ ! -L petscviennacl.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviennacl.h petscviennacl.h; fi
if [ ! -L petscviewerexodusii.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerexodusii.h petscviewerexodusii.h; fi
if [ ! -L petscviewer.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewer.h petscviewer.h; fi
if [ ! -L petscviewerhdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerhdf5.h petscviewerhdf5.h; fi
if [ ! -L petscviewersaws.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewersaws.h petscviewersaws.h; fi
if [ ! -L petscviewertypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewertypes.h petscviewertypes.h; fi
if [ ! -L petscwebclient.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscwebclient.h petscwebclient.h; fi
if [ ! -L smumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_c.h smumps_c.h; fi
if [ ! -L smumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_root.h smumps_root.h; fi
if [ ! -L smumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_struc.h smumps_struc.h; fi
if [ ! -L zconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zconf.h zconf.h; fi
if [ ! -L zlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zlib.h zlib.h; fi
if [ ! -L zmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_c.h zmumps_c.h; fi
if [ ! -L zmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_root.h zmumps_root.h; fi
if [ ! -L zmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_struc.h zmumps_struc.h; fi
if [ ! -L BAR2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BAR2.h BAR2.h; fi
if [ ! -L BARRIER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BARRIER.h BARRIER.h; fi
if [ ! -L CPP_EEMACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CPP_EEMACROS.h CPP_EEMACROS.h; fi
if [ ! -L CUMULSUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CUMULSUM.h CUMULSUM.h; fi
if [ ! -L DEF_IN_MAKEFILE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/DEF_IN_MAKEFILE.h DEF_IN_MAKEFILE.h; fi
if [ ! -L EEBUFF_SCPU.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEBUFF_SCPU.h EEBUFF_SCPU.h; fi
if [ ! -L EEPARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEPARAMS.h EEPARAMS.h; fi
if [ ! -L EESUPPORT.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EESUPPORT.h EESUPPORT.h; fi
if [ ! -L EXCH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EXCH.h EXCH.h; fi
if [ ! -L GLOBAL_MAX.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_MAX.h GLOBAL_MAX.h; fi
if [ ! -L GLOBAL_SUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_SUM.h GLOBAL_SUM.h; fi
if [ ! -L MAIN_PDIRECTIVES1.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES1.h MAIN_PDIRECTIVES1.h; fi
if [ ! -L MAIN_PDIRECTIVES2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES2.h MAIN_PDIRECTIVES2.h; fi
if [ ! -L MPI_INFO.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MPI_INFO.h MPI_INFO.h; fi
if [ ! -L SIGREG.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/SIGREG.h SIGREG.h; fi
if [ ! -L CG2D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG2D.h CG2D.h; fi
if [ ! -L CG3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG3D.h CG3D.h; fi
if [ ! -L CPP_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h CPP_OPTIONS.h; fi
if [ ! -L DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXC_MACROS.h DXC_MACROS.h; fi
if [ ! -L DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXF_MACROS.h DXF_MACROS.h; fi
if [ ! -L DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXG_MACROS.h DXG_MACROS.h; fi
if [ ! -L DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXV_MACROS.h DXV_MACROS.h; fi
if [ ! -L DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYC_MACROS.h DYC_MACROS.h; fi
if [ ! -L DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYF_MACROS.h DYF_MACROS.h; fi
if [ ! -L DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYG_MACROS.h DYG_MACROS.h; fi
if [ ! -L DYNVARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYNVARS.h DYNVARS.h; fi
if [ ! -L DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYU_MACROS.h DYU_MACROS.h; fi
if [ ! -L EOS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/EOS.h EOS.h; fi
if [ ! -L FCORI_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FCORI_MACROS.h FCORI_MACROS.h; fi
if [ ! -L FFIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FFIELDS.h FFIELDS.h; fi
if [ ! -L GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID.h GRID.h; fi
if [ ! -L GRID_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID_MACROS.h GRID_MACROS.h; fi
if [ ! -L HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACC_MACROS.h HFACC_MACROS.h; fi
if [ ! -L HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACS_MACROS.h HFACS_MACROS.h; fi
if [ ! -L HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACW_MACROS.h HFACW_MACROS.h; fi
if [ ! -L MASKS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKS_MACROS.h MASKS_MACROS.h; fi
if [ ! -L MASKW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKW_MACROS.h MASKW_MACROS.h; fi
if [ ! -L NH_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/NH_VARS.h NH_VARS.h; fi
if [ ! -L PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/PARAMS.h PARAMS.h; fi
if [ ! -L RA_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RA_MACROS.h RA_MACROS.h; fi
if [ ! -L RAS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAS_MACROS.h RAS_MACROS.h; fi
if [ ! -L RAW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAW_MACROS.h RAW_MACROS.h; fi
if [ ! -L RECIP_DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXC_MACROS.h RECIP_DXC_MACROS.h; fi
if [ ! -L RECIP_DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXF_MACROS.h RECIP_DXF_MACROS.h; fi
if [ ! -L RECIP_DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXG_MACROS.h RECIP_DXG_MACROS.h; fi
if [ ! -L RECIP_DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXV_MACROS.h RECIP_DXV_MACROS.h; fi
if [ ! -L RECIP_DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYC_MACROS.h RECIP_DYC_MACROS.h; fi
if [ ! -L RECIP_DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYF_MACROS.h RECIP_DYF_MACROS.h; fi
if [ ! -L RECIP_DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYG_MACROS.h RECIP_DYG_MACROS.h; fi
if [ ! -L RECIP_DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYU_MACROS.h RECIP_DYU_MACROS.h; fi
if [ ! -L RECIP_HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACC_MACROS.h RECIP_HFACC_MACROS.h; fi
if [ ! -L RECIP_HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACS_MACROS.h RECIP_HFACS_MACROS.h; fi
if [ ! -L RECIP_HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACW_MACROS.h RECIP_HFACW_MACROS.h; fi
if [ ! -L RESTART.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RESTART.h RESTART.h; fi
if [ ! -L SET_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SET_GRID.h SET_GRID.h; fi
if [ ! -L SOLVE_FOR_PRESSURE3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE3D.h SOLVE_FOR_PRESSURE3D.h; fi
if [ ! -L SOLVE_FOR_PRESSURE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE.h SOLVE_FOR_PRESSURE.h; fi
if [ ! -L SURFACE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SURFACE.h SURFACE.h; fi
if [ ! -L TANPHIATU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATU_MACROS.h TANPHIATU_MACROS.h; fi
if [ ! -L TANPHIATV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATV_MACROS.h TANPHIATV_MACROS.h; fi
if [ ! -L THE_MODEL_COMMON_BLOCKS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/THE_MODEL_COMMON_BLOCKS.h THE_MODEL_COMMON_BLOCKS.h; fi
if [ ! -L XC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/XC_MACROS.h XC_MACROS.h; fi
if [ ! -L YC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/YC_MACROS.h YC_MACROS.h; fi
Creating FC_NAMEMANGLE.h ...
echo "#define FC_NAMEMANGLE(X)  X ## _" > FC_NAMEMANGLE.h
Creating BUILD_INFO.h ...
echo "#define THISVER 'checkpoint68i'" > BUILD_INFO.h
echo "#define THISUSER 'jenkins'" >> BUILD_INFO.h
echo "#define THISDATE 'Mon Jul 29 03:46:08 AM PDT 2024'" >> BUILD_INFO.h
echo "#define THISHOST 'Debian-12-VM'" >> BUILD_INFO.h
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build'
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/xmakedepend -f Makefile -o .f -DWORDLENGTH=4 -DNML_TERMINATOR -DALLOW_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_ETIME_SBR -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -DHAVE_FLUSH  -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu -I/usr/include cpl_issm.F do_oceanic_phys.F eeboot_minimal.F eedie.F chksum_tiled.F debug_call.F debug_cs_corner_uv.F debug_enter.F debug_fld_stats_rl.F debug_fld_stats_rs.F debug_leave.F debug_msg.F debug_stats_rl.F debug_stats_rs.F fill_in_corners_rl.F write_fullarray_rl.F write_fullarray_rs.F diag_calc_psivel.F diag_cg2d.F diagnostics_addtolist.F diagnostics_calc_phivel.F diagnostics_check.F diagnostics_clear.F diagnostics_fill.F diagnostics_fill_field.F diagnostics_fill_rs.F diagnostics_fill_state.F diagnostics_fract_fill.F diagnostics_ini_io.F diagnostics_init_early.F diagnostics_init_fixed.F diagnostics_init_varia.F diagnostics_interp_p2p.F diagnostics_interp_vert.F diagnostics_is_on.F diagnostics_list_check.F diagnostics_main_init.F diagnostics_mnc_out.F diagnostics_out.F diagnostics_readparms.F diagnostics_read_pickup.F diagnostics_scale_fill.F diagnostics_scale_fill_rs.F diagnostics_set_calc.F diagnostics_setdiag.F diagnostics_set_levels.F diagnostics_set_pointers.F diagnostics_status_error.F diagnostics_sum_levels.F diagnostics_summary.F diagnostics_switch_onoff.F diagnostics_utils.F diagnostics_write_adj.F diagnostics_write.F diagnostics_write_pickup.F diagstats_ascii_out.F diagstats_calc.F diagstats_clear.F diagstats_close_io.F diagstats_fill.F diagstats_global.F diagstats_ini_io.F diagstats_local.F diagstats_mnc_out.F diagstats_others_calc.F diagstats_output.F diagstats_setdiag.F diagstats_set_pointers.F diagstats_set_regions.F diag_vegtile_fill.F gad_advection.F gad_advscheme.F gad_biharm_r.F gad_biharm_x.F gad_biharm_y.F gad_c2_adv_r.F gad_c2_adv_x.F gad_c2_adv_y.F gad_c2_impl_r.F gad_c4_adv_r.F gad_c4_adv_x.F gad_c4_adv_y.F gad_calc_rhs.F gad_check.F gad_del2.F gad_diagnostics_init.F gad_diagnostics_state.F gad_diff_r.F gad_diff_x.F gad_diff_y.F gad_dst2u1_adv_r.F gad_dst2u1_adv_x.F gad_dst2u1_adv_y.F gad_dst2u1_impl_r.F gad_dst3_adv_r.F gad_dst3_adv_x.F gad_dst3_adv_y.F gad_dst3fl_adv_r.F gad_dst3fl_adv_x.F gad_dst3fl_adv_y.F gad_dst3fl_impl_r.F gad_exch_som.F gad_fluxlimit_adv_r.F gad_fluxlimit_adv_x.F gad_fluxlimit_adv_y.F gad_fluxlimit_impl_r.F gad_grad_x.F gad_grad_y.F gad_implicit_r.F gad_init_fixed.F gad_init_varia.F gad_os7mp_adv_r.F gad_os7mp_adv_x.F gad_os7mp_adv_y.F gad_osc_hat_r.F gad_osc_hat_x.F gad_osc_hat_y.F gad_osc_mul_r.F gad_osc_mul_x.F gad_osc_mul_y.F gad_plm_fun.F gad_ppm_adv_r.F gad_ppm_adv_x.F gad_ppm_adv_y.F gad_ppm_flx_r.F gad_ppm_flx_x.F gad_ppm_flx_y.F gad_ppm_fun.F gad_ppm_hat_r.F gad_ppm_hat_x.F gad_ppm_hat_y.F gad_ppm_p3e_r.F gad_ppm_p3e_x.F gad_ppm_p3e_y.F gad_pqm_adv_r.F gad_pqm_adv_x.F gad_pqm_adv_y.F gad_pqm_flx_r.F gad_pqm_flx_x.F gad_pqm_flx_y.F gad_pqm_fun.F gad_pqm_hat_r.F gad_pqm_hat_x.F gad_pqm_hat_y.F gad_pqm_p5e_r.F gad_pqm_p5e_x.F gad_pqm_p5e_y.F gad_read_pickup.F gad_som_advect.F gad_som_adv_r.F gad_som_adv_x.F gad_som_adv_y.F gad_som_exchanges.F gad_som_fill_cs_corner.F gad_som_lim_r.F gad_som_prep_cs_corner.F gad_u3_adv_r.F gad_u3_adv_x.F gad_u3_adv_y.F gad_u3c4_impl_r.F gad_write_pickup.F salt_fill.F mdsio_buffertorl.F mdsio_buffertors.F mdsio_check4file.F mdsio_facef_read.F mdsio_gl.F mdsio_gl_slice.F mdsio_pass_r4torl.F mdsio_pass_r4tors.F mdsio_pass_r8torl.F mdsio_pass_r8tors.F mdsio_rd_rec_rl.F mdsio_rd_rec_rs.F mdsio_read_field.F mdsio_read_meta.F mdsio_read_section.F mdsio_read_tape.F mdsio_readvec_loc.F mdsio_read_whalos.F mdsio_rw_field.F mdsio_rw_slice.F mdsio_seg4torl.F mdsio_seg4tors.F mdsio_seg8torl.F mdsio_seg8tors.F mdsio_segxtorx_2d.F mdsio_write_field.F mdsio_writelocal.F mdsio_write_meta.F mdsio_write_section.F mdsio_write_tape.F mdsio_writevec_loc.F mdsio_write_whalos.F mdsio_wr_metafiles.F mdsio_wr_rec_rl.F mdsio_wr_rec_rs.F mom_calc_3d_strain.F mom_calc_absvort3.F mom_calc_hdiv.F mom_calc_hfacz.F mom_calc_ke.F mom_calc_relvort3.F mom_calc_smag_3d.F mom_calc_strain.F mom_calc_tension.F mom_calc_visc.F mom_diagnostics_init.F mom_hdissip.F mom_init_fixed.F mom_quasihydrostatic.F mom_u_botdrag_coeff.F mom_u_coriolis_nh.F mom_u_implicit_r.F mom_u_metric_nh.F mom_u_rviscflux.F mom_u_sidedrag.F mom_uv_smag_3d.F mom_v_botdrag_coeff.F mom_v_coriolis_nh.F mom_v_implicit_r.F mom_visc_qgl_limit.F mom_visc_qgl_stretch.F mom_v_metric_nh.F mom_v_rviscflux.F mom_v_sidedrag.F mom_w_coriolis_nh.F mom_w_metric_nh.F mom_w_sidedrag.F mom_w_smag_3d.F mom_calc_rtrans.F mom_fluxform.F mom_u_adv_uu.F mom_u_adv_vu.F mom_u_adv_wu.F mom_u_coriolis.F mom_u_del2u.F mom_u_metric_cylinder.F mom_u_metric_sphere.F mom_uv_boundary.F mom_u_xviscflux.F mom_u_yviscflux.F mom_v_adv_uv.F mom_v_adv_vv.F mom_v_adv_wv.F mom_v_coriolis.F mom_v_del2v.F mom_v_metric_cylinder.F mom_v_metric_sphere.F mom_v_xviscflux.F mom_v_yviscflux.F mom_vecinv.F mom_vi_coriolis.F mom_vi_del2uv.F mom_vi_hdissip.F mom_vi_u_coriolis_c4.F mom_vi_u_coriolis.F mom_vi_u_grad_ke.F mom_vi_u_vertshear.F mom_vi_v_coriolis_c4.F mom_vi_v_coriolis.F mom_vi_v_grad_ke.F mom_vi_v_vertshear.F mon_advcfl.F mon_advcflw2.F mon_advcflw.F mon_calc_advcfl.F mon_calc_stats_rl.F mon_calc_stats_rs.F mon_init.F monitor_ad.F monitor.F monitor_g.F mon_ke.F mon_out.F mon_printstats_rl.F mon_printstats_rs.F mon_set_iounit.F mon_set_pref.F mon_solution.F mon_stats_latbnd_rl.F mon_stats_rl.F mon_stats_rs.F mon_surfcor.F mon_vort3.F mon_writestats_rl.F mon_writestats_rs.F obcs_add_tides.F obcs_adjust.F obcs_adjust_uvice.F obcs_apply_eta.F obcs_apply_ptracer.F obcs_apply_r_star.F obcs_apply_seaice.F obcs_apply_surf_dr.F obcs_apply_ts.F obcs_apply_uv.F obcs_apply_uvice.F obcs_apply_w.F obcs_balance_flow.F obcs_calc.F obcs_calc_stevens.F obcs_check_depths.F obcs_check.F obcs_copy_tracer.F obcs_copy_uv_n.F obcs_diag_balance.F obcs_exchanges.F obcs_exf_load.F obcs_fields_load.F obcs_init_fixed.F obcs_init_variables.F obcs_monitor.F obcs_mon_stats.F obcs_output.F obcs_prescribe_read.F obcs_readparms.F obcs_read_pickup.F obcs_save_uv_n.F obcs_seaice_sponge.F obcs_set_connect.F obcs_sponge.F obcs_u1_adv_tracer.F obcs_write_pickup.F orlanski_east.F orlanski_init.F orlanski_north.F orlanski_south.F orlanski_west.F get_write_global_fld.F read_fld_xy_rl.F read_fld_xy_rs.F read_fld_xyz_rl.F read_fld_xyz_rs.F read_glvec_rl.F read_glvec_rs.F read_mflds.F read_rec.F rw_get_suffix.F set_write_global_fld.F write_fld_3d_rl.F write_fld_3d_rs.F write_fld_s3d_rl.F write_fld_s3d_rs.F write_fld_xy_rl.F write_fld_xy_rs.F write_fld_xyz_rl.F write_fld_xyz_rs.F write_glvec_rl.F write_glvec_rs.F write_local_rl.F write_local_rs.F write_rec.F shelfice_check.F shelfice_cost_accumulate.F shelfice_cost_final.F shelfice_cost_shifwflx.F shelfice_diagnostics_drag.F shelfice_forcing.F shelfice_forcing_surf.F shelfice_init_depths.F shelfice_init_fixed.F shelfice_init_varia.F shelfice_mask_seaice.F shelfice_mnc_init.F shelfice_output.F shelfice_readparms.F shelfice_read_pickup.F shelfice_remesh_calc_w.F shelfice_remesh_c_mask.F shelfice_remeshing.F shelfice_remesh_state.F shelfice_remesh_uv_mask.F shelfice_step_icemass.F shelfice_thermodynamics.F shelfice_u_drag_coeff.F shelfice_v_drag_coeff.F shelfice_write_pickup.F timeave_cumul_1k1t.F timeave_cumul_1t.F timeave_cumul_1vfc.F timeave_cumul_2v.F timeave_cumul_2vfc.F timeave_cumulate.F timeave_cumul_dif_1t.F timeave_init_fixed.F timeave_norma_2v.F timeave_normalize.F timeave_reset.F timeave_statvars.F timeave_statv_write.F timeave_surf_flux.F all_proc_die.F bar2.F bar_check.F barrier.F check_threads.F comm_stats.F cumulsum_z_tile.F different_multiple.F diff_phase_multiple.F eeboot.F eedata_example.F eeintro_msg.F eeset_parms.F eewrite_eeenv.F exch0_r4.F exch0_r8.F exch0_rl.F exch0_rs.F exch1_bg_r4_cube.F exch1_bg_r8_cube.F exch1_bg_rl_cube.F exch1_bg_rs_cube.F exch1_r4_cube.F exch1_r4.F exch1_r8_cube.F exch1_r8.F exch1_rl_ad.F exch1_rl_cube_ad.F exch1_rl_cube.F exch1_rl.F exch1_rs_ad.F exch1_rs_cube_ad.F exch1_rs_cube.F exch1_rs.F exch1_uv_r4_cube.F exch1_uv_r8_cube.F exch1_uv_rl_cube.F exch1_uv_rs_cube.F exch1_z_r4_cube.F exch1_z_r8_cube.F exch1_z_rl_cube.F exch1_z_rs_cube.F exch_3d_r4.F exch_3d_r8.F exch_3d_rl.F exch_3d_rs.F exch_cycle_ebl.F exch_init.F exch_r4_recv_get_x.F exch_r4_recv_get_y.F exch_r4_send_put_x.F exch_r4_send_put_y.F exch_r8_recv_get_x.F exch_r8_recv_get_y.F exch_r8_send_put_x.F exch_r8_send_put_y.F exch_rl_recv_get_x.F exch_rl_recv_get_y.F exch_rl_send_put_x.F exch_rl_send_put_y.F exch_rs_recv_get_x.F exch_rs_recv_get_y.F exch_rs_send_put_x.F exch_rs_send_put_y.F exch_s3d_r4.F exch_s3d_r8.F exch_s3d_rl.F exch_s3d_rs.F exch_sm_3d_r4.F exch_sm_3d_r8.F exch_sm_3d_rl.F exch_sm_3d_rs.F exch_uv_3d_r4.F exch_uv_3d_r8.F exch_uv_3d_rl.F exch_uv_3d_rs.F exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rs.F exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rs.F exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rs.F exch_uv_xy_r4.F exch_uv_xy_r8.F exch_uv_xy_rl.F exch_uv_xy_rs.F exch_uv_xyz_r4.F exch_uv_xyz_r8.F exch_uv_xyz_rl.F exch_uv_xyz_rs.F exch_xy_r4.F exch_xy_r8.F exch_xy_rl.F exch_xy_rs.F exch_xyz_r4.F exch_xyz_r8.F exch_xyz_rl.F exch_xyz_rs.F exch_z_3d_r4.F exch_z_3d_r8.F exch_z_3d_rl.F exch_z_3d_rs.F fill_cs_corner_ag_rl.F fill_cs_corner_tr_rl.F fill_cs_corner_uv_rl.F fill_cs_corner_uv_rs.F fool_the_compiler.F gather_2d_r4.F gather_2d_r8.F gather_2d_wh_r4.F gather_2d_wh_r8.F gather_vec_r4.F gather_vec_r8.F gather_xz.F gather_yz.F get_periodic_interval.F global_max.F global_sum.F global_sum_singlecpu.F global_sum_tile.F global_vec_sum.F gsum.F ini_communication_patterns.F ini_procs.F ini_threading_environment.F lef_zero.F main.F master_cpu_io.F master_cpu_thread.F mds_byteswapi4.F mds_byteswapr4.F mds_byteswapr8.F mdsfindunit.F mds_flush.F mds_reclen.F memsync.F nml_change_syntax.F nml_set_terminator.F open_copy_data_file.F print.F reset_halo.F scatter_2d_r4.F scatter_2d_r8.F scatter_2d_wh_r4.F scatter_2d_wh_r8.F scatter_vec_r4.F scatter_vec_r8.F scatter_xz.F scatter_yz.F stop_if_error.F timers.F utils.F write_utils.F adams_bashforth2.F adams_bashforth3.F add_walls2masks.F apply_forcing.F calc_3d_diffusivity.F calc_adv_flow.F calc_div_ghat.F calc_eddy_stress.F calc_grad_phi_fv.F calc_grad_phi_hyd.F calc_grad_phi_surf.F calc_grid_angles.F calc_gw.F calc_ivdc.F calc_oce_mxlayer.F calc_phi_hyd.F calc_r_star.F calc_surf_dr.F calc_viscosity.F calc_wsurf_tr.F cg2d_ex0.F cg2d.F cg2d_nsa.F cg2d_sr.F cg3d_ex0.F cg3d.F check_pickup.F config_check.F config_summary.F convective_adjustment.F convective_adjustment_ini.F convectively_mixtracer.F convective_weights.F correction_step.F cycle_ab_tracer.F cycle_tracer.F diags_oceanic_surf_flux.F diags_phi_hyd.F diags_phi_rlow.F diags_rho.F diags_sound_speed.F do_atmospheric_phys.F do_fields_blocking_exchanges.F do_stagger_fields_exchanges.F do_statevars_diags.F do_statevars_tave.F do_the_model_io.F do_write_pickup.F dynamics.F external_fields_load.F external_forcing.F external_forcing_surf.F find_alpha.F find_hyd_press_1d.F find_rho.F forcing_surf_relax.F forward_step.F freesurf_rescale_g.F freeze_surface.F grad_sigma.F gsw_teos10.F impldiff.F ini_cartesian_grid.F ini_cg2d.F ini_cg3d.F ini_cori.F ini_curvilinear_grid.F ini_cylinder_grid.F ini_depths.F ini_dynvars.F ini_eos.F ini_ffields.F ini_fields.F ini_forcing.F ini_global_domain.F ini_grid.F ini_linear_phisurf.F ini_local_grid.F ini_masks_etc.F ini_mixing.F ini_mnc_vars.F ini_model_io.F ini_nh_fields.F ini_nh_vars.F ini_nlfs_vars.F ini_parms.F ini_p_ground.F ini_pressure.F ini_psurf.F ini_salt.F ini_sigma_hfac.F ini_spherical_polar_grid.F ini_theta.F initialise_fixed.F initialise_varia.F ini_vel.F ini_vertical_grid.F integrate_for_w.F integr_continuity.F load_fields_driver.F load_grid_spacing.F load_ref_files.F main_do_loop.F momentum_correction_step.F packages_boot.F packages_check.F packages_error_msg.F packages_init_fixed.F packages_init_variables.F packages_print_msg.F packages_readparms.F packages_unused_msg.F packages_write_pickup.F plot_field.F port_rand.F post_cg3d.F pre_cg3d.F pressure_for_eos.F read_pickup.F remove_mean.F reset_nlfs_vars.F rotate_spherical_polar_grid.F rotate_uv2en.F salt_integrate.F seawater.F set_defaults.F set_grid_factors.F set_parms.F set_ref_state.F solve_for_pressure.F solve_pentadiagonal.F solve_tridiagonal.F solve_uv_tridiago.F state_summary.F swfrac.F taueddy_init_varia.F taueddy_tendency_apply.F temp_integrate.F the_main_loop.F the_model_main.F thermodynamics.F timestep.F timestep_tracer.F timestep_wvel.F tracers_correction_step.F tracers_iigw_correction.F turnoff_model_io.F update_cg2d.F update_etah.F update_etaws.F update_masks_etc.F update_r_star.F update_sigma.F update_surf_dr.F write_grid.F write_pickup.F write_state.F
Appending dependencies to Makefile
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/f90mkdepend >> Makefile
WARNING: f90mkdepend: no source file found for module `petscdtbinomial()`
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WARNING: f90mkdepend: no source file found for module `petsccount_fmt`
WARNING: f90mkdepend: no source file found for module of
WARNING: f90mkdepend: no source file found for module `petscviewerfilesetmode()`
rm -f makedepend.out

[41;37m   step #6: RunUncoupledMITgcm   [0m

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[41;37m   step #7: CreateMesh   [0m

Info: creating coordinates in polar stereographic (Std Latitude: 71S Meridian: 0)
saving model as: Models/IceOcean.CreateMesh

[41;37m   step #8: MeshGeometry   [0m

saving model as: Models/IceOcean.MeshGeometry

[41;37m   step #9: ParameterizeIce   [0m

saving model as: Models/IceOcean.ParameterizeIce

[41;37m   step #10: RunUncoupledISSM   [0m

checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/12  time [yr]: 0.08 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 2/12  time [yr]: 0.17 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 3/12  time [yr]: 0.25 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 4/12  time [yr]: 0.33 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 5/12  time [yr]: 0.42 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 6/12  time [yr]: 0.50 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 7/12  time [yr]: 0.58 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 8/12  time [yr]: 0.67 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 9/12  time [yr]: 0.75 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 10/12  time [yr]: 0.83 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 11/12  time [yr]: 0.92 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 12/12  time [yr]: 1.00 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0989614
   Total Core solution elapsed time:       2.80255
   Linear solver elapsed time:             1.81656 (65%)

   Total elapsed time: 0 hrs 0 min 2 sec
loading results from cluster
saving model as: Models/IceOcean.RunUncoupledISSM

[41;37m   step #11: RunCoupledMITgcmISSM   [0m

Year: 0
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.08 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0365001
   Total Core solution elapsed time:       0.533997
   Linear solver elapsed time:             0.355232 (67%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.083333
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.17 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0312853
   Total Core solution elapsed time:       0.279411
   Linear solver elapsed time:             0.17689 (63%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.16667
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.25 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0292121
   Total Core solution elapsed time:       0.240668
   Linear solver elapsed time:             0.152593 (63%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.25
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.33 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0426504
   Total Core solution elapsed time:       0.242837
   Linear solver elapsed time:             0.154103 (63%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.33333
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.42 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0466164
   Total Core solution elapsed time:       0.269917
   Linear solver elapsed time:             0.157945 (59%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.41667
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.50 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0367091
   Total Core solution elapsed time:       0.227958
   Linear solver elapsed time:             0.14647 (64%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.5
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.58 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0399813
   Total Core solution elapsed time:       0.221808
   Linear solver elapsed time:             0.144386 (65%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.58333
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/2  time [yr]: 0.67 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0306688
   Total Core solution elapsed time:       0.210346
   Linear solver elapsed time:             0.13549 (64%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.66667
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.75 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0431139
   Total Core solution elapsed time:       0.203914
   Linear solver elapsed time:             0.126253 (62%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.75
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.83 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0295723
   Total Core solution elapsed time:       0.22669
   Linear solver elapsed time:             0.144615 (64%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.83333
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/2  time [yr]: 0.92 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0548095
   Total Core solution elapsed time:       0.265064
   Linear solver elapsed time:             0.156042 (59%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.91667
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 1.00 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0435724
   Total Core solution elapsed time:       0.27974
   Linear solver elapsed time:             0.183384 (66%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 1
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 1.08 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0329071
   Total Core solution elapsed time:       0.219134
   Linear solver elapsed time:             0.139345 (64%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
saving model as: Models/IceOcean.RunCoupledMITgcmISSM
SUCCESS difference: 0       <   2e-13 test id: 4001 test name: IceOcean field: Base1
SUCCESS difference: 0       <   1e-13 test id: 4001 test name: IceOcean field: Melting1
SUCCESS difference: 8e-15   <   8e-06 test id: 4001 test name: IceOcean field: Vx2
SUCCESS difference: 1.2e-14 <   7e-06 test id: 4001 test name: IceOcean field: Vy2
SUCCESS difference: 1.1e-15 <   2e-07 test id: 4001 test name: IceOcean field: Thickness2
SUCCESS difference: 2.5e-16 <   2e-08 test id: 4001 test name: IceOcean field: Base2
SUCCESS difference: 3.4e-16 <   3e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset2
SUCCESS difference: 0       <   1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate2
SUCCESS difference: 0       <   1e-13 test id: 4001 test name: IceOcean field: Melting2
SUCCESS difference: 1.4e-14 <   8e-06 test id: 4001 test name: IceOcean field: Vx3
SUCCESS difference: 1.1e-14 <   7e-06 test id: 4001 test name: IceOcean field: Vy3
SUCCESS difference: 1.7e-15 <   4e-07 test id: 4001 test name: IceOcean field: Thickness3
SUCCESS difference: 4.3e-16 <   3e-08 test id: 4001 test name: IceOcean field: Base3
SUCCESS difference: 3.4e-16 <   5e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset3
SUCCESS difference: 0       <   1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate3
SUCCESS difference: 0       <   6e-08 test id: 4001 test name: IceOcean field: Melting3
SUCCESS difference: 1.4e-14 <   8e-06 test id: 4001 test name: IceOcean field: Vx4
SUCCESS difference: 7e-15   <   7e-06 test id: 4001 test name: IceOcean field: Vy4
SUCCESS difference: 2.2e-15 <   5e-07 test id: 4001 test name: IceOcean field: Thickness4
SUCCESS difference: 4.6e-16 <   4e-08 test id: 4001 test name: IceOcean field: Base4
SUCCESS difference: 3.4e-16 <   8e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset4
SUCCESS difference: 0       <   6e-08 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate4
SUCCESS difference: 0       <   3e-07 test id: 4001 test name: IceOcean field: Melting4
+++ exit code: 0
+++ error: 0

+++ Running case: MATLAB-4001 
+++ working dir: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/nightlylog

[41;37m   step #1: Parameters   [0m

saving data in: Models/IceOcean.Parameters

[41;37m   step #2: Bathymetry   [0m

saving data in: Models/IceOcean.Bathymetry

[41;37m   step #3: IceSheetGeometry   [0m

saving data in: Models/IceOcean.IceSheetGeometry

[41;37m   step #4: GetMITgcm   [0m

--2024-07-29 03:45:50--  https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz
Resolving github.com (github.com)... 140.82.116.4
Connecting to github.com (github.com)|140.82.116.4|:443... connected.
HTTP request sent, awaiting response... 302 Found
Location: https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i [following]
--2024-07-29 03:45:51--  https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i
Resolving codeload.github.com (codeload.github.com)... 140.82.116.10
Connecting to codeload.github.com (codeload.github.com)|140.82.116.10|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: unspecified [application/x-gzip]
Saving to: checkpoint68i.tar.gz

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2024-07-29 03:46:02 (15.2 MB/s) - checkpoint68i.tar.gz saved [172875785]

MITgcm-checkpoint68i/
MITgcm-checkpoint68i/.github/
MITgcm-checkpoint68i/.github/ISSUE_TEMPLATE.md
MITgcm-checkpoint68i/.github/PULL_REQUEST_TEMPLATE.md
MITgcm-checkpoint68i/.github/workflows/
MITgcm-checkpoint68i/.github/workflows/build_testing.yml
MITgcm-checkpoint68i/.gitignore
MITgcm-checkpoint68i/.readthedocs.yml
MITgcm-checkpoint68i/LICENSE.txt
MITgcm-checkpoint68i/README.md
MITgcm-checkpoint68i/doc/
MITgcm-checkpoint68i/doc/Makefile
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MITgcm-checkpoint68i/doc/_static/css/custom.css
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MITgcm-checkpoint68i/doc/algorithm/
MITgcm-checkpoint68i/doc/algorithm/adv-schemes.rst
MITgcm-checkpoint68i/doc/algorithm/algorithm.rst
MITgcm-checkpoint68i/doc/algorithm/c-grid.rst
MITgcm-checkpoint68i/doc/algorithm/crank-nicol.rst
MITgcm-checkpoint68i/doc/algorithm/figs/
MITgcm-checkpoint68i/doc/algorithm/figs/adams-bashforth-staggered.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/adams-bashforth-staggered.svg
MITgcm-checkpoint68i/doc/algorithm/figs/adams-bashforth-sync.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/adams-bashforth-sync.svg
MITgcm-checkpoint68i/doc/algorithm/figs/advect-1d-hi.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/advect-1d-hi.png
MITgcm-checkpoint68i/doc/algorithm/figs/advect-1d-lo.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/advect-1d-lo.png
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-hi-diag.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-hi-diag.png
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-lo-diag.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-lo-diag.png
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-mid-diag.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-mid-diag.png
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MITgcm-checkpoint68i/eesupp/src/exch1_bg_rx_cube.template
MITgcm-checkpoint68i/eesupp/src/exch1_rx.template
MITgcm-checkpoint68i/eesupp/src/exch1_rx_ad.template
MITgcm-checkpoint68i/eesupp/src/exch1_rx_cube.template
MITgcm-checkpoint68i/eesupp/src/exch1_rx_cube_ad.template
MITgcm-checkpoint68i/eesupp/src/exch1_uv_rx_cube.template
MITgcm-checkpoint68i/eesupp/src/exch1_z_rx_cube.template
MITgcm-checkpoint68i/eesupp/src/exch_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_ad_diff.list
MITgcm-checkpoint68i/eesupp/src/exch_cycle_ebl.F
MITgcm-checkpoint68i/eesupp/src/exch_init.F
MITgcm-checkpoint68i/eesupp/src/exch_rx_recv_get_x.template
MITgcm-checkpoint68i/eesupp/src/exch_rx_recv_get_y.template
MITgcm-checkpoint68i/eesupp/src/exch_rx_send_put_x.template
MITgcm-checkpoint68i/eesupp/src/exch_rx_send_put_y.template
MITgcm-checkpoint68i/eesupp/src/exch_s3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_sm_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_agrid_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_bgrid_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_dgrid_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_xy_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_xyz_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_xy_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_xyz_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_z_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_ag_rl.F
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_tr_rl.F
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_uv_rl.F
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_uv_rs.F
MITgcm-checkpoint68i/eesupp/src/fool_the_compiler.F
MITgcm-checkpoint68i/eesupp/src/gather_2d_rx.template
MITgcm-checkpoint68i/eesupp/src/gather_2d_wh_rx.template
MITgcm-checkpoint68i/eesupp/src/gather_vec_rx.template
MITgcm-checkpoint68i/eesupp/src/gather_xz.F
MITgcm-checkpoint68i/eesupp/src/gather_yz.F
MITgcm-checkpoint68i/eesupp/src/get_periodic_interval.F
MITgcm-checkpoint68i/eesupp/src/global_max.F
MITgcm-checkpoint68i/eesupp/src/global_sum.F
MITgcm-checkpoint68i/eesupp/src/global_sum_singlecpu.F
MITgcm-checkpoint68i/eesupp/src/global_sum_tile.F
MITgcm-checkpoint68i/eesupp/src/global_vec_sum.F
MITgcm-checkpoint68i/eesupp/src/gsl_ieee_env.c
MITgcm-checkpoint68i/eesupp/src/gsum.F
MITgcm-checkpoint68i/eesupp/src/ini_communication_patterns.F
MITgcm-checkpoint68i/eesupp/src/ini_procs.F
MITgcm-checkpoint68i/eesupp/src/ini_threading_environment.F
MITgcm-checkpoint68i/eesupp/src/lef_zero.F
MITgcm-checkpoint68i/eesupp/src/main.F
MITgcm-checkpoint68i/eesupp/src/master_cpu_io.F
MITgcm-checkpoint68i/eesupp/src/master_cpu_thread.F
MITgcm-checkpoint68i/eesupp/src/mds_byteswapi4.F
MITgcm-checkpoint68i/eesupp/src/mds_byteswapr4.F
MITgcm-checkpoint68i/eesupp/src/mds_byteswapr8.F
MITgcm-checkpoint68i/eesupp/src/mds_flush.F
MITgcm-checkpoint68i/eesupp/src/mds_reclen.F
MITgcm-checkpoint68i/eesupp/src/mdsfindunit.F
MITgcm-checkpoint68i/eesupp/src/memsync.F
MITgcm-checkpoint68i/eesupp/src/nml_change_syntax.F
MITgcm-checkpoint68i/eesupp/src/nml_set_terminator.F
MITgcm-checkpoint68i/eesupp/src/open_copy_data_file.F
MITgcm-checkpoint68i/eesupp/src/print.F
MITgcm-checkpoint68i/eesupp/src/ptwrapper.c
MITgcm-checkpoint68i/eesupp/src/reset_halo.F
MITgcm-checkpoint68i/eesupp/src/scatter_2d_rx.template
MITgcm-checkpoint68i/eesupp/src/scatter_2d_wh_rx.template
MITgcm-checkpoint68i/eesupp/src/scatter_vec_rx.template
MITgcm-checkpoint68i/eesupp/src/scatter_xz.F
MITgcm-checkpoint68i/eesupp/src/scatter_yz.F
MITgcm-checkpoint68i/eesupp/src/setdir.c
MITgcm-checkpoint68i/eesupp/src/setrlstk.c
MITgcm-checkpoint68i/eesupp/src/sigreg.c
MITgcm-checkpoint68i/eesupp/src/stop_if_error.F
MITgcm-checkpoint68i/eesupp/src/tim.c
MITgcm-checkpoint68i/eesupp/src/timer_stats.c
MITgcm-checkpoint68i/eesupp/src/timers.F
MITgcm-checkpoint68i/eesupp/src/utils.F
MITgcm-checkpoint68i/eesupp/src/write_utils.F
MITgcm-checkpoint68i/jobs/
MITgcm-checkpoint68i/jobs/run_mitgcm_aer.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_eaps.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_gfdl.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_itrda.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_sp4_bluesky.csh
MITgcm-checkpoint68i/jobs/run_optim.csh
MITgcm-checkpoint68i/lsopt/
MITgcm-checkpoint68i/lsopt/Makefile
MITgcm-checkpoint68i/lsopt/Makefile_macosx
MITgcm-checkpoint68i/lsopt/README.md
MITgcm-checkpoint68i/lsopt/blas1.h
MITgcm-checkpoint68i/lsopt/cubic.F
MITgcm-checkpoint68i/lsopt/data.ctrl
MITgcm-checkpoint68i/lsopt/data.ecco
MITgcm-checkpoint68i/lsopt/data.optim
MITgcm-checkpoint68i/lsopt/dgscale.F
MITgcm-checkpoint68i/lsopt/dostore.F
MITgcm-checkpoint68i/lsopt/hessupd.F
MITgcm-checkpoint68i/lsopt/instore.F
MITgcm-checkpoint68i/lsopt/libblas1.a_IRIX64.gz
MITgcm-checkpoint68i/lsopt/libblas1.a_SUN.gz
MITgcm-checkpoint68i/lsopt/libgoto_it2-r0.95.so.gz
MITgcm-checkpoint68i/lsopt/libgoto_p4_512-r0.94.so.gz
MITgcm-checkpoint68i/lsopt/lsline.F
MITgcm-checkpoint68i/lsopt/lsopt_doc.txt
MITgcm-checkpoint68i/lsopt/lsopt_top.F
MITgcm-checkpoint68i/lsopt/lsupdxx.F
MITgcm-checkpoint68i/lsopt/lswri.F
MITgcm-checkpoint68i/lsopt/outstore.F
MITgcm-checkpoint68i/model/
MITgcm-checkpoint68i/model/inc/
MITgcm-checkpoint68i/model/inc/CG2D.h
MITgcm-checkpoint68i/model/inc/CG3D.h
MITgcm-checkpoint68i/model/inc/CPP_OPTIONS.h
MITgcm-checkpoint68i/model/inc/DXC_MACROS.h
MITgcm-checkpoint68i/model/inc/DXF_MACROS.h
MITgcm-checkpoint68i/model/inc/DXG_MACROS.h
MITgcm-checkpoint68i/model/inc/DXV_MACROS.h
MITgcm-checkpoint68i/model/inc/DYC_MACROS.h
MITgcm-checkpoint68i/model/inc/DYF_MACROS.h
MITgcm-checkpoint68i/model/inc/DYG_MACROS.h
MITgcm-checkpoint68i/model/inc/DYNVARS.h
MITgcm-checkpoint68i/model/inc/DYU_MACROS.h
MITgcm-checkpoint68i/model/inc/EOS.h
MITgcm-checkpoint68i/model/inc/FCORI_MACROS.h
MITgcm-checkpoint68i/model/inc/FFIELDS.h
MITgcm-checkpoint68i/model/inc/GRID.h
MITgcm-checkpoint68i/model/inc/GRID_MACROS.h
MITgcm-checkpoint68i/model/inc/HFACC_MACROS.h
MITgcm-checkpoint68i/model/inc/HFACS_MACROS.h
MITgcm-checkpoint68i/model/inc/HFACW_MACROS.h
MITgcm-checkpoint68i/model/inc/MASKS_MACROS.h
MITgcm-checkpoint68i/model/inc/MASKW_MACROS.h
MITgcm-checkpoint68i/model/inc/NH_VARS.h
MITgcm-checkpoint68i/model/inc/PARAMS.h
MITgcm-checkpoint68i/model/inc/RAS_MACROS.h
MITgcm-checkpoint68i/model/inc/RAW_MACROS.h
MITgcm-checkpoint68i/model/inc/RA_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXC_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXF_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXG_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXV_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYC_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYF_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYG_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYU_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_HFACC_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_HFACS_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_HFACW_MACROS.h
MITgcm-checkpoint68i/model/inc/RESTART.h
MITgcm-checkpoint68i/model/inc/SET_GRID.h
MITgcm-checkpoint68i/model/inc/SIZE.h
MITgcm-checkpoint68i/model/inc/SOLVE_FOR_PRESSURE.h
MITgcm-checkpoint68i/model/inc/SOLVE_FOR_PRESSURE3D.h
MITgcm-checkpoint68i/model/inc/SURFACE.h
MITgcm-checkpoint68i/model/inc/TANPHIATU_MACROS.h
MITgcm-checkpoint68i/model/inc/TANPHIATV_MACROS.h
MITgcm-checkpoint68i/model/inc/THE_MODEL_COMMON_BLOCKS.h
MITgcm-checkpoint68i/model/inc/XC_MACROS.h
MITgcm-checkpoint68i/model/inc/YC_MACROS.h
MITgcm-checkpoint68i/model/src/
MITgcm-checkpoint68i/model/src/adams_bashforth2.F
MITgcm-checkpoint68i/model/src/adams_bashforth3.F
MITgcm-checkpoint68i/model/src/add_walls2masks.F
MITgcm-checkpoint68i/model/src/apply_forcing.F
MITgcm-checkpoint68i/model/src/calc_3d_diffusivity.F
MITgcm-checkpoint68i/model/src/calc_adv_flow.F
MITgcm-checkpoint68i/model/src/calc_div_ghat.F
MITgcm-checkpoint68i/model/src/calc_eddy_stress.F
MITgcm-checkpoint68i/model/src/calc_grad_phi_fv.F
MITgcm-checkpoint68i/model/src/calc_grad_phi_hyd.F
MITgcm-checkpoint68i/model/src/calc_grad_phi_surf.F
MITgcm-checkpoint68i/model/src/calc_grid_angles.F
MITgcm-checkpoint68i/model/src/calc_gw.F
MITgcm-checkpoint68i/model/src/calc_ivdc.F
MITgcm-checkpoint68i/model/src/calc_oce_mxlayer.F
MITgcm-checkpoint68i/model/src/calc_phi_hyd.F
MITgcm-checkpoint68i/model/src/calc_r_star.F
MITgcm-checkpoint68i/model/src/calc_surf_dr.F
MITgcm-checkpoint68i/model/src/calc_viscosity.F
MITgcm-checkpoint68i/model/src/calc_wsurf_tr.F
MITgcm-checkpoint68i/model/src/cg2d.F
MITgcm-checkpoint68i/model/src/cg2d_ex0.F
MITgcm-checkpoint68i/model/src/cg2d_nsa.F
MITgcm-checkpoint68i/model/src/cg2d_sr.F
MITgcm-checkpoint68i/model/src/cg3d.F
MITgcm-checkpoint68i/model/src/cg3d_ex0.F
MITgcm-checkpoint68i/model/src/check_pickup.F
MITgcm-checkpoint68i/model/src/config_check.F
MITgcm-checkpoint68i/model/src/config_summary.F
MITgcm-checkpoint68i/model/src/convective_adjustment.F
MITgcm-checkpoint68i/model/src/convective_adjustment_ini.F
MITgcm-checkpoint68i/model/src/convective_weights.F
MITgcm-checkpoint68i/model/src/convectively_mixtracer.F
MITgcm-checkpoint68i/model/src/correction_step.F
MITgcm-checkpoint68i/model/src/cycle_ab_tracer.F
MITgcm-checkpoint68i/model/src/cycle_tracer.F
MITgcm-checkpoint68i/model/src/diags_oceanic_surf_flux.F
MITgcm-checkpoint68i/model/src/diags_phi_hyd.F
MITgcm-checkpoint68i/model/src/diags_phi_rlow.F
MITgcm-checkpoint68i/model/src/diags_rho.F
MITgcm-checkpoint68i/model/src/diags_sound_speed.F
MITgcm-checkpoint68i/model/src/do_atmospheric_phys.F
MITgcm-checkpoint68i/model/src/do_fields_blocking_exchanges.F
MITgcm-checkpoint68i/model/src/do_oceanic_phys.F
MITgcm-checkpoint68i/model/src/do_stagger_fields_exchanges.F
MITgcm-checkpoint68i/model/src/do_statevars_diags.F
MITgcm-checkpoint68i/model/src/do_statevars_tave.F
MITgcm-checkpoint68i/model/src/do_the_model_io.F
MITgcm-checkpoint68i/model/src/do_write_pickup.F
MITgcm-checkpoint68i/model/src/dynamics.F
MITgcm-checkpoint68i/model/src/external_fields_load.F
MITgcm-checkpoint68i/model/src/external_forcing.F
MITgcm-checkpoint68i/model/src/external_forcing_surf.F
MITgcm-checkpoint68i/model/src/find_alpha.F
MITgcm-checkpoint68i/model/src/find_hyd_press_1d.F
MITgcm-checkpoint68i/model/src/find_rho.F
MITgcm-checkpoint68i/model/src/forcing_surf_relax.F
MITgcm-checkpoint68i/model/src/forward_step.F
MITgcm-checkpoint68i/model/src/freesurf_rescale_g.F
MITgcm-checkpoint68i/model/src/freeze_surface.F
MITgcm-checkpoint68i/model/src/grad_sigma.F
MITgcm-checkpoint68i/model/src/gsw_teos10.F
MITgcm-checkpoint68i/model/src/impldiff.F
MITgcm-checkpoint68i/model/src/ini_cartesian_grid.F
MITgcm-checkpoint68i/model/src/ini_cg2d.F
MITgcm-checkpoint68i/model/src/ini_cg3d.F
MITgcm-checkpoint68i/model/src/ini_cori.F
MITgcm-checkpoint68i/model/src/ini_curvilinear_grid.F
MITgcm-checkpoint68i/model/src/ini_cylinder_grid.F
MITgcm-checkpoint68i/model/src/ini_depths.F
MITgcm-checkpoint68i/model/src/ini_dynvars.F
MITgcm-checkpoint68i/model/src/ini_eos.F
MITgcm-checkpoint68i/model/src/ini_ffields.F
MITgcm-checkpoint68i/model/src/ini_fields.F
MITgcm-checkpoint68i/model/src/ini_forcing.F
MITgcm-checkpoint68i/model/src/ini_global_domain.F
MITgcm-checkpoint68i/model/src/ini_grid.F
MITgcm-checkpoint68i/model/src/ini_linear_phisurf.F
MITgcm-checkpoint68i/model/src/ini_local_grid.F
MITgcm-checkpoint68i/model/src/ini_masks_etc.F
MITgcm-checkpoint68i/model/src/ini_mixing.F
MITgcm-checkpoint68i/model/src/ini_mnc_vars.F
MITgcm-checkpoint68i/model/src/ini_model_io.F
MITgcm-checkpoint68i/model/src/ini_nh_fields.F
MITgcm-checkpoint68i/model/src/ini_nh_vars.F
MITgcm-checkpoint68i/model/src/ini_nlfs_vars.F
MITgcm-checkpoint68i/model/src/ini_p_ground.F
MITgcm-checkpoint68i/model/src/ini_parms.F
MITgcm-checkpoint68i/model/src/ini_pressure.F
MITgcm-checkpoint68i/model/src/ini_psurf.F
MITgcm-checkpoint68i/model/src/ini_salt.F
MITgcm-checkpoint68i/model/src/ini_sigma_hfac.F
MITgcm-checkpoint68i/model/src/ini_spherical_polar_grid.F
MITgcm-checkpoint68i/model/src/ini_theta.F
MITgcm-checkpoint68i/model/src/ini_vel.F
MITgcm-checkpoint68i/model/src/ini_vertical_grid.F
MITgcm-checkpoint68i/model/src/initialise_fixed.F
MITgcm-checkpoint68i/model/src/initialise_varia.F
MITgcm-checkpoint68i/model/src/integr_continuity.F
MITgcm-checkpoint68i/model/src/integrate_for_w.F
MITgcm-checkpoint68i/model/src/load_fields_driver.F
MITgcm-checkpoint68i/model/src/load_grid_spacing.F
MITgcm-checkpoint68i/model/src/load_ref_files.F
MITgcm-checkpoint68i/model/src/main_do_loop.F
MITgcm-checkpoint68i/model/src/model_ad_diff.list
MITgcm-checkpoint68i/model/src/momentum_correction_step.F
MITgcm-checkpoint68i/model/src/packages_boot.F
MITgcm-checkpoint68i/model/src/packages_check.F
MITgcm-checkpoint68i/model/src/packages_error_msg.F
MITgcm-checkpoint68i/model/src/packages_init_fixed.F
MITgcm-checkpoint68i/model/src/packages_init_variables.F
MITgcm-checkpoint68i/model/src/packages_print_msg.F
MITgcm-checkpoint68i/model/src/packages_readparms.F
MITgcm-checkpoint68i/model/src/packages_unused_msg.F
MITgcm-checkpoint68i/model/src/packages_write_pickup.F
MITgcm-checkpoint68i/model/src/plot_field.F
MITgcm-checkpoint68i/model/src/port_rand.F
MITgcm-checkpoint68i/model/src/post_cg3d.F
MITgcm-checkpoint68i/model/src/pre_cg3d.F
MITgcm-checkpoint68i/model/src/pressure_for_eos.F
MITgcm-checkpoint68i/model/src/read_pickup.F
MITgcm-checkpoint68i/model/src/remove_mean.F
MITgcm-checkpoint68i/model/src/reset_nlfs_vars.F
MITgcm-checkpoint68i/model/src/rotate_spherical_polar_grid.F
MITgcm-checkpoint68i/model/src/rotate_uv2en.F
MITgcm-checkpoint68i/model/src/salt_integrate.F
MITgcm-checkpoint68i/model/src/seawater.F
MITgcm-checkpoint68i/model/src/set_defaults.F
MITgcm-checkpoint68i/model/src/set_grid_factors.F
MITgcm-checkpoint68i/model/src/set_parms.F
MITgcm-checkpoint68i/model/src/set_ref_state.F
MITgcm-checkpoint68i/model/src/solve_for_pressure.F
MITgcm-checkpoint68i/model/src/solve_pentadiagonal.F
MITgcm-checkpoint68i/model/src/solve_tridiagonal.F
MITgcm-checkpoint68i/model/src/solve_uv_tridiago.F
MITgcm-checkpoint68i/model/src/state_summary.F
MITgcm-checkpoint68i/model/src/swfrac.F
MITgcm-checkpoint68i/model/src/taueddy_init_varia.F
MITgcm-checkpoint68i/model/src/taueddy_tendency_apply.F
MITgcm-checkpoint68i/model/src/temp_integrate.F
MITgcm-checkpoint68i/model/src/the_main_loop.F
MITgcm-checkpoint68i/model/src/the_model_main.F
MITgcm-checkpoint68i/model/src/thermodynamics.F
MITgcm-checkpoint68i/model/src/timestep.F
MITgcm-checkpoint68i/model/src/timestep_tracer.F
MITgcm-checkpoint68i/model/src/timestep_wvel.F
MITgcm-checkpoint68i/model/src/tracers_correction_step.F
MITgcm-checkpoint68i/model/src/tracers_iigw_correction.F
MITgcm-checkpoint68i/model/src/turnoff_model_io.F
MITgcm-checkpoint68i/model/src/update_cg2d.F
MITgcm-checkpoint68i/model/src/update_etah.F
MITgcm-checkpoint68i/model/src/update_etaws.F
MITgcm-checkpoint68i/model/src/update_masks_etc.F
MITgcm-checkpoint68i/model/src/update_r_star.F
MITgcm-checkpoint68i/model/src/update_sigma.F
MITgcm-checkpoint68i/model/src/update_surf_dr.F
MITgcm-checkpoint68i/model/src/write_grid.F
MITgcm-checkpoint68i/model/src/write_pickup.F
MITgcm-checkpoint68i/model/src/write_state.F
MITgcm-checkpoint68i/optim/
MITgcm-checkpoint68i/optim/Makefile
MITgcm-checkpoint68i/optim/Makefile_macosx
MITgcm-checkpoint68i/optim/README.md
MITgcm-checkpoint68i/optim/blas1.h
MITgcm-checkpoint68i/optim/data.ctrl
MITgcm-checkpoint68i/optim/data.ecco
MITgcm-checkpoint68i/optim/data.optim
MITgcm-checkpoint68i/optim/flowchart_optim.txt
MITgcm-checkpoint68i/optim/minimization.h
MITgcm-checkpoint68i/optim/optim.h
MITgcm-checkpoint68i/optim/optim_initmod.F
MITgcm-checkpoint68i/optim/optim_main.F
MITgcm-checkpoint68i/optim/optim_numbmod.F
MITgcm-checkpoint68i/optim/optim_readdata.F
MITgcm-checkpoint68i/optim/optim_sub.F
MITgcm-checkpoint68i/optim/optim_write_control.F
MITgcm-checkpoint68i/optim/optim_writedata.F
MITgcm-checkpoint68i/optim/simul.F
MITgcm-checkpoint68i/optim/to_do.txt
MITgcm-checkpoint68i/optim/utils.F
MITgcm-checkpoint68i/optim/xerbla.F
MITgcm-checkpoint68i/pkg/
MITgcm-checkpoint68i/pkg/admtlm/
MITgcm-checkpoint68i/pkg/admtlm/ADMTLM_OPTIONS.h
MITgcm-checkpoint68i/pkg/admtlm/admtlm_bypassad.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_driver.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd2model.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_init_fixed.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_map.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_metric.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_model2dsvd.F
MITgcm-checkpoint68i/pkg/admtlm/arpack_debug.h
MITgcm-checkpoint68i/pkg/aim_v23/
MITgcm-checkpoint68i/pkg/aim_v23/AIM2DYN.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_CO2.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_FFIELDS.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_GRID.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_OPTIONS.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_PARAMS.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_SIZE.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_TAVE.h
MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2dyn.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2land.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2sioce.F
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MITgcm-checkpoint68i/pkg/autodiff/
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MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rhs.F
MITgcm-checkpoint68i/pkg/bbl/bbl_check.F
MITgcm-checkpoint68i/pkg/bbl/bbl_description.tex
MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_state.F
MITgcm-checkpoint68i/pkg/bbl/bbl_init_fixed.F
MITgcm-checkpoint68i/pkg/bbl/bbl_init_varia.F
MITgcm-checkpoint68i/pkg/bbl/bbl_read_pickup.F
MITgcm-checkpoint68i/pkg/bbl/bbl_readparms.F
MITgcm-checkpoint68i/pkg/bbl/bbl_tendency_apply.F
MITgcm-checkpoint68i/pkg/bbl/bbl_write_pickup.F
MITgcm-checkpoint68i/pkg/bling/
MITgcm-checkpoint68i/pkg/bling/BLING_LOAD.h
MITgcm-checkpoint68i/pkg/bling/BLING_OPTIONS.h
MITgcm-checkpoint68i/pkg/bling/BLING_VARS.h
MITgcm-checkpoint68i/pkg/bling/CHANGES_TO_BLING.txt
MITgcm-checkpoint68i/pkg/bling/bling_ad.flow
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_diff.list
MITgcm-checkpoint68i/pkg/bling/bling_airseaflux.F
MITgcm-checkpoint68i/pkg/bling/bling_bio.F
MITgcm-checkpoint68i/pkg/bling/bling_bio_nitrogen.F
MITgcm-checkpoint68i/pkg/bling/bling_carbon_chem.F
MITgcm-checkpoint68i/pkg/bling/bling_carbonate_init.F
MITgcm-checkpoint68i/pkg/bling/bling_carbonate_sys.F
MITgcm-checkpoint68i/pkg/bling/bling_description.txt
MITgcm-checkpoint68i/pkg/bling/bling_diagnostics_init.F
MITgcm-checkpoint68i/pkg/bling/bling_fields_load.F
MITgcm-checkpoint68i/pkg/bling/bling_ini_forcing.F
MITgcm-checkpoint68i/pkg/bling/bling_init_fixed.F
MITgcm-checkpoint68i/pkg/bling/bling_init_varia.F
MITgcm-checkpoint68i/pkg/bling/bling_light.F
MITgcm-checkpoint68i/pkg/bling/bling_main.F
MITgcm-checkpoint68i/pkg/bling/bling_min_val.F
MITgcm-checkpoint68i/pkg/bling/bling_mixedlayer.F
MITgcm-checkpoint68i/pkg/bling/bling_read_pickup.F
MITgcm-checkpoint68i/pkg/bling/bling_readparms.F
MITgcm-checkpoint68i/pkg/bling/bling_sgs.F
MITgcm-checkpoint68i/pkg/bling/bling_solvesaphe.F
MITgcm-checkpoint68i/pkg/bling/bling_tr_register.F
MITgcm-checkpoint68i/pkg/bling/bling_write_pickup.F
MITgcm-checkpoint68i/pkg/bulk_force/
MITgcm-checkpoint68i/pkg/bulk_force/BULKF.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_CONSERV.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_INT.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_PARAMS.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_TAVE.h
MITgcm-checkpoint68i/pkg/bulk_force/BULK_FORCE_OPTIONS.h
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_ave.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_fields_load.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_flux_adjust.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_forcing.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_aim.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lanl.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lay.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_init_varia.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_output.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_readparms.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_sh2rh_aim.F
MITgcm-checkpoint68i/pkg/cal/
MITgcm-checkpoint68i/pkg/cal/CAL_OPTIONS.h
MITgcm-checkpoint68i/pkg/cal/cal.h
MITgcm-checkpoint68i/pkg/cal/cal_ad_diff.list
MITgcm-checkpoint68i/pkg/cal/cal_addtime.F
MITgcm-checkpoint68i/pkg/cal/cal_checkdate.F
MITgcm-checkpoint68i/pkg/cal/cal_compdates.F
MITgcm-checkpoint68i/pkg/cal/cal_convdate.F
MITgcm-checkpoint68i/pkg/cal/cal_copydate.F
MITgcm-checkpoint68i/pkg/cal/cal_daysformonth.F
MITgcm-checkpoint68i/pkg/cal/cal_dayspermonth.F
MITgcm-checkpoint68i/pkg/cal/cal_description.tex
MITgcm-checkpoint68i/pkg/cal/cal_fulldate.F
MITgcm-checkpoint68i/pkg/cal/cal_getdate.F
MITgcm-checkpoint68i/pkg/cal/cal_getmonthsrec.F
MITgcm-checkpoint68i/pkg/cal/cal_init_fixed.F
MITgcm-checkpoint68i/pkg/cal/cal_intdays.F
MITgcm-checkpoint68i/pkg/cal/cal_intmonths.F
MITgcm-checkpoint68i/pkg/cal/cal_intyears.F
MITgcm-checkpoint68i/pkg/cal/cal_isleap.F
MITgcm-checkpoint68i/pkg/cal/cal_monthsforyear.F
MITgcm-checkpoint68i/pkg/cal/cal_monthsperyear.F
MITgcm-checkpoint68i/pkg/cal/cal_numints.F
MITgcm-checkpoint68i/pkg/cal/cal_printdate.F
MITgcm-checkpoint68i/pkg/cal/cal_printerror.F
MITgcm-checkpoint68i/pkg/cal/cal_readparms.F
MITgcm-checkpoint68i/pkg/cal/cal_set.F
MITgcm-checkpoint68i/pkg/cal/cal_stepsforday.F
MITgcm-checkpoint68i/pkg/cal/cal_stepsperday.F
MITgcm-checkpoint68i/pkg/cal/cal_subdates.F
MITgcm-checkpoint68i/pkg/cal/cal_summary.F
MITgcm-checkpoint68i/pkg/cal/cal_time2dump.F
MITgcm-checkpoint68i/pkg/cal/cal_timeinterval.F
MITgcm-checkpoint68i/pkg/cal/cal_timepassed.F
MITgcm-checkpoint68i/pkg/cal/cal_timestamp.F
MITgcm-checkpoint68i/pkg/cal/cal_toseconds.F
MITgcm-checkpoint68i/pkg/cal/cal_weekday.F
MITgcm-checkpoint68i/pkg/cd_code/
MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_OPTIONS.h
MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_VARS.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad.flow
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_diff.list
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ini_vars.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_init_fixed.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_read_pickup.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_scheme.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_write_pickup.F
MITgcm-checkpoint68i/pkg/cfc/
MITgcm-checkpoint68i/pkg/cfc/CFC.h
MITgcm-checkpoint68i/pkg/cfc/CFC_ATMOS.h
MITgcm-checkpoint68i/pkg/cfc/CFC_SIZE.h
MITgcm-checkpoint68i/pkg/cfc/cfc11_forcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc11_surfforcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc12_forcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc12_surfforcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_diff.list
MITgcm-checkpoint68i/pkg/cfc/cfc_atmos.F
MITgcm-checkpoint68i/pkg/cfc/cfc_check.F
MITgcm-checkpoint68i/pkg/cfc/cfc_fields_load.F
MITgcm-checkpoint68i/pkg/cfc/cfc_param.F
MITgcm-checkpoint68i/pkg/cfc/cfc_readparms.F
MITgcm-checkpoint68i/pkg/cfc/cfc_tr_register.F
MITgcm-checkpoint68i/pkg/cheapaml/
MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML.h
MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML_OPTIONS.h
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_calc_rhs.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_coare3_flux.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_copy_edges.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_diagnostics_init.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_fields_load.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_fixed.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_varia.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_lanl_flux.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_read_pickup.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_readparms.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_seaice.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_timestep.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_write_pickup.F
MITgcm-checkpoint68i/pkg/chronos/
MITgcm-checkpoint68i/pkg/chronos/chronos.F
MITgcm-checkpoint68i/pkg/chronos/chronos.h
MITgcm-checkpoint68i/pkg/compon_communic/
MITgcm-checkpoint68i/pkg/compon_communic/CPLR_SIG.h
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/generate_tag.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_init.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_tile_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_init.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_tile_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_all_check.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2dbl.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2int.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2real.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_dbl2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init1.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2a.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2b.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_initcomp.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_int2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_match_comp.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_real2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_sortranks.F
MITgcm-checkpoint68i/pkg/cost/
MITgcm-checkpoint68i/pkg/cost/COST_OPTIONS.h
MITgcm-checkpoint68i/pkg/cost/adcost.h
MITgcm-checkpoint68i/pkg/cost/cost.h
MITgcm-checkpoint68i/pkg/cost/cost_accumulate_mean.F
MITgcm-checkpoint68i/pkg/cost/cost_ad.flow
MITgcm-checkpoint68i/pkg/cost/cost_ad_diff.list
MITgcm-checkpoint68i/pkg/cost/cost_atlantic_heat.F
MITgcm-checkpoint68i/pkg/cost/cost_check.F
MITgcm-checkpoint68i/pkg/cost/cost_dependent_init.F
MITgcm-checkpoint68i/pkg/cost/cost_depth.F
MITgcm-checkpoint68i/pkg/cost/cost_final.F
MITgcm-checkpoint68i/pkg/cost/cost_final_restore.F
MITgcm-checkpoint68i/pkg/cost/cost_final_store.F
MITgcm-checkpoint68i/pkg/cost/cost_init_varia.F
MITgcm-checkpoint68i/pkg/cost/cost_readparms.F
MITgcm-checkpoint68i/pkg/cost/cost_state_final.F
MITgcm-checkpoint68i/pkg/cost/cost_test.F
MITgcm-checkpoint68i/pkg/cost/cost_tile.F
MITgcm-checkpoint68i/pkg/cost/cost_tracer.F
MITgcm-checkpoint68i/pkg/cost/cost_vector.F
MITgcm-checkpoint68i/pkg/cost/g_cost.h
MITgcm-checkpoint68i/pkg/ctrl/
MITgcm-checkpoint68i/pkg/ctrl/CTRL_FIELDS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_GENARR.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_OBCS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_OPTIONS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_SIZE.h
MITgcm-checkpoint68i/pkg/ctrl/adctrl_bound.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_diff.list
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.flow
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound_tl.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_check.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_driver.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_depth_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_description.tex
MITgcm-checkpoint68i/pkg/ctrl/ctrl_dummy.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen_rec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_mask.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcse.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsn.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcss.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsw.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getrec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_hfacc_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_ctrlvar.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_obcs_variables.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_rec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_variables.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_wet.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_local_params.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_forcing.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_genarr.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_gentim2d.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_ecco.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_genarr.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gentim2d.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_pack.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_readparms.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_fname.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_smooth.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_summary.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_swapffields.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_toolbox.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_unpack.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_weights.h
MITgcm-checkpoint68i/pkg/ctrl/optim.h
MITgcm-checkpoint68i/pkg/ctrl/optim_readparms.F
MITgcm-checkpoint68i/pkg/debug/
MITgcm-checkpoint68i/pkg/debug/DEBUG_OPTIONS.h
MITgcm-checkpoint68i/pkg/debug/chksum_tiled.F
MITgcm-checkpoint68i/pkg/debug/debug_ad.flow
MITgcm-checkpoint68i/pkg/debug/debug_call.F
MITgcm-checkpoint68i/pkg/debug/debug_cs_corner_uv.F
MITgcm-checkpoint68i/pkg/debug/debug_enter.F
MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rl.F
MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rs.F
MITgcm-checkpoint68i/pkg/debug/debug_leave.F
MITgcm-checkpoint68i/pkg/debug/debug_msg.F
MITgcm-checkpoint68i/pkg/debug/debug_stats_rl.F
MITgcm-checkpoint68i/pkg/debug/debug_stats_rs.F
MITgcm-checkpoint68i/pkg/debug/fill_in_corners_rl.F
MITgcm-checkpoint68i/pkg/debug/write_fullarray_rl.F
MITgcm-checkpoint68i/pkg/debug/write_fullarray_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_CALC.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGSTATS_REGIONS.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAG_OPTIONS.h
MITgcm-checkpoint68i/pkg/diagnostics/diag_calc_psivel.F
MITgcm-checkpoint68i/pkg/diagnostics/diag_cg2d.F
MITgcm-checkpoint68i/pkg/diagnostics/diag_vegtile_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad.flow
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad_diff.list
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_addtolist.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_calc_phivel.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_check.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_clear.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_field.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_state.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fract_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ini_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_early.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_fixed.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_varia.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_p2p.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_vert.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_is_on.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_list_check.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_main_init.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_mnc_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_read_pickup.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_readparms.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_levels.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_pointers.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_setdiag.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_status_error.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_sum_levels.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_summary.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_switch_onoff.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_utils.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_adj.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_pickup.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ascii_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_clear.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_close_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_global.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ini_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_local.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_mnc_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_others_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_output.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_pointers.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_regions.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_setdiag.F
MITgcm-checkpoint68i/pkg/dic/
MITgcm-checkpoint68i/pkg/dic/DIC_ATMOS.h
MITgcm-checkpoint68i/pkg/dic/DIC_COST.h
MITgcm-checkpoint68i/pkg/dic/DIC_CTRL.h
MITgcm-checkpoint68i/pkg/dic/DIC_LOAD.h
MITgcm-checkpoint68i/pkg/dic/DIC_OPTIONS.h
MITgcm-checkpoint68i/pkg/dic/DIC_VARS.h
MITgcm-checkpoint68i/pkg/dic/alk_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/bio_export.F
MITgcm-checkpoint68i/pkg/dic/calcite_saturation.F
MITgcm-checkpoint68i/pkg/dic/car_flux.F
MITgcm-checkpoint68i/pkg/dic/car_flux_omega_top.F
MITgcm-checkpoint68i/pkg/dic/carbon_chem.F
MITgcm-checkpoint68i/pkg/dic/dic_ad.flow
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_diff.list
MITgcm-checkpoint68i/pkg/dic/dic_atmos.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_diags.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_forcing.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_init.F
MITgcm-checkpoint68i/pkg/dic/dic_cost.F
MITgcm-checkpoint68i/pkg/dic/dic_diagnostics_init.F
MITgcm-checkpoint68i/pkg/dic/dic_fields_load.F
MITgcm-checkpoint68i/pkg/dic/dic_fields_update.F
MITgcm-checkpoint68i/pkg/dic/dic_ini_atmos.F
MITgcm-checkpoint68i/pkg/dic/dic_ini_forcing.F
MITgcm-checkpoint68i/pkg/dic/dic_init_fixed.F
MITgcm-checkpoint68i/pkg/dic/dic_init_varia.F
MITgcm-checkpoint68i/pkg/dic/dic_mnc_init.F
MITgcm-checkpoint68i/pkg/dic/dic_read_co2_pickup.F
MITgcm-checkpoint68i/pkg/dic/dic_read_pickup.F
MITgcm-checkpoint68i/pkg/dic/dic_readparms.F
MITgcm-checkpoint68i/pkg/dic/dic_set_control.F
MITgcm-checkpoint68i/pkg/dic/dic_solvesaphe.F
MITgcm-checkpoint68i/pkg/dic/dic_store_fluxco2.F
MITgcm-checkpoint68i/pkg/dic/dic_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/dic_surfforcing_init.F
MITgcm-checkpoint68i/pkg/dic/dic_tr_register.F
MITgcm-checkpoint68i/pkg/dic/dic_write_pickup.F
MITgcm-checkpoint68i/pkg/dic/fe_chem.F
MITgcm-checkpoint68i/pkg/dic/insol.F
MITgcm-checkpoint68i/pkg/dic/o2_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/phos_flux.F
MITgcm-checkpoint68i/pkg/down_slope/
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_OPTIONS.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_PARAMS.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_SIZE.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_VARS.h
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_ad_diff.list
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_apply.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_flow.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_rho.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_diagnostics_init.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_fixed.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_varia.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_readparms.F
MITgcm-checkpoint68i/pkg/ebm/
MITgcm-checkpoint68i/pkg/ebm/EBM.h
MITgcm-checkpoint68i/pkg/ebm/EBM_OPTIONS.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_diff.list
MITgcm-checkpoint68i/pkg/ebm/ebm_area_t.F
MITgcm-checkpoint68i/pkg/ebm/ebm_atmosphere.F
MITgcm-checkpoint68i/pkg/ebm/ebm_driver.F
MITgcm-checkpoint68i/pkg/ebm/ebm_ini_vars.F
MITgcm-checkpoint68i/pkg/ebm/ebm_load_climatology.F
MITgcm-checkpoint68i/pkg/ebm/ebm_readparms.F
MITgcm-checkpoint68i/pkg/ebm/ebm_wind_perturb.F
MITgcm-checkpoint68i/pkg/ebm/ebm_zonalmean.F
MITgcm-checkpoint68i/pkg/ecco/
MITgcm-checkpoint68i/pkg/ecco/ECCO.h
MITgcm-checkpoint68i/pkg/ecco/ECCO_OPTIONS.h
MITgcm-checkpoint68i/pkg/ecco/ECCO_SIZE.h
MITgcm-checkpoint68i/pkg/ecco/cost_averagesfields.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesflags.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesgeneric.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesinit.F
MITgcm-checkpoint68i/pkg/ecco/cost_bp_read.F
MITgcm-checkpoint68i/pkg/ecco/cost_forcing.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencal.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_all.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_assignperiod.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_boxmean.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_bpv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_customize.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_glbmean.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_moc.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_seaicev4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sshv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sstv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_transp.F
MITgcm-checkpoint68i/pkg/ecco/cost_generic.F
MITgcm-checkpoint68i/pkg/ecco/cost_genread.F
MITgcm-checkpoint68i/pkg/ecco/cost_hyd.F
MITgcm-checkpoint68i/pkg/ecco/cost_internal_params.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcs.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcs_ageos.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcse.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsn.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcss.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsvol.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsw.F
MITgcm-checkpoint68i/pkg/ecco/cost_sla_read.F
MITgcm-checkpoint68i/pkg/ecco/cost_sla_read_yd.F
MITgcm-checkpoint68i/pkg/ecco/cost_ssh.F
MITgcm-checkpoint68i/pkg/ecco/ecco_ad.flow
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_diff.list
MITgcm-checkpoint68i/pkg/ecco/ecco_check.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost.h
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_driver.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_final.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_barfiles.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_fixed.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_varia.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_summary.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_weights.F
MITgcm-checkpoint68i/pkg/ecco/ecco_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ecco/ecco_init_fixed.F
MITgcm-checkpoint68i/pkg/ecco/ecco_init_varia.F
MITgcm-checkpoint68i/pkg/ecco/ecco_local_params.h
MITgcm-checkpoint68i/pkg/ecco/ecco_phys.F
MITgcm-checkpoint68i/pkg/ecco/ecco_readparms.F
MITgcm-checkpoint68i/pkg/ecco/ecco_summary.F
MITgcm-checkpoint68i/pkg/ecco/ecco_toolbox.F
MITgcm-checkpoint68i/pkg/ecco/stergloh_output.F
MITgcm-checkpoint68i/pkg/embed_files/
MITgcm-checkpoint68i/pkg/embed_files/EMBED_FILES_OPTIONS.h
MITgcm-checkpoint68i/pkg/embed_files/README.txt
MITgcm-checkpoint68i/pkg/embed_files/decode_files.c
MITgcm-checkpoint68i/pkg/embed_files/embed_files_init.F
MITgcm-checkpoint68i/pkg/exch2/
MITgcm-checkpoint68i/pkg/exch2/Makefile
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_BUFFER.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_PARAMS.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_SIZE.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_TOPOLOGY.h
MITgcm-checkpoint68i/pkg/exch2/W2_OPTIONS.h
MITgcm-checkpoint68i/pkg/exch2/exch2.flow
MITgcm-checkpoint68i/pkg/exch2/exch2_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_diff.list
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_check_depths.F
MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_get_scal_bounds.F
MITgcm-checkpoint68i/pkg/exch2/exch2_get_uv_bounds.F
MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube_ad.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube_ad.template
MITgcm-checkpoint68i/pkg/exch2/exch2_s3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_sm_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_agrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_bgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_cgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_dgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_z_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/w2_cumulsum_z_tile.F
MITgcm-checkpoint68i/pkg/exch2/w2_e2setup.F
MITgcm-checkpoint68i/pkg/exch2/w2_eeboot.F
MITgcm-checkpoint68i/pkg/exch2/w2_map_procs.F
MITgcm-checkpoint68i/pkg/exch2/w2_print_comm_sequence.F
MITgcm-checkpoint68i/pkg/exch2/w2_print_e2setup.F
MITgcm-checkpoint68i/pkg/exch2/w2_readparms.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_cs6_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_f2f_index.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_gen_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_map_cumsum.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_map_tiles.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_myown_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_single_facet.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_tile2tiles.F
MITgcm-checkpoint68i/pkg/exf/
MITgcm-checkpoint68i/pkg/exf/EXF_CONSTANTS.h
MITgcm-checkpoint68i/pkg/exf/EXF_FIELDS.h
MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_PARAM.h
MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_SIZE.h
MITgcm-checkpoint68i/pkg/exf/EXF_OPTIONS.h
MITgcm-checkpoint68i/pkg/exf/EXF_PARAM.h
MITgcm-checkpoint68i/pkg/exf/TODO.txt
MITgcm-checkpoint68i/pkg/exf/exf_ad.flow
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_diff.list
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots.F
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots__g.F
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots_ad.F
MITgcm-checkpoint68i/pkg/exf/exf_bulkformulae.F
MITgcm-checkpoint68i/pkg/exf/exf_check.F
MITgcm-checkpoint68i/pkg/exf/exf_check_range.F
MITgcm-checkpoint68i/pkg/exf/exf_description.tex
MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_init.F
MITgcm-checkpoint68i/pkg/exf/exf_filter_rl.F
MITgcm-checkpoint68i/pkg/exf/exf_getclim.F
MITgcm-checkpoint68i/pkg/exf/exf_getffield_start.F
MITgcm-checkpoint68i/pkg/exf/exf_getffieldrec.F
MITgcm-checkpoint68i/pkg/exf/exf_getffields.F
MITgcm-checkpoint68i/pkg/exf/exf_getfield_start.F
MITgcm-checkpoint68i/pkg/exf/exf_getforcing.F
MITgcm-checkpoint68i/pkg/exf/exf_getmonthsrec.F
MITgcm-checkpoint68i/pkg/exf/exf_getsurfacefluxes.F
MITgcm-checkpoint68i/pkg/exf/exf_getyearlyfieldname.F
MITgcm-checkpoint68i/pkg/exf/exf_init_fixed.F
MITgcm-checkpoint68i/pkg/exf/exf_init_fld.F
MITgcm-checkpoint68i/pkg/exf/exf_init_interp.F
MITgcm-checkpoint68i/pkg/exf/exf_init_varia.F
MITgcm-checkpoint68i/pkg/exf/exf_interp.F
MITgcm-checkpoint68i/pkg/exf/exf_interp_read.F
MITgcm-checkpoint68i/pkg/exf/exf_interp_uv.F
MITgcm-checkpoint68i/pkg/exf/exf_interpolate.F
MITgcm-checkpoint68i/pkg/exf/exf_mapfields.F
MITgcm-checkpoint68i/pkg/exf/exf_monitor.F
MITgcm-checkpoint68i/pkg/exf/exf_monitor_ad.F
MITgcm-checkpoint68i/pkg/exf/exf_radiation.F
MITgcm-checkpoint68i/pkg/exf/exf_readparms.F
MITgcm-checkpoint68i/pkg/exf/exf_set_fld.F
MITgcm-checkpoint68i/pkg/exf/exf_set_gen.F
MITgcm-checkpoint68i/pkg/exf/exf_set_obcs.F
MITgcm-checkpoint68i/pkg/exf/exf_set_uv.F
MITgcm-checkpoint68i/pkg/exf/exf_summary.F
MITgcm-checkpoint68i/pkg/exf/exf_swapffields.F
MITgcm-checkpoint68i/pkg/exf/exf_weight_sfx_diags.F
MITgcm-checkpoint68i/pkg/exf/exf_wind.F
MITgcm-checkpoint68i/pkg/exf/exf_zenithangle.F
MITgcm-checkpoint68i/pkg/exf/exf_zenithangle_table.F
MITgcm-checkpoint68i/pkg/fizhi/
MITgcm-checkpoint68i/pkg/fizhi/AtoC.F
MITgcm-checkpoint68i/pkg/fizhi/CtoA.F
MITgcm-checkpoint68i/pkg/fizhi/FIZHI_OPTIONS.h
MITgcm-checkpoint68i/pkg/fizhi/cah-dat.h
MITgcm-checkpoint68i/pkg/fizhi/cai-dat.h
MITgcm-checkpoint68i/pkg/fizhi/chronos.h
MITgcm-checkpoint68i/pkg/fizhi/co2-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/do_fizhi.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_SHP.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_SIZE.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_alarms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_chemistry_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_clockstuff.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagalarms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagnostics_init.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_driver.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_earth_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_fillnegs.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_gwdrag.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_chem.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_fixed.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vars.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_veg.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vegsurftiles.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_io_comms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_SIZE.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_lsm.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_lwrad.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_mnc_init.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_moist.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_mpistuff.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_ocean_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_rayleigh.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_read_pickup.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_readparms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_readwrite_vegtiles.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_step_diag.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_swrad.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_tendency_apply.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_turb.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_update_time.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_utils.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_wrapper.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_datetime.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_pickup.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_state.F
MITgcm-checkpoint68i/pkg/fizhi/getcon.F
MITgcm-checkpoint68i/pkg/fizhi/getpwhere.F
MITgcm-checkpoint68i/pkg/fizhi/h2o-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/o3-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/sibber.h
MITgcm-checkpoint68i/pkg/fizhi/slprs.F
MITgcm-checkpoint68i/pkg/fizhi/snwmid.h
MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_corr.F
MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_fg.F
MITgcm-checkpoint68i/pkg/fizhi/step_physics.F
MITgcm-checkpoint68i/pkg/fizhi/update_chemistry_exports.F
MITgcm-checkpoint68i/pkg/fizhi/update_earth_exports.F
MITgcm-checkpoint68i/pkg/fizhi/update_ocean_exports.F
MITgcm-checkpoint68i/pkg/flt/
MITgcm-checkpoint68i/pkg/flt/FLT.h
MITgcm-checkpoint68i/pkg/flt/FLT_BUFF.h
MITgcm-checkpoint68i/pkg/flt/FLT_OPTIONS.h
MITgcm-checkpoint68i/pkg/flt/FLT_SIZE.h
MITgcm-checkpoint68i/pkg/flt/README.flt
MITgcm-checkpoint68i/pkg/flt/exch2_recv_get_vec.F
MITgcm-checkpoint68i/pkg/flt/exch2_send_put_vec.F
MITgcm-checkpoint68i/pkg/flt/exch_recv_get_vec.F
MITgcm-checkpoint68i/pkg/flt/exch_send_put_vec.F
MITgcm-checkpoint68i/pkg/flt/flt_down.F
MITgcm-checkpoint68i/pkg/flt/flt_exch2.F
MITgcm-checkpoint68i/pkg/flt/flt_exchg.F
MITgcm-checkpoint68i/pkg/flt/flt_init_fixed.F
MITgcm-checkpoint68i/pkg/flt/flt_init_varia.F
MITgcm-checkpoint68i/pkg/flt/flt_interp_linear.F
MITgcm-checkpoint68i/pkg/flt/flt_main.F
MITgcm-checkpoint68i/pkg/flt/flt_mapping.F
MITgcm-checkpoint68i/pkg/flt/flt_readparms.F
MITgcm-checkpoint68i/pkg/flt/flt_runga2.F
MITgcm-checkpoint68i/pkg/flt/flt_runga4.F
MITgcm-checkpoint68i/pkg/flt/flt_traj.F
MITgcm-checkpoint68i/pkg/flt/flt_up.F
MITgcm-checkpoint68i/pkg/flt/flt_write_pickup.F
MITgcm-checkpoint68i/pkg/frazil/
MITgcm-checkpoint68i/pkg/frazil/FRAZIL.h
MITgcm-checkpoint68i/pkg/frazil/FRAZIL_OPTIONS.h
MITgcm-checkpoint68i/pkg/frazil/frazil_ad.flow
MITgcm-checkpoint68i/pkg/frazil/frazil_ad_diff.list
MITgcm-checkpoint68i/pkg/frazil/frazil_calc_rhs.F
MITgcm-checkpoint68i/pkg/frazil/frazil_description.tex
MITgcm-checkpoint68i/pkg/frazil/frazil_diagnostics_init.F
MITgcm-checkpoint68i/pkg/frazil/frazil_init_fixed.F
MITgcm-checkpoint68i/pkg/frazil/frazil_init_varia.F
MITgcm-checkpoint68i/pkg/frazil/frazil_tendency_apply.F
MITgcm-checkpoint68i/pkg/gchem/
MITgcm-checkpoint68i/pkg/gchem/GCHEM.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_FIELDS.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_OPTIONS.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_SIZE.h
MITgcm-checkpoint68i/pkg/gchem/gchem_ad_diff.list
MITgcm-checkpoint68i/pkg/gchem/gchem_add_tendency.F
MITgcm-checkpoint68i/pkg/gchem/gchem_calc_tendency.F
MITgcm-checkpoint68i/pkg/gchem/gchem_check.F
MITgcm-checkpoint68i/pkg/gchem/gchem_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gchem/gchem_fields_load.F
MITgcm-checkpoint68i/pkg/gchem/gchem_forcing_sep.F
MITgcm-checkpoint68i/pkg/gchem/gchem_init_fixed.F
MITgcm-checkpoint68i/pkg/gchem/gchem_init_vari.F
MITgcm-checkpoint68i/pkg/gchem/gchem_output.F
MITgcm-checkpoint68i/pkg/gchem/gchem_readparms.F
MITgcm-checkpoint68i/pkg/gchem/gchem_surfmean.F
MITgcm-checkpoint68i/pkg/gchem/gchem_tr_register.F
MITgcm-checkpoint68i/pkg/gchem/gchem_write_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_FLUX_LIMITER.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_OPTIONS.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_SOM_VARS.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_diff.list
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advection.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advscheme.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_calc_rhs.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_check.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_del2.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_init.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_state.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_exch_som.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_implicit_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_fixed.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_varia.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_plm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_read_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_advect.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_exchanges.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_fill_cs_corner.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_lim_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_prep_cs_corner.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3c4_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_write_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/generic_advdiff.tex
MITgcm-checkpoint68i/pkg/generic_advdiff/salt_fill.F
MITgcm-checkpoint68i/pkg/ggl90/
MITgcm-checkpoint68i/pkg/ggl90/GGL90.h
MITgcm-checkpoint68i/pkg/ggl90/GGL90_OPTIONS.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_diff.list
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_diff.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_visc.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_check.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_exchanges.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_idemix.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_fixed.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_varia.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_output.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_read_pickup.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_readparms.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_write_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/
MITgcm-checkpoint68i/pkg/gmredi/GMREDI.h
MITgcm-checkpoint68i/pkg/gmredi/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/pkg/gmredi/GMREDI_TAVE.h
MITgcm-checkpoint68i/pkg/gmredi/README_ADJOINT
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad.flow
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad_diff.list
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_bates_k.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_diff.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_eigs.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_b.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_bvp.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_qgleith.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_tensor.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_urms.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_check.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_description.tex
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_impl.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_do_exch.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_fixed.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_varia.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_mnc_init.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_output.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_read_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_readparms.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_residual_flow.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_rtransport.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_limit.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_psi.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_write_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_xtransport.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ytransport.F
MITgcm-checkpoint68i/pkg/gmredi/submeso_calc_psi.F
MITgcm-checkpoint68i/pkg/grdchk/
MITgcm-checkpoint68i/pkg/grdchk/GRDCHK_OPTIONS.h
MITgcm-checkpoint68i/pkg/grdchk/grdchk.h
MITgcm-checkpoint68i/pkg/grdchk/grdchk_check.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_description.tex
MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_obcs_mask.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_position.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_getadxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_getxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_init.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_loc.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_main.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_print.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_readparms.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_setxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_summary.F
MITgcm-checkpoint68i/pkg/gridalt/
MITgcm-checkpoint68i/pkg/gridalt/GRIDALT_OPTIONS.h
MITgcm-checkpoint68i/pkg/gridalt/dyn2phys.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_initialise.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_mapping.h
MITgcm-checkpoint68i/pkg/gridalt/gridalt_update.F
MITgcm-checkpoint68i/pkg/gridalt/make_phys_grid.F
MITgcm-checkpoint68i/pkg/gridalt/phys2dyn.F
MITgcm-checkpoint68i/pkg/icefront/
MITgcm-checkpoint68i/pkg/icefront/ICEFRONT.h
MITgcm-checkpoint68i/pkg/icefront/ICEFRONT_OPTIONS.h
MITgcm-checkpoint68i/pkg/icefront/ICFSymbol.txt
MITgcm-checkpoint68i/pkg/icefront/icefront_check.F
MITgcm-checkpoint68i/pkg/icefront/icefront_description.tex
MITgcm-checkpoint68i/pkg/icefront/icefront_diagnostics_init.F
MITgcm-checkpoint68i/pkg/icefront/icefront_init_fixed.F
MITgcm-checkpoint68i/pkg/icefront/icefront_init_varia.F
MITgcm-checkpoint68i/pkg/icefront/icefront_readparms.F
MITgcm-checkpoint68i/pkg/icefront/icefront_tendency_apply.F
MITgcm-checkpoint68i/pkg/icefront/icefront_thermodynamics.F
MITgcm-checkpoint68i/pkg/kl10/
MITgcm-checkpoint68i/pkg/kl10/KL10.h
MITgcm-checkpoint68i/pkg/kl10/KL10_DIAGS.h
MITgcm-checkpoint68i/pkg/kl10/KL10_OPTIONS.h
MITgcm-checkpoint68i/pkg/kl10/KL10_TAVE.h
MITgcm-checkpoint68i/pkg/kl10/kl10_calc.F
MITgcm-checkpoint68i/pkg/kl10/kl10_calc_diff.F
MITgcm-checkpoint68i/pkg/kl10/kl10_calc_visc.F
MITgcm-checkpoint68i/pkg/kl10/kl10_check.F
MITgcm-checkpoint68i/pkg/kl10/kl10_diagnostics_init.F
MITgcm-checkpoint68i/pkg/kl10/kl10_init_fixed.F
MITgcm-checkpoint68i/pkg/kl10/kl10_init_varia.F
MITgcm-checkpoint68i/pkg/kl10/kl10_output.F
MITgcm-checkpoint68i/pkg/kl10/kl10_readparms.F
MITgcm-checkpoint68i/pkg/kpp/
MITgcm-checkpoint68i/pkg/kpp/KPP.h
MITgcm-checkpoint68i/pkg/kpp/KPP_OPTIONS.h
MITgcm-checkpoint68i/pkg/kpp/KPP_PARAMS.h
MITgcm-checkpoint68i/pkg/kpp/KPP_TAVE.h
MITgcm-checkpoint68i/pkg/kpp/kpp_ad_diff.list
MITgcm-checkpoint68i/pkg/kpp/kpp_calc.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_ptr.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_s.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_t.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_visc.F
MITgcm-checkpoint68i/pkg/kpp/kpp_check.F
MITgcm-checkpoint68i/pkg/kpp/kpp_description.tex
MITgcm-checkpoint68i/pkg/kpp/kpp_diagnostics_init.F
MITgcm-checkpoint68i/pkg/kpp/kpp_do_exch.F
MITgcm-checkpoint68i/pkg/kpp/kpp_forcing_surf.F
MITgcm-checkpoint68i/pkg/kpp/kpp_init_fixed.F
MITgcm-checkpoint68i/pkg/kpp/kpp_init_varia.F
MITgcm-checkpoint68i/pkg/kpp/kpp_output.F
MITgcm-checkpoint68i/pkg/kpp/kpp_readparms.F
MITgcm-checkpoint68i/pkg/kpp/kpp_routines.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_ptr.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_s.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_t.F
MITgcm-checkpoint68i/pkg/land/
MITgcm-checkpoint68i/pkg/land/LAND_OPTIONS.h
MITgcm-checkpoint68i/pkg/land/LAND_PARAMS.h
MITgcm-checkpoint68i/pkg/land/LAND_SIZE.h
MITgcm-checkpoint68i/pkg/land/LAND_TAVE.h
MITgcm-checkpoint68i/pkg/land/LAND_VARS.h
MITgcm-checkpoint68i/pkg/land/land_albedo.F
MITgcm-checkpoint68i/pkg/land/land_check.F
MITgcm-checkpoint68i/pkg/land/land_diagnostics_init.F
MITgcm-checkpoint68i/pkg/land/land_diagnostics_state.F
MITgcm-checkpoint68i/pkg/land/land_do_diags.F
MITgcm-checkpoint68i/pkg/land/land_impl_temp.F
MITgcm-checkpoint68i/pkg/land/land_ini_vars.F
MITgcm-checkpoint68i/pkg/land/land_init_fixed.F
MITgcm-checkpoint68i/pkg/land/land_mnc_init.F
MITgcm-checkpoint68i/pkg/land/land_monitor.F
MITgcm-checkpoint68i/pkg/land/land_output.F
MITgcm-checkpoint68i/pkg/land/land_read_pickup.F
MITgcm-checkpoint68i/pkg/land/land_readparms.F
MITgcm-checkpoint68i/pkg/land/land_stepfwd.F
MITgcm-checkpoint68i/pkg/land/land_write_pickup.F
MITgcm-checkpoint68i/pkg/layers/
MITgcm-checkpoint68i/pkg/layers/LAYERS.h
MITgcm-checkpoint68i/pkg/layers/LAYERS_OPTIONS.h
MITgcm-checkpoint68i/pkg/layers/LAYERS_SIZE.h
MITgcm-checkpoint68i/pkg/layers/layers_ad_diff.list
MITgcm-checkpoint68i/pkg/layers/layers_calc.F
MITgcm-checkpoint68i/pkg/layers/layers_check.F
MITgcm-checkpoint68i/pkg/layers/layers_diagnostics_init.F
MITgcm-checkpoint68i/pkg/layers/layers_fluxcalc.F
MITgcm-checkpoint68i/pkg/layers/layers_init_fixed.F
MITgcm-checkpoint68i/pkg/layers/layers_init_varia.F
MITgcm-checkpoint68i/pkg/layers/layers_mnc_init.F
MITgcm-checkpoint68i/pkg/layers/layers_output.F
MITgcm-checkpoint68i/pkg/layers/layers_readparms.F
MITgcm-checkpoint68i/pkg/layers/layers_save.F
MITgcm-checkpoint68i/pkg/layers/layers_thermodynamics.F
MITgcm-checkpoint68i/pkg/layers/layers_wsurf_tr.F
MITgcm-checkpoint68i/pkg/longstep/
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP.h
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_OPTIONS.h
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_PARAMS.h
MITgcm-checkpoint68i/pkg/longstep/README
MITgcm-checkpoint68i/pkg/longstep/longstep_average.F
MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d_fac.F
MITgcm-checkpoint68i/pkg/longstep/longstep_check_iters.F
MITgcm-checkpoint68i/pkg/longstep/longstep_correction_step.F
MITgcm-checkpoint68i/pkg/longstep/longstep_diagnostics_init.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_fac.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_rs.F
MITgcm-checkpoint68i/pkg/longstep/longstep_forcing_surf.F
MITgcm-checkpoint68i/pkg/longstep/longstep_init_fixed.F
MITgcm-checkpoint68i/pkg/longstep/longstep_init_varia.F
MITgcm-checkpoint68i/pkg/longstep/longstep_readparms.F
MITgcm-checkpoint68i/pkg/longstep/longstep_reset_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_thermodynamics.F
MITgcm-checkpoint68i/pkg/matrix/
MITgcm-checkpoint68i/pkg/matrix/MATRIX.h
MITgcm-checkpoint68i/pkg/matrix/MATRIX_OPTIONS.h
MITgcm-checkpoint68i/pkg/matrix/matrix_init_varia.F
MITgcm-checkpoint68i/pkg/matrix/matrix_output.F
MITgcm-checkpoint68i/pkg/matrix/matrix_readparms.F
MITgcm-checkpoint68i/pkg/matrix/matrix_store_tendency.F
MITgcm-checkpoint68i/pkg/matrix/matrix_write_grid.F
MITgcm-checkpoint68i/pkg/matrix/matrix_write_tendency.F
MITgcm-checkpoint68i/pkg/mdsio/
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_3D.h
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_WH.h
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_OPTIONS.h
MITgcm-checkpoint68i/pkg/mdsio/mdsio_ad.flow
MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertorl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_check4file.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_facef_read.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl_slice.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rs.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_meta.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_section.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_tape.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_whalos.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_readvec_loc.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_slice.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_segxtorx_2d.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_metafiles.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rs.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_meta.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_section.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_tape.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_whalos.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_writelocal.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_writevec_loc.F
MITgcm-checkpoint68i/pkg/mnc/
MITgcm-checkpoint68i/pkg/mnc/CPP_OPTIONS.t
MITgcm-checkpoint68i/pkg/mnc/MNC_BUFF.h
MITgcm-checkpoint68i/pkg/mnc/MNC_COMMON.h
MITgcm-checkpoint68i/pkg/mnc/MNC_OPTIONS.h
MITgcm-checkpoint68i/pkg/mnc/MNC_PARAMS.h
MITgcm-checkpoint68i/pkg/mnc/MNC_SIZE.h
MITgcm-checkpoint68i/pkg/mnc/Makefile
MITgcm-checkpoint68i/pkg/mnc/PACKAGES_CONFIG.t
MITgcm-checkpoint68i/pkg/mnc/README.txt
MITgcm-checkpoint68i/pkg/mnc/SIZE.t
MITgcm-checkpoint68i/pkg/mnc/TESTING_README.txt
MITgcm-checkpoint68i/pkg/mnc/build_netcdf_stubs
MITgcm-checkpoint68i/pkg/mnc/mnc_ad.flow
MITgcm-checkpoint68i/pkg/mnc/mnc_create_dir.c
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_citer.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_cvars.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_fsize.c
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_init.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_missingvals.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_model_attr.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_readwrite.template
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_udim.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_write_grid_info.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cwrapper.F
MITgcm-checkpoint68i/pkg/mnc/mnc_description.tex
MITgcm-checkpoint68i/pkg/mnc/mnc_dim.F
MITgcm-checkpoint68i/pkg/mnc/mnc_dump.F
MITgcm-checkpoint68i/pkg/mnc/mnc_file.F
MITgcm-checkpoint68i/pkg/mnc/mnc_grid.F
MITgcm-checkpoint68i/pkg/mnc/mnc_init.F
MITgcm-checkpoint68i/pkg/mnc/mnc_readparms.F
MITgcm-checkpoint68i/pkg/mnc/mnc_test_001.T
MITgcm-checkpoint68i/pkg/mnc/mnc_test_002.T
MITgcm-checkpoint68i/pkg/mnc/mnc_test_utils.T
MITgcm-checkpoint68i/pkg/mnc/mnc_update_time.F
MITgcm-checkpoint68i/pkg/mnc/mnc_utils.F
MITgcm-checkpoint68i/pkg/mnc/mnc_var.F
MITgcm-checkpoint68i/pkg/mnc/parse_local_info
MITgcm-checkpoint68i/pkg/mnc/pre-defined_grids.txt
MITgcm-checkpoint68i/pkg/mom_common/
MITgcm-checkpoint68i/pkg/mom_common/MOM_COMMON_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_common/MOM_VISC.h
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_3d_strain.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_absvort3.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hdiv.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hfacz.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_ke.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_relvort3.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_strain.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_tension.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_visc.F
MITgcm-checkpoint68i/pkg/mom_common/mom_common_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_common/mom_diagnostics_init.F
MITgcm-checkpoint68i/pkg/mom_common/mom_hdissip.F
MITgcm-checkpoint68i/pkg/mom_common/mom_init_fixed.F
MITgcm-checkpoint68i/pkg/mom_common/mom_quasihydrostatic.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_botdrag_coeff.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_implicit_r.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_rviscflux.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_uv_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_botdrag_coeff.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_implicit_r.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_rviscflux.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_limit.F
MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_stretch.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_fluxform/
MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM.h
MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_calc_rtrans.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_uu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_vu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_wu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_coriolis.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_del2u.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_cylinder.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_sphere.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_xviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_yviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_uv_boundary.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_uv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_vv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_wv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_coriolis.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_del2v.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_cylinder.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_sphere.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_xviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_yviscflux.F
MITgcm-checkpoint68i/pkg/mom_vecinv/
MITgcm-checkpoint68i/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_del2uv.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_hdissip.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_grad_ke.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_vertshear.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_grad_ke.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_vertshear.F
MITgcm-checkpoint68i/pkg/monitor/
MITgcm-checkpoint68i/pkg/monitor/MONITOR.h
MITgcm-checkpoint68i/pkg/monitor/MONITOR_OPTIONS.h
MITgcm-checkpoint68i/pkg/monitor/mon_advcfl.F
MITgcm-checkpoint68i/pkg/monitor/mon_advcflw.F
MITgcm-checkpoint68i/pkg/monitor/mon_advcflw2.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_advcfl.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_description.tex
MITgcm-checkpoint68i/pkg/monitor/mon_init.F
MITgcm-checkpoint68i/pkg/monitor/mon_ke.F
MITgcm-checkpoint68i/pkg/monitor/mon_out.F
MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_set_iounit.F
MITgcm-checkpoint68i/pkg/monitor/mon_set_pref.F
MITgcm-checkpoint68i/pkg/monitor/mon_solution.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_latbnd_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_surfcor.F
MITgcm-checkpoint68i/pkg/monitor/mon_vort3.F
MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rs.F
MITgcm-checkpoint68i/pkg/monitor/monitor.F
MITgcm-checkpoint68i/pkg/monitor/monitor_ad.F
MITgcm-checkpoint68i/pkg/monitor/monitor_ad.flow
MITgcm-checkpoint68i/pkg/monitor/monitor_description.tex
MITgcm-checkpoint68i/pkg/monitor/monitor_g.F
MITgcm-checkpoint68i/pkg/my82/
MITgcm-checkpoint68i/pkg/my82/MY82.h
MITgcm-checkpoint68i/pkg/my82/MY82_OPTIONS.h
MITgcm-checkpoint68i/pkg/my82/my82_calc.F
MITgcm-checkpoint68i/pkg/my82/my82_calc_diff.F
MITgcm-checkpoint68i/pkg/my82/my82_calc_visc.F
MITgcm-checkpoint68i/pkg/my82/my82_check.F
MITgcm-checkpoint68i/pkg/my82/my82_diagnostics_init.F
MITgcm-checkpoint68i/pkg/my82/my82_init_fixed.F
MITgcm-checkpoint68i/pkg/my82/my82_init_varia.F
MITgcm-checkpoint68i/pkg/my82/my82_output.F
MITgcm-checkpoint68i/pkg/my82/my82_readparms.F
MITgcm-checkpoint68i/pkg/my82/my82_ri_number.F
MITgcm-checkpoint68i/pkg/mypackage/
MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE.h
MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE_OPTIONS.h
MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad.flow
MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad_diff.list
MITgcm-checkpoint68i/pkg/mypackage/mypackage_calc_rhs.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_check.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_description.tex
MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_init.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_state.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_fixed.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_varia.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_mnc_init.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_read_pickup.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_readparms.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_tendency_apply.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_write_pickup.F
MITgcm-checkpoint68i/pkg/obcs/
MITgcm-checkpoint68i/pkg/obcs/OBCS_FIELDS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_GRID.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_OPTIONS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_PARAMS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_PTRACERS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_SEAICE.h
MITgcm-checkpoint68i/pkg/obcs/ORLANSKI.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad.flow
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_diff.list
MITgcm-checkpoint68i/pkg/obcs/obcs_add_tides.F
MITgcm-checkpoint68i/pkg/obcs/obcs_adjust.F
MITgcm-checkpoint68i/pkg/obcs/obcs_adjust_uvice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_eta.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ptracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_r_star.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_seaice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_surf_dr.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ts.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uv.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uvice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_w.F
MITgcm-checkpoint68i/pkg/obcs/obcs_balance_flow.F
MITgcm-checkpoint68i/pkg/obcs/obcs_calc.F
MITgcm-checkpoint68i/pkg/obcs/obcs_calc_stevens.F
MITgcm-checkpoint68i/pkg/obcs/obcs_check.F
MITgcm-checkpoint68i/pkg/obcs/obcs_check_depths.F
MITgcm-checkpoint68i/pkg/obcs/obcs_copy_tracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_copy_uv_n.F
MITgcm-checkpoint68i/pkg/obcs/obcs_description.tex
MITgcm-checkpoint68i/pkg/obcs/obcs_diag_balance.F
MITgcm-checkpoint68i/pkg/obcs/obcs_exchanges.F
MITgcm-checkpoint68i/pkg/obcs/obcs_exf_load.F
MITgcm-checkpoint68i/pkg/obcs/obcs_fields_load.F
MITgcm-checkpoint68i/pkg/obcs/obcs_init_fixed.F
MITgcm-checkpoint68i/pkg/obcs/obcs_init_variables.F
MITgcm-checkpoint68i/pkg/obcs/obcs_mon_stats.F
MITgcm-checkpoint68i/pkg/obcs/obcs_monitor.F
MITgcm-checkpoint68i/pkg/obcs/obcs_output.F
MITgcm-checkpoint68i/pkg/obcs/obcs_prescribe_read.F
MITgcm-checkpoint68i/pkg/obcs/obcs_read_pickup.F
MITgcm-checkpoint68i/pkg/obcs/obcs_readparms.F
MITgcm-checkpoint68i/pkg/obcs/obcs_save_uv_n.F
MITgcm-checkpoint68i/pkg/obcs/obcs_seaice_sponge.F
MITgcm-checkpoint68i/pkg/obcs/obcs_set_connect.F
MITgcm-checkpoint68i/pkg/obcs/obcs_sponge.F
MITgcm-checkpoint68i/pkg/obcs/obcs_u1_adv_tracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_write_pickup.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_east.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_init.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_north.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_south.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_west.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/
MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_PARAMS.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_TAVE.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCNCPL.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCN_CPL_OPTIONS.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_exch_configs.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_export_import_data.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_import_cplparms.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_ini_vars.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init_fixed.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_output.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_readparms.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_register.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_write_pickup.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_apply_import.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_check_cplconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_diags.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_read_pickup.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_data.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_fields.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_ocnconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_atmconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_fields.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_store_my_data.F
MITgcm-checkpoint68i/pkg/offline/
MITgcm-checkpoint68i/pkg/offline/OFFLINE.h
MITgcm-checkpoint68i/pkg/offline/OFFLINE_OPTIONS.h
MITgcm-checkpoint68i/pkg/offline/OFFLINE_SWITCH.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_diff.list
MITgcm-checkpoint68i/pkg/offline/offline_check.F
MITgcm-checkpoint68i/pkg/offline/offline_fields_load.F
MITgcm-checkpoint68i/pkg/offline/offline_get_diffus.F
MITgcm-checkpoint68i/pkg/offline/offline_init_varia.F
MITgcm-checkpoint68i/pkg/offline/offline_readparms.F
MITgcm-checkpoint68i/pkg/offline/offline_reset_parms.F
MITgcm-checkpoint68i/pkg/openad/
MITgcm-checkpoint68i/pkg/openad/OPENAD_OPTIONS.h
MITgcm-checkpoint68i/pkg/openad/ad_s_different_multiple.F
MITgcm-checkpoint68i/pkg/openad/ad_s_ifnblnk.F
MITgcm-checkpoint68i/pkg/openad/ad_s_ilnblnk.F
MITgcm-checkpoint68i/pkg/openad/ad_s_mds_reclen.F
MITgcm-checkpoint68i/pkg/openad/externalDummies.F
MITgcm-checkpoint68i/pkg/openad/findAndDiff.bash
MITgcm-checkpoint68i/pkg/openad/inner_do_loop.F
MITgcm-checkpoint68i/pkg/openad/openad_ad_diff.list
MITgcm-checkpoint68i/pkg/openad/openad_checkpointInit.F
MITgcm-checkpoint68i/pkg/openad/openad_dumpAdjoint.F
MITgcm-checkpoint68i/pkg/openad/seawater.F
MITgcm-checkpoint68i/pkg/openad/the_model_main.F
MITgcm-checkpoint68i/pkg/opps/
MITgcm-checkpoint68i/pkg/opps/OPPS.h
MITgcm-checkpoint68i/pkg/opps/OPPS_OPTIONS.h
MITgcm-checkpoint68i/pkg/opps/opps_calc.F
MITgcm-checkpoint68i/pkg/opps/opps_check.F
MITgcm-checkpoint68i/pkg/opps/opps_init.F
MITgcm-checkpoint68i/pkg/opps/opps_interface.F
MITgcm-checkpoint68i/pkg/opps/opps_readparms.F
MITgcm-checkpoint68i/pkg/pkg_depend
MITgcm-checkpoint68i/pkg/pkg_groups
MITgcm-checkpoint68i/pkg/pp81/
MITgcm-checkpoint68i/pkg/pp81/PP81.h
MITgcm-checkpoint68i/pkg/pp81/PP81_OPTIONS.h
MITgcm-checkpoint68i/pkg/pp81/pp81_calc.F
MITgcm-checkpoint68i/pkg/pp81/pp81_calc_diff.F
MITgcm-checkpoint68i/pkg/pp81/pp81_calc_visc.F
MITgcm-checkpoint68i/pkg/pp81/pp81_check.F
MITgcm-checkpoint68i/pkg/pp81/pp81_diagnostics_init.F
MITgcm-checkpoint68i/pkg/pp81/pp81_init_fixed.F
MITgcm-checkpoint68i/pkg/pp81/pp81_init_varia.F
MITgcm-checkpoint68i/pkg/pp81/pp81_output.F
MITgcm-checkpoint68i/pkg/pp81/pp81_readparms.F
MITgcm-checkpoint68i/pkg/pp81/pp81_ri_number.F
MITgcm-checkpoint68i/pkg/profiles/
MITgcm-checkpoint68i/pkg/profiles/PROFILES_OPTIONS.h
MITgcm-checkpoint68i/pkg/profiles/PROFILES_SIZE.h
MITgcm-checkpoint68i/pkg/profiles/active_file_control_profiles.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.flow
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_ad.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_g.F
MITgcm-checkpoint68i/pkg/profiles/cost_profiles.F
MITgcm-checkpoint68i/pkg/profiles/profiles.flow
MITgcm-checkpoint68i/pkg/profiles/profiles.h
MITgcm-checkpoint68i/pkg/profiles/profiles_ad_diff.list
MITgcm-checkpoint68i/pkg/profiles/profiles_findunit.F
MITgcm-checkpoint68i/pkg/profiles/profiles_ini_io.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_fixed.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_ncfile.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_varia.F
MITgcm-checkpoint68i/pkg/profiles/profiles_inloop.F
MITgcm-checkpoint68i/pkg/profiles/profiles_interp.F
MITgcm-checkpoint68i/pkg/profiles/profiles_readparms.F
MITgcm-checkpoint68i/pkg/profiles/profiles_readvector.F
MITgcm-checkpoint68i/pkg/ptracers/
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_FIELDS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_MOD.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_OPTIONS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_PARAMS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_SIZE.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_START.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_TAVE.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad.flow
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_diff.list
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_dump.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_adcommon.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_apply_forcing.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_calc_wsurf_tr.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_check.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_check_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_convect.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_debug.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_state.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_data_mod.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_mod.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_fields_blocking_exch.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_forcing_surf.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_fixed.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_varia.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_integrate.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_mnc_init.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor_ad.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_output.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_read_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_readparms.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_reset.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_set_iolabel.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_switch_onoff.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_timeave.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_turnoff_io.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_state.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_timeave.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_zonal_filt_apply.F
MITgcm-checkpoint68i/pkg/rbcs/
MITgcm-checkpoint68i/pkg/rbcs/RBCS_FIELDS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_OPTIONS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_PARAMS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_SIZE.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_diff.list
MITgcm-checkpoint68i/pkg/rbcs/rbcs_add_tendency.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_fields_load.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_fixed.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_varia.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_readparms.F
MITgcm-checkpoint68i/pkg/regrid/
MITgcm-checkpoint68i/pkg/regrid/Makefile
MITgcm-checkpoint68i/pkg/regrid/REGRID.h
MITgcm-checkpoint68i/pkg/regrid/REGRID_OPTIONS.h
MITgcm-checkpoint68i/pkg/regrid/REGRID_SIZE.h
MITgcm-checkpoint68i/pkg/regrid/regrid_check.F
MITgcm-checkpoint68i/pkg/regrid/regrid_description.tex
MITgcm-checkpoint68i/pkg/regrid/regrid_init_fixed.F
MITgcm-checkpoint68i/pkg/regrid/regrid_init_varia.F
MITgcm-checkpoint68i/pkg/regrid/regrid_mnc_init.F
MITgcm-checkpoint68i/pkg/regrid/regrid_readparms.F
MITgcm-checkpoint68i/pkg/regrid/regrid_scalar_out.template
MITgcm-checkpoint68i/pkg/runclock/
MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK.h
MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK_OPTIONS.h
MITgcm-checkpoint68i/pkg/runclock/runclock_check.F
MITgcm-checkpoint68i/pkg/runclock/runclock_continue.F
MITgcm-checkpoint68i/pkg/runclock/runclock_gettime.F
MITgcm-checkpoint68i/pkg/runclock/runclock_init.F
MITgcm-checkpoint68i/pkg/runclock/runclock_readparms.F
MITgcm-checkpoint68i/pkg/rw/
MITgcm-checkpoint68i/pkg/rw/RW_MFLDS.h
MITgcm-checkpoint68i/pkg/rw/RW_OPTIONS.h
MITgcm-checkpoint68i/pkg/rw/get_write_global_fld.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rl.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rs.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rl.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rs.F
MITgcm-checkpoint68i/pkg/rw/read_glvec_rl.F
MITgcm-checkpoint68i/pkg/rw/read_glvec_rs.F
MITgcm-checkpoint68i/pkg/rw/read_mflds.F
MITgcm-checkpoint68i/pkg/rw/read_rec.F
MITgcm-checkpoint68i/pkg/rw/rw_ad.flow
MITgcm-checkpoint68i/pkg/rw/rw_ad_diff.list
MITgcm-checkpoint68i/pkg/rw/rw_get_suffix.F
MITgcm-checkpoint68i/pkg/rw/set_write_global_fld.F
MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rs.F
MITgcm-checkpoint68i/pkg/rw/write_glvec_rl.F
MITgcm-checkpoint68i/pkg/rw/write_glvec_rs.F
MITgcm-checkpoint68i/pkg/rw/write_local_rl.F
MITgcm-checkpoint68i/pkg/rw/write_local_rs.F
MITgcm-checkpoint68i/pkg/rw/write_rec.F
MITgcm-checkpoint68i/pkg/salt_plume/
MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME.h
MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME_OPTIONS.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_diff.list
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_apply.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_calc_depth.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_check.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_description.tex
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_init.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_do_exch.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_forcing_surf.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_frac.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_fixed.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_varia.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_mnc_init.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_readparms.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_s.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_t.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_volfrac.F
MITgcm-checkpoint68i/pkg/sbo/
MITgcm-checkpoint68i/pkg/sbo/SBO.h
MITgcm-checkpoint68i/pkg/sbo/SBO_OPTIONS.h
MITgcm-checkpoint68i/pkg/sbo/sbo_calc.F
MITgcm-checkpoint68i/pkg/sbo/sbo_check.F
MITgcm-checkpoint68i/pkg/sbo/sbo_description.tex
MITgcm-checkpoint68i/pkg/sbo/sbo_output.F
MITgcm-checkpoint68i/pkg/sbo/sbo_readparms.F
MITgcm-checkpoint68i/pkg/sbo/sbo_rho.F
MITgcm-checkpoint68i/pkg/seaice/
MITgcm-checkpoint68i/pkg/seaice/SEAICE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_COST.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_PARAMS.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_SIZE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_TAVE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_TRACER.h
MITgcm-checkpoint68i/pkg/seaice/advect.F
MITgcm-checkpoint68i/pkg/seaice/cost_ice_test.F
MITgcm-checkpoint68i/pkg/seaice/diffus.F
MITgcm-checkpoint68i/pkg/seaice/dynsolver.F
MITgcm-checkpoint68i/pkg/seaice/lsr.F
MITgcm-checkpoint68i/pkg/seaice/ostres.F
MITgcm-checkpoint68i/pkg/seaice/seaice.flow
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_diff.list
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_dump.F
MITgcm-checkpoint68i/pkg/seaice/seaice_advdiff.F
MITgcm-checkpoint68i/pkg/seaice/seaice_advection.F
MITgcm-checkpoint68i/pkg/seaice/seaice_bottomdrag_coeffs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_budget_ocean.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_ice_strength.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_lhs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_residual.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_rhs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_strainrates.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_stressdiv.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_viscosities.F
MITgcm-checkpoint68i/pkg/seaice/seaice_check.F
MITgcm-checkpoint68i/pkg/seaice/seaice_check_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_accumulate_mean.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_areasst.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_concentration.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_driver.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_export.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_final.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_fixed.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_varia.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sensi.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sss.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sst.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_weights.F
MITgcm-checkpoint68i/pkg/seaice/seaice_ctrl_map_ini.F
MITgcm-checkpoint68i/pkg/seaice/seaice_description.tex
MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_init.F
MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/seaice/seaice_diffusion.F
MITgcm-checkpoint68i/pkg/seaice/seaice_do_ridging.F
MITgcm-checkpoint68i/pkg/seaice/seaice_dynsolver.F
MITgcm-checkpoint68i/pkg/seaice/seaice_evp.F
MITgcm-checkpoint68i/pkg/seaice/seaice_fake.F
MITgcm-checkpoint68i/pkg/seaice/seaice_fgmres.F
MITgcm-checkpoint68i/pkg/seaice/seaice_freedrift.F
MITgcm-checkpoint68i/pkg/seaice/seaice_get_dynforcing.F
MITgcm-checkpoint68i/pkg/seaice/seaice_growth.F
MITgcm-checkpoint68i/pkg/seaice/seaice_growth_adx.F
MITgcm-checkpoint68i/pkg/seaice/seaice_init_fixed.F
MITgcm-checkpoint68i/pkg/seaice/seaice_init_varia.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_redist.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_remap.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_sum.F
MITgcm-checkpoint68i/pkg/seaice/seaice_jacvec.F
MITgcm-checkpoint68i/pkg/seaice/seaice_jfnk.F
MITgcm-checkpoint68i/pkg/seaice/seaice_krylov.F
MITgcm-checkpoint68i/pkg/seaice/seaice_lsr.F
MITgcm-checkpoint68i/pkg/seaice/seaice_map_thsice.F
MITgcm-checkpoint68i/pkg/seaice/seaice_mnc_init.F
MITgcm-checkpoint68i/pkg/seaice/seaice_model.F
MITgcm-checkpoint68i/pkg/seaice/seaice_mom_advection.F
MITgcm-checkpoint68i/pkg/seaice/seaice_monitor.F
MITgcm-checkpoint68i/pkg/seaice/seaice_monitor_ad.F
MITgcm-checkpoint68i/pkg/seaice/seaice_obcs_output.F
MITgcm-checkpoint68i/pkg/seaice/seaice_ocean_stress.F
MITgcm-checkpoint68i/pkg/seaice/seaice_oceandrag_coeffs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_output.F
MITgcm-checkpoint68i/pkg/seaice/seaice_preconditioner.F
MITgcm-checkpoint68i/pkg/seaice/seaice_prepare_ridging.F
MITgcm-checkpoint68i/pkg/seaice/seaice_read_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_readparms.F
MITgcm-checkpoint68i/pkg/seaice/seaice_reg_ridge.F
MITgcm-checkpoint68i/pkg/seaice/seaice_solve4temp.F
MITgcm-checkpoint68i/pkg/seaice/seaice_summary.F
MITgcm-checkpoint68i/pkg/seaice/seaice_tracer_phys.F
MITgcm-checkpoint68i/pkg/seaice/seaice_turnoff_io.F
MITgcm-checkpoint68i/pkg/seaice/seaice_write_pickup.F
MITgcm-checkpoint68i/pkg/shap_filt/
MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT.h
MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT_OPTIONS.h
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_ad_diff.list
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_ts.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_uv.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_computvort.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_diagnostics_init.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_init_fixed.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_readparms.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_relvort3.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s1.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s2.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s4.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracerold.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_u.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s1.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2c.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s4.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_v.F
MITgcm-checkpoint68i/pkg/shelfice/
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_COST.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_TAVE.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_diff.list
MITgcm-checkpoint68i/pkg/shelfice/shelfice_check.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_accumulate.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_final.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_shifwflx.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_diagnostics_drag.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing_surf.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_depths.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_fixed.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_varia.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_mask_seaice.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_mnc_init.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_output.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_read_pickup.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_readparms.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_c_mask.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_calc_w.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_state.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_uv_mask.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remeshing.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_step_icemass.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_thermodynamics.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_u_drag_coeff.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_v_drag_coeff.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_write_pickup.F
MITgcm-checkpoint68i/pkg/showflops/
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS.h
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_INIT.h
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_OPTIONS.h
MITgcm-checkpoint68i/pkg/showflops/showflops_ad.flow
MITgcm-checkpoint68i/pkg/showflops/showflops_init.F
MITgcm-checkpoint68i/pkg/showflops/showflops_inloop.F
MITgcm-checkpoint68i/pkg/showflops/showflops_insolve.F
MITgcm-checkpoint68i/pkg/smooth/
MITgcm-checkpoint68i/pkg/smooth/SMOOTH.h
MITgcm-checkpoint68i/pkg/smooth/SMOOTH_OPTIONS.h
MITgcm-checkpoint68i/pkg/smooth/smooth2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_ad_diff.list
MITgcm-checkpoint68i/pkg/smooth/smooth_basic2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_check.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl2dw.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_description.tex
MITgcm-checkpoint68i/pkg/smooth/smooth_diff2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_diff3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_hetero2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_impldiff.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init_fixed.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init_varia.F
MITgcm-checkpoint68i/pkg/smooth/smooth_readparms.F
MITgcm-checkpoint68i/pkg/smooth/smooth_rhs.F
MITgcm-checkpoint68i/pkg/sphere/
MITgcm-checkpoint68i/pkg/sphere/exch_all_2d_rl.F
MITgcm-checkpoint68i/pkg/sphere/sphere.F
MITgcm-checkpoint68i/pkg/sphere/sphere.h
MITgcm-checkpoint68i/pkg/sphere/sphere_ad.flow
MITgcm-checkpoint68i/pkg/sphere/sphere_ad_diff.list
MITgcm-checkpoint68i/pkg/streamice/
MITgcm-checkpoint68i/pkg/streamice/STREAMICE.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_ADV.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_BDRY.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CG.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CTRL_FLUX.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_PETSC.h
MITgcm-checkpoint68i/pkg/streamice/adstreamice_cg_solve.F
MITgcm-checkpoint68i/pkg/streamice/adstreamice_invert_surf_forthick.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_prime_streamice.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice_prime.F
MITgcm-checkpoint68i/pkg/streamice/phi_gl_streamice.F
MITgcm-checkpoint68i/pkg/streamice/slope_limiter.F
MITgcm-checkpoint68i/pkg/streamice/streamice.flow
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_diff.list
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_x.F
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_y.F
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_front.F
MITgcm-checkpoint68i/pkg/streamice/streamice_advect_2dtracer.F
MITgcm-checkpoint68i/pkg/streamice/streamice_advect_thickness.F
MITgcm-checkpoint68i/pkg/streamice/streamice_apply_flux_ctrl.F
MITgcm-checkpoint68i/pkg/streamice/streamice_bstress_exponent.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_functions.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_matfree.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_wrapper.F
MITgcm-checkpoint68i/pkg/streamice/streamice_check.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cost_surf_accum.F
MITgcm-checkpoint68i/pkg/streamice/streamice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_fd.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_ppm.F
MITgcm-checkpoint68i/pkg/streamice/streamice_dump.F
MITgcm-checkpoint68i/pkg/streamice/streamice_dump_ad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_fields_load.F
MITgcm-checkpoint68i/pkg/streamice/streamice_finalize_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_forced_buttress.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_fp_err_oad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_fp_err.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err_oad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_diagnostics.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_fixed.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_phi.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_varia.F
MITgcm-checkpoint68i/pkg/streamice/streamice_initialise_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_invert_surf_forthick.F
MITgcm-checkpoint68i/pkg/streamice/streamice_petsc_numerate.F
MITgcm-checkpoint68i/pkg/streamice/streamice_petscmatdestroy.F
MITgcm-checkpoint68i/pkg/streamice/streamice_read_pickup.F
MITgcm-checkpoint68i/pkg/streamice/streamice_readparms.F
MITgcm-checkpoint68i/pkg/streamice/streamice_taub.F
MITgcm-checkpoint68i/pkg/streamice/streamice_timestep.F
MITgcm-checkpoint68i/pkg/streamice/streamice_tridiag_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_upd_ffrac_uncoupled.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phi.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phistage.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve_openad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_velmask_upd.F
MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta.F
MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta_hybrid.F
MITgcm-checkpoint68i/pkg/streamice/streamice_write_pickup.F
MITgcm-checkpoint68i/pkg/thsice/
MITgcm-checkpoint68i/pkg/thsice/THSICE_COST.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_DEBUG.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_PARAMS.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_SIZE.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_TAVE.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_VARS.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad.flow
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_diff.list
MITgcm-checkpoint68i/pkg/thsice/thsice_advdiff.F
MITgcm-checkpoint68i/pkg/thsice/thsice_advection.F
MITgcm-checkpoint68i/pkg/thsice/thsice_albedo.F
MITgcm-checkpoint68i/pkg/thsice/thsice_ave.F
MITgcm-checkpoint68i/pkg/thsice/thsice_balance_frw.F
MITgcm-checkpoint68i/pkg/thsice/thsice_calc_thickn.F
MITgcm-checkpoint68i/pkg/thsice/thsice_check.F
MITgcm-checkpoint68i/pkg/thsice/thsice_check_conserv.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_driver.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_final.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_init_varia.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_test.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_init.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diffusion.F
MITgcm-checkpoint68i/pkg/thsice/thsice_do_advect.F
MITgcm-checkpoint68i/pkg/thsice/thsice_do_exch.F
MITgcm-checkpoint68i/pkg/thsice/thsice_extend.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_bulkf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_exf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_ocean.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_precip.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_velocity.F
MITgcm-checkpoint68i/pkg/thsice/thsice_impl_temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_ini_vars.F
MITgcm-checkpoint68i/pkg/thsice/thsice_init_fixed.F
MITgcm-checkpoint68i/pkg/thsice/thsice_main.F
MITgcm-checkpoint68i/pkg/thsice/thsice_map_exf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_mnc_init.F
MITgcm-checkpoint68i/pkg/thsice/thsice_monitor.F
MITgcm-checkpoint68i/pkg/thsice/thsice_output.F
MITgcm-checkpoint68i/pkg/thsice/thsice_read_pickup.F
MITgcm-checkpoint68i/pkg/thsice/thsice_readparms.F
MITgcm-checkpoint68i/pkg/thsice/thsice_reshape_layers.F
MITgcm-checkpoint68i/pkg/thsice/thsice_salt_plume.F
MITgcm-checkpoint68i/pkg/thsice/thsice_slab_ocean.F
MITgcm-checkpoint68i/pkg/thsice/thsice_solve4temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_step_fwd.F
MITgcm-checkpoint68i/pkg/thsice/thsice_step_temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_test_addfluid.h
MITgcm-checkpoint68i/pkg/thsice/thsice_turnoff_io.F
MITgcm-checkpoint68i/pkg/thsice/thsice_write_pickup.F
MITgcm-checkpoint68i/pkg/timeave/
MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_OPTIONS.h
MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_STATV.h
MITgcm-checkpoint68i/pkg/timeave/timeave_ad_diff.list
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1k1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1vfc.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2v.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2vfc.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_dif_1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumulate.F
MITgcm-checkpoint68i/pkg/timeave/timeave_description.tex
MITgcm-checkpoint68i/pkg/timeave/timeave_init_fixed.F
MITgcm-checkpoint68i/pkg/timeave/timeave_norma_2v.F
MITgcm-checkpoint68i/pkg/timeave/timeave_normalize.F
MITgcm-checkpoint68i/pkg/timeave/timeave_reset.F
MITgcm-checkpoint68i/pkg/timeave/timeave_statv_write.F
MITgcm-checkpoint68i/pkg/timeave/timeave_statvars.F
MITgcm-checkpoint68i/pkg/timeave/timeave_surf_flux.F
MITgcm-checkpoint68i/pkg/zonal_filt/
MITgcm-checkpoint68i/pkg/zonal_filt/FFTPACK.h
MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT.h
MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT_OPTIONS.h
MITgcm-checkpoint68i/pkg/zonal_filt/fftpack.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_ts.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_uv.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_init.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_nofill.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_postsmooth.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_presmooth.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_readparms.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filter.F
MITgcm-checkpoint68i/tools/
MITgcm-checkpoint68i/tools/OAD_support/
MITgcm-checkpoint68i/tools/OAD_support/OAD_active.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_cp.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_regular_cp.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_rev.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_tape.F90
MITgcm-checkpoint68i/tools/OAD_support/ad_inline.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xy.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xyz.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_write_xy.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.dummy_in_stepping.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rl.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rs.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_max_r8.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_r8.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_tile_rl.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.regular.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.revolve.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.sa_cg2d.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.split.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.split_non_anonymous.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_cg_solve.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_fp_err_oad.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_vel_resid_err_oad.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_invert_surf_forthick.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_smooth_adjoint_field.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_vel_phistage.F
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.awk
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.csh
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.awk
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.csh
MITgcm-checkpoint68i/tools/OAD_support/cb2mUseModules.bash
MITgcm-checkpoint68i/tools/OAD_support/dontCompile
MITgcm-checkpoint68i/tools/OAD_support/dontTransform
MITgcm-checkpoint68i/tools/OAD_support/fixData.sed
MITgcm-checkpoint68i/tools/OAD_support/iaddr.c
MITgcm-checkpoint68i/tools/OAD_support/insertTemplateDir.bash
MITgcm-checkpoint68i/tools/OAD_support/keepOriginal
MITgcm-checkpoint68i/tools/OAD_support/revolve.F90
MITgcm-checkpoint68i/tools/OAD_support/stop2print.sed
MITgcm-checkpoint68i/tools/OAD_support/strip.sed
MITgcm-checkpoint68i/tools/OAD_support/timeRatio.c
MITgcm-checkpoint68i/tools/OAD_support/w2f__types.F90
MITgcm-checkpoint68i/tools/ad_taf_output.f.adtrick.diff
MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_del1
MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_full
MITgcm-checkpoint68i/tools/ad_taf_output.f.onlyfwd.diff
MITgcm-checkpoint68i/tools/adjoint_options/
MITgcm-checkpoint68i/tools/adjoint_options/MITgcm-c64l-TAFv2.patch
MITgcm-checkpoint68i/tools/adjoint_options/README.patch
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_default
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_diva
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_f95
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_oad
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_state_final
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_tamc_compatibility
MITgcm-checkpoint68i/tools/adjoint_sed
MITgcm-checkpoint68i/tools/as
MITgcm-checkpoint68i/tools/build_options/
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-6_f90+mpi_caspur
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-6_sx90_dkrz
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-ACE_sxf90_awi
MITgcm-checkpoint68i/tools/build_options/cygwin_ia32_g77
MITgcm-checkpoint68i/tools/build_options/darwin_absoft_f77
MITgcm-checkpoint68i/tools/build_options/darwin_amd64_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_arm64_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_g95
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_ifort
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_pgf95_trane
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_f95
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_g77
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther+wienders
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther_baylor
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_tiger_baylor
MITgcm-checkpoint68i/tools/build_options/linux_alpha_g77
MITgcm-checkpoint68i/tools/build_options/linux_amd64_absoft
MITgcm-checkpoint68i/tools/build_options/linux_amd64_g77
MITgcm-checkpoint68i/tools/build_options/linux_amd64_g95
MITgcm-checkpoint68i/tools/build_options/linux_amd64_gfortran
MITgcm-checkpoint68i/tools/build_options/linux_amd64_gfortran_greenplanet
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort
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MITgcm-checkpoint68i/tools/set64bitConst.csh
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MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/grid_cs32.face005.bin
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/grid_cs32.face006.bin
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/pickup.0000276480
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/pickup.0000276480.meta
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/results/
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/run/
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/README
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/build/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/OBCS_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/packages.conf
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/Qnet.forcing
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/T.init
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/data
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/data.obcs
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/data.pkg
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/dx.bin
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/eedata
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/eedata.mth
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/gendata.m
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/topog.slope
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/results/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/run/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/README.md
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/cmap_bluetored.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/matlab_plots.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/py_notebook.ipynb
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/build/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/LAYERS_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/SIZE.h_eddy
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/packages.conf
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/SST_relax.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/T_relax_mask.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/bathy.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.diagnostics
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.gmredi
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.layers
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.pkg
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.rbcs
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/eedata
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/eedata.mth
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.50km.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.50km.py
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.5km.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.5km.py
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/temperature.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/zonal_wind.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/results/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/run/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/build/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/apply_forcing.F
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/packages.conf
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/bathyPolR.bin
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data.mnc
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data.pkg
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/eedata
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/eedata.mth
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/reduce_size.m
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/thetaPolR.bin
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/results/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/run/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/DESCRIPTION
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/README
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/build/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/AUTODIFF_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/COST_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/CTRL_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/CTRL_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/GAD_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/MDSIO_BUFF_WH.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/packages.conf
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/ptracers_forcing_surf.F
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/tamc.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/AUTODIFF_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/COST_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/CTRL_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/CTRL_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/GAD_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/OPENAD_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/cb2mFiles
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/ctrl_map_ini_genarr.F
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/packages.conf
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/ptracers_forcing_surf.F
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad.som81/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad.som81/data
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.autodiff
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.cost
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.ctrl
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.gmredi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.grdchk
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.optim
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.pkg
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.ptracers
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/eedata
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/prepare_run
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.autodiff
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.cost
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.ctrl
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.gmredi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.grdchk
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.optim
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.pkg
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.ptracers
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/eedata
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/ncheckLev.conf
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/prepare_run
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_adm.som81.txt
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_adm.txt
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_oadm.txt
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_tlm.som81.txt.gz
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_tlm.txt.gz
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/.gitignore
MITgcm-checkpoint68i/verification/verification_parser.py
MITgcm-checkpoint68i/verification/vermix/
MITgcm-checkpoint68i/verification/vermix/build/
MITgcm-checkpoint68i/verification/vermix/build/.gitignore
MITgcm-checkpoint68i/verification/vermix/code/
MITgcm-checkpoint68i/verification/vermix/code/CPP_EEOPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/verification/vermix/code/KPP_OPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/SIZE.h
MITgcm-checkpoint68i/verification/vermix/code/packages.conf
MITgcm-checkpoint68i/verification/vermix/input.dd/
MITgcm-checkpoint68i/verification/vermix/input.dd/data
MITgcm-checkpoint68i/verification/vermix/input.dd/data.kpp
MITgcm-checkpoint68i/verification/vermix/input.ggl90/
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.ggl90
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.my82/
MITgcm-checkpoint68i/verification/vermix/input.my82/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.my82/data.my82
MITgcm-checkpoint68i/verification/vermix/input.my82/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.opps/
MITgcm-checkpoint68i/verification/vermix/input.opps/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.opps/data.opps
MITgcm-checkpoint68i/verification/vermix/input.opps/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.pp81/
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pp81
MITgcm-checkpoint68i/verification/vermix/input/
MITgcm-checkpoint68i/verification/vermix/input/Qnet_72.forcing
MITgcm-checkpoint68i/verification/vermix/input/S.doublediff
MITgcm-checkpoint68i/verification/vermix/input/S.init
MITgcm-checkpoint68i/verification/vermix/input/T.doublediff
MITgcm-checkpoint68i/verification/vermix/input/TKE.init
MITgcm-checkpoint68i/verification/vermix/input/T_26.init
MITgcm-checkpoint68i/verification/vermix/input/data
MITgcm-checkpoint68i/verification/vermix/input/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input/data.kpp
MITgcm-checkpoint68i/verification/vermix/input/data.mnc
MITgcm-checkpoint68i/verification/vermix/input/data.pkg
MITgcm-checkpoint68i/verification/vermix/input/eedata
MITgcm-checkpoint68i/verification/vermix/input/gendata.m
MITgcm-checkpoint68i/verification/vermix/input/taux_72.forcing
MITgcm-checkpoint68i/verification/vermix/input/tr_checklist
MITgcm-checkpoint68i/verification/vermix/results/
MITgcm-checkpoint68i/verification/vermix/results/output.dd.txt
MITgcm-checkpoint68i/verification/vermix/results/output.ggl90.txt
MITgcm-checkpoint68i/verification/vermix/results/output.my82.txt
MITgcm-checkpoint68i/verification/vermix/results/output.opps.txt
MITgcm-checkpoint68i/verification/vermix/results/output.pp81.txt
MITgcm-checkpoint68i/verification/vermix/results/output.txt
MITgcm-checkpoint68i/verification/vermix/run/
MITgcm-checkpoint68i/verification/vermix/run/.gitignore

[41;37m   step #5: BuildMITgcm   [0m


GENMAKE :

A program for GENerating MAKEfiles for the MITgcm project.
   For a quick list of options, use "genmake2 -h"
or for more detail see the documentation, section "Building the model"
   (under "Getting Started") at:  https://mitgcm.readthedocs.io/

===  Processing options files and arguments  ===
  getting local config information:  none found
  getting OPTFILE information:
Warning: no OPTFILE specified so we'll look for possible settings

===  Searching for possible settings for OPTFILE  ===
  The platform appears to be:  linux_amd64
  The possible FORTRAN compilers found in your path are:  gfortran f77 f95 mpif77
  Setting OPTFILE to: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran
    using OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran"
    get Compiler-version: '12'
  getting AD_OPTFILE information:
    using AD_OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/adjoint_options/adjoint_default"
  check Fortran Compiler...  pass  (set FC_CHECK=5/5)
  check makedepend (local: 0, system: 1, 1)
  Turning on MPI cpp macros

===  Checking system libraries  ===
  Do we have the system() command using mpif77...  yes
  Do we have the fdate() command using mpif77...  yes
  Do we have the etime() command using mpif77... c,r: yes (SbR)
  Can we call simple C routines (here, "cloc()") using mpif77...  yes
  Can we unlimit the stack size using mpif77...  yes
  Can we register a signal handler using mpif77...  yes
  Can we use stat() through C calls...  yes
  Can we create NetCDF-enabled binaries...  no
    skip check for LAPACK Libs
  Can we call FLUSH intrinsic subroutine...  yes

===  Setting defaults  ===
  Adding MODS directories: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code 
  Making source files in eesupp from templates
  Making source files in pkg/exch2 from templates
  Making source files in pkg/regrid from templates

===  Determining package settings  ===
  getting package dependency info from  /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_depend
  getting package groups info from      /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_groups
  checking list of packages to compile:
    using PKG_LIST="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/packages.conf"
    before group expansion packages are: gfd obcs shelfice diagnostics timeave
    replacing "gfd" with:  mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor
    after group expansion packages are:  mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor obcs shelfice diagnostics timeave
  applying DISABLE settings
  applying ENABLE settings
    packages are:  debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave
  applying package dependency rules
    packages are:  debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave
  Adding STANDARDDIRS='eesupp model'
  Searching for *OPTIONS.h files in order to warn about the presence
    of "#define "-type statements that are no longer allowed:
    found CPP_EEOPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h"
    found CPP_OPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h"
  Creating the list of files for the adjoint compiler.

===  Creating the Makefile  ===
  setting INCLUDES
  Determining the list of source and include files
  Writing makefile: Makefile
  Add the source list for AD code generation
  Making list of "exceptions" that need ".p" files
  Making list of NOOPTFILES
  Add rules for links
  Adding makedepend marker

===  Done  ===
  original 'Makefile' generated successfully
=> next steps:
  > make depend
  > make       (<-- to generate executable)
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build'
if [ ! -L cpl_issm.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/cpl_issm.F cpl_issm.F; fi
if [ ! -L do_oceanic_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/do_oceanic_phys.F do_oceanic_phys.F; fi
if [ ! -L eeboot_minimal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eeboot_minimal.F eeboot_minimal.F; fi
if [ ! -L eedie.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eedie.F eedie.F; fi
if [ ! -L chksum_tiled.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/chksum_tiled.F chksum_tiled.F; fi
if [ ! -L debug_call.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_call.F debug_call.F; fi
if [ ! -L debug_cs_corner_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_cs_corner_uv.F debug_cs_corner_uv.F; fi
if [ ! -L debug_enter.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_enter.F debug_enter.F; fi
if [ ! -L debug_fld_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rl.F debug_fld_stats_rl.F; fi
if [ ! -L debug_fld_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rs.F debug_fld_stats_rs.F; fi
if [ ! -L debug_leave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_leave.F debug_leave.F; fi
if [ ! -L debug_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_msg.F debug_msg.F; fi
if [ ! -L debug_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rl.F debug_stats_rl.F; fi
if [ ! -L debug_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rs.F debug_stats_rs.F; fi
if [ ! -L fill_in_corners_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/fill_in_corners_rl.F fill_in_corners_rl.F; fi
if [ ! -L write_fullarray_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rl.F write_fullarray_rl.F; fi
if [ ! -L write_fullarray_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rs.F write_fullarray_rs.F; fi
if [ ! -L diag_calc_psivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_calc_psivel.F diag_calc_psivel.F; fi
if [ ! -L diag_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_cg2d.F diag_cg2d.F; fi
if [ ! -L diagnostics_addtolist.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_addtolist.F diagnostics_addtolist.F; fi
if [ ! -L diagnostics_calc_phivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_calc_phivel.F diagnostics_calc_phivel.F; fi
if [ ! -L diagnostics_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_check.F diagnostics_check.F; fi
if [ ! -L diagnostics_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_clear.F diagnostics_clear.F; fi
if [ ! -L diagnostics_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill.F diagnostics_fill.F; fi
if [ ! -L diagnostics_fill_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_field.F diagnostics_fill_field.F; fi
if [ ! -L diagnostics_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_rs.F diagnostics_fill_rs.F; fi
if [ ! -L diagnostics_fill_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_state.F diagnostics_fill_state.F; fi
if [ ! -L diagnostics_fract_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fract_fill.F diagnostics_fract_fill.F; fi
if [ ! -L diagnostics_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_ini_io.F diagnostics_ini_io.F; fi
if [ ! -L diagnostics_init_early.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_early.F diagnostics_init_early.F; fi
if [ ! -L diagnostics_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_fixed.F diagnostics_init_fixed.F; fi
if [ ! -L diagnostics_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_varia.F diagnostics_init_varia.F; fi
if [ ! -L diagnostics_interp_p2p.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_p2p.F diagnostics_interp_p2p.F; fi
if [ ! -L diagnostics_interp_vert.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_vert.F diagnostics_interp_vert.F; fi
if [ ! -L diagnostics_is_on.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_is_on.F diagnostics_is_on.F; fi
if [ ! -L diagnostics_list_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_list_check.F diagnostics_list_check.F; fi
if [ ! -L diagnostics_main_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_main_init.F diagnostics_main_init.F; fi
if [ ! -L diagnostics_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_mnc_out.F diagnostics_mnc_out.F; fi
if [ ! -L diagnostics_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_out.F diagnostics_out.F; fi
if [ ! -L diagnostics_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_readparms.F diagnostics_readparms.F; fi
if [ ! -L diagnostics_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_read_pickup.F diagnostics_read_pickup.F; fi
if [ ! -L diagnostics_scale_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill.F diagnostics_scale_fill.F; fi
if [ ! -L diagnostics_scale_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill_rs.F diagnostics_scale_fill_rs.F; fi
if [ ! -L diagnostics_set_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_calc.F diagnostics_set_calc.F; fi
if [ ! -L diagnostics_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_setdiag.F diagnostics_setdiag.F; fi
if [ ! -L diagnostics_set_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_levels.F diagnostics_set_levels.F; fi
if [ ! -L diagnostics_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_pointers.F diagnostics_set_pointers.F; fi
if [ ! -L diagnostics_status_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_status_error.F diagnostics_status_error.F; fi
if [ ! -L diagnostics_sum_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_sum_levels.F diagnostics_sum_levels.F; fi
if [ ! -L diagnostics_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_summary.F diagnostics_summary.F; fi
if [ ! -L diagnostics_switch_onoff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_switch_onoff.F diagnostics_switch_onoff.F; fi
if [ ! -L diagnostics_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_utils.F diagnostics_utils.F; fi
if [ ! -L diagnostics_write_adj.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_adj.F diagnostics_write_adj.F; fi
if [ ! -L diagnostics_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write.F diagnostics_write.F; fi
if [ ! -L diagnostics_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_pickup.F diagnostics_write_pickup.F; fi
if [ ! -L diagstats_ascii_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ascii_out.F diagstats_ascii_out.F; fi
if [ ! -L diagstats_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_calc.F diagstats_calc.F; fi
if [ ! -L diagstats_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_clear.F diagstats_clear.F; fi
if [ ! -L diagstats_close_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_close_io.F diagstats_close_io.F; fi
if [ ! -L diagstats_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_fill.F diagstats_fill.F; fi
if [ ! -L diagstats_global.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_global.F diagstats_global.F; fi
if [ ! -L diagstats_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ini_io.F diagstats_ini_io.F; fi
if [ ! -L diagstats_local.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_local.F diagstats_local.F; fi
if [ ! -L diagstats_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_mnc_out.F diagstats_mnc_out.F; fi
if [ ! -L diagstats_others_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_others_calc.F diagstats_others_calc.F; fi
if [ ! -L diagstats_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_output.F diagstats_output.F; fi
if [ ! -L diagstats_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_setdiag.F diagstats_setdiag.F; fi
if [ ! -L diagstats_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_pointers.F diagstats_set_pointers.F; fi
if [ ! -L diagstats_set_regions.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_regions.F diagstats_set_regions.F; fi
if [ ! -L diag_vegtile_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_vegtile_fill.F diag_vegtile_fill.F; fi
if [ ! -L gad_advection.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advection.F gad_advection.F; fi
if [ ! -L gad_advscheme.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advscheme.F gad_advscheme.F; fi
if [ ! -L gad_biharm_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_r.F gad_biharm_r.F; fi
if [ ! -L gad_biharm_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_x.F gad_biharm_x.F; fi
if [ ! -L gad_biharm_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_y.F gad_biharm_y.F; fi
if [ ! -L gad_c2_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_r.F gad_c2_adv_r.F; fi
if [ ! -L gad_c2_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_x.F gad_c2_adv_x.F; fi
if [ ! -L gad_c2_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_y.F gad_c2_adv_y.F; fi
if [ ! -L gad_c2_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_impl_r.F gad_c2_impl_r.F; fi
if [ ! -L gad_c4_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_r.F gad_c4_adv_r.F; fi
if [ ! -L gad_c4_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_x.F gad_c4_adv_x.F; fi
if [ ! -L gad_c4_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_y.F gad_c4_adv_y.F; fi
if [ ! -L gad_calc_rhs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_calc_rhs.F gad_calc_rhs.F; fi
if [ ! -L gad_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_check.F gad_check.F; fi
if [ ! -L gad_del2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_del2.F gad_del2.F; fi
if [ ! -L gad_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_init.F gad_diagnostics_init.F; fi
if [ ! -L gad_diagnostics_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_state.F gad_diagnostics_state.F; fi
if [ ! -L gad_diff_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_r.F gad_diff_r.F; fi
if [ ! -L gad_diff_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_x.F gad_diff_x.F; fi
if [ ! -L gad_diff_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_y.F gad_diff_y.F; fi
if [ ! -L gad_dst2u1_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_r.F gad_dst2u1_adv_r.F; fi
if [ ! -L gad_dst2u1_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_x.F gad_dst2u1_adv_x.F; fi
if [ ! -L gad_dst2u1_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_y.F gad_dst2u1_adv_y.F; fi
if [ ! -L gad_dst2u1_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_impl_r.F gad_dst2u1_impl_r.F; fi
if [ ! -L gad_dst3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_r.F gad_dst3_adv_r.F; fi
if [ ! -L gad_dst3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_x.F gad_dst3_adv_x.F; fi
if [ ! -L gad_dst3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_y.F gad_dst3_adv_y.F; fi
if [ ! -L gad_dst3fl_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_r.F gad_dst3fl_adv_r.F; fi
if [ ! -L gad_dst3fl_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_x.F gad_dst3fl_adv_x.F; fi
if [ ! -L gad_dst3fl_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_y.F gad_dst3fl_adv_y.F; fi
if [ ! -L gad_dst3fl_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_impl_r.F gad_dst3fl_impl_r.F; fi
if [ ! -L gad_exch_som.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_exch_som.F gad_exch_som.F; fi
if [ ! -L gad_fluxlimit_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_r.F gad_fluxlimit_adv_r.F; fi
if [ ! -L gad_fluxlimit_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_x.F gad_fluxlimit_adv_x.F; fi
if [ ! -L gad_fluxlimit_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_y.F gad_fluxlimit_adv_y.F; fi
if [ ! -L gad_fluxlimit_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_impl_r.F gad_fluxlimit_impl_r.F; fi
if [ ! -L gad_grad_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_x.F gad_grad_x.F; fi
if [ ! -L gad_grad_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_y.F gad_grad_y.F; fi
if [ ! -L gad_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_implicit_r.F gad_implicit_r.F; fi
if [ ! -L gad_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_fixed.F gad_init_fixed.F; fi
if [ ! -L gad_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_varia.F gad_init_varia.F; fi
if [ ! -L gad_os7mp_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_r.F gad_os7mp_adv_r.F; fi
if [ ! -L gad_os7mp_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_x.F gad_os7mp_adv_x.F; fi
if [ ! -L gad_os7mp_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_y.F gad_os7mp_adv_y.F; fi
if [ ! -L gad_osc_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_r.F gad_osc_hat_r.F; fi
if [ ! -L gad_osc_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_x.F gad_osc_hat_x.F; fi
if [ ! -L gad_osc_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_y.F gad_osc_hat_y.F; fi
if [ ! -L gad_osc_mul_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_r.F gad_osc_mul_r.F; fi
if [ ! -L gad_osc_mul_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_x.F gad_osc_mul_x.F; fi
if [ ! -L gad_osc_mul_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_y.F gad_osc_mul_y.F; fi
if [ ! -L gad_plm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_plm_fun.F gad_plm_fun.F; fi
if [ ! -L gad_ppm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_r.F gad_ppm_adv_r.F; fi
if [ ! -L gad_ppm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_x.F gad_ppm_adv_x.F; fi
if [ ! -L gad_ppm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_y.F gad_ppm_adv_y.F; fi
if [ ! -L gad_ppm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_r.F gad_ppm_flx_r.F; fi
if [ ! -L gad_ppm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_x.F gad_ppm_flx_x.F; fi
if [ ! -L gad_ppm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_y.F gad_ppm_flx_y.F; fi
if [ ! -L gad_ppm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_fun.F gad_ppm_fun.F; fi
if [ ! -L gad_ppm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_r.F gad_ppm_hat_r.F; fi
if [ ! -L gad_ppm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_x.F gad_ppm_hat_x.F; fi
if [ ! -L gad_ppm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_y.F gad_ppm_hat_y.F; fi
if [ ! -L gad_ppm_p3e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_r.F gad_ppm_p3e_r.F; fi
if [ ! -L gad_ppm_p3e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_x.F gad_ppm_p3e_x.F; fi
if [ ! -L gad_ppm_p3e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_y.F gad_ppm_p3e_y.F; fi
if [ ! -L gad_pqm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_r.F gad_pqm_adv_r.F; fi
if [ ! -L gad_pqm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_x.F gad_pqm_adv_x.F; fi
if [ ! -L gad_pqm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_y.F gad_pqm_adv_y.F; fi
if [ ! -L gad_pqm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_r.F gad_pqm_flx_r.F; fi
if [ ! -L gad_pqm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_x.F gad_pqm_flx_x.F; fi
if [ ! -L gad_pqm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_y.F gad_pqm_flx_y.F; fi
if [ ! -L gad_pqm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_fun.F gad_pqm_fun.F; fi
if [ ! -L gad_pqm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_r.F gad_pqm_hat_r.F; fi
if [ ! -L gad_pqm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_x.F gad_pqm_hat_x.F; fi
if [ ! -L gad_pqm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_y.F gad_pqm_hat_y.F; fi
if [ ! -L gad_pqm_p5e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_r.F gad_pqm_p5e_r.F; fi
if [ ! -L gad_pqm_p5e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_x.F gad_pqm_p5e_x.F; fi
if [ ! -L gad_pqm_p5e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_y.F gad_pqm_p5e_y.F; fi
if [ ! -L gad_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_read_pickup.F gad_read_pickup.F; fi
if [ ! -L gad_som_advect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_advect.F gad_som_advect.F; fi
if [ ! -L gad_som_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_r.F gad_som_adv_r.F; fi
if [ ! -L gad_som_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_x.F gad_som_adv_x.F; fi
if [ ! -L gad_som_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_y.F gad_som_adv_y.F; fi
if [ ! -L gad_som_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_exchanges.F gad_som_exchanges.F; fi
if [ ! -L gad_som_fill_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_fill_cs_corner.F gad_som_fill_cs_corner.F; fi
if [ ! -L gad_som_lim_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_lim_r.F gad_som_lim_r.F; fi
if [ ! -L gad_som_prep_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_prep_cs_corner.F gad_som_prep_cs_corner.F; fi
if [ ! -L gad_u3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_r.F gad_u3_adv_r.F; fi
if [ ! -L gad_u3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_x.F gad_u3_adv_x.F; fi
if [ ! -L gad_u3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_y.F gad_u3_adv_y.F; fi
if [ ! -L gad_u3c4_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3c4_impl_r.F gad_u3c4_impl_r.F; fi
if [ ! -L gad_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_write_pickup.F gad_write_pickup.F; fi
if [ ! -L salt_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/salt_fill.F salt_fill.F; fi
if [ ! -L mdsio_buffertorl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertorl.F mdsio_buffertorl.F; fi
if [ ! -L mdsio_buffertors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertors.F mdsio_buffertors.F; fi
if [ ! -L mdsio_check4file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_check4file.F mdsio_check4file.F; fi
if [ ! -L mdsio_facef_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_facef_read.F mdsio_facef_read.F; fi
if [ ! -L mdsio_gl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl.F mdsio_gl.F; fi
if [ ! -L mdsio_gl_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl_slice.F mdsio_gl_slice.F; fi
if [ ! -L mdsio_pass_r4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4torl.F mdsio_pass_r4torl.F; fi
if [ ! -L mdsio_pass_r4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4tors.F mdsio_pass_r4tors.F; fi
if [ ! -L mdsio_pass_r8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8torl.F mdsio_pass_r8torl.F; fi
if [ ! -L mdsio_pass_r8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8tors.F mdsio_pass_r8tors.F; fi
if [ ! -L mdsio_rd_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rl.F mdsio_rd_rec_rl.F; fi
if [ ! -L mdsio_rd_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rs.F mdsio_rd_rec_rs.F; fi
if [ ! -L mdsio_read_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_field.F mdsio_read_field.F; fi
if [ ! -L mdsio_read_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_meta.F mdsio_read_meta.F; fi
if [ ! -L mdsio_read_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_section.F mdsio_read_section.F; fi
if [ ! -L mdsio_read_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_tape.F mdsio_read_tape.F; fi
if [ ! -L mdsio_readvec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_readvec_loc.F mdsio_readvec_loc.F; fi
if [ ! -L mdsio_read_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_whalos.F mdsio_read_whalos.F; fi
if [ ! -L mdsio_rw_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_field.F mdsio_rw_field.F; fi
if [ ! -L mdsio_rw_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_slice.F mdsio_rw_slice.F; fi
if [ ! -L mdsio_seg4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4torl.F mdsio_seg4torl.F; fi
if [ ! -L mdsio_seg4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4tors.F mdsio_seg4tors.F; fi
if [ ! -L mdsio_seg8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8torl.F mdsio_seg8torl.F; fi
if [ ! -L mdsio_seg8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8tors.F mdsio_seg8tors.F; fi
if [ ! -L mdsio_segxtorx_2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_segxtorx_2d.F mdsio_segxtorx_2d.F; fi
if [ ! -L mdsio_write_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_field.F mdsio_write_field.F; fi
if [ ! -L mdsio_writelocal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writelocal.F mdsio_writelocal.F; fi
if [ ! -L mdsio_write_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_meta.F mdsio_write_meta.F; fi
if [ ! -L mdsio_write_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_section.F mdsio_write_section.F; fi
if [ ! -L mdsio_write_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_tape.F mdsio_write_tape.F; fi
if [ ! -L mdsio_writevec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writevec_loc.F mdsio_writevec_loc.F; fi
if [ ! -L mdsio_write_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_whalos.F mdsio_write_whalos.F; fi
if [ ! -L mdsio_wr_metafiles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_metafiles.F mdsio_wr_metafiles.F; fi
if [ ! -L mdsio_wr_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rl.F mdsio_wr_rec_rl.F; fi
if [ ! -L mdsio_wr_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rs.F mdsio_wr_rec_rs.F; fi
if [ ! -L mom_calc_3d_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_3d_strain.F mom_calc_3d_strain.F; fi
if [ ! -L mom_calc_absvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_absvort3.F mom_calc_absvort3.F; fi
if [ ! -L mom_calc_hdiv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hdiv.F mom_calc_hdiv.F; fi
if [ ! -L mom_calc_hfacz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hfacz.F mom_calc_hfacz.F; fi
if [ ! -L mom_calc_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_ke.F mom_calc_ke.F; fi
if [ ! -L mom_calc_relvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_relvort3.F mom_calc_relvort3.F; fi
if [ ! -L mom_calc_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_smag_3d.F mom_calc_smag_3d.F; fi
if [ ! -L mom_calc_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_strain.F mom_calc_strain.F; fi
if [ ! -L mom_calc_tension.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_tension.F mom_calc_tension.F; fi
if [ ! -L mom_calc_visc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_visc.F mom_calc_visc.F; fi
if [ ! -L mom_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_diagnostics_init.F mom_diagnostics_init.F; fi
if [ ! -L mom_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_hdissip.F mom_hdissip.F; fi
if [ ! -L mom_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_init_fixed.F mom_init_fixed.F; fi
if [ ! -L mom_quasihydrostatic.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_quasihydrostatic.F mom_quasihydrostatic.F; fi
if [ ! -L mom_u_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_botdrag_coeff.F mom_u_botdrag_coeff.F; fi
if [ ! -L mom_u_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_coriolis_nh.F mom_u_coriolis_nh.F; fi
if [ ! -L mom_u_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_implicit_r.F mom_u_implicit_r.F; fi
if [ ! -L mom_u_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_metric_nh.F mom_u_metric_nh.F; fi
if [ ! -L mom_u_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_rviscflux.F mom_u_rviscflux.F; fi
if [ ! -L mom_u_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_sidedrag.F mom_u_sidedrag.F; fi
if [ ! -L mom_uv_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_uv_smag_3d.F mom_uv_smag_3d.F; fi
if [ ! -L mom_v_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_botdrag_coeff.F mom_v_botdrag_coeff.F; fi
if [ ! -L mom_v_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_coriolis_nh.F mom_v_coriolis_nh.F; fi
if [ ! -L mom_v_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_implicit_r.F mom_v_implicit_r.F; fi
if [ ! -L mom_visc_qgl_limit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_limit.F mom_visc_qgl_limit.F; fi
if [ ! -L mom_visc_qgl_stretch.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_stretch.F mom_visc_qgl_stretch.F; fi
if [ ! -L mom_v_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_metric_nh.F mom_v_metric_nh.F; fi
if [ ! -L mom_v_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_rviscflux.F mom_v_rviscflux.F; fi
if [ ! -L mom_v_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_sidedrag.F mom_v_sidedrag.F; fi
if [ ! -L mom_w_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_coriolis_nh.F mom_w_coriolis_nh.F; fi
if [ ! -L mom_w_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_metric_nh.F mom_w_metric_nh.F; fi
if [ ! -L mom_w_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_sidedrag.F mom_w_sidedrag.F; fi
if [ ! -L mom_w_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_smag_3d.F mom_w_smag_3d.F; fi
if [ ! -L mom_calc_rtrans.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_calc_rtrans.F mom_calc_rtrans.F; fi
if [ ! -L mom_fluxform.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_fluxform.F mom_fluxform.F; fi
if [ ! -L mom_u_adv_uu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_uu.F mom_u_adv_uu.F; fi
if [ ! -L mom_u_adv_vu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_vu.F mom_u_adv_vu.F; fi
if [ ! -L mom_u_adv_wu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_wu.F mom_u_adv_wu.F; fi
if [ ! -L mom_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_coriolis.F mom_u_coriolis.F; fi
if [ ! -L mom_u_del2u.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_del2u.F mom_u_del2u.F; fi
if [ ! -L mom_u_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_cylinder.F mom_u_metric_cylinder.F; fi
if [ ! -L mom_u_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_sphere.F mom_u_metric_sphere.F; fi
if [ ! -L mom_uv_boundary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_uv_boundary.F mom_uv_boundary.F; fi
if [ ! -L mom_u_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_xviscflux.F mom_u_xviscflux.F; fi
if [ ! -L mom_u_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_yviscflux.F mom_u_yviscflux.F; fi
if [ ! -L mom_v_adv_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_uv.F mom_v_adv_uv.F; fi
if [ ! -L mom_v_adv_vv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_vv.F mom_v_adv_vv.F; fi
if [ ! -L mom_v_adv_wv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_wv.F mom_v_adv_wv.F; fi
if [ ! -L mom_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_coriolis.F mom_v_coriolis.F; fi
if [ ! -L mom_v_del2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_del2v.F mom_v_del2v.F; fi
if [ ! -L mom_v_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_cylinder.F mom_v_metric_cylinder.F; fi
if [ ! -L mom_v_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_sphere.F mom_v_metric_sphere.F; fi
if [ ! -L mom_v_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_xviscflux.F mom_v_xviscflux.F; fi
if [ ! -L mom_v_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_yviscflux.F mom_v_yviscflux.F; fi
if [ ! -L mom_vecinv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vecinv.F mom_vecinv.F; fi
if [ ! -L mom_vi_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_coriolis.F mom_vi_coriolis.F; fi
if [ ! -L mom_vi_del2uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_del2uv.F mom_vi_del2uv.F; fi
if [ ! -L mom_vi_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_hdissip.F mom_vi_hdissip.F; fi
if [ ! -L mom_vi_u_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F mom_vi_u_coriolis_c4.F; fi
if [ ! -L mom_vi_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis.F mom_vi_u_coriolis.F; fi
if [ ! -L mom_vi_u_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_grad_ke.F mom_vi_u_grad_ke.F; fi
if [ ! -L mom_vi_u_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_vertshear.F mom_vi_u_vertshear.F; fi
if [ ! -L mom_vi_v_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F mom_vi_v_coriolis_c4.F; fi
if [ ! -L mom_vi_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis.F mom_vi_v_coriolis.F; fi
if [ ! -L mom_vi_v_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_grad_ke.F mom_vi_v_grad_ke.F; fi
if [ ! -L mom_vi_v_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_vertshear.F mom_vi_v_vertshear.F; fi
if [ ! -L mon_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcfl.F mon_advcfl.F; fi
if [ ! -L mon_advcflw2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw2.F mon_advcflw2.F; fi
if [ ! -L mon_advcflw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw.F mon_advcflw.F; fi
if [ ! -L mon_calc_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_advcfl.F mon_calc_advcfl.F; fi
if [ ! -L mon_calc_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rl.F mon_calc_stats_rl.F; fi
if [ ! -L mon_calc_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rs.F mon_calc_stats_rs.F; fi
if [ ! -L mon_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_init.F mon_init.F; fi
if [ ! -L monitor_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_ad.F monitor_ad.F; fi
if [ ! -L monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor.F monitor.F; fi
if [ ! -L monitor_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_g.F monitor_g.F; fi
if [ ! -L mon_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_ke.F mon_ke.F; fi
if [ ! -L mon_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_out.F mon_out.F; fi
if [ ! -L mon_printstats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rl.F mon_printstats_rl.F; fi
if [ ! -L mon_printstats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rs.F mon_printstats_rs.F; fi
if [ ! -L mon_set_iounit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_iounit.F mon_set_iounit.F; fi
if [ ! -L mon_set_pref.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_pref.F mon_set_pref.F; fi
if [ ! -L mon_solution.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_solution.F mon_solution.F; fi
if [ ! -L mon_stats_latbnd_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_latbnd_rl.F mon_stats_latbnd_rl.F; fi
if [ ! -L mon_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rl.F mon_stats_rl.F; fi
if [ ! -L mon_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rs.F mon_stats_rs.F; fi
if [ ! -L mon_surfcor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_surfcor.F mon_surfcor.F; fi
if [ ! -L mon_vort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_vort3.F mon_vort3.F; fi
if [ ! -L mon_writestats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rl.F mon_writestats_rl.F; fi
if [ ! -L mon_writestats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rs.F mon_writestats_rs.F; fi
if [ ! -L obcs_add_tides.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_add_tides.F obcs_add_tides.F; fi
if [ ! -L obcs_adjust.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust.F obcs_adjust.F; fi
if [ ! -L obcs_adjust_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust_uvice.F obcs_adjust_uvice.F; fi
if [ ! -L obcs_apply_eta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_eta.F obcs_apply_eta.F; fi
if [ ! -L obcs_apply_ptracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ptracer.F obcs_apply_ptracer.F; fi
if [ ! -L obcs_apply_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_r_star.F obcs_apply_r_star.F; fi
if [ ! -L obcs_apply_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_seaice.F obcs_apply_seaice.F; fi
if [ ! -L obcs_apply_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_surf_dr.F obcs_apply_surf_dr.F; fi
if [ ! -L obcs_apply_ts.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ts.F obcs_apply_ts.F; fi
if [ ! -L obcs_apply_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uv.F obcs_apply_uv.F; fi
if [ ! -L obcs_apply_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uvice.F obcs_apply_uvice.F; fi
if [ ! -L obcs_apply_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_w.F obcs_apply_w.F; fi
if [ ! -L obcs_balance_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_balance_flow.F obcs_balance_flow.F; fi
if [ ! -L obcs_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc.F obcs_calc.F; fi
if [ ! -L obcs_calc_stevens.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc_stevens.F obcs_calc_stevens.F; fi
if [ ! -L obcs_check_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check_depths.F obcs_check_depths.F; fi
if [ ! -L obcs_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check.F obcs_check.F; fi
if [ ! -L obcs_copy_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_tracer.F obcs_copy_tracer.F; fi
if [ ! -L obcs_copy_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_uv_n.F obcs_copy_uv_n.F; fi
if [ ! -L obcs_diag_balance.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_diag_balance.F obcs_diag_balance.F; fi
if [ ! -L obcs_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exchanges.F obcs_exchanges.F; fi
if [ ! -L obcs_exf_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exf_load.F obcs_exf_load.F; fi
if [ ! -L obcs_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_fields_load.F obcs_fields_load.F; fi
if [ ! -L obcs_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_fixed.F obcs_init_fixed.F; fi
if [ ! -L obcs_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_variables.F obcs_init_variables.F; fi
if [ ! -L obcs_monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_monitor.F obcs_monitor.F; fi
if [ ! -L obcs_mon_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_mon_stats.F obcs_mon_stats.F; fi
if [ ! -L obcs_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_output.F obcs_output.F; fi
if [ ! -L obcs_prescribe_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_prescribe_read.F obcs_prescribe_read.F; fi
if [ ! -L obcs_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_readparms.F obcs_readparms.F; fi
if [ ! -L obcs_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_read_pickup.F obcs_read_pickup.F; fi
if [ ! -L obcs_save_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_save_uv_n.F obcs_save_uv_n.F; fi
if [ ! -L obcs_seaice_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_seaice_sponge.F obcs_seaice_sponge.F; fi
if [ ! -L obcs_set_connect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_set_connect.F obcs_set_connect.F; fi
if [ ! -L obcs_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_sponge.F obcs_sponge.F; fi
if [ ! -L obcs_u1_adv_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_u1_adv_tracer.F obcs_u1_adv_tracer.F; fi
if [ ! -L obcs_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_write_pickup.F obcs_write_pickup.F; fi
if [ ! -L orlanski_east.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_east.F orlanski_east.F; fi
if [ ! -L orlanski_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_init.F orlanski_init.F; fi
if [ ! -L orlanski_north.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_north.F orlanski_north.F; fi
if [ ! -L orlanski_south.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_south.F orlanski_south.F; fi
if [ ! -L orlanski_west.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_west.F orlanski_west.F; fi
if [ ! -L get_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/get_write_global_fld.F get_write_global_fld.F; fi
if [ ! -L read_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rl.F read_fld_xy_rl.F; fi
if [ ! -L read_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rs.F read_fld_xy_rs.F; fi
if [ ! -L read_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rl.F read_fld_xyz_rl.F; fi
if [ ! -L read_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rs.F read_fld_xyz_rs.F; fi
if [ ! -L read_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rl.F read_glvec_rl.F; fi
if [ ! -L read_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rs.F read_glvec_rs.F; fi
if [ ! -L read_mflds.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_mflds.F read_mflds.F; fi
if [ ! -L read_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_rec.F read_rec.F; fi
if [ ! -L rw_get_suffix.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/rw_get_suffix.F rw_get_suffix.F; fi
if [ ! -L set_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/set_write_global_fld.F set_write_global_fld.F; fi
if [ ! -L write_fld_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rl.F write_fld_3d_rl.F; fi
if [ ! -L write_fld_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rs.F write_fld_3d_rs.F; fi
if [ ! -L write_fld_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rl.F write_fld_s3d_rl.F; fi
if [ ! -L write_fld_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rs.F write_fld_s3d_rs.F; fi
if [ ! -L write_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rl.F write_fld_xy_rl.F; fi
if [ ! -L write_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rs.F write_fld_xy_rs.F; fi
if [ ! -L write_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rl.F write_fld_xyz_rl.F; fi
if [ ! -L write_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rs.F write_fld_xyz_rs.F; fi
if [ ! -L write_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rl.F write_glvec_rl.F; fi
if [ ! -L write_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rs.F write_glvec_rs.F; fi
if [ ! -L write_local_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rl.F write_local_rl.F; fi
if [ ! -L write_local_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rs.F write_local_rs.F; fi
if [ ! -L write_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_rec.F write_rec.F; fi
if [ ! -L shelfice_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_check.F shelfice_check.F; fi
if [ ! -L shelfice_cost_accumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_accumulate.F shelfice_cost_accumulate.F; fi
if [ ! -L shelfice_cost_final.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_final.F shelfice_cost_final.F; fi
if [ ! -L shelfice_cost_shifwflx.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_shifwflx.F shelfice_cost_shifwflx.F; fi
if [ ! -L shelfice_diagnostics_drag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_diagnostics_drag.F shelfice_diagnostics_drag.F; fi
if [ ! -L shelfice_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing.F shelfice_forcing.F; fi
if [ ! -L shelfice_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing_surf.F shelfice_forcing_surf.F; fi
if [ ! -L shelfice_init_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_depths.F shelfice_init_depths.F; fi
if [ ! -L shelfice_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_fixed.F shelfice_init_fixed.F; fi
if [ ! -L shelfice_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_varia.F shelfice_init_varia.F; fi
if [ ! -L shelfice_mask_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mask_seaice.F shelfice_mask_seaice.F; fi
if [ ! -L shelfice_mnc_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mnc_init.F shelfice_mnc_init.F; fi
if [ ! -L shelfice_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_output.F shelfice_output.F; fi
if [ ! -L shelfice_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_readparms.F shelfice_readparms.F; fi
if [ ! -L shelfice_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_read_pickup.F shelfice_read_pickup.F; fi
if [ ! -L shelfice_remesh_calc_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_calc_w.F shelfice_remesh_calc_w.F; fi
if [ ! -L shelfice_remesh_c_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_c_mask.F shelfice_remesh_c_mask.F; fi
if [ ! -L shelfice_remeshing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remeshing.F shelfice_remeshing.F; fi
if [ ! -L shelfice_remesh_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_state.F shelfice_remesh_state.F; fi
if [ ! -L shelfice_remesh_uv_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_uv_mask.F shelfice_remesh_uv_mask.F; fi
if [ ! -L shelfice_step_icemass.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_step_icemass.F shelfice_step_icemass.F; fi
if [ ! -L shelfice_thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_thermodynamics.F shelfice_thermodynamics.F; fi
if [ ! -L shelfice_u_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_u_drag_coeff.F shelfice_u_drag_coeff.F; fi
if [ ! -L shelfice_v_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_v_drag_coeff.F shelfice_v_drag_coeff.F; fi
if [ ! -L shelfice_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_write_pickup.F shelfice_write_pickup.F; fi
if [ ! -L timeave_cumul_1k1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1k1t.F timeave_cumul_1k1t.F; fi
if [ ! -L timeave_cumul_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1t.F timeave_cumul_1t.F; fi
if [ ! -L timeave_cumul_1vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1vfc.F timeave_cumul_1vfc.F; fi
if [ ! -L timeave_cumul_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2v.F timeave_cumul_2v.F; fi
if [ ! -L timeave_cumul_2vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2vfc.F timeave_cumul_2vfc.F; fi
if [ ! -L timeave_cumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumulate.F timeave_cumulate.F; fi
if [ ! -L timeave_cumul_dif_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_dif_1t.F timeave_cumul_dif_1t.F; fi
if [ ! -L timeave_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_init_fixed.F timeave_init_fixed.F; fi
if [ ! -L timeave_norma_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_norma_2v.F timeave_norma_2v.F; fi
if [ ! -L timeave_normalize.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_normalize.F timeave_normalize.F; fi
if [ ! -L timeave_reset.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_reset.F timeave_reset.F; fi
if [ ! -L timeave_statvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statvars.F timeave_statvars.F; fi
if [ ! -L timeave_statv_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statv_write.F timeave_statv_write.F; fi
if [ ! -L timeave_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_surf_flux.F timeave_surf_flux.F; fi
if [ ! -L all_proc_die.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/all_proc_die.F all_proc_die.F; fi
if [ ! -L bar2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar2.F bar2.F; fi
if [ ! -L bar_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar_check.F bar_check.F; fi
if [ ! -L barrier.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/barrier.F barrier.F; fi
if [ ! -L check_threads.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/check_threads.F check_threads.F; fi
if [ ! -L comm_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/comm_stats.F comm_stats.F; fi
if [ ! -L cumulsum_z_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/cumulsum_z_tile.F cumulsum_z_tile.F; fi
if [ ! -L different_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/different_multiple.F different_multiple.F; fi
if [ ! -L diff_phase_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/diff_phase_multiple.F diff_phase_multiple.F; fi
if [ ! -L eeboot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeboot.F eeboot.F; fi
if [ ! -L eedata_example.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eedata_example.F eedata_example.F; fi
if [ ! -L eeintro_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeintro_msg.F eeintro_msg.F; fi
if [ ! -L eeset_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeset_parms.F eeset_parms.F; fi
if [ ! -L eewrite_eeenv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eewrite_eeenv.F eewrite_eeenv.F; fi
if [ ! -L exch0_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r4.F exch0_r4.F; fi
if [ ! -L exch0_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r8.F exch0_r8.F; fi
if [ ! -L exch0_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rl.F exch0_rl.F; fi
if [ ! -L exch0_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rs.F exch0_rs.F; fi
if [ ! -L exch1_bg_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r4_cube.F exch1_bg_r4_cube.F; fi
if [ ! -L exch1_bg_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r8_cube.F exch1_bg_r8_cube.F; fi
if [ ! -L exch1_bg_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rl_cube.F exch1_bg_rl_cube.F; fi
if [ ! -L exch1_bg_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rs_cube.F exch1_bg_rs_cube.F; fi
if [ ! -L exch1_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4_cube.F exch1_r4_cube.F; fi
if [ ! -L exch1_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4.F exch1_r4.F; fi
if [ ! -L exch1_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8_cube.F exch1_r8_cube.F; fi
if [ ! -L exch1_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8.F exch1_r8.F; fi
if [ ! -L exch1_rl_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_ad.F exch1_rl_ad.F; fi
if [ ! -L exch1_rl_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube_ad.F exch1_rl_cube_ad.F; fi
if [ ! -L exch1_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube.F exch1_rl_cube.F; fi
if [ ! -L exch1_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl.F exch1_rl.F; fi
if [ ! -L exch1_rs_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_ad.F exch1_rs_ad.F; fi
if [ ! -L exch1_rs_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube_ad.F exch1_rs_cube_ad.F; fi
if [ ! -L exch1_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube.F exch1_rs_cube.F; fi
if [ ! -L exch1_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs.F exch1_rs.F; fi
if [ ! -L exch1_uv_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r4_cube.F exch1_uv_r4_cube.F; fi
if [ ! -L exch1_uv_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r8_cube.F exch1_uv_r8_cube.F; fi
if [ ! -L exch1_uv_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rl_cube.F exch1_uv_rl_cube.F; fi
if [ ! -L exch1_uv_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rs_cube.F exch1_uv_rs_cube.F; fi
if [ ! -L exch1_z_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r4_cube.F exch1_z_r4_cube.F; fi
if [ ! -L exch1_z_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r8_cube.F exch1_z_r8_cube.F; fi
if [ ! -L exch1_z_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rl_cube.F exch1_z_rl_cube.F; fi
if [ ! -L exch1_z_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rs_cube.F exch1_z_rs_cube.F; fi
if [ ! -L exch_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r4.F exch_3d_r4.F; fi
if [ ! -L exch_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r8.F exch_3d_r8.F; fi
if [ ! -L exch_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rl.F exch_3d_rl.F; fi
if [ ! -L exch_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rs.F exch_3d_rs.F; fi
if [ ! -L exch_cycle_ebl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_cycle_ebl.F exch_cycle_ebl.F; fi
if [ ! -L exch_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_init.F exch_init.F; fi
if [ ! -L exch_r4_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_x.F exch_r4_recv_get_x.F; fi
if [ ! -L exch_r4_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_y.F exch_r4_recv_get_y.F; fi
if [ ! -L exch_r4_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_x.F exch_r4_send_put_x.F; fi
if [ ! -L exch_r4_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_y.F exch_r4_send_put_y.F; fi
if [ ! -L exch_r8_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_x.F exch_r8_recv_get_x.F; fi
if [ ! -L exch_r8_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_y.F exch_r8_recv_get_y.F; fi
if [ ! -L exch_r8_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_x.F exch_r8_send_put_x.F; fi
if [ ! -L exch_r8_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_y.F exch_r8_send_put_y.F; fi
if [ ! -L exch_rl_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_x.F exch_rl_recv_get_x.F; fi
if [ ! -L exch_rl_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_y.F exch_rl_recv_get_y.F; fi
if [ ! -L exch_rl_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_x.F exch_rl_send_put_x.F; fi
if [ ! -L exch_rl_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_y.F exch_rl_send_put_y.F; fi
if [ ! -L exch_rs_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_x.F exch_rs_recv_get_x.F; fi
if [ ! -L exch_rs_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_y.F exch_rs_recv_get_y.F; fi
if [ ! -L exch_rs_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_x.F exch_rs_send_put_x.F; fi
if [ ! -L exch_rs_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_y.F exch_rs_send_put_y.F; fi
if [ ! -L exch_s3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r4.F exch_s3d_r4.F; fi
if [ ! -L exch_s3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r8.F exch_s3d_r8.F; fi
if [ ! -L exch_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rl.F exch_s3d_rl.F; fi
if [ ! -L exch_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rs.F exch_s3d_rs.F; fi
if [ ! -L exch_sm_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r4.F exch_sm_3d_r4.F; fi
if [ ! -L exch_sm_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r8.F exch_sm_3d_r8.F; fi
if [ ! -L exch_sm_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rl.F exch_sm_3d_rl.F; fi
if [ ! -L exch_sm_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rs.F exch_sm_3d_rs.F; fi
if [ ! -L exch_uv_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r4.F exch_uv_3d_r4.F; fi
if [ ! -L exch_uv_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r8.F exch_uv_3d_r8.F; fi
if [ ! -L exch_uv_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rl.F exch_uv_3d_rl.F; fi
if [ ! -L exch_uv_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rs.F exch_uv_3d_rs.F; fi
if [ ! -L exch_uv_agrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r4.F; fi
if [ ! -L exch_uv_agrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_r8.F; fi
if [ ! -L exch_uv_agrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rl.F; fi
if [ ! -L exch_uv_agrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rs.F exch_uv_agrid_3d_rs.F; fi
if [ ! -L exch_uv_bgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r4.F; fi
if [ ! -L exch_uv_bgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_r8.F; fi
if [ ! -L exch_uv_bgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rl.F; fi
if [ ! -L exch_uv_bgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rs.F exch_uv_bgrid_3d_rs.F; fi
if [ ! -L exch_uv_dgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r4.F; fi
if [ ! -L exch_uv_dgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_r8.F; fi
if [ ! -L exch_uv_dgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rl.F; fi
if [ ! -L exch_uv_dgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rs.F exch_uv_dgrid_3d_rs.F; fi
if [ ! -L exch_uv_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r4.F exch_uv_xy_r4.F; fi
if [ ! -L exch_uv_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r8.F exch_uv_xy_r8.F; fi
if [ ! -L exch_uv_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rl.F exch_uv_xy_rl.F; fi
if [ ! -L exch_uv_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rs.F exch_uv_xy_rs.F; fi
if [ ! -L exch_uv_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r4.F exch_uv_xyz_r4.F; fi
if [ ! -L exch_uv_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r8.F exch_uv_xyz_r8.F; fi
if [ ! -L exch_uv_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rl.F exch_uv_xyz_rl.F; fi
if [ ! -L exch_uv_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rs.F exch_uv_xyz_rs.F; fi
if [ ! -L exch_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r4.F exch_xy_r4.F; fi
if [ ! -L exch_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r8.F exch_xy_r8.F; fi
if [ ! -L exch_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rl.F exch_xy_rl.F; fi
if [ ! -L exch_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rs.F exch_xy_rs.F; fi
if [ ! -L exch_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r4.F exch_xyz_r4.F; fi
if [ ! -L exch_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r8.F exch_xyz_r8.F; fi
if [ ! -L exch_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rl.F exch_xyz_rl.F; fi
if [ ! -L exch_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rs.F exch_xyz_rs.F; fi
if [ ! -L exch_z_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r4.F exch_z_3d_r4.F; fi
if [ ! -L exch_z_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r8.F exch_z_3d_r8.F; fi
if [ ! -L exch_z_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rl.F exch_z_3d_rl.F; fi
if [ ! -L exch_z_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rs.F exch_z_3d_rs.F; fi
if [ ! -L fill_cs_corner_ag_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_ag_rl.F fill_cs_corner_ag_rl.F; fi
if [ ! -L fill_cs_corner_tr_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_tr_rl.F fill_cs_corner_tr_rl.F; fi
if [ ! -L fill_cs_corner_uv_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rl.F fill_cs_corner_uv_rl.F; fi
if [ ! -L fill_cs_corner_uv_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rs.F fill_cs_corner_uv_rs.F; fi
if [ ! -L fool_the_compiler.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fool_the_compiler.F fool_the_compiler.F; fi
if [ ! -L gather_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r4.F gather_2d_r4.F; fi
if [ ! -L gather_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r8.F gather_2d_r8.F; fi
if [ ! -L gather_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r4.F gather_2d_wh_r4.F; fi
if [ ! -L gather_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r8.F gather_2d_wh_r8.F; fi
if [ ! -L gather_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r4.F gather_vec_r4.F; fi
if [ ! -L gather_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r8.F gather_vec_r8.F; fi
if [ ! -L gather_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_xz.F gather_xz.F; fi
if [ ! -L gather_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_yz.F gather_yz.F; fi
if [ ! -L get_periodic_interval.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/get_periodic_interval.F get_periodic_interval.F; fi
if [ ! -L global_max.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_max.F global_max.F; fi
if [ ! -L global_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum.F global_sum.F; fi
if [ ! -L global_sum_singlecpu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_singlecpu.F global_sum_singlecpu.F; fi
if [ ! -L global_sum_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_tile.F global_sum_tile.F; fi
if [ ! -L global_vec_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_vec_sum.F global_vec_sum.F; fi
if [ ! -L gsum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsum.F gsum.F; fi
if [ ! -L ini_communication_patterns.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_communication_patterns.F ini_communication_patterns.F; fi
if [ ! -L ini_procs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_procs.F ini_procs.F; fi
if [ ! -L ini_threading_environment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_threading_environment.F ini_threading_environment.F; fi
if [ ! -L lef_zero.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/lef_zero.F lef_zero.F; fi
if [ ! -L main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/main.F main.F; fi
if [ ! -L master_cpu_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_io.F master_cpu_io.F; fi
if [ ! -L master_cpu_thread.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_thread.F master_cpu_thread.F; fi
if [ ! -L mds_byteswapi4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapi4.F mds_byteswapi4.F; fi
if [ ! -L mds_byteswapr4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr4.F mds_byteswapr4.F; fi
if [ ! -L mds_byteswapr8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr8.F mds_byteswapr8.F; fi
if [ ! -L mdsfindunit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mdsfindunit.F mdsfindunit.F; fi
if [ ! -L mds_flush.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_flush.F mds_flush.F; fi
if [ ! -L mds_reclen.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_reclen.F mds_reclen.F; fi
if [ ! -L memsync.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/memsync.F memsync.F; fi
if [ ! -L nml_change_syntax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_change_syntax.F nml_change_syntax.F; fi
if [ ! -L nml_set_terminator.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_set_terminator.F nml_set_terminator.F; fi
if [ ! -L open_copy_data_file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/open_copy_data_file.F open_copy_data_file.F; fi
if [ ! -L print.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/print.F print.F; fi
if [ ! -L reset_halo.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/reset_halo.F reset_halo.F; fi
if [ ! -L scatter_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r4.F scatter_2d_r4.F; fi
if [ ! -L scatter_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r8.F scatter_2d_r8.F; fi
if [ ! -L scatter_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r4.F scatter_2d_wh_r4.F; fi
if [ ! -L scatter_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r8.F scatter_2d_wh_r8.F; fi
if [ ! -L scatter_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r4.F scatter_vec_r4.F; fi
if [ ! -L scatter_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r8.F scatter_vec_r8.F; fi
if [ ! -L scatter_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_xz.F scatter_xz.F; fi
if [ ! -L scatter_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_yz.F scatter_yz.F; fi
if [ ! -L stop_if_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/stop_if_error.F stop_if_error.F; fi
if [ ! -L timers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timers.F timers.F; fi
if [ ! -L utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/utils.F utils.F; fi
if [ ! -L write_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/write_utils.F write_utils.F; fi
if [ ! -L adams_bashforth2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth2.F adams_bashforth2.F; fi
if [ ! -L adams_bashforth3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth3.F adams_bashforth3.F; fi
if [ ! -L add_walls2masks.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/add_walls2masks.F add_walls2masks.F; fi
if [ ! -L apply_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/apply_forcing.F apply_forcing.F; fi
if [ ! -L calc_3d_diffusivity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_3d_diffusivity.F calc_3d_diffusivity.F; fi
if [ ! -L calc_adv_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_adv_flow.F calc_adv_flow.F; fi
if [ ! -L calc_div_ghat.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_div_ghat.F calc_div_ghat.F; fi
if [ ! -L calc_eddy_stress.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_eddy_stress.F calc_eddy_stress.F; fi
if [ ! -L calc_grad_phi_fv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_fv.F calc_grad_phi_fv.F; fi
if [ ! -L calc_grad_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_hyd.F calc_grad_phi_hyd.F; fi
if [ ! -L calc_grad_phi_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_surf.F calc_grad_phi_surf.F; fi
if [ ! -L calc_grid_angles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grid_angles.F calc_grid_angles.F; fi
if [ ! -L calc_gw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_gw.F calc_gw.F; fi
if [ ! -L calc_ivdc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_ivdc.F calc_ivdc.F; fi
if [ ! -L calc_oce_mxlayer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_oce_mxlayer.F calc_oce_mxlayer.F; fi
if [ ! -L calc_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_phi_hyd.F calc_phi_hyd.F; fi
if [ ! -L calc_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_r_star.F calc_r_star.F; fi
if [ ! -L calc_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_surf_dr.F calc_surf_dr.F; fi
if [ ! -L calc_viscosity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_viscosity.F calc_viscosity.F; fi
if [ ! -L calc_wsurf_tr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_wsurf_tr.F calc_wsurf_tr.F; fi
if [ ! -L cg2d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_ex0.F cg2d_ex0.F; fi
if [ ! -L cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d.F cg2d.F; fi
if [ ! -L cg2d_nsa.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_nsa.F cg2d_nsa.F; fi
if [ ! -L cg2d_sr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_sr.F cg2d_sr.F; fi
if [ ! -L cg3d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d_ex0.F cg3d_ex0.F; fi
if [ ! -L cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d.F cg3d.F; fi
if [ ! -L check_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/check_pickup.F check_pickup.F; fi
if [ ! -L config_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_check.F config_check.F; fi
if [ ! -L config_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_summary.F config_summary.F; fi
if [ ! -L convective_adjustment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment.F convective_adjustment.F; fi
if [ ! -L convective_adjustment_ini.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment_ini.F convective_adjustment_ini.F; fi
if [ ! -L convectively_mixtracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convectively_mixtracer.F convectively_mixtracer.F; fi
if [ ! -L convective_weights.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_weights.F convective_weights.F; fi
if [ ! -L correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/correction_step.F correction_step.F; fi
if [ ! -L cycle_ab_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_ab_tracer.F cycle_ab_tracer.F; fi
if [ ! -L cycle_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_tracer.F cycle_tracer.F; fi
if [ ! -L diags_oceanic_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_oceanic_surf_flux.F diags_oceanic_surf_flux.F; fi
if [ ! -L diags_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_hyd.F diags_phi_hyd.F; fi
if [ ! -L diags_phi_rlow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_rlow.F diags_phi_rlow.F; fi
if [ ! -L diags_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_rho.F diags_rho.F; fi
if [ ! -L diags_sound_speed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_sound_speed.F diags_sound_speed.F; fi
if [ ! -L do_atmospheric_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_atmospheric_phys.F do_atmospheric_phys.F; fi
if [ ! -L do_fields_blocking_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_fields_blocking_exchanges.F do_fields_blocking_exchanges.F; fi
if [ ! -L do_stagger_fields_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_stagger_fields_exchanges.F do_stagger_fields_exchanges.F; fi
if [ ! -L do_statevars_diags.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_diags.F do_statevars_diags.F; fi
if [ ! -L do_statevars_tave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_tave.F do_statevars_tave.F; fi
if [ ! -L do_the_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_the_model_io.F do_the_model_io.F; fi
if [ ! -L do_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_write_pickup.F do_write_pickup.F; fi
if [ ! -L dynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/dynamics.F dynamics.F; fi
if [ ! -L external_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_fields_load.F external_fields_load.F; fi
if [ ! -L external_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing.F external_forcing.F; fi
if [ ! -L external_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing_surf.F external_forcing_surf.F; fi
if [ ! -L find_alpha.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_alpha.F find_alpha.F; fi
if [ ! -L find_hyd_press_1d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_hyd_press_1d.F find_hyd_press_1d.F; fi
if [ ! -L find_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_rho.F find_rho.F; fi
if [ ! -L forcing_surf_relax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forcing_surf_relax.F forcing_surf_relax.F; fi
if [ ! -L forward_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forward_step.F forward_step.F; fi
if [ ! -L freesurf_rescale_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freesurf_rescale_g.F freesurf_rescale_g.F; fi
if [ ! -L freeze_surface.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freeze_surface.F freeze_surface.F; fi
if [ ! -L grad_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/grad_sigma.F grad_sigma.F; fi
if [ ! -L gsw_teos10.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/gsw_teos10.F gsw_teos10.F; fi
if [ ! -L impldiff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/impldiff.F impldiff.F; fi
if [ ! -L ini_cartesian_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cartesian_grid.F ini_cartesian_grid.F; fi
if [ ! -L ini_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg2d.F ini_cg2d.F; fi
if [ ! -L ini_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg3d.F ini_cg3d.F; fi
if [ ! -L ini_cori.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cori.F ini_cori.F; fi
if [ ! -L ini_curvilinear_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_curvilinear_grid.F ini_curvilinear_grid.F; fi
if [ ! -L ini_cylinder_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cylinder_grid.F ini_cylinder_grid.F; fi
if [ ! -L ini_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_depths.F ini_depths.F; fi
if [ ! -L ini_dynvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_dynvars.F ini_dynvars.F; fi
if [ ! -L ini_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_eos.F ini_eos.F; fi
if [ ! -L ini_ffields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_ffields.F ini_ffields.F; fi
if [ ! -L ini_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_fields.F ini_fields.F; fi
if [ ! -L ini_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_forcing.F ini_forcing.F; fi
if [ ! -L ini_global_domain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_global_domain.F ini_global_domain.F; fi
if [ ! -L ini_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_grid.F ini_grid.F; fi
if [ ! -L ini_linear_phisurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_linear_phisurf.F ini_linear_phisurf.F; fi
if [ ! -L ini_local_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_local_grid.F ini_local_grid.F; fi
if [ ! -L ini_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_masks_etc.F ini_masks_etc.F; fi
if [ ! -L ini_mixing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mixing.F ini_mixing.F; fi
if [ ! -L ini_mnc_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mnc_vars.F ini_mnc_vars.F; fi
if [ ! -L ini_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_model_io.F ini_model_io.F; fi
if [ ! -L ini_nh_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_fields.F ini_nh_fields.F; fi
if [ ! -L ini_nh_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_vars.F ini_nh_vars.F; fi
if [ ! -L ini_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nlfs_vars.F ini_nlfs_vars.F; fi
if [ ! -L ini_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_parms.F ini_parms.F; fi
if [ ! -L ini_p_ground.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_p_ground.F ini_p_ground.F; fi
if [ ! -L ini_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_pressure.F ini_pressure.F; fi
if [ ! -L ini_psurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_psurf.F ini_psurf.F; fi
if [ ! -L ini_salt.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_salt.F ini_salt.F; fi
if [ ! -L ini_sigma_hfac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_sigma_hfac.F ini_sigma_hfac.F; fi
if [ ! -L ini_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_spherical_polar_grid.F ini_spherical_polar_grid.F; fi
if [ ! -L ini_theta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_theta.F ini_theta.F; fi
if [ ! -L initialise_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_fixed.F initialise_fixed.F; fi
if [ ! -L initialise_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_varia.F initialise_varia.F; fi
if [ ! -L ini_vel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vel.F ini_vel.F; fi
if [ ! -L ini_vertical_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vertical_grid.F ini_vertical_grid.F; fi
if [ ! -L integrate_for_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integrate_for_w.F integrate_for_w.F; fi
if [ ! -L integr_continuity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integr_continuity.F integr_continuity.F; fi
if [ ! -L load_fields_driver.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_fields_driver.F load_fields_driver.F; fi
if [ ! -L load_grid_spacing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_grid_spacing.F load_grid_spacing.F; fi
if [ ! -L load_ref_files.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_ref_files.F load_ref_files.F; fi
if [ ! -L main_do_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/main_do_loop.F main_do_loop.F; fi
if [ ! -L momentum_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/momentum_correction_step.F momentum_correction_step.F; fi
if [ ! -L packages_boot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_boot.F packages_boot.F; fi
if [ ! -L packages_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_check.F packages_check.F; fi
if [ ! -L packages_error_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_error_msg.F packages_error_msg.F; fi
if [ ! -L packages_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_fixed.F packages_init_fixed.F; fi
if [ ! -L packages_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_variables.F packages_init_variables.F; fi
if [ ! -L packages_print_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_print_msg.F packages_print_msg.F; fi
if [ ! -L packages_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_readparms.F packages_readparms.F; fi
if [ ! -L packages_unused_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_unused_msg.F packages_unused_msg.F; fi
if [ ! -L packages_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_write_pickup.F packages_write_pickup.F; fi
if [ ! -L plot_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/plot_field.F plot_field.F; fi
if [ ! -L port_rand.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/port_rand.F port_rand.F; fi
if [ ! -L post_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/post_cg3d.F post_cg3d.F; fi
if [ ! -L pre_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pre_cg3d.F pre_cg3d.F; fi
if [ ! -L pressure_for_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pressure_for_eos.F pressure_for_eos.F; fi
if [ ! -L read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/read_pickup.F read_pickup.F; fi
if [ ! -L remove_mean.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/remove_mean.F remove_mean.F; fi
if [ ! -L reset_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/reset_nlfs_vars.F reset_nlfs_vars.F; fi
if [ ! -L rotate_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_spherical_polar_grid.F rotate_spherical_polar_grid.F; fi
if [ ! -L rotate_uv2en.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_uv2en.F rotate_uv2en.F; fi
if [ ! -L salt_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/salt_integrate.F salt_integrate.F; fi
if [ ! -L seawater.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/seawater.F seawater.F; fi
if [ ! -L set_defaults.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_defaults.F set_defaults.F; fi
if [ ! -L set_grid_factors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_grid_factors.F set_grid_factors.F; fi
if [ ! -L set_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_parms.F set_parms.F; fi
if [ ! -L set_ref_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_ref_state.F set_ref_state.F; fi
if [ ! -L solve_for_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_for_pressure.F solve_for_pressure.F; fi
if [ ! -L solve_pentadiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_pentadiagonal.F solve_pentadiagonal.F; fi
if [ ! -L solve_tridiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_tridiagonal.F solve_tridiagonal.F; fi
if [ ! -L solve_uv_tridiago.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_uv_tridiago.F solve_uv_tridiago.F; fi
if [ ! -L state_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/state_summary.F state_summary.F; fi
if [ ! -L swfrac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/swfrac.F swfrac.F; fi
if [ ! -L taueddy_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_init_varia.F taueddy_init_varia.F; fi
if [ ! -L taueddy_tendency_apply.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_tendency_apply.F taueddy_tendency_apply.F; fi
if [ ! -L temp_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/temp_integrate.F temp_integrate.F; fi
if [ ! -L the_main_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_main_loop.F the_main_loop.F; fi
if [ ! -L the_model_main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_model_main.F the_model_main.F; fi
if [ ! -L thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/thermodynamics.F thermodynamics.F; fi
if [ ! -L timestep.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep.F timestep.F; fi
if [ ! -L timestep_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_tracer.F timestep_tracer.F; fi
if [ ! -L timestep_wvel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_wvel.F timestep_wvel.F; fi
if [ ! -L tracers_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_correction_step.F tracers_correction_step.F; fi
if [ ! -L tracers_iigw_correction.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_iigw_correction.F tracers_iigw_correction.F; fi
if [ ! -L turnoff_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/turnoff_model_io.F turnoff_model_io.F; fi
if [ ! -L update_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_cg2d.F update_cg2d.F; fi
if [ ! -L update_etah.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etah.F update_etah.F; fi
if [ ! -L update_etaws.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etaws.F update_etaws.F; fi
if [ ! -L update_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_masks_etc.F update_masks_etc.F; fi
if [ ! -L update_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_r_star.F update_r_star.F; fi
if [ ! -L update_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_sigma.F update_sigma.F; fi
if [ ! -L update_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_surf_dr.F update_surf_dr.F; fi
if [ ! -L write_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_grid.F write_grid.F; fi
if [ ! -L write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_pickup.F write_pickup.F; fi
if [ ! -L write_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_state.F write_state.F; fi
if [ ! -L gsl_ieee_env.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsl_ieee_env.c gsl_ieee_env.c; fi
if [ ! -L ptwrapper.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ptwrapper.c ptwrapper.c; fi
if [ ! -L setdir.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setdir.c setdir.c; fi
if [ ! -L setrlstk.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setrlstk.c setrlstk.c; fi
if [ ! -L sigreg.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/sigreg.c sigreg.c; fi
if [ ! -L tim.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/tim.c tim.c; fi
if [ ! -L timer_stats.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timer_stats.c timer_stats.c; fi
if [ ! -L CPP_EEOPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h CPP_EEOPTIONS.h; fi
if [ ! -L SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/SIZE.h SIZE.h; fi
if [ ! -L DEBUG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/DEBUG_OPTIONS.h DEBUG_OPTIONS.h; fi
if [ ! -L DIAGNOSTICS_CALC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_CALC.h DIAGNOSTICS_CALC.h; fi
if [ ! -L DIAGNOSTICS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS.h DIAGNOSTICS.h; fi
if [ ! -L DIAGNOSTICS_SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_SIZE.h DIAGNOSTICS_SIZE.h; fi
if [ ! -L DIAG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAG_OPTIONS.h DIAG_OPTIONS.h; fi
if [ ! -L DIAGSTATS_REGIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGSTATS_REGIONS.h DIAGSTATS_REGIONS.h; fi
if [ ! -L gad_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev1_dir.h gad_ad_check_lev1_dir.h; fi
if [ ! -L gad_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev2_dir.h gad_ad_check_lev2_dir.h; fi
if [ ! -L gad_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev3_dir.h gad_ad_check_lev3_dir.h; fi
if [ ! -L gad_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev4_dir.h gad_ad_check_lev4_dir.h; fi
if [ ! -L GAD_FLUX_LIMITER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_FLUX_LIMITER.h GAD_FLUX_LIMITER.h; fi
if [ ! -L GAD.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD.h GAD.h; fi
if [ ! -L GAD_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_OPTIONS.h GAD_OPTIONS.h; fi
if [ ! -L GAD_SOM_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_SOM_VARS.h GAD_SOM_VARS.h; fi
if [ ! -L MDSIO_BUFF_3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_3D.h MDSIO_BUFF_3D.h; fi
if [ ! -L MDSIO_BUFF_WH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_WH.h MDSIO_BUFF_WH.h; fi
if [ ! -L MDSIO_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_OPTIONS.h MDSIO_OPTIONS.h; fi
if [ ! -L MOM_COMMON_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_COMMON_OPTIONS.h MOM_COMMON_OPTIONS.h; fi
if [ ! -L MOM_VISC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_VISC.h MOM_VISC.h; fi
if [ ! -L MOM_FLUXFORM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM.h MOM_FLUXFORM.h; fi
if [ ! -L MOM_FLUXFORM_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MOM_FLUXFORM_OPTIONS.h; fi
if [ ! -L MOM_VECINV_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MOM_VECINV_OPTIONS.h; fi
if [ ! -L MONITOR.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR.h MONITOR.h; fi
if [ ! -L MONITOR_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR_OPTIONS.h MONITOR_OPTIONS.h; fi
if [ ! -L obcs_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev1_dir.h obcs_ad_check_lev1_dir.h; fi
if [ ! -L obcs_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev2_dir.h obcs_ad_check_lev2_dir.h; fi
if [ ! -L obcs_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev3_dir.h obcs_ad_check_lev3_dir.h; fi
if [ ! -L obcs_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev4_dir.h obcs_ad_check_lev4_dir.h; fi
if [ ! -L OBCS_FIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_FIELDS.h OBCS_FIELDS.h; fi
if [ ! -L OBCS_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_GRID.h OBCS_GRID.h; fi
if [ ! -L OBCS_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_OPTIONS.h OBCS_OPTIONS.h; fi
if [ ! -L OBCS_PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PARAMS.h OBCS_PARAMS.h; fi
if [ ! -L OBCS_PTRACERS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PTRACERS.h OBCS_PTRACERS.h; fi
if [ ! -L OBCS_SEAICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_SEAICE.h OBCS_SEAICE.h; fi
if [ ! -L ORLANSKI.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/ORLANSKI.h ORLANSKI.h; fi
if [ ! -L RW_MFLDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_MFLDS.h RW_MFLDS.h; fi
if [ ! -L RW_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_OPTIONS.h RW_OPTIONS.h; fi
if [ ! -L shelfice_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev1_dir.h shelfice_ad_check_lev1_dir.h; fi
if [ ! -L shelfice_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev2_dir.h shelfice_ad_check_lev2_dir.h; fi
if [ ! -L shelfice_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev3_dir.h shelfice_ad_check_lev3_dir.h; fi
if [ ! -L shelfice_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev4_dir.h shelfice_ad_check_lev4_dir.h; fi
if [ ! -L SHELFICE_COST.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_COST.h SHELFICE_COST.h; fi
if [ ! -L SHELFICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE.h SHELFICE.h; fi
if [ ! -L SHELFICE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_OPTIONS.h SHELFICE_OPTIONS.h; fi
if [ ! -L SHELFICE_TAVE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_TAVE.h SHELFICE_TAVE.h; fi
if [ ! -L TIMEAVE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_OPTIONS.h TIMEAVE_OPTIONS.h; fi
if [ ! -L TIMEAVE_STATV.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_STATV.h TIMEAVE_STATV.h; fi
if [ ! -L cmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_c.h cmumps_c.h; fi
if [ ! -L cmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_root.h cmumps_root.h; fi
if [ ! -L cmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_struc.h cmumps_struc.h; fi
if [ ! -L dmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_c.h dmumps_c.h; fi
if [ ! -L dmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_root.h dmumps_root.h; fi
if [ ! -L dmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_struc.h dmumps_struc.h; fi
if [ ! -L gklib_defs.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_defs.h gklib_defs.h; fi
if [ ! -L gklib_rename.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_rename.h gklib_rename.h; fi
if [ ! -L gklib_tls.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_tls.h gklib_tls.h; fi
if [ ! -L metis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/metis.h metis.h; fi
if [ ! -L mpicxx.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpicxx.h mpicxx.h; fi
if [ ! -L mpif.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpif.h mpif.h; fi
if [ ! -L mpi.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi.h mpi.h; fi
if [ ! -L mpiof.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpiof.h mpiof.h; fi
if [ ! -L mpio.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpio.h mpio.h; fi
if [ ! -L mpi_proto.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi_proto.h mpi_proto.h; fi
if [ ! -L mumps_compat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_compat.h mumps_compat.h; fi
if [ ! -L mumps_c_types.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_c_types.h mumps_c_types.h; fi
if [ ! -L mumps_int_def.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_int_def.h mumps_int_def.h; fi
if [ ! -L parmetis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/parmetis.h parmetis.h; fi
if [ ! -L petscao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscao.h petscao.h; fi
if [ ! -L petscbag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbag.h petscbag.h; fi
if [ ! -L petscblaslapack.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack.h petscblaslapack.h; fi
if [ ! -L petscblaslapack_mangle.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack_mangle.h petscblaslapack_mangle.h; fi
if [ ! -L petscbt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbt.h petscbt.h; fi
if [ ! -L petsccharacteristic.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccharacteristic.h petsccharacteristic.h; fi
if [ ! -L petscconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf.h petscconf.h; fi
if [ ! -L petscconfiginfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconfiginfo.h petscconfiginfo.h; fi
if [ ! -L petscconf_poison.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf_poison.h petscconf_poison.h; fi
if [ ! -L petscconvest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconvest.h petscconvest.h; fi
if [ ! -L petscctable.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscctable.h petscctable.h; fi
if [ ! -L petsccxxcomplexfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccxxcomplexfix.h petsccxxcomplexfix.h; fi
if [ ! -L petscdevice_cuda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cuda.h petscdevice_cuda.h; fi
if [ ! -L petscdevice_cupm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cupm.h petscdevice_cupm.h; fi
if [ ! -L petscdevice.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice.h petscdevice.h; fi
if [ ! -L petscdevice_hip.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_hip.h petscdevice_hip.h; fi
if [ ! -L petscdevicetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevicetypes.h petscdevicetypes.h; fi
if [ ! -L petscdmadaptor.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptor.h petscdmadaptor.h; fi
if [ ! -L petscdmceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmceed.h petscdmceed.h; fi
if [ ! -L petscdmcomposite.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmcomposite.h petscdmcomposite.h; fi
if [ ! -L petscdmda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmda.h petscdmda.h; fi
if [ ! -L petscdmdatypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmdatypes.h petscdmdatypes.h; fi
if [ ! -L petscdmfield.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmfield.h petscdmfield.h; fi
if [ ! -L petscdmforest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmforest.h petscdmforest.h; fi
if [ ! -L petscdm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdm.h petscdm.h; fi
if [ ! -L petscdmlabelephemeral.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabelephemeral.h petscdmlabelephemeral.h; fi
if [ ! -L petscdmlabel.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabel.h petscdmlabel.h; fi
if [ ! -L petscdmmoab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmmoab.h petscdmmoab.h; fi
if [ ! -L petscdmnetwork.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmnetwork.h petscdmnetwork.h; fi
if [ ! -L petscdmpatch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmpatch.h petscdmpatch.h; fi
if [ ! -L petscdmplexceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexceed.h petscdmplexceed.h; fi
if [ ! -L petscdmplex.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplex.h petscdmplex.h; fi
if [ ! -L petscdmplextransform.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransform.h petscdmplextransform.h; fi
if [ ! -L petscdmplextransformtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransformtypes.h petscdmplextransformtypes.h; fi
if [ ! -L petscdmplextypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextypes.h petscdmplextypes.h; fi
if [ ! -L petscdmproduct.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmproduct.h petscdmproduct.h; fi
if [ ! -L petscdmredundant.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmredundant.h petscdmredundant.h; fi
if [ ! -L petscdmshell.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmshell.h petscdmshell.h; fi
if [ ! -L petscdmsliced.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmsliced.h petscdmsliced.h; fi
if [ ! -L petscdmstag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmstag.h petscdmstag.h; fi
if [ ! -L petscdmswarm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmswarm.h petscdmswarm.h; fi
if [ ! -L petscdmtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmtypes.h petscdmtypes.h; fi
if [ ! -L petscdraw.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdraw.h petscdraw.h; fi
if [ ! -L petscdrawtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdrawtypes.h petscdrawtypes.h; fi
if [ ! -L petscds.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscds.h petscds.h; fi
if [ ! -L petscdstypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdstypes.h petscdstypes.h; fi
if [ ! -L petscdt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdt.h petscdt.h; fi
if [ ! -L petscdualspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdualspace.h petscdualspace.h; fi
if [ ! -L petscerror.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscerror.h petscerror.h; fi
if [ ! -L petscfeceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfeceed.h petscfeceed.h; fi
if [ ! -L petscfe.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfe.h petscfe.h; fi
if [ ! -L petscfetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfetypes.h petscfetypes.h; fi
if [ ! -L petscfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfix.h petscfix.h; fi
if [ ! -L petscfvceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvceed.h petscfvceed.h; fi
if [ ! -L petscfv.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfv.h petscfv.h; fi
if [ ! -L petscfvtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvtypes.h petscfvtypes.h; fi
if [ ! -L petsc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsc.h petsc.h; fi
if [ ! -L petscis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscis.h petscis.h; fi
if [ ! -L petscistypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscistypes.h petscistypes.h; fi
if [ ! -L petscksp.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscksp.h petscksp.h; fi
if [ ! -L petsclandau.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclandau.h petsclandau.h; fi
if [ ! -L petsclayouthdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclayouthdf5.h petsclayouthdf5.h; fi
if [ ! -L petsclogdeprecated.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogdeprecated.h petsclogdeprecated.h; fi
if [ ! -L petsclog.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclog.h petsclog.h; fi
if [ ! -L petsclogtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogtypes.h petsclogtypes.h; fi
if [ ! -L petscmachineinfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmachineinfo.h petscmachineinfo.h; fi
if [ ! -L petscmacros.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmacros.h petscmacros.h; fi
if [ ! -L petscmatcoarsen.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatcoarsen.h petscmatcoarsen.h; fi
if [ ! -L petscmatelemental.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatelemental.h petscmatelemental.h; fi
if [ ! -L petscmat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmat.h petscmat.h; fi
if [ ! -L petscmath.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmath.h petscmath.h; fi
if [ ! -L petscmathtool.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathtool.h petscmathtool.h; fi
if [ ! -L petscmathypre.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathypre.h petscmathypre.h; fi
if [ ! -L petscmatlab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatlab.h petscmatlab.h; fi
if [ ! -L petscoptions.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscoptions.h petscoptions.h; fi
if [ ! -L petscpartitioner.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpartitioner.h petscpartitioner.h; fi
if [ ! -L petscpc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpc.h petscpc.h; fi
if [ ! -L petscpctypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpctypes.h petscpctypes.h; fi
if [ ! -L petscpf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpf.h petscpf.h; fi
if [ ! -L petscpkg_version.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpkg_version.h petscpkg_version.h; fi
if [ ! -L petscsection.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsection.h petscsection.h; fi
if [ ! -L petscsectiontypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsectiontypes.h petscsectiontypes.h; fi
if [ ! -L petscsf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsf.h petscsf.h; fi
if [ ! -L petscsftypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsftypes.h petscsftypes.h; fi
if [ ! -L petscsnes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnes.h petscsnes.h; fi
if [ ! -L petscspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscspace.h petscspace.h; fi
if [ ! -L petscstring.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscstring.h petscstring.h; fi
if [ ! -L petscsys.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsys.h petscsys.h; fi
if [ ! -L petscsystypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsystypes.h petscsystypes.h; fi
if [ ! -L petsctao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao.h petsctao.h; fi
if [ ! -L petsctaolinesearch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctaolinesearch.h petsctaolinesearch.h; fi
if [ ! -L petsctime.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctime.h petsctime.h; fi
if [ ! -L petscts.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscts.h petscts.h; fi
if [ ! -L petscvec.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscvec.h petscvec.h; fi
if [ ! -L petscversion.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscversion.h petscversion.h; fi
if [ ! -L petscviennacl.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviennacl.h petscviennacl.h; fi
if [ ! -L petscviewerexodusii.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerexodusii.h petscviewerexodusii.h; fi
if [ ! -L petscviewer.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewer.h petscviewer.h; fi
if [ ! -L petscviewerhdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerhdf5.h petscviewerhdf5.h; fi
if [ ! -L petscviewersaws.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewersaws.h petscviewersaws.h; fi
if [ ! -L petscviewertypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewertypes.h petscviewertypes.h; fi
if [ ! -L petscwebclient.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscwebclient.h petscwebclient.h; fi
if [ ! -L smumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_c.h smumps_c.h; fi
if [ ! -L smumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_root.h smumps_root.h; fi
if [ ! -L smumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_struc.h smumps_struc.h; fi
if [ ! -L zconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zconf.h zconf.h; fi
if [ ! -L zlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zlib.h zlib.h; fi
if [ ! -L zmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_c.h zmumps_c.h; fi
if [ ! -L zmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_root.h zmumps_root.h; fi
if [ ! -L zmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_struc.h zmumps_struc.h; fi
if [ ! -L BAR2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BAR2.h BAR2.h; fi
if [ ! -L BARRIER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BARRIER.h BARRIER.h; fi
if [ ! -L CPP_EEMACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CPP_EEMACROS.h CPP_EEMACROS.h; fi
if [ ! -L CUMULSUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CUMULSUM.h CUMULSUM.h; fi
if [ ! -L DEF_IN_MAKEFILE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/DEF_IN_MAKEFILE.h DEF_IN_MAKEFILE.h; fi
if [ ! -L EEBUFF_SCPU.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEBUFF_SCPU.h EEBUFF_SCPU.h; fi
if [ ! -L EEPARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEPARAMS.h EEPARAMS.h; fi
if [ ! -L EESUPPORT.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EESUPPORT.h EESUPPORT.h; fi
if [ ! -L EXCH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EXCH.h EXCH.h; fi
if [ ! -L GLOBAL_MAX.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_MAX.h GLOBAL_MAX.h; fi
if [ ! -L GLOBAL_SUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_SUM.h GLOBAL_SUM.h; fi
if [ ! -L MAIN_PDIRECTIVES1.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES1.h MAIN_PDIRECTIVES1.h; fi
if [ ! -L MAIN_PDIRECTIVES2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES2.h MAIN_PDIRECTIVES2.h; fi
if [ ! -L MPI_INFO.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MPI_INFO.h MPI_INFO.h; fi
if [ ! -L SIGREG.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/SIGREG.h SIGREG.h; fi
if [ ! -L CG2D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG2D.h CG2D.h; fi
if [ ! -L CG3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG3D.h CG3D.h; fi
if [ ! -L CPP_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h CPP_OPTIONS.h; fi
if [ ! -L DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXC_MACROS.h DXC_MACROS.h; fi
if [ ! -L DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXF_MACROS.h DXF_MACROS.h; fi
if [ ! -L DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXG_MACROS.h DXG_MACROS.h; fi
if [ ! -L DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXV_MACROS.h DXV_MACROS.h; fi
if [ ! -L DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYC_MACROS.h DYC_MACROS.h; fi
if [ ! -L DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYF_MACROS.h DYF_MACROS.h; fi
if [ ! -L DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYG_MACROS.h DYG_MACROS.h; fi
if [ ! -L DYNVARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYNVARS.h DYNVARS.h; fi
if [ ! -L DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYU_MACROS.h DYU_MACROS.h; fi
if [ ! -L EOS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/EOS.h EOS.h; fi
if [ ! -L FCORI_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FCORI_MACROS.h FCORI_MACROS.h; fi
if [ ! -L FFIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FFIELDS.h FFIELDS.h; fi
if [ ! -L GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID.h GRID.h; fi
if [ ! -L GRID_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID_MACROS.h GRID_MACROS.h; fi
if [ ! -L HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACC_MACROS.h HFACC_MACROS.h; fi
if [ ! -L HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACS_MACROS.h HFACS_MACROS.h; fi
if [ ! -L HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACW_MACROS.h HFACW_MACROS.h; fi
if [ ! -L MASKS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKS_MACROS.h MASKS_MACROS.h; fi
if [ ! -L MASKW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKW_MACROS.h MASKW_MACROS.h; fi
if [ ! -L NH_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/NH_VARS.h NH_VARS.h; fi
if [ ! -L PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/PARAMS.h PARAMS.h; fi
if [ ! -L RA_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RA_MACROS.h RA_MACROS.h; fi
if [ ! -L RAS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAS_MACROS.h RAS_MACROS.h; fi
if [ ! -L RAW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAW_MACROS.h RAW_MACROS.h; fi
if [ ! -L RECIP_DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXC_MACROS.h RECIP_DXC_MACROS.h; fi
if [ ! -L RECIP_DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXF_MACROS.h RECIP_DXF_MACROS.h; fi
if [ ! -L RECIP_DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXG_MACROS.h RECIP_DXG_MACROS.h; fi
if [ ! -L RECIP_DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXV_MACROS.h RECIP_DXV_MACROS.h; fi
if [ ! -L RECIP_DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYC_MACROS.h RECIP_DYC_MACROS.h; fi
if [ ! -L RECIP_DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYF_MACROS.h RECIP_DYF_MACROS.h; fi
if [ ! -L RECIP_DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYG_MACROS.h RECIP_DYG_MACROS.h; fi
if [ ! -L RECIP_DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYU_MACROS.h RECIP_DYU_MACROS.h; fi
if [ ! -L RECIP_HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACC_MACROS.h RECIP_HFACC_MACROS.h; fi
if [ ! -L RECIP_HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACS_MACROS.h RECIP_HFACS_MACROS.h; fi
if [ ! -L RECIP_HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACW_MACROS.h RECIP_HFACW_MACROS.h; fi
if [ ! -L RESTART.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RESTART.h RESTART.h; fi
if [ ! -L SET_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SET_GRID.h SET_GRID.h; fi
if [ ! -L SOLVE_FOR_PRESSURE3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE3D.h SOLVE_FOR_PRESSURE3D.h; fi
if [ ! -L SOLVE_FOR_PRESSURE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE.h SOLVE_FOR_PRESSURE.h; fi
if [ ! -L SURFACE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SURFACE.h SURFACE.h; fi
if [ ! -L TANPHIATU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATU_MACROS.h TANPHIATU_MACROS.h; fi
if [ ! -L TANPHIATV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATV_MACROS.h TANPHIATV_MACROS.h; fi
if [ ! -L THE_MODEL_COMMON_BLOCKS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/THE_MODEL_COMMON_BLOCKS.h THE_MODEL_COMMON_BLOCKS.h; fi
if [ ! -L XC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/XC_MACROS.h XC_MACROS.h; fi
if [ ! -L YC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/YC_MACROS.h YC_MACROS.h; fi
Creating FC_NAMEMANGLE.h ...
echo "#define FC_NAMEMANGLE(X)  X ## _" > FC_NAMEMANGLE.h
Creating BUILD_INFO.h ...
echo "#define THISVER 'checkpoint68i'" > BUILD_INFO.h
echo "#define THISUSER 'jenkins'" >> BUILD_INFO.h
echo "#define THISDATE 'Mon Jul 29 03:46:08 AM PDT 2024'" >> BUILD_INFO.h
echo "#define THISHOST 'Debian-12-VM'" >> BUILD_INFO.h
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build'
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/xmakedepend -f Makefile -o .f -DWORDLENGTH=4 -DNML_TERMINATOR -DALLOW_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_ETIME_SBR -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -DHAVE_FLUSH  -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu -I/usr/include cpl_issm.F do_oceanic_phys.F eeboot_minimal.F eedie.F chksum_tiled.F debug_call.F debug_cs_corner_uv.F debug_enter.F debug_fld_stats_rl.F debug_fld_stats_rs.F debug_leave.F debug_msg.F debug_stats_rl.F debug_stats_rs.F fill_in_corners_rl.F write_fullarray_rl.F write_fullarray_rs.F diag_calc_psivel.F diag_cg2d.F diagnostics_addtolist.F diagnostics_calc_phivel.F diagnostics_check.F diagnostics_clear.F diagnostics_fill.F diagnostics_fill_field.F diagnostics_fill_rs.F diagnostics_fill_state.F diagnostics_fract_fill.F diagnostics_ini_io.F diagnostics_init_early.F diagnostics_init_fixed.F diagnostics_init_varia.F diagnostics_interp_p2p.F diagnostics_interp_vert.F diagnostics_is_on.F diagnostics_list_check.F diagnostics_main_init.F diagnostics_mnc_out.F diagnostics_out.F diagnostics_readparms.F diagnostics_read_pickup.F diagnostics_scale_fill.F diagnostics_scale_fill_rs.F diagnostics_set_calc.F diagnostics_setdiag.F diagnostics_set_levels.F diagnostics_set_pointers.F diagnostics_status_error.F diagnostics_sum_levels.F diagnostics_summary.F diagnostics_switch_onoff.F diagnostics_utils.F diagnostics_write_adj.F diagnostics_write.F diagnostics_write_pickup.F diagstats_ascii_out.F diagstats_calc.F diagstats_clear.F diagstats_close_io.F diagstats_fill.F diagstats_global.F diagstats_ini_io.F diagstats_local.F diagstats_mnc_out.F diagstats_others_calc.F diagstats_output.F diagstats_setdiag.F diagstats_set_pointers.F diagstats_set_regions.F diag_vegtile_fill.F gad_advection.F gad_advscheme.F gad_biharm_r.F gad_biharm_x.F gad_biharm_y.F gad_c2_adv_r.F gad_c2_adv_x.F gad_c2_adv_y.F gad_c2_impl_r.F gad_c4_adv_r.F gad_c4_adv_x.F gad_c4_adv_y.F gad_calc_rhs.F gad_check.F gad_del2.F gad_diagnostics_init.F gad_diagnostics_state.F gad_diff_r.F gad_diff_x.F gad_diff_y.F gad_dst2u1_adv_r.F gad_dst2u1_adv_x.F gad_dst2u1_adv_y.F gad_dst2u1_impl_r.F gad_dst3_adv_r.F gad_dst3_adv_x.F gad_dst3_adv_y.F gad_dst3fl_adv_r.F gad_dst3fl_adv_x.F gad_dst3fl_adv_y.F gad_dst3fl_impl_r.F gad_exch_som.F gad_fluxlimit_adv_r.F gad_fluxlimit_adv_x.F gad_fluxlimit_adv_y.F gad_fluxlimit_impl_r.F gad_grad_x.F gad_grad_y.F gad_implicit_r.F gad_init_fixed.F gad_init_varia.F gad_os7mp_adv_r.F gad_os7mp_adv_x.F gad_os7mp_adv_y.F gad_osc_hat_r.F gad_osc_hat_x.F gad_osc_hat_y.F gad_osc_mul_r.F gad_osc_mul_x.F gad_osc_mul_y.F gad_plm_fun.F gad_ppm_adv_r.F gad_ppm_adv_x.F gad_ppm_adv_y.F gad_ppm_flx_r.F gad_ppm_flx_x.F gad_ppm_flx_y.F gad_ppm_fun.F gad_ppm_hat_r.F gad_ppm_hat_x.F gad_ppm_hat_y.F gad_ppm_p3e_r.F gad_ppm_p3e_x.F gad_ppm_p3e_y.F gad_pqm_adv_r.F gad_pqm_adv_x.F gad_pqm_adv_y.F gad_pqm_flx_r.F gad_pqm_flx_x.F gad_pqm_flx_y.F gad_pqm_fun.F gad_pqm_hat_r.F gad_pqm_hat_x.F gad_pqm_hat_y.F gad_pqm_p5e_r.F gad_pqm_p5e_x.F gad_pqm_p5e_y.F gad_read_pickup.F gad_som_advect.F gad_som_adv_r.F gad_som_adv_x.F gad_som_adv_y.F gad_som_exchanges.F gad_som_fill_cs_corner.F gad_som_lim_r.F gad_som_prep_cs_corner.F gad_u3_adv_r.F gad_u3_adv_x.F gad_u3_adv_y.F gad_u3c4_impl_r.F gad_write_pickup.F salt_fill.F mdsio_buffertorl.F mdsio_buffertors.F mdsio_check4file.F mdsio_facef_read.F mdsio_gl.F mdsio_gl_slice.F mdsio_pass_r4torl.F mdsio_pass_r4tors.F mdsio_pass_r8torl.F mdsio_pass_r8tors.F mdsio_rd_rec_rl.F mdsio_rd_rec_rs.F mdsio_read_field.F mdsio_read_meta.F mdsio_read_section.F mdsio_read_tape.F mdsio_readvec_loc.F mdsio_read_whalos.F mdsio_rw_field.F mdsio_rw_slice.F mdsio_seg4torl.F mdsio_seg4tors.F mdsio_seg8torl.F mdsio_seg8tors.F mdsio_segxtorx_2d.F mdsio_write_field.F mdsio_writelocal.F mdsio_write_meta.F mdsio_write_section.F mdsio_write_tape.F mdsio_writevec_loc.F mdsio_write_whalos.F mdsio_wr_metafiles.F mdsio_wr_rec_rl.F mdsio_wr_rec_rs.F mom_calc_3d_strain.F mom_calc_absvort3.F mom_calc_hdiv.F mom_calc_hfacz.F mom_calc_ke.F mom_calc_relvort3.F mom_calc_smag_3d.F mom_calc_strain.F mom_calc_tension.F mom_calc_visc.F mom_diagnostics_init.F mom_hdissip.F mom_init_fixed.F mom_quasihydrostatic.F mom_u_botdrag_coeff.F mom_u_coriolis_nh.F mom_u_implicit_r.F mom_u_metric_nh.F mom_u_rviscflux.F mom_u_sidedrag.F mom_uv_smag_3d.F mom_v_botdrag_coeff.F mom_v_coriolis_nh.F mom_v_implicit_r.F mom_visc_qgl_limit.F mom_visc_qgl_stretch.F mom_v_metric_nh.F mom_v_rviscflux.F mom_v_sidedrag.F mom_w_coriolis_nh.F mom_w_metric_nh.F mom_w_sidedrag.F mom_w_smag_3d.F mom_calc_rtrans.F mom_fluxform.F mom_u_adv_uu.F mom_u_adv_vu.F mom_u_adv_wu.F mom_u_coriolis.F mom_u_del2u.F mom_u_metric_cylinder.F mom_u_metric_sphere.F mom_uv_boundary.F mom_u_xviscflux.F mom_u_yviscflux.F mom_v_adv_uv.F mom_v_adv_vv.F mom_v_adv_wv.F mom_v_coriolis.F mom_v_del2v.F mom_v_metric_cylinder.F mom_v_metric_sphere.F mom_v_xviscflux.F mom_v_yviscflux.F mom_vecinv.F mom_vi_coriolis.F mom_vi_del2uv.F mom_vi_hdissip.F mom_vi_u_coriolis_c4.F mom_vi_u_coriolis.F mom_vi_u_grad_ke.F mom_vi_u_vertshear.F mom_vi_v_coriolis_c4.F mom_vi_v_coriolis.F mom_vi_v_grad_ke.F mom_vi_v_vertshear.F mon_advcfl.F mon_advcflw2.F mon_advcflw.F mon_calc_advcfl.F mon_calc_stats_rl.F mon_calc_stats_rs.F mon_init.F monitor_ad.F monitor.F monitor_g.F mon_ke.F mon_out.F mon_printstats_rl.F mon_printstats_rs.F mon_set_iounit.F mon_set_pref.F mon_solution.F mon_stats_latbnd_rl.F mon_stats_rl.F mon_stats_rs.F mon_surfcor.F mon_vort3.F mon_writestats_rl.F mon_writestats_rs.F obcs_add_tides.F obcs_adjust.F obcs_adjust_uvice.F obcs_apply_eta.F obcs_apply_ptracer.F obcs_apply_r_star.F obcs_apply_seaice.F obcs_apply_surf_dr.F obcs_apply_ts.F obcs_apply_uv.F obcs_apply_uvice.F obcs_apply_w.F obcs_balance_flow.F obcs_calc.F obcs_calc_stevens.F obcs_check_depths.F obcs_check.F obcs_copy_tracer.F obcs_copy_uv_n.F obcs_diag_balance.F obcs_exchanges.F obcs_exf_load.F obcs_fields_load.F obcs_init_fixed.F obcs_init_variables.F obcs_monitor.F obcs_mon_stats.F obcs_output.F obcs_prescribe_read.F obcs_readparms.F obcs_read_pickup.F obcs_save_uv_n.F obcs_seaice_sponge.F obcs_set_connect.F obcs_sponge.F obcs_u1_adv_tracer.F obcs_write_pickup.F orlanski_east.F orlanski_init.F orlanski_north.F orlanski_south.F orlanski_west.F get_write_global_fld.F read_fld_xy_rl.F read_fld_xy_rs.F read_fld_xyz_rl.F read_fld_xyz_rs.F read_glvec_rl.F read_glvec_rs.F read_mflds.F read_rec.F rw_get_suffix.F set_write_global_fld.F write_fld_3d_rl.F write_fld_3d_rs.F write_fld_s3d_rl.F write_fld_s3d_rs.F write_fld_xy_rl.F write_fld_xy_rs.F write_fld_xyz_rl.F write_fld_xyz_rs.F write_glvec_rl.F write_glvec_rs.F write_local_rl.F write_local_rs.F write_rec.F shelfice_check.F shelfice_cost_accumulate.F shelfice_cost_final.F shelfice_cost_shifwflx.F shelfice_diagnostics_drag.F shelfice_forcing.F shelfice_forcing_surf.F shelfice_init_depths.F shelfice_init_fixed.F shelfice_init_varia.F shelfice_mask_seaice.F shelfice_mnc_init.F shelfice_output.F shelfice_readparms.F shelfice_read_pickup.F shelfice_remesh_calc_w.F shelfice_remesh_c_mask.F shelfice_remeshing.F shelfice_remesh_state.F shelfice_remesh_uv_mask.F shelfice_step_icemass.F shelfice_thermodynamics.F shelfice_u_drag_coeff.F shelfice_v_drag_coeff.F shelfice_write_pickup.F timeave_cumul_1k1t.F timeave_cumul_1t.F timeave_cumul_1vfc.F timeave_cumul_2v.F timeave_cumul_2vfc.F timeave_cumulate.F timeave_cumul_dif_1t.F timeave_init_fixed.F timeave_norma_2v.F timeave_normalize.F timeave_reset.F timeave_statvars.F timeave_statv_write.F timeave_surf_flux.F all_proc_die.F bar2.F bar_check.F barrier.F check_threads.F comm_stats.F cumulsum_z_tile.F different_multiple.F diff_phase_multiple.F eeboot.F eedata_example.F eeintro_msg.F eeset_parms.F eewrite_eeenv.F exch0_r4.F exch0_r8.F exch0_rl.F exch0_rs.F exch1_bg_r4_cube.F exch1_bg_r8_cube.F exch1_bg_rl_cube.F exch1_bg_rs_cube.F exch1_r4_cube.F exch1_r4.F exch1_r8_cube.F exch1_r8.F exch1_rl_ad.F exch1_rl_cube_ad.F exch1_rl_cube.F exch1_rl.F exch1_rs_ad.F exch1_rs_cube_ad.F exch1_rs_cube.F exch1_rs.F exch1_uv_r4_cube.F exch1_uv_r8_cube.F exch1_uv_rl_cube.F exch1_uv_rs_cube.F exch1_z_r4_cube.F exch1_z_r8_cube.F exch1_z_rl_cube.F exch1_z_rs_cube.F exch_3d_r4.F exch_3d_r8.F exch_3d_rl.F exch_3d_rs.F exch_cycle_ebl.F exch_init.F exch_r4_recv_get_x.F exch_r4_recv_get_y.F exch_r4_send_put_x.F exch_r4_send_put_y.F exch_r8_recv_get_x.F exch_r8_recv_get_y.F exch_r8_send_put_x.F exch_r8_send_put_y.F exch_rl_recv_get_x.F exch_rl_recv_get_y.F exch_rl_send_put_x.F exch_rl_send_put_y.F exch_rs_recv_get_x.F exch_rs_recv_get_y.F exch_rs_send_put_x.F exch_rs_send_put_y.F exch_s3d_r4.F exch_s3d_r8.F exch_s3d_rl.F exch_s3d_rs.F exch_sm_3d_r4.F exch_sm_3d_r8.F exch_sm_3d_rl.F exch_sm_3d_rs.F exch_uv_3d_r4.F exch_uv_3d_r8.F exch_uv_3d_rl.F exch_uv_3d_rs.F exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rs.F exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rs.F exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rs.F exch_uv_xy_r4.F exch_uv_xy_r8.F exch_uv_xy_rl.F exch_uv_xy_rs.F exch_uv_xyz_r4.F exch_uv_xyz_r8.F exch_uv_xyz_rl.F exch_uv_xyz_rs.F exch_xy_r4.F exch_xy_r8.F exch_xy_rl.F exch_xy_rs.F exch_xyz_r4.F exch_xyz_r8.F exch_xyz_rl.F exch_xyz_rs.F exch_z_3d_r4.F exch_z_3d_r8.F exch_z_3d_rl.F exch_z_3d_rs.F fill_cs_corner_ag_rl.F fill_cs_corner_tr_rl.F fill_cs_corner_uv_rl.F fill_cs_corner_uv_rs.F fool_the_compiler.F gather_2d_r4.F gather_2d_r8.F gather_2d_wh_r4.F gather_2d_wh_r8.F gather_vec_r4.F gather_vec_r8.F gather_xz.F gather_yz.F get_periodic_interval.F global_max.F global_sum.F global_sum_singlecpu.F global_sum_tile.F global_vec_sum.F gsum.F ini_communication_patterns.F ini_procs.F ini_threading_environment.F lef_zero.F main.F master_cpu_io.F master_cpu_thread.F mds_byteswapi4.F mds_byteswapr4.F mds_byteswapr8.F mdsfindunit.F mds_flush.F mds_reclen.F memsync.F nml_change_syntax.F nml_set_terminator.F open_copy_data_file.F print.F reset_halo.F scatter_2d_r4.F scatter_2d_r8.F scatter_2d_wh_r4.F scatter_2d_wh_r8.F scatter_vec_r4.F scatter_vec_r8.F scatter_xz.F scatter_yz.F stop_if_error.F timers.F utils.F write_utils.F adams_bashforth2.F adams_bashforth3.F add_walls2masks.F apply_forcing.F calc_3d_diffusivity.F calc_adv_flow.F calc_div_ghat.F calc_eddy_stress.F calc_grad_phi_fv.F calc_grad_phi_hyd.F calc_grad_phi_surf.F calc_grid_angles.F calc_gw.F calc_ivdc.F calc_oce_mxlayer.F calc_phi_hyd.F calc_r_star.F calc_surf_dr.F calc_viscosity.F calc_wsurf_tr.F cg2d_ex0.F cg2d.F cg2d_nsa.F cg2d_sr.F cg3d_ex0.F cg3d.F check_pickup.F config_check.F config_summary.F convective_adjustment.F convective_adjustment_ini.F convectively_mixtracer.F convective_weights.F correction_step.F cycle_ab_tracer.F cycle_tracer.F diags_oceanic_surf_flux.F diags_phi_hyd.F diags_phi_rlow.F diags_rho.F diags_sound_speed.F do_atmospheric_phys.F do_fields_blocking_exchanges.F do_stagger_fields_exchanges.F do_statevars_diags.F do_statevars_tave.F do_the_model_io.F do_write_pickup.F dynamics.F external_fields_load.F external_forcing.F external_forcing_surf.F find_alpha.F find_hyd_press_1d.F find_rho.F forcing_surf_relax.F forward_step.F freesurf_rescale_g.F freeze_surface.F grad_sigma.F gsw_teos10.F impldiff.F ini_cartesian_grid.F ini_cg2d.F ini_cg3d.F ini_cori.F ini_curvilinear_grid.F ini_cylinder_grid.F ini_depths.F ini_dynvars.F ini_eos.F ini_ffields.F ini_fields.F ini_forcing.F ini_global_domain.F ini_grid.F ini_linear_phisurf.F ini_local_grid.F ini_masks_etc.F ini_mixing.F ini_mnc_vars.F ini_model_io.F ini_nh_fields.F ini_nh_vars.F ini_nlfs_vars.F ini_parms.F ini_p_ground.F ini_pressure.F ini_psurf.F ini_salt.F ini_sigma_hfac.F ini_spherical_polar_grid.F ini_theta.F initialise_fixed.F initialise_varia.F ini_vel.F ini_vertical_grid.F integrate_for_w.F integr_continuity.F load_fields_driver.F load_grid_spacing.F load_ref_files.F main_do_loop.F momentum_correction_step.F packages_boot.F packages_check.F packages_error_msg.F packages_init_fixed.F packages_init_variables.F packages_print_msg.F packages_readparms.F packages_unused_msg.F packages_write_pickup.F plot_field.F port_rand.F post_cg3d.F pre_cg3d.F pressure_for_eos.F read_pickup.F remove_mean.F reset_nlfs_vars.F rotate_spherical_polar_grid.F rotate_uv2en.F salt_integrate.F seawater.F set_defaults.F set_grid_factors.F set_parms.F set_ref_state.F solve_for_pressure.F solve_pentadiagonal.F solve_tridiagonal.F solve_uv_tridiago.F state_summary.F swfrac.F taueddy_init_varia.F taueddy_tendency_apply.F temp_integrate.F the_main_loop.F the_model_main.F thermodynamics.F timestep.F timestep_tracer.F timestep_wvel.F tracers_correction_step.F tracers_iigw_correction.F turnoff_model_io.F update_cg2d.F update_etah.F update_etaws.F update_masks_etc.F update_r_star.F update_sigma.F update_surf_dr.F write_grid.F write_pickup.F write_state.F
Appending dependencies to Makefile
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/f90mkdepend >> Makefile
WARNING: f90mkdepend: no source file found for module `petscdtbinomial()`
WARNING: f90mkdepend: no source file found for module `seterra()`
WARNING: f90mkdepend: no source file found for module `seterra()`
WARNING: f90mkdepend: no source file found for module `petsccalla()`.
WARNING: f90mkdepend: no source file found for module `chkmema`
WARNING: f90mkdepend: no source file found for module `petscstackpushexternal()`
WARNING: f90mkdepend: no source file found for module `petscfunctionbeginuser`
WARNING: f90mkdepend: no source file found for module this
WARNING: f90mkdepend: no source file found for module `petscobjectoptionsbegin()`
WARNING: f90mkdepend: no source file found for module `petsc_null_integer`
WARNING: f90mkdepend: no source file found for module `petscint64mult()`
WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()`
WARNING: f90mkdepend: no source file found for module `petscintmulterror()`
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WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()`
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WARNING: f90mkdepend: no source file found for module `petscintmulterror()`
WARNING: f90mkdepend: no source file found for module `petscint64mult()`
WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()`
WARNING: f90mkdepend: no source file found for module `petscint64mult()`
WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()`
WARNING: f90mkdepend: no source file found for module the
WARNING: f90mkdepend: no source file found for module `petscclassidregister()`
WARNING: f90mkdepend: no source file found for module `petsccount_fmt`
WARNING: f90mkdepend: no source file found for module of
WARNING: f90mkdepend: no source file found for module `petscviewerfilesetmode()`
rm -f makedepend.out

[41;37m   step #6: RunUncoupledMITgcm   [0m

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[41;37m   step #7: CreateMesh   [0m

Info: creating coordinates in polar stereographic (Std Latitude: 71S Meridian: 0)
saving model as: Models/IceOcean.CreateMesh

[41;37m   step #8: MeshGeometry   [0m

saving model as: Models/IceOcean.MeshGeometry

[41;37m   step #9: ParameterizeIce   [0m

saving model as: Models/IceOcean.ParameterizeIce

[41;37m   step #10: RunUncoupledISSM   [0m

checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/12  time [yr]: 0.08 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 2/12  time [yr]: 0.17 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 3/12  time [yr]: 0.25 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 4/12  time [yr]: 0.33 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 5/12  time [yr]: 0.42 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 6/12  time [yr]: 0.50 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 7/12  time [yr]: 0.58 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 8/12  time [yr]: 0.67 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 9/12  time [yr]: 0.75 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 10/12  time [yr]: 0.83 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 11/12  time [yr]: 0.92 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
iteration 12/12  time [yr]: 1.00 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0989614
   Total Core solution elapsed time:       2.80255
   Linear solver elapsed time:             1.81656 (65%)

   Total elapsed time: 0 hrs 0 min 2 sec
loading results from cluster
saving model as: Models/IceOcean.RunUncoupledISSM

[41;37m   step #11: RunCoupledMITgcmISSM   [0m

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checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.08 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0365001
   Total Core solution elapsed time:       0.533997
   Linear solver elapsed time:             0.355232 (67%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.083333
STOP NORMAL END
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checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.17 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0312853
   Total Core solution elapsed time:       0.279411
   Linear solver elapsed time:             0.17689 (63%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.16667
STOP NORMAL END
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STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.25 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0292121
   Total Core solution elapsed time:       0.240668
   Linear solver elapsed time:             0.152593 (63%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.25
STOP NORMAL END
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checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.33 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0426504
   Total Core solution elapsed time:       0.242837
   Linear solver elapsed time:             0.154103 (63%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.33333
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.42 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0466164
   Total Core solution elapsed time:       0.269917
   Linear solver elapsed time:             0.157945 (59%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.41667
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.50 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0367091
   Total Core solution elapsed time:       0.227958
   Linear solver elapsed time:             0.14647 (64%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.5
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.58 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0399813
   Total Core solution elapsed time:       0.221808
   Linear solver elapsed time:             0.144386 (65%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.58333
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/2  time [yr]: 0.67 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0306688
   Total Core solution elapsed time:       0.210346
   Linear solver elapsed time:             0.13549 (64%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.66667
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.75 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0431139
   Total Core solution elapsed time:       0.203914
   Linear solver elapsed time:             0.126253 (62%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.75
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 0.83 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0295723
   Total Core solution elapsed time:       0.22669
   Linear solver elapsed time:             0.144615 (64%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.83333
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/2  time [yr]: 0.92 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0548095
   Total Core solution elapsed time:       0.265064
   Linear solver elapsed time:             0.156042 (59%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 0.91667
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 1.00 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0435724
   Total Core solution elapsed time:       0.27974
   Linear solver elapsed time:             0.183384 (66%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
Year: 1
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
STOP NORMAL END
checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster

Ice-sheet and Sea-level System Model (ISSM) version  4.24
(website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)

call computational core:
iteration 1/1  time [yr]: 1.08 (time step: 0.08)
   computing smb 
   computing new velocity
   computing basal mass balance
   computing mass transport
   call computational core
   computing new grounding line position
   updating vertices positions
   saving temporary results
write lock file:

   FemModel initialization elapsed time:   0.0329071
   Total Core solution elapsed time:       0.219134
   Linear solver elapsed time:             0.139345 (64%)

   Total elapsed time: 0 hrs 0 min 0 sec
loading results from cluster
saving model as: Models/IceOcean.RunCoupledMITgcmISSM
SUCCESS difference: 0       <   2e-13 test id: 4001 test name: IceOcean field: Base1
SUCCESS difference: 0       <   1e-13 test id: 4001 test name: IceOcean field: Melting1
SUCCESS difference: 8e-15   <   8e-06 test id: 4001 test name: IceOcean field: Vx2
SUCCESS difference: 1.2e-14 <   7e-06 test id: 4001 test name: IceOcean field: Vy2
SUCCESS difference: 1.1e-15 <   2e-07 test id: 4001 test name: IceOcean field: Thickness2
SUCCESS difference: 2.5e-16 <   2e-08 test id: 4001 test name: IceOcean field: Base2
SUCCESS difference: 3.4e-16 <   3e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset2
SUCCESS difference: 0       <   1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate2
SUCCESS difference: 0       <   1e-13 test id: 4001 test name: IceOcean field: Melting2
SUCCESS difference: 1.4e-14 <   8e-06 test id: 4001 test name: IceOcean field: Vx3
SUCCESS difference: 1.1e-14 <   7e-06 test id: 4001 test name: IceOcean field: Vy3
SUCCESS difference: 1.7e-15 <   4e-07 test id: 4001 test name: IceOcean field: Thickness3
SUCCESS difference: 4.3e-16 <   3e-08 test id: 4001 test name: IceOcean field: Base3
SUCCESS difference: 3.4e-16 <   5e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset3
SUCCESS difference: 0       <   1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate3
SUCCESS difference: 0       <   6e-08 test id: 4001 test name: IceOcean field: Melting3
SUCCESS difference: 1.4e-14 <   8e-06 test id: 4001 test name: IceOcean field: Vx4
SUCCESS difference: 7e-15   <   7e-06 test id: 4001 test name: IceOcean field: Vy4
SUCCESS difference: 2.2e-15 <   5e-07 test id: 4001 test name: IceOcean field: Thickness4
SUCCESS difference: 4.6e-16 <   4e-08 test id: 4001 test name: IceOcean field: Base4
SUCCESS difference: 3.4e-16 <   8e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset4
SUCCESS difference: 0       <   6e-08 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate4
SUCCESS difference: 0       <   3e-07 test id: 4001 test name: IceOcean field: Melting4
+++ exit code: 0
+++ error: 0
Recording test results
Finished: SUCCESS