Started by user Justin Quinn Running as SYSTEM Building remotely on macOS-Intel (mac) in workspace /Users/jenkins/workspace/macOS-Intel-Examples The recommended git tool is: NONE > git rev-parse --resolve-git-dir /Users/jenkins/workspace/macOS-Intel-Examples/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10 Fetching upstream changes from git@github.com:ISSMteam/ISSM.git > git --version # timeout=10 > git --version # 'git version 2.37.1 (Apple Git-137.1)' using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins Verifying host key using known hosts file > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/main^{commit} # timeout=10 Checking out Revision d94d008767b05a88a66fa61a7f8106f6cb0e4545 (refs/remotes/origin/main) > git config core.sparsecheckout # timeout=10 > git checkout -f d94d008767b05a88a66fa61a7f8106f6cb0e4545 # timeout=10 Commit message: "CHG: fix typos." > git rev-list --no-walk d94d008767b05a88a66fa61a7f8106f6cb0e4545 # timeout=10 [macOS-Intel-Examples] $ /bin/bash /var/folders/j6/3xhtbkbs3kj24wm4s4s4b99w0000gp/T/jenkins11463984726083257765.sh Cleaning up execution directory ====================================================== Determining installation type ====================================================== -- checking for changed externalpackages... no -- checking for reconfiguration... no -- checking for recompilation... no ====================================================== Skipping autotools ====================================================== ====================================================== Skipping cmake ====================================================== ====================================================== Skipping petsc ====================================================== ====================================================== Skipping boost ====================================================== ====================================================== Skipping dakota ====================================================== ====================================================== Skipping chaco ====================================================== ====================================================== Skipping curl ====================================================== ====================================================== Skipping hdf5 ====================================================== ====================================================== Skipping netcdf ====================================================== ====================================================== Skipping proj ====================================================== ====================================================== Skipping gdal ====================================================== ====================================================== Skipping gshhg ====================================================== ====================================================== Skipping gmt ====================================================== ====================================================== Skipping gmsh ====================================================== ====================================================== Skipping triangle ====================================================== ====================================================== Skipping shell2junit ====================================================== Skipping ISSM compilation Downloading examples datasets... unzip: cannot find or open /Users/jenkins/workspace/macOS-Intel-Examples/scripts/../examples/Data/*.zip, /Users/jenkins/workspace/macOS-Intel-Examples/scripts/../examples/Data/*.zip.zip or /Users/jenkins/workspace/macOS-Intel-Examples/scripts/../examples/Data/*.zip.ZIP. No zipfiles found. Testing example: AMR < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Coarse mesh Construction of a mesh from a given geometry Step 2: Parameterization boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero no thermal boundary conditions created: no observed temperature found Step 3: Solve! checking model consistency marshalling file /Users/jenkins/workspace/macOS-Intel-Examples//execution/mismip-08-31-2026-10-58-15-59204/mismip.bin launching solution sequence ─────────────────────────────────────────────────────────────────── Ice-sheet and Sea-level System Model (ISSM) version 2026.3 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ ─────────────────────────────────────────────────────────────────── call computational core: iteration 1/500 time [yr]: 1.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions saving temporary results refining mesh call adjust base and thickness module iteration 2/500 time [yr]: 2.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 3/500 time [yr]: 3.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 4/500 time [yr]: 4.00 (time step: 1.00) computing smb computing new velocity computing basal 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cluster [Warning: Directory already exists.] [> In AMRexportVTK (line 17) In runme (line 68)] SUCCESS Directory contains datasets only; no example to run. Testing example: EsaGRACE < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Global mesh creation Info : Running 'gmsh -2 sphere.geo' [Gmsh 4.12.2-git-eff4d1b8, 1 node, max. 1 thread] Info : Started on Mon Aug 31 11:00:36 2026 Info : Reading 'sphere.geo'... Info : Done reading 'sphere.geo' Info : Meshing 1D... Info : [ 0%] Meshing curve 1 (Circle) Info : [ 10%] Meshing curve 2 (Circle) Info : [ 20%] Meshing curve 3 (Circle) Info : [ 30%] Meshing curve 4 (Circle) Info : [ 40%] Meshing curve 5 (Circle) Info : [ 50%] Meshing curve 6 (Circle) Info : [ 50%] Meshing curve 7 (Circle) Info : [ 60%] Meshing curve 8 (Circle) Info : [ 70%] Meshing curve 9 (Circle) Info : [ 80%] Meshing curve 10 (Circle) Info : [ 90%] Meshing curve 11 (Circle) Info : [100%] Meshing curve 12 (Circle) Info : Done meshing 1D (Wall 0.00202478s, CPU 0.001701s) Info : Meshing 2D... Info : [ 0%] Meshing surface 14 (Surface, MeshAdapt) Info : [ 20%] Meshing surface 16 (Surface, MeshAdapt) Info : [ 30%] Meshing surface 18 (Surface, MeshAdapt) Info : [ 40%] Meshing surface 20 (Surface, MeshAdapt) Info : [ 50%] Meshing surface 22 (Surface, MeshAdapt) Info : [ 70%] Meshing surface 24 (Surface, MeshAdapt) Info : [ 80%] Meshing surface 26 (Surface, MeshAdapt) Info : [ 90%] Meshing surface 28 (Surface, MeshAdapt) Info : Done meshing 2D (Wall 20.1078s, CPU 20.0755s) Info : 7669 nodes 15747 elements Info : Writing 'sphere.msh'... Info : Done writing 'sphere.msh' Info : Stopped on Mon Aug 31 11:00:56 2026 (From start: Wall 20.1525s, CPU 20.1264s) gmtmask: num vertices 7668 gmtmask: done 2026-08-31 11:01:00.964 MATLAB[59316:303804053] CoreText note: Client requested name ".SFNS-Regular", it will get Times-Roman rather than the intended font. All system UI font access should be through proper APIs such as CTFontCreateUIFontForLanguage() or +[NSFont systemFontOfSize:]. 2026-08-31 11:01:00.964 MATLAB[59316:303804053] CoreText note: Set a breakpoint on CTFontLogSystemFontNameRequest to debug. 2026-08-31 11:01:00.969 MATLAB[59316:303804053] CoreText note: Client requested name ".SFNS-Bold", it will get Times-Roman rather than the intended font. All system UI font access should be through proper APIs such as CTFontCreateUIFontForLanguage() or +[NSFont systemFontOfSize:]. 2026-08-31 11:01:00.978 MATLAB[59316:303804053] CoreText note: Client requested name ".SFNS-Regular", it will get Times-Roman rather than the intended font. All system UI font access should be through proper APIs such as CTFontCreateUIFontForLanguage() or +[NSFont systemFontOfSize:]. 2026-08-31 11:01:00.978 MATLAB[59316:303804053] CoreText note: Client requested name ".SFNS-Bold", it will get Times-Roman rather than the intended font. All system UI font access should be through proper APIs such as CTFontCreateUIFontForLanguage() or +[NSFont systemFontOfSize:]. Step 2: Define loads in meters of ice height equivalent If dataset file exists at another location, modify the path in examples/Functions/grace.m Error using internal.matlab.imagesci.nc/openToRead Could not open ../Data/GRCTellus.JPL.200204_201701.LND.RL05_1.DSTvSCS1411.nc for reading. Error in internal.matlab.imagesci.nc (line 124) this.openToRead(); Error in ncread (line 71) ncObj = internal.matlab.imagesci.nc(ncFile); Error in grace (line 50) time_0=ncread(filename,'time'); % days since 2002-01-01 00:00:00 UTC Error in runme (line 33) water_load = grace(md.mesh.elements,md.mesh.lat,md.mesh.long,time_range(1),time_range(2),onvertex);FAILURE Testing example: EsaWahr < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Mesh creation 2026-08-31 11:01:12.713 MATLAB[59407:303804391] CoreText note: Client requested name ".SFNS-Regular", it will get Times-Roman rather than the intended font. All system UI font access should be through proper APIs such as CTFontCreateUIFontForLanguage() or +[NSFont systemFontOfSize:]. 2026-08-31 11:01:12.713 MATLAB[59407:303804391] CoreText note: Set a breakpoint on CTFontLogSystemFontNameRequest to debug. 2026-08-31 11:01:12.718 MATLAB[59407:303804391] CoreText note: Client requested name ".SFNS-Bold", it will get Times-Roman rather than the intended font. All system UI font access should be through proper APIs such as CTFontCreateUIFontForLanguage() or +[NSFont systemFontOfSize:]. 2026-08-31 11:01:12.727 MATLAB[59407:303804391] CoreText note: Client requested name ".SFNS-Regular", it will get Times-Roman rather than the intended font. All system UI font access should be through proper APIs such as CTFontCreateUIFontForLanguage() or +[NSFont systemFontOfSize:]. 2026-08-31 11:01:12.727 MATLAB[59407:303804391] CoreText note: Client requested name ".SFNS-Bold", it will get Times-Roman rather than the intended font. All system UI font access should be through proper APIs such as CTFontCreateUIFontForLanguage() or +[NSFont systemFontOfSize:]. Step 2: Anisotropic mesh creation Anisotropic mesh adaptation WARNING: mesh present but no geometry found. Reconstructing... new number of triangles = 4207 Step 3: Define loads Step 4: Parameterization [Warning: paterson is outdated, please consider using cuffey instead] [> In paterson (line 10) In runme (line 73)] Step 5: Solve Esa solver checking model consistency marshalling file /Users/jenkins/workspace/macOS-Intel-Examples//execution/EsaWahr-08-31-2026-11-01-16-59407/EsaWahr.bin launching solution sequence ─────────────────────────────────────────────────────────────────── Ice-sheet and Sea-level System Model (ISSM) version 2026.3 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ ─────────────────────────────────────────────────────────────────── starting model processor creating datasets for analysis EsaAnalysis updating elements and materials for control parameters updating elements and materials for uncertainty quantification creating output definitions done with model processor Processing finite element model of analysis EsaAnalysis: toolkits Options set for analysis: EsaAnalysis configuring element and loads Configuring elements... Configuring loads... Configuring materials... Configuring inputs... detecting active vertices resolving node constraints creating nodal degrees of freedom Renumbering degrees of freedom call computational core: computing elastic adjustment toolkits Options set for analysis: EsaAnalysis computing elastic geodetic core write lock file: FemModel initialization elapsed time: 0.134002 Total Core solution elapsed time: 0.613729 Linear solver elapsed time: 0 (0%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Step 6: Plot solutions Step 7: Compare results against Wahr semi-analytic solutions SUCCESS Directory contains functions only; no example to run. Testing example: Greenland < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Mesh creation Error using internal.matlab.imagesci.nc/openToRead Could not open ../Data/Greenland_5km_dev1.2.nc for reading. Error in internal.matlab.imagesci.nc (line 124) this.openToRead(); Error in ncread (line 71) ncObj = internal.matlab.imagesci.nc(ncFile); Error in runme (line 17) x1 = ncread(ncdata,'x1');FAILURE Not implemented yet! +++ Removing old junit reports from: /Users/jenkins/workspace/macOS-Intel-Examples/nightlylog/results +++ Running case: Example-AMR +++ working dir: /Users/jenkins/workspace/macOS-Intel-Examples/nightlylog < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Coarse mesh Construction of a mesh from a given geometry Step 2: Parameterization boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero no thermal boundary conditions created: no observed temperature found Step 3: Solve! checking model consistency marshalling file /Users/jenkins/workspace/macOS-Intel-Examples//execution/mismip-08-31-2026-10-58-15-59204/mismip.bin launching solution sequence ─────────────────────────────────────────────────────────────────── Ice-sheet and Sea-level System Model (ISSM) version 2026.3 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ ─────────────────────────────────────────────────────────────────── call computational core: iteration 1/500 time [yr]: 1.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions saving temporary results refining mesh call adjust base and thickness module iteration 2/500 time [yr]: 2.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 3/500 time [yr]: 3.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 4/500 time [yr]: 4.00 (time step: 1.00) computing smb computing new velocity computing basal 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position updating vertices positions refining mesh call adjust base and thickness module iteration 20/500 time [yr]: 20.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions saving temporary results refining mesh call adjust base and thickness module iteration 21/500 time [yr]: 21.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 22/500 time [yr]: 22.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 23/500 time [yr]: 23.00 (time step: 1.00) computing smb computing new velocity computing 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cluster [Warning: Directory already exists.] [> In AMRexportVTK (line 17) In runme (line 68)] SUCCESS +++ exit code: 0 +++ error: 0 +++ Running case: Example-AMR +++ working dir: /Users/jenkins/workspace/macOS-Intel-Examples/nightlylog < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Coarse mesh Construction of a mesh from a given geometry Step 2: Parameterization boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero no thermal boundary conditions created: no observed temperature found Step 3: Solve! checking model consistency marshalling file /Users/jenkins/workspace/macOS-Intel-Examples//execution/mismip-08-31-2026-10-58-15-59204/mismip.bin launching solution sequence ─────────────────────────────────────────────────────────────────── Ice-sheet and Sea-level System Model (ISSM) version 2026.3 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ ─────────────────────────────────────────────────────────────────── call computational core: iteration 1/500 time [yr]: 1.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions saving temporary results refining mesh call adjust base and thickness module iteration 2/500 time [yr]: 2.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 3/500 time [yr]: 3.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 4/500 time [yr]: 4.00 (time step: 1.00) computing smb computing new velocity computing basal 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computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions saving temporary results refining mesh call adjust base and thickness module iteration 431/500 time [yr]: 431.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 432/500 time [yr]: 432.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 433/500 time [yr]: 433.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust 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computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 446/500 time [yr]: 446.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 447/500 time [yr]: 447.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 448/500 time [yr]: 448.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module 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mass balance computing mass transport computing new grounding line position updating vertices positions saving temporary results refining mesh call adjust base and thickness module iteration 491/500 time [yr]: 491.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 492/500 time [yr]: 492.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 493/500 time [yr]: 493.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 494/500 time [yr]: 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base and thickness module iteration 498/500 time [yr]: 498.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 499/500 time [yr]: 499.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 500/500 time [yr]: 500.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.071981 Total Core solution elapsed time: 125.984 Linear solver elapsed time: 37.4406 (30%) Total elapsed time: 0 hrs 2 min 6 sec loading results from cluster [Warning: Directory already exists.] [> In AMRexportVTK (line 17) In runme (line 68)] SUCCESS +++ exit code: 0 +++ error: 0 +++ Running case: Example-EsaGRACE +++ working dir: /Users/jenkins/workspace/macOS-Intel-Examples/nightlylog < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Global mesh creation Info : Running 'gmsh -2 sphere.geo' [Gmsh 4.12.2-git-eff4d1b8, 1 node, max. 1 thread] Info : Started on Mon Aug 31 11:00:36 2026 Info : Reading 'sphere.geo'... Info : Done reading 'sphere.geo' Info : Meshing 1D... Info : [ 0%] Meshing curve 1 (Circle) Info : [ 10%] Meshing curve 2 (Circle) Info : [ 20%] Meshing curve 3 (Circle) Info : [ 30%] Meshing curve 4 (Circle) Info : [ 40%] Meshing curve 5 (Circle) Info : [ 50%] Meshing curve 6 (Circle) Info : [ 50%] Meshing curve 7 (Circle) Info : [ 60%] Meshing curve 8 (Circle) Info : [ 70%] Meshing curve 9 (Circle) Info : [ 80%] Meshing curve 10 (Circle) Info : [ 90%] Meshing curve 11 (Circle) Info : [100%] Meshing curve 12 (Circle) Info : Done meshing 1D (Wall 0.00202478s, CPU 0.001701s) Info : Meshing 2D... Info : [ 0%] Meshing surface 14 (Surface, MeshAdapt) Info : [ 20%] Meshing surface 16 (Surface, MeshAdapt) Info : [ 30%] Meshing surface 18 (Surface, MeshAdapt) Info : [ 40%] Meshing surface 20 (Surface, MeshAdapt) Info : [ 50%] Meshing surface 22 (Surface, MeshAdapt) Info : [ 70%] Meshing surface 24 (Surface, MeshAdapt) Info : [ 80%] Meshing surface 26 (Surface, MeshAdapt) Info : [ 90%] Meshing surface 28 (Surface, MeshAdapt) Info : Done meshing 2D (Wall 20.1078s, CPU 20.0755s) Info : 7669 nodes 15747 elements Info : Writing 'sphere.msh'... Info : Done writing 'sphere.msh' Info : Stopped on Mon Aug 31 11:00:56 2026 (From start: Wall 20.1525s, CPU 20.1264s) gmtmask: num vertices 7668 gmtmask: done Step 2: Define loads in meters of ice height equivalent If dataset file exists at another location, modify the path in examples/Functions/grace.m Error using internal.matlab.imagesci.nc/openToRead Could not open ../Data/GRCTellus.JPL.200204_201701.LND.RL05_1.DSTvSCS1411.nc for reading. Error in internal.matlab.imagesci.nc (line 124) this.openToRead(); Error in ncread (line 71) ncObj = internal.matlab.imagesci.nc(ncFile); Error in grace (line 50) time_0=ncread(filename,'time'); % days since 2002-01-01 00:00:00 UTC Error in runme (line 33) water_load = grace(md.mesh.elements,md.mesh.lat,md.mesh.long,time_range(1),time_range(2),onvertex);FAILURE +++ exit code: 0 +++ error: 0 +++ Running case: Example-EsaGRACE +++ working dir: /Users/jenkins/workspace/macOS-Intel-Examples/nightlylog < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Global mesh creation Info : Running 'gmsh -2 sphere.geo' [Gmsh 4.12.2-git-eff4d1b8, 1 node, max. 1 thread] Info : Started on Mon Aug 31 11:00:36 2026 Info : Reading 'sphere.geo'... Info : Done reading 'sphere.geo' Info : Meshing 1D... Info : [ 0%] Meshing curve 1 (Circle) Info : [ 10%] Meshing curve 2 (Circle) Info : [ 20%] Meshing curve 3 (Circle) Info : [ 30%] Meshing curve 4 (Circle) Info : [ 40%] Meshing curve 5 (Circle) Info : [ 50%] Meshing curve 6 (Circle) Info : [ 50%] Meshing curve 7 (Circle) Info : [ 60%] Meshing curve 8 (Circle) Info : [ 70%] Meshing curve 9 (Circle) Info : [ 80%] Meshing curve 10 (Circle) Info : [ 90%] Meshing curve 11 (Circle) Info : [100%] Meshing curve 12 (Circle) Info : Done meshing 1D (Wall 0.00202478s, CPU 0.001701s) Info : Meshing 2D... Info : [ 0%] Meshing surface 14 (Surface, MeshAdapt) Info : [ 20%] Meshing surface 16 (Surface, MeshAdapt) Info : [ 30%] Meshing surface 18 (Surface, MeshAdapt) Info : [ 40%] Meshing surface 20 (Surface, MeshAdapt) Info : [ 50%] Meshing surface 22 (Surface, MeshAdapt) Info : [ 70%] Meshing surface 24 (Surface, MeshAdapt) Info : [ 80%] Meshing surface 26 (Surface, MeshAdapt) Info : [ 90%] Meshing surface 28 (Surface, MeshAdapt) Info : Done meshing 2D (Wall 20.1078s, CPU 20.0755s) Info : 7669 nodes 15747 elements Info : Writing 'sphere.msh'... Info : Done writing 'sphere.msh' Info : Stopped on Mon Aug 31 11:00:56 2026 (From start: Wall 20.1525s, CPU 20.1264s) gmtmask: num vertices 7668 gmtmask: done Step 2: Define loads in meters of ice height equivalent If dataset file exists at another location, modify the path in examples/Functions/grace.m Error using internal.matlab.imagesci.nc/openToRead Could not open ../Data/GRCTellus.JPL.200204_201701.LND.RL05_1.DSTvSCS1411.nc for reading. Error in internal.matlab.imagesci.nc (line 124) this.openToRead(); Error in ncread (line 71) ncObj = internal.matlab.imagesci.nc(ncFile); Error in grace (line 50) time_0=ncread(filename,'time'); % days since 2002-01-01 00:00:00 UTC Error in runme (line 33) water_load = grace(md.mesh.elements,md.mesh.lat,md.mesh.long,time_range(1),time_range(2),onvertex);FAILURE +++ exit code: 0 +++ error: 1 +++ Running case: Example-EsaWahr +++ working dir: /Users/jenkins/workspace/macOS-Intel-Examples/nightlylog < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Mesh creation Step 2: Anisotropic mesh creation Anisotropic mesh adaptation WARNING: mesh present but no geometry found. Reconstructing... new number of triangles = 4207 Step 3: Define loads Step 4: Parameterization [Warning: paterson is outdated, please consider using cuffey instead] [> In paterson (line 10) In runme (line 73)] Step 5: Solve Esa solver checking model consistency marshalling file /Users/jenkins/workspace/macOS-Intel-Examples//execution/EsaWahr-08-31-2026-11-01-16-59407/EsaWahr.bin launching solution sequence ─────────────────────────────────────────────────────────────────── Ice-sheet and Sea-level System Model (ISSM) version 2026.3 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ ─────────────────────────────────────────────────────────────────── starting model processor creating datasets for analysis EsaAnalysis updating elements and materials for control parameters updating elements and materials for uncertainty quantification creating output definitions done with model processor Processing finite element model of analysis EsaAnalysis: toolkits Options set for analysis: EsaAnalysis configuring element and loads Configuring elements... Configuring loads... Configuring materials... Configuring inputs... detecting active vertices resolving node constraints creating nodal degrees of freedom Renumbering degrees of freedom call computational core: computing elastic adjustment toolkits Options set for analysis: EsaAnalysis computing elastic geodetic core write lock file: FemModel initialization elapsed time: 0.134002 Total Core solution elapsed time: 0.613729 Linear solver elapsed time: 0 (0%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Step 6: Plot solutions Step 7: Compare results against Wahr semi-analytic solutions SUCCESS +++ exit code: 0 +++ error: 0 +++ Running case: Example-EsaWahr +++ working dir: /Users/jenkins/workspace/macOS-Intel-Examples/nightlylog < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Mesh creation Step 2: Anisotropic mesh creation Anisotropic mesh adaptation WARNING: mesh present but no geometry found. Reconstructing... new number of triangles = 4207 Step 3: Define loads Step 4: Parameterization [Warning: paterson is outdated, please consider using cuffey instead] [> In paterson (line 10) In runme (line 73)] Step 5: Solve Esa solver checking model consistency marshalling file /Users/jenkins/workspace/macOS-Intel-Examples//execution/EsaWahr-08-31-2026-11-01-16-59407/EsaWahr.bin launching solution sequence ─────────────────────────────────────────────────────────────────── Ice-sheet and Sea-level System Model (ISSM) version 2026.3 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ ─────────────────────────────────────────────────────────────────── starting model processor creating datasets for analysis EsaAnalysis updating elements and materials for control parameters updating elements and materials for uncertainty quantification creating output definitions done with model processor Processing finite element model of analysis EsaAnalysis: toolkits Options set for analysis: EsaAnalysis configuring element and loads Configuring elements... Configuring loads... Configuring materials... Configuring inputs... detecting active vertices resolving node constraints creating nodal degrees of freedom Renumbering degrees of freedom call computational core: computing elastic adjustment toolkits Options set for analysis: EsaAnalysis computing elastic geodetic core write lock file: FemModel initialization elapsed time: 0.134002 Total Core solution elapsed time: 0.613729 Linear solver elapsed time: 0 (0%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Step 6: Plot solutions Step 7: Compare results against Wahr semi-analytic solutions SUCCESS +++ exit code: 0 +++ error: 0 +++ Running case: Example-Greenland +++ working dir: /Users/jenkins/workspace/macOS-Intel-Examples/nightlylog < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Mesh creation Error using internal.matlab.imagesci.nc/openToRead Could not open ../Data/Greenland_5km_dev1.2.nc for reading. Error in internal.matlab.imagesci.nc (line 124) this.openToRead(); Error in ncread (line 71) ncObj = internal.matlab.imagesci.nc(ncFile); Error in runme (line 17) x1 = ncread(ncdata,'x1');FAILURE +++ exit code: 0 +++ error: 0 +++ Running case: Example-Greenland +++ working dir: /Users/jenkins/workspace/macOS-Intel-Examples/nightlylog < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Mesh creation Error using internal.matlab.imagesci.nc/openToRead Could not open ../Data/Greenland_5km_dev1.2.nc for reading. Error in internal.matlab.imagesci.nc (line 124) this.openToRead(); Error in ncread (line 71) ncObj = internal.matlab.imagesci.nc(ncFile); Error in runme (line 17) x1 = ncread(ncdata,'x1');FAILURE +++ exit code: 0 +++ error: 1 ----------MATLAB exited in error!---------- starting: AMR < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Coarse mesh Construction of a mesh from a given geometry Step 2: Parameterization boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero no thermal boundary conditions created: no observed temperature found Step 3: Solve! checking model consistency marshalling file /Users/jenkins/workspace/macOS-Intel-Examples//execution/mismip-08-31-2026-10-58-15-59204/mismip.bin launching solution sequence ─────────────────────────────────────────────────────────────────── Ice-sheet and Sea-level System Model (ISSM) version 2026.3 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ ─────────────────────────────────────────────────────────────────── call computational core: iteration 1/500 time [yr]: 1.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions saving temporary results refining mesh call adjust base and thickness module iteration 2/500 time [yr]: 2.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 3/500 time [yr]: 3.00 (time step: 1.00) computing smb computing new velocity computing basal mass balance computing mass transport computing new grounding line position updating vertices positions refining mesh call adjust base and thickness module iteration 4/500 time [yr]: 4.00 (time step: 1.00) computing smb computing new velocity computing basal 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cluster [Warning: Directory already exists.] [> In AMRexportVTK (line 17) In runme (line 68)] SUCCESS finished: AMR starting: EsaGRACE < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Global mesh creation Info : Running 'gmsh -2 sphere.geo' [Gmsh 4.12.2-git-eff4d1b8, 1 node, max. 1 thread] Info : Started on Mon Aug 31 11:00:36 2026 Info : Reading 'sphere.geo'... Info : Done reading 'sphere.geo' Info : Meshing 1D... Info : [ 0%] Meshing curve 1 (Circle) Info : [ 10%] Meshing curve 2 (Circle) Info : [ 20%] Meshing curve 3 (Circle) Info : [ 30%] Meshing curve 4 (Circle) Info : [ 40%] Meshing curve 5 (Circle) Info : [ 50%] Meshing curve 6 (Circle) Info : [ 50%] Meshing curve 7 (Circle) Info : [ 60%] Meshing curve 8 (Circle) Info : [ 70%] Meshing curve 9 (Circle) Info : [ 80%] Meshing curve 10 (Circle) Info : [ 90%] Meshing curve 11 (Circle) Info : [100%] Meshing curve 12 (Circle) Info : Done meshing 1D (Wall 0.00202478s, CPU 0.001701s) Info : Meshing 2D... Info : [ 0%] Meshing surface 14 (Surface, MeshAdapt) Info : [ 20%] Meshing surface 16 (Surface, MeshAdapt) Info : [ 30%] Meshing surface 18 (Surface, MeshAdapt) Info : [ 40%] Meshing surface 20 (Surface, MeshAdapt) Info : [ 50%] Meshing surface 22 (Surface, MeshAdapt) Info : [ 70%] Meshing surface 24 (Surface, MeshAdapt) Info : [ 80%] Meshing surface 26 (Surface, MeshAdapt) Info : [ 90%] Meshing surface 28 (Surface, MeshAdapt) Info : Done meshing 2D (Wall 20.1078s, CPU 20.0755s) Info : 7669 nodes 15747 elements Info : Writing 'sphere.msh'... Info : Done writing 'sphere.msh' Info : Stopped on Mon Aug 31 11:00:56 2026 (From start: Wall 20.1525s, CPU 20.1264s) gmtmask: num vertices 7668 gmtmask: done Step 2: Define loads in meters of ice height equivalent If dataset file exists at another location, modify the path in examples/Functions/grace.m Error using internal.matlab.imagesci.nc/openToRead Could not open ../Data/GRCTellus.JPL.200204_201701.LND.RL05_1.DSTvSCS1411.nc for reading. Error in internal.matlab.imagesci.nc (line 124) this.openToRead(); Error in ncread (line 71) ncObj = internal.matlab.imagesci.nc(ncFile); Error in grace (line 50) time_0=ncread(filename,'time'); % days since 2002-01-01 00:00:00 UTC Error in runme (line 33) water_load = grace(md.mesh.elements,md.mesh.lat,md.mesh.long,time_range(1),time_range(2),onvertex);FAILURE finished: EsaGRACE starting: EsaWahr < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Mesh creation Step 2: Anisotropic mesh creation Anisotropic mesh adaptation WARNING: mesh present but no geometry found. Reconstructing... new number of triangles = 4207 Step 3: Define loads Step 4: Parameterization [Warning: paterson is outdated, please consider using cuffey instead] [> In paterson (line 10) In runme (line 73)] Step 5: Solve Esa solver checking model consistency marshalling file /Users/jenkins/workspace/macOS-Intel-Examples//execution/EsaWahr-08-31-2026-11-01-16-59407/EsaWahr.bin launching solution sequence ─────────────────────────────────────────────────────────────────── Ice-sheet and Sea-level System Model (ISSM) version 2026.3 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ ─────────────────────────────────────────────────────────────────── starting model processor creating datasets for analysis EsaAnalysis updating elements and materials for control parameters updating elements and materials for uncertainty quantification creating output definitions done with model processor Processing finite element model of analysis EsaAnalysis: toolkits Options set for analysis: EsaAnalysis configuring element and loads Configuring elements... Configuring loads... Configuring materials... Configuring inputs... detecting active vertices resolving node constraints creating nodal degrees of freedom Renumbering degrees of freedom call computational core: computing elastic adjustment toolkits Options set for analysis: EsaAnalysis computing elastic geodetic core write lock file: FemModel initialization elapsed time: 0.134002 Total Core solution elapsed time: 0.613729 Linear solver elapsed time: 0 (0%) Total elapsed time: 0 hrs 0 min 0 sec WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 7 unused database options. They are: Option left: name:-ksp_type value: preonly source: code Option left: name:-mat_mumps_icntl_14 value: 120 source: code Option left: name:-mat_mumps_icntl_28 value: 2 source: code Option left: name:-mat_mumps_icntl_29 value: 2 source: code Option left: name:-mat_type value: mpiaij source: code Option left: name:-pc_factor_mat_solver_type value: mumps source: code Option left: name:-pc_type value: lu source: code loading results from cluster Step 6: Plot solutions Step 7: Compare results against Wahr semi-analytic solutions SUCCESS finished: EsaWahr starting: Greenland < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 6 (23.2.0.2485118) 64-bit (maci64) December 28, 2023 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded Step 1: Mesh creation Error using internal.matlab.imagesci.nc/openToRead Could not open ../Data/Greenland_5km_dev1.2.nc for reading. Error in internal.matlab.imagesci.nc (line 124) this.openToRead(); Error in ncread (line 71) ncObj = internal.matlab.imagesci.nc(ncFile); Error in runme (line 17) x1 = ncread(ncdata,'x1');FAILURE finished: Greenland -----------End of matlab_log.log----------- Build step 'Execute shell' marked build as failure Recording test results Finished: FAILURE