Started by GitHub push by MathieuMorlighem Running as SYSTEM Building remotely on ha:////4FRe+6xy20tWcmWJshvMkZtzwctW7/kK0yFrPgJregknAAAAox+LCAAAAAAAAP9b85aBtbiIQTGjNKU4P08vOT+vOD8nVc83PyU1x6OyILUoJzMv2y+/JJUBAhiZGBgqihhk0NSjKDWzXb3RdlLBUSYGJk8GtpzUvPSSDB8G5tKinBIGIZ+sxLJE/ZzEvHT94JKizLx0a6BxUmjGOUNodHsLgAyeEgZx/eT83ILSktQifZfUpMzEvHhDI90wX30A9eLPMswAAAA=Debian_12-VM (debian linux) in workspace /home/jenkins/workspace/Debian_Linux-Ice-Ocean The recommended git tool is: NONE > git rev-parse --resolve-git-dir /home/jenkins/workspace/Debian_Linux-Ice-Ocean/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10 Fetching upstream changes from git@github.com:ISSMteam/ISSM.git > git --version # timeout=10 > git --version # 'git version 2.39.5' using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins Verifying host key using known hosts file > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/main^{commit} # timeout=10 Checking out Revision fbce9d518e939b6cb9f70954c113d6023304163f (refs/remotes/origin/main) > git config core.sparsecheckout # timeout=10 > git checkout -f fbce9d518e939b6cb9f70954c113d6023304163f # timeout=10 Commit message: "CHG: use Dakota's output manager to figure out where to read and write files" > git rev-list --no-walk f7816f0020a4499ff6896f85e396022f6652b164 # timeout=10 [Debian_Linux-Ice-Ocean] $ /bin/bash /tmp/jenkins2638928415837005086.sh Cleaning up execution directory ====================================================== Determining installation type ====================================================== List of changed files --------------------- src/c/main/issm_dakota.cpp src/m/qmu/preqmu.m src/m/qmu/preqmu.py src/m/solve/solve.m src/m/solve/solve.py -- checking for changed externalpackages... no -- checking for reconfiguration... no -- checking for recompilation... yes ====================================================== Skipping autotools ====================================================== ====================================================== Skipping cmake ====================================================== ====================================================== Skipping petsc ====================================================== ====================================================== Skipping triangle ====================================================== ====================================================== Skipping semic ====================================================== ====================================================== Skipping shell2junit ====================================================== ====================================================== Compiling ISSM ====================================================== Making with 8 CPUs make all-recursive make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' Making all in src make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' Making all in c make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' CXXLD issm.exe CXXLD issm_slc.exe CXXLD issm_ocean.exe CXXLD kriging.exe make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' Making all in m make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' Making all in wrappers make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' Making all in matlab make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' Making install in src make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' Making install in c make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' CXXLD issm.exe CXXLD issm_slc.exe CXXLD issm_ocean.exe CXXLD kriging.exe make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' CXXLD issm.exe CXXLD issm_slc.exe CXXLD issm_ocean.exe CXXLD kriging.exe /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libISSMCore.la libISSMOverload.la libISSMModules.la '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib' libtool: install: /usr/bin/install -c .libs/libISSMCore.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so libtool: install: /usr/bin/install -c .libs/libISSMCore.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.la libtool: install: /usr/bin/install -c .libs/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so libtool: install: /usr/bin/install -c .libs/libISSMOverload.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.la libtool: warning: relinking 'libISSMModules.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -g -O2 -g -O2 -avoid-version -o libISSMModules.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ./shared/Threads/libISSMModules_la-LaunchThread.lo ./shared/Threads/libISSMModules_la-PartitionRange.lo ./shared/Exp/libISSMModules_la-exp.lo ./shared/Triangle/libISSMModules_la-AssociateSegmentToElement.lo ./shared/Triangle/libISSMModules_la-GridInsideHole.lo ./shared/Triangle/libISSMModules_la-OrderSegments.lo ./shared/Triangle/libISSMModules_la-SplitMeshForRifts.lo ./shared/Triangle/libISSMModules_la-TriangleUtils.lo ./modules/Trianglex/libISSMModules_la-Trianglex.lo ./modules/ProcessRiftsx/libISSMModules_la-ProcessRiftsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo ./modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo ./modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo ./modules/InterpFromMeshToGridx/libISSMModules_la-InterpFromMeshToGridx.lo ./modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo ./modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo ./modules/NodeConnectivityx/libISSMModules_la-NodeConnectivityx.lo ./modules/ElementConnectivityx/libISSMModules_la-ElementConnectivityx.lo ./modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo ./modules/Krigingx/libISSMModules_la-Krigingx.lo ./modules/Krigingx/libISSMModules_la-pKrigingx.lo ./libISSMCore.la -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/triangle/install/lib -ltriangle -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lflapack -lfblas ) libtool: install: /usr/bin/install -c .libs/libISSMModules.soT /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so libtool: install: /usr/bin/install -c .libs/libISSMModules.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.la libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/scripts:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ---------------------------------------------------------------------- Libraries have been installed in: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c issm.exe issm_slc.exe issm_ocean.exe kriging.exe '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin' libtool: install: /usr/bin/install -c .libs/issm.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm.exe libtool: install: /usr/bin/install -c .libs/issm_slc.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm_slc.exe libtool: install: /usr/bin/install -c .libs/issm_ocean.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm_ocean.exe libtool: install: /usr/bin/install -c .libs/kriging.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/kriging.exe make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' Making install in m make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' Making install in wrappers make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' Making install in matlab make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib' /bin/bash ../../../libtool --mode=install /usr/bin/install -c libISSMMatlab.la libISSMApi_matlab.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGrid_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Triangle_matlab.la Kriging_matlab.la '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib' libtool: warning: relinking 'libISSMMatlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -avoid-version -o libISSMMatlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ./io/libISSMMatlab_la-CheckNumMatlabArguments.lo ./io/libISSMMatlab_la-FetchMatlabData.lo ./io/libISSMMatlab_la-WriteMatlabData.lo ./../../c/libISSMCore.la ./../../c/libISSMModules.la -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lpetsc -ldl -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -ldmumps -lcmumps -lmumps_common -lpord -lzmumps -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lscalapack -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lflapack -lfblas -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lparmetis -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lmetis -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/libISSMMatlab.soT /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so libtool: install: /usr/bin/install -c .libs/libISSMMatlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.la libtool: install: /usr/bin/install -c .libs/libISSMApi_matlab.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi_matlab.so libtool: install: /usr/bin/install -c .libs/libISSMApi_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi_matlab.la libtool: warning: relinking 'BamgConvertMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgConvertMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgConvertMesh/BamgConvertMesh_matlab_la-BamgConvertMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.la libtool: warning: relinking 'BamgMesher_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgMesher_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgMesher/BamgMesher_matlab_la-BamgMesher.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.la libtool: warning: relinking 'BamgTriangulate_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgTriangulate_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgTriangulate/BamgTriangulate_matlab_la-BamgTriangulate.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.la libtool: warning: relinking 'ContourToMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ContourToMesh/ContourToMesh_matlab_la-ContourToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.la libtool: warning: relinking 'ContourToNodes_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToNodes_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ContourToNodes/ContourToNodes_matlab_la-ContourToNodes.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.la libtool: warning: relinking 'DistanceToMaskBoundary_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o DistanceToMaskBoundary_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../DistanceToMaskBoundary/DistanceToMaskBoundary_matlab_la-DistanceToMaskBoundary.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.la libtool: warning: relinking 'ElementConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ElementConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ElementConnectivity/ElementConnectivity_matlab_la-ElementConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.la libtool: warning: relinking 'ExpSimplify_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpSimplify_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ExpSimplify/ExpSimplify_matlab_la-ExpSimplify.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.la libtool: warning: relinking 'ExpToLevelSet_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpToLevelSet_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ExpToLevelSet/ExpToLevelSet_matlab_la-ExpToLevelSet.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.la libtool: install: /usr/bin/install -c .libs/InterpFromGrid_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGrid_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromGrid_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGrid_matlab.la libtool: warning: relinking 'InterpFromGridToMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromGridToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromGridToMesh/InterpFromGridToMesh_matlab_la-InterpFromGridToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.la libtool: warning: relinking 'InterpFromMesh2d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMesh2d/InterpFromMesh2d_matlab_la-InterpFromMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.la libtool: warning: relinking 'InterpFromMeshToGrid_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToGrid_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToGrid/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.la libtool: warning: relinking 'InterpFromMeshToMesh2d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.la libtool: warning: relinking 'InterpFromMeshToMesh3d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh3d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.la libtool: warning: relinking 'IssmConfig_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o IssmConfig_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../IssmConfig/IssmConfig_matlab_la-IssmConfig.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.la libtool: warning: relinking 'MeshPartition_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshPartition_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../MeshPartition/MeshPartition_matlab_la-MeshPartition.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.la libtool: warning: relinking 'MeshProfileIntersection_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshProfileIntersection_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../MeshProfileIntersection/MeshProfileIntersection_matlab_la-MeshProfileIntersection.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.la libtool: warning: relinking 'NodeConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o NodeConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../NodeConnectivity/NodeConnectivity_matlab_la-NodeConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.la libtool: warning: relinking 'PointCloudFindNeighbors_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PointCloudFindNeighbors_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../PointCloudFindNeighbors/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.la libtool: warning: relinking 'ProcessRifts_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ProcessRifts_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ProcessRifts/ProcessRifts_matlab_la-ProcessRifts.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.la libtool: warning: relinking 'PropagateFlagsFromConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PropagateFlagsFromConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.la libtool: warning: relinking 'Triangle_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Triangle_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Triangle/Triangle_matlab_la-Triangle.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/triangle/install/lib -ltriangle ) libtool: install: /usr/bin/install -c .libs/Triangle_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/Triangle_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.la libtool: warning: relinking 'Kriging_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Kriging_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Kriging/Kriging_matlab_la-Kriging.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/Kriging_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/Kriging_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.la libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/scripts:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ---------------------------------------------------------------------- Libraries have been installed in: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'