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Started by GitHub push by MathieuMorlighem Started by GitHub push by MathieuMorlighem Started by GitHub push by MathieuMorlighem Running as SYSTEM Building remotely on Debian_12-VM (debian linux) in workspace /home/jenkins/workspace/Debian_Linux-Ice-Ocean The recommended git tool is: NONE using credential 3c85c82b-fb35-4fea-b703-0aa4f155f9c7 > git rev-parse --resolve-git-dir /home/jenkins/workspace/Debian_Linux-Ice-Ocean/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10 Fetching upstream changes from git@github.com:ISSMteam/ISSM.git > git --version # timeout=10 > git --version # 'git version 2.39.2' using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins Verifying host key using known hosts file > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/main^{commit} # timeout=10 Checking out Revision 13ff1be188e40fa6fce1dcba6e9147c419560d8d (refs/remotes/origin/main) > git config core.sparsecheckout # timeout=10 > git checkout -f 13ff1be188e40fa6fce1dcba6e9147c419560d8d # timeout=10 Commit message: "BUG: bad python syntax" > git rev-list --no-walk 85a370c4e8f19f3e5557f71faff3e6d062e9077e # timeout=10 [Debian_Linux-Ice-Ocean] $ /bin/bash /tmp/jenkins4708822734512851620.sh Cleaning up execution directory ====================================================== Determining installation type ====================================================== List of changed files --------------------- m4/issm_options.m4 src/m/classes/stressbalance.py src/wrappers/python/Makefile.am -- checking for changed externalpackages... no -- checking for reconfiguration... yes -- checking for recompilation... yes ====================================================== Skipping autotools ====================================================== ====================================================== Skipping cmake ====================================================== ====================================================== Skipping petsc ====================================================== ====================================================== Skipping triangle ====================================================== ====================================================== Skipping m1qn3 ====================================================== ====================================================== Skipping semic ====================================================== ====================================================== Skipping shell2junit ====================================================== ====================================================== Cleaning up and reconfiguring ====================================================== CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config/missing aclocal-1.16 -I m4 cd . && /bin/bash /home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config/missing automake-1.16 --foreign CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config/missing autoconf /bin/bash ./config.status --recheck running CONFIG_SHELL=/bin/bash /bin/bash ./configure --prefix=/home/jenkins/workspace/Debian_Linux-Ice-Ocean --disable-static --enable-development --enable-debugging --with-ocean --with-numthreads=4 --with-matlab-dir=/usr/local/MATLAB/R2023b --with-fortran-lib=-L/usr/lib/x86_64-linux-gnu -lgfortran --with-mpi-include=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include --with-mpi-libflags=-L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort --with-blas-lapack-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-metis-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-parmetis-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-scalapack-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-mumps-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-petsc-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install --with-triangle-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/triangle/install --with-m1qn3-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/m1qn3/install --with-semic-dir=/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/semic/install --no-create --no-recursion configure: ============================================================================ configure: = Ice-sheet and Sea-level System Model (ISSM) 4.24 configuration = configure: ============================================================================ checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking for icc... no checking for cl... no checking for icl... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking how to run the C preprocessor... gcc -E checking for icpc... no checking for cl... no checking for icl... no checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for ifort... no checking for g77... no checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking for ifort... no checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of gcc... gcc3 checking dependency style of g++... gcc3 checking whether make supports nested variables... (cached) yes checking for ar... ar checking the archiver (ar) interface... ar checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: ============================================================================ configure: = Checking ISSM specific options = configure: ============================================================================ checking for date... /usr/bin/date checking for build date... Thu Sep 12 12:40:53 PDT 2024 checking user name... jenkins checking host full OS name and version... linux checking host cpu... x86_64 checking vendor... pc checking host OS name... linux checking host OS version... 6.1.0-21-amd64 checking host OS architecture... x86_64 checking for debugging support... yes checking for development support... yes checking for standalone modules build... no checking for standalone executables build... no checking for standalone libraries build... no checking for wrappers compilation... yes checking operating system type... Linux checking for MATLAB... yes checking MATLAB's mex compilation flags... done checking for JavaScript... no checking for triangle... yes checking for Boost... no checking for Dakota... no checking for Python... no checking for python-numpy... no checking for Chaco... no checking for ESMF... no checking for CoDiPack... no checking for tape allocation... no checking for ADOL-C... no checking for ADOL-C version... 2 checking for ATLAS and CBLAS libraries... no checking for GSL... no checking for AMPI... no checking for Adjoint MPI... no checking for MeDiPack... no checking for HDF5 libraries... no checking for PETSc... yes checking for PETSc version... 3.20 checking whether PETSc is the development version... no checking for PETSc libraries and header files in /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install... done checking for MPI... yes checking for SCOTCH... no checking for METIS... yes checking for ParMETIS... yes checking for TAO... yes checking for M1QN3... yes checking for PROJ... no checking for shapelib... no checking for ScaLAPACK... yes checking for BLAS/LAPACK... yes checking for MKL... no checking for PlaLAPACK... no checking for MPLAPACK... no checking for MUMPS... yes checking for BLACS... no checking for HYPRE... no checking for Prometheus... no checking for SEMIC... yes checking for SPAI... no checking for SuperLU... no checking for SPOOLES... no checking for PaStiX... no checking for ml... no checking for UMFPACK... no checking for libm... done checking for MATH77... no checking for Fortran compilation... yes checking for Fortran library... done checking for MeteoIO... no checking for SNOWPACK... no checking for NeoPZ... no checking for Gmsh... no checking for BAMG capability compilation... yes checking for ice/ocean coupling capability compilation... yes checking for kml capability compilation... no checking for kriging capability compilation... yes checking for HydrologyTws capability compilation... yes checking for AdjointBalancethickness2 capability compilation... yes checking for AdjointBalancethickness capability compilation... yes checking for AdjointHoriz capability compilation... yes checking for Age capability compilation... yes checking for Balancethickness2 capability compilation... yes checking for Balancethickness capability compilation... yes checking for BalancethicknessSoft capability compilation... yes checking for Balancevelocity capability compilation... yes checking for DamageEvolution capability compilation... yes checking for Debris capability compilation... yes checking for DepthAverage capability compilation... yes checking for Enthalpy capability compilation... yes checking for Esa capability compilation... yes checking for Extrapolation capability compilation... yes checking for ExtrudeFromBase capability compilation... yes checking for ExtrudeFromTop capability compilation... yes checking for FreeSurfaceBase capability compilation... yes checking for FreeSurfaceTop capability compilation... yes checking for GLheightadvection capability compilation... yes checking for HydrologyDCEfficient capability compilation... yes checking for HydrologyDCInefficient capability compilation... yes checking for HydrologyGlaDS capability compilation... yes checking for HydrologyPism capability compilation... yes checking for HydrologyShakti capability compilation... yes checking for HydrologyShreve capability compilation... yes checking for HydrologyArmapw capability compilation... yes checking for L2ProjectionBase capability compilation... yes checking for L2ProjectionEPL capability compilation... yes checking for Levelset capability compilation... yes checking for Love capability compilation... yes checking for Masstransport capability compilation... yes checking for Melting capability compilation... yes checking for Oceantransport capability compilation... yes checking for Recovery capability compilation... yes checking for Sampling capability compilation... yes checking for Sealevelchange capability compilation... yes checking for Smb capability compilation... yes checking for Smooth capability compilation... yes checking for Stressbalance capability compilation... yes checking for StressbalanceSIA capability compilation... yes checking for StressbalanceVertical capability compilation... yes checking for Thermal capability compilation... yes checking for UzawaPressure capability compilation... yes checking for number of threads... 4 checking for 64-bit indices... 0 checking consistency between all external packages... done checking for C++ optimization flags... DEPRECATED checking that generated files are newer than configure... done configure: creating ./config.status /bin/bash ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/c/Makefile config.status: creating src/wrappers/Makefile config.status: creating src/wrappers/python/Makefile config.status: creating src/wrappers/matlab/Makefile config.status: creating src/wrappers/javascript/Makefile config.status: creating src/m/Makefile config.status: creating ./config.h config.status: executing depfiles commands config.status: executing libtool commands Making uninstall in src make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' Making uninstall in c make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' ( cd '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin' && rm -f issm.exe issm_slc.exe issm_ocean.exe kriging.exe ) /bin/bash ../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so /bin/bash ../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so /bin/bash ../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' Making uninstall in m make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' Making uninstall in wrappers make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' Making uninstall in matlab make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.so /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64 /bin/bash ../../../libtool --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.la' libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64 make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[3]: Nothing to be done for 'uninstall-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[2]: Nothing to be done for 'uninstall-am'. make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[1]: Nothing to be done for 'uninstall-am'. make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' Making distclean in src make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' Making distclean in c make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' rm -f issm.exe issm_slc.exe issm_ocean.exe kriging.exe rm -f issm issm_slc issm_ocean kriging test -z "libISSMCore.la libISSMOverload.la libISSMModules.la" || rm -f libISSMCore.la libISSMOverload.la libISSMModules.la rm -f ./so_locations rm -rf .libs _libs rm -rf ./analyses/.libs ./analyses/_libs rm -rf ./bamg/.libs ./bamg/_libs rm -rf ./classes/.libs ./classes/_libs rm -rf ./classes/Constraints/.libs ./classes/Constraints/_libs rm -rf ./classes/Dakota/.libs ./classes/Dakota/_libs rm -rf ./classes/Elements/.libs ./classes/Elements/_libs rm -rf ./classes/ExternalResults/.libs ./classes/ExternalResults/_libs rm -rf ./classes/Inputs/.libs ./classes/Inputs/_libs rm -rf ./classes/Loads/.libs ./classes/Loads/_libs rm -rf ./classes/Materials/.libs ./classes/Materials/_libs rm -rf ./classes/Options/.libs ./classes/Options/_libs rm -rf ./classes/Params/.libs ./classes/Params/_libs rm -rf ./classes/gauss/.libs ./classes/gauss/_libs rm -rf ./classes/kriging/.libs ./classes/kriging/_libs rm -rf ./classes/matrix/.libs ./classes/matrix/_libs rm -rf ./cores/.libs ./cores/_libs rm -rf ./datastructures/.libs ./datastructures/_libs rm -rf ./kml/.libs ./kml/_libs rm -rf ./main/.libs ./main/_libs rm -rf ./modules/AllocateSystemMatricesx/.libs ./modules/AllocateSystemMatricesx/_libs rm -rf ./modules/AverageOntoPartitionx/.libs ./modules/AverageOntoPartitionx/_libs rm -rf ./modules/BamgConvertMeshx/.libs ./modules/BamgConvertMeshx/_libs rm -rf ./modules/BamgTriangulatex/.libs ./modules/BamgTriangulatex/_libs rm -rf ./modules/Bamgx/.libs ./modules/Bamgx/_libs rm -rf ./modules/Calvingx/.libs ./modules/Calvingx/_libs rm -rf ./modules/Chacox/.libs ./modules/Chacox/_libs rm -rf ./modules/ConfigureObjectsx/.libs ./modules/ConfigureObjectsx/_libs rm -rf ./modules/ConstraintsStatex/.libs ./modules/ConstraintsStatex/_libs rm -rf ./modules/ContourToMeshx/.libs ./modules/ContourToMeshx/_libs rm -rf 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-f ./toolkits/petsc/patches/.deps/libISSMCore_la-MatToMPISerial.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-NewMat.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-NewVec.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-PetscOptionsDetermineSolverType.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-VecFree.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-VecToMPISerial.Plo rm -f main/.deps/issm-issm.Po rm -f main/.deps/issm_dakota-issm_dakota.Po rm -f main/.deps/issm_ocean-issm_ocean.Po rm -f main/.deps/issm_post-issm_post.Po rm -f main/.deps/issm_slc-issm_slc.Po rm -f main/.deps/kriging-kriging.Po rm -f Makefile make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' Making distclean in m make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' rm -rf .libs _libs rm -f *.lo test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f Makefile make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' Making distclean in wrappers make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' Making distclean in matlab make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' test -z "libISSMMatlab.la libISSMApi.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la M1qn3_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la Kriging_matlab.la " || rm -f libISSMMatlab.la libISSMApi.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la M1qn3_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la Kriging_matlab.la rm -f ./so_locations rm -rf .libs _libs rm -rf ../BamgConvertMesh/.libs ../BamgConvertMesh/_libs rm -rf ../BamgMesher/.libs ../BamgMesher/_libs rm -rf ../BamgTriangulate/.libs ../BamgTriangulate/_libs rm -rf ../Chaco/.libs ../Chaco/_libs rm -rf ../ContourToMesh/.libs ../ContourToMesh/_libs rm -rf ../ContourToNodes/.libs ../ContourToNodes/_libs rm -rf ../CoordTransform/.libs ../CoordTransform/_libs rm -rf ../DistanceToMaskBoundary/.libs ../DistanceToMaskBoundary/_libs rm -rf ../ElementConnectivity/.libs ../ElementConnectivity/_libs rm -rf ../ExpSimplify/.libs ../ExpSimplify/_libs rm -rf ../ExpToLevelSet/.libs ../ExpToLevelSet/_libs rm -rf ../InterpFromGridToMesh/.libs ../InterpFromGridToMesh/_libs rm -rf ../InterpFromMesh2d/.libs ../InterpFromMesh2d/_libs rm -rf ../InterpFromMeshToGrid/.libs ../InterpFromMeshToGrid/_libs rm -rf ../InterpFromMeshToMesh2d/.libs ../InterpFromMeshToMesh2d/_libs rm -rf ../InterpFromMeshToMesh3d/.libs ../InterpFromMeshToMesh3d/_libs rm -rf ../IssmConfig/.libs ../IssmConfig/_libs rm -rf ../Kriging/.libs ../Kriging/_libs rm -rf ../M1qn3/.libs ../M1qn3/_libs rm -rf ../MeshPartition/.libs ../MeshPartition/_libs rm -rf ../MeshProfileIntersection/.libs ../MeshProfileIntersection/_libs rm -rf ../NodeConnectivity/.libs ../NodeConnectivity/_libs rm -rf ../PointCloudFindNeighbors/.libs ../PointCloudFindNeighbors/_libs rm -rf ../ProcessRifts/.libs ../ProcessRifts/_libs rm -rf ../PropagateFlagsFromConnectivity/.libs ../PropagateFlagsFromConnectivity/_libs rm -rf ../Scotch/.libs ../Scotch/_libs rm -rf ../ShpRead/.libs ../ShpRead/_libs rm -rf ../Triangle/.libs ../Triangle/_libs rm -rf ./io/.libs ./io/_libs rm -f *.o rm -f ../BamgConvertMesh/*.o rm -f ../BamgConvertMesh/*.lo rm -f ../BamgMesher/*.o rm -f ../BamgMesher/*.lo rm -f ../BamgTriangulate/*.o rm -f ../BamgTriangulate/*.lo rm -f ../Chaco/*.o rm -f ../Chaco/*.lo rm -f ../ContourToMesh/*.o rm -f ../ContourToMesh/*.lo rm -f ../ContourToNodes/*.o rm -f ../ContourToNodes/*.lo rm -f ../CoordTransform/*.o rm -f ../CoordTransform/*.lo rm -f ../DistanceToMaskBoundary/*.o rm -f ../DistanceToMaskBoundary/*.lo rm -f ../ElementConnectivity/*.o rm -f ../ElementConnectivity/*.lo rm -f ../ExpSimplify/*.o rm -f ../ExpSimplify/*.lo rm -f ../ExpToLevelSet/*.o rm -f ../ExpToLevelSet/*.lo rm -f ../InterpFromGridToMesh/*.o rm -f ../InterpFromGridToMesh/*.lo rm -f ../InterpFromMesh2d/*.o rm -f ../InterpFromMesh2d/*.lo rm -f ../InterpFromMeshToGrid/*.o rm -f ../InterpFromMeshToGrid/*.lo rm -f ../InterpFromMeshToMesh2d/*.o rm -f ../InterpFromMeshToMesh2d/*.lo rm -f ../InterpFromMeshToMesh3d/*.o rm -f ../InterpFromMeshToMesh3d/*.lo rm -f ../IssmConfig/*.o rm -f ../IssmConfig/*.lo rm -f ../Kriging/*.o rm -f ../Kriging/*.lo rm -f ../M1qn3/*.o rm -f ../M1qn3/*.lo rm -f ../MeshPartition/*.o rm -f ../MeshPartition/*.lo rm -f ../MeshProfileIntersection/*.o rm -f ../MeshProfileIntersection/*.lo rm -f ../NodeConnectivity/*.o rm -f ../NodeConnectivity/*.lo rm -f ../PointCloudFindNeighbors/*.o rm -f ../PointCloudFindNeighbors/*.lo rm -f ../ProcessRifts/*.o rm -f ../ProcessRifts/*.lo rm -f ../PropagateFlagsFromConnectivity/*.o rm -f ../PropagateFlagsFromConnectivity/*.lo rm -f ../Scotch/*.o rm -f ../Scotch/*.lo rm -f ../ShpRead/*.o rm -f ../ShpRead/*.lo rm -f ../Triangle/*.o rm -f ../Triangle/*.lo rm -f ./io/*.o rm -f ./io/*.lo rm -f *.lo rm -f *.tab.c test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f ../BamgConvertMesh/.deps/.dirstamp rm -f ../BamgConvertMesh/.dirstamp rm -f ../BamgMesher/.deps/.dirstamp rm -f ../BamgMesher/.dirstamp rm -f ../BamgTriangulate/.deps/.dirstamp rm -f ../BamgTriangulate/.dirstamp rm -f ../Chaco/.deps/.dirstamp rm -f ../Chaco/.dirstamp rm -f ../ContourToMesh/.deps/.dirstamp rm -f ../ContourToMesh/.dirstamp rm -f ../ContourToNodes/.deps/.dirstamp rm -f ../ContourToNodes/.dirstamp rm -f ../CoordTransform/.deps/.dirstamp rm -f ../CoordTransform/.dirstamp rm -f ../DistanceToMaskBoundary/.deps/.dirstamp rm -f ../DistanceToMaskBoundary/.dirstamp rm -f ../ElementConnectivity/.deps/.dirstamp rm -f ../ElementConnectivity/.dirstamp rm -f ../ExpSimplify/.deps/.dirstamp rm -f ../ExpSimplify/.dirstamp rm -f ../ExpToLevelSet/.deps/.dirstamp rm -f ../ExpToLevelSet/.dirstamp rm -f ../InterpFromGridToMesh/.deps/.dirstamp rm -f ../InterpFromGridToMesh/.dirstamp rm -f ../InterpFromMesh2d/.deps/.dirstamp rm -f ../InterpFromMesh2d/.dirstamp rm -f ../InterpFromMeshToGrid/.deps/.dirstamp rm -f ../InterpFromMeshToGrid/.dirstamp rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp rm -f ../InterpFromMeshToMesh2d/.dirstamp rm -f ../InterpFromMeshToMesh3d/.deps/.dirstamp rm -f ../InterpFromMeshToMesh3d/.dirstamp rm -f ../IssmConfig/.deps/.dirstamp rm -f ../IssmConfig/.dirstamp rm -f ../Kriging/.deps/.dirstamp rm -f ../Kriging/.dirstamp rm -f ../M1qn3/.deps/.dirstamp rm -f ../M1qn3/.dirstamp rm -f ../MeshPartition/.deps/.dirstamp rm -f ../MeshPartition/.dirstamp rm -f ../MeshProfileIntersection/.deps/.dirstamp rm -f ../MeshProfileIntersection/.dirstamp rm -f ../NodeConnectivity/.deps/.dirstamp rm -f ../NodeConnectivity/.dirstamp rm -f ../PointCloudFindNeighbors/.deps/.dirstamp rm -f ../PointCloudFindNeighbors/.dirstamp rm -f ../ProcessRifts/.deps/.dirstamp rm -f ../ProcessRifts/.dirstamp rm -f ../PropagateFlagsFromConnectivity/.deps/.dirstamp rm -f ../PropagateFlagsFromConnectivity/.dirstamp rm -f ../Scotch/.deps/.dirstamp rm -f ../Scotch/.dirstamp rm -f ../ShpRead/.deps/.dirstamp rm -f ../ShpRead/.dirstamp rm -f ../Triangle/.deps/.dirstamp rm -f ../Triangle/.dirstamp rm -f io/.deps/.dirstamp rm -f io/.dirstamp rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags rm -f ../BamgConvertMesh/.deps/BamgConvertMesh_matlab_la-BamgConvertMesh.Plo rm -f ../BamgMesher/.deps/BamgMesher_matlab_la-BamgMesher.Plo rm -f ../BamgTriangulate/.deps/BamgTriangulate_matlab_la-BamgTriangulate.Plo rm -f ../Chaco/.deps/Chaco_matlab_la-Chaco.Plo rm -f ../ContourToMesh/.deps/ContourToMesh_matlab_la-ContourToMesh.Plo rm -f ../ContourToNodes/.deps/ContourToNodes_matlab_la-ContourToNodes.Plo rm -f ../CoordTransform/.deps/CoordTransform_matlab_la-CoordTransform.Plo rm -f ../DistanceToMaskBoundary/.deps/DistanceToMaskBoundary_matlab_la-DistanceToMaskBoundary.Plo rm -f ../ElementConnectivity/.deps/ElementConnectivity_matlab_la-ElementConnectivity.Plo rm -f ../ExpSimplify/.deps/ExpSimplify_matlab_la-ExpSimplify.Plo rm -f ../ExpToLevelSet/.deps/ExpToLevelSet_matlab_la-ExpToLevelSet.Plo rm -f ../InterpFromGridToMesh/.deps/InterpFromGridToMesh_matlab_la-InterpFromGridToMesh.Plo rm -f ../InterpFromMesh2d/.deps/InterpFromMesh2d_matlab_la-InterpFromMesh2d.Plo rm -f ../InterpFromMeshToGrid/.deps/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.Plo rm -f ../InterpFromMeshToMesh2d/.deps/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.Plo rm -f ../InterpFromMeshToMesh3d/.deps/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.Plo rm -f ../IssmConfig/.deps/IssmConfig_matlab_la-IssmConfig.Plo rm -f ../Kriging/.deps/Kriging_matlab_la-Kriging.Plo rm -f ../M1qn3/.deps/M1qn3_matlab_la-M1qn3.Plo rm -f ../MeshPartition/.deps/MeshPartition_matlab_la-MeshPartition.Plo rm -f ../MeshProfileIntersection/.deps/MeshProfileIntersection_matlab_la-MeshProfileIntersection.Plo rm -f ../NodeConnectivity/.deps/NodeConnectivity_matlab_la-NodeConnectivity.Plo rm -f ../PointCloudFindNeighbors/.deps/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.Plo rm -f ../ProcessRifts/.deps/ProcessRifts_matlab_la-ProcessRifts.Plo rm -f ../PropagateFlagsFromConnectivity/.deps/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.Plo rm -f ../Scotch/.deps/Scotch_matlab_la-Scotch.Plo rm -f ../ShpRead/.deps/ShpRead_matlab_la-ShpRead.Plo rm -f ../Triangle/.deps/Triangle_matlab_la-Triangle.Plo rm -f ./io/.deps/libISSMApi_la-ApiPrintf.Plo rm -f ./io/.deps/libISSMMatlab_la-CheckNumMatlabArguments.Plo rm -f ./io/.deps/libISSMMatlab_la-FetchMatlabData.Plo rm -f ./io/.deps/libISSMMatlab_la-WriteMatlabData.Plo rm -f Makefile make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' Making distclean in javascript make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/javascript' rm -f IssmModule.js rm -f IssmModule test -z "libISSMJavascript.la libISSMApi.la" || rm -f libISSMJavascript.la libISSMApi.la rm -f ./so_locations rm -rf .libs _libs rm -rf ./io/.libs ./io/_libs rm -f *.o rm -f ../BamgMesher/*.o rm -f ../ContourToMesh/*.o rm -f ../ElementConnectivity/*.o rm -f ../InterpFromGridToMesh/*.o rm -f ../InterpFromMeshToMesh2d/*.o rm -f ../Issm/*.o rm -f ../IssmConfig/*.o rm -f ../NodeConnectivity/*.o rm -f ../Triangle/*.o rm -f ./io/*.o rm -f ./io/*.lo rm -f *.lo rm -f *.tab.c test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f ../BamgMesher/.deps/.dirstamp rm -f ../BamgMesher/.dirstamp rm -f ../ContourToMesh/.deps/.dirstamp rm -f ../ContourToMesh/.dirstamp rm -f ../ElementConnectivity/.deps/.dirstamp rm -f ../ElementConnectivity/.dirstamp rm -f ../InterpFromGridToMesh/.deps/.dirstamp rm -f ../InterpFromGridToMesh/.dirstamp rm -f 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rm -f ./io/.deps/libISSMJavascript_la-FetchJavascriptData.Plo rm -f ./io/.deps/libISSMJavascript_la-WriteJavascriptData.Plo rm -f Makefile make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/javascript' Making distclean in python make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/python' test -z "libISSMPython.la libISSMApi.la BamgConvertMesh_python.la BamgMesher_python.la BamgTriangulate_python.la ContourToMesh_python.la ContourToNodes_python.la ElementConnectivity_python.la ExpToLevelSet_python.la InterpFromGridToMesh_python.la InterpFromMesh2d_python.la InterpFromMeshToGrid_python.la InterpFromMeshToMesh2d_python.la InterpFromMeshToMesh3d_python.la IssmConfig_python.la MeshPartition_python.la MeshProfileIntersection_python.la NodeConnectivity_python.la Triangle_python.la ProcessRifts_python.la " || rm -f libISSMPython.la libISSMApi.la BamgConvertMesh_python.la BamgMesher_python.la BamgTriangulate_python.la ContourToMesh_python.la ContourToNodes_python.la ElementConnectivity_python.la ExpToLevelSet_python.la InterpFromGridToMesh_python.la InterpFromMesh2d_python.la InterpFromMeshToGrid_python.la InterpFromMeshToMesh2d_python.la InterpFromMeshToMesh3d_python.la IssmConfig_python.la MeshPartition_python.la MeshProfileIntersection_python.la NodeConnectivity_python.la Triangle_python.la ProcessRifts_python.la rm -f ./so_locations rm -rf .libs _libs rm -rf ../BamgConvertMesh/.libs ../BamgConvertMesh/_libs rm -rf ../BamgMesher/.libs ../BamgMesher/_libs rm -rf ../BamgTriangulate/.libs ../BamgTriangulate/_libs rm -rf ../Chaco/.libs ../Chaco/_libs rm -rf ../ContourToMesh/.libs ../ContourToMesh/_libs rm -rf ../ContourToNodes/.libs ../ContourToNodes/_libs rm -rf ../ElementConnectivity/.libs ../ElementConnectivity/_libs rm -rf ../ExpToLevelSet/.libs ../ExpToLevelSet/_libs rm -rf ../InterpFromGridToMesh/.libs ../InterpFromGridToMesh/_libs rm -rf ../InterpFromMesh2d/.libs ../InterpFromMesh2d/_libs rm -rf ../InterpFromMeshToGrid/.libs ../InterpFromMeshToGrid/_libs rm -rf ../InterpFromMeshToMesh2d/.libs ../InterpFromMeshToMesh2d/_libs rm -rf ../InterpFromMeshToMesh3d/.libs ../InterpFromMeshToMesh3d/_libs rm -rf ../IssmConfig/.libs ../IssmConfig/_libs rm -rf ../MeshPartition/.libs ../MeshPartition/_libs rm -rf ../MeshProfileIntersection/.libs ../MeshProfileIntersection/_libs rm -rf ../NodeConnectivity/.libs ../NodeConnectivity/_libs rm -rf ../ProcessRifts/.libs ../ProcessRifts/_libs rm -rf ../Triangle/.libs ../Triangle/_libs rm -rf ./io/.libs ./io/_libs rm -f *.o rm -f ../BamgConvertMesh/*.o rm -f ../BamgConvertMesh/*.lo rm -f ../BamgMesher/*.o rm -f ../BamgMesher/*.lo rm -f ../BamgTriangulate/*.o rm -f ../BamgTriangulate/*.lo rm -f ../Chaco/*.o rm -f ../Chaco/*.lo rm -f ../ContourToMesh/*.o rm -f ../ContourToMesh/*.lo rm -f ../ContourToNodes/*.o rm -f ../ContourToNodes/*.lo rm -f ../ElementConnectivity/*.o rm -f ../ElementConnectivity/*.lo rm -f ../ExpToLevelSet/*.o rm -f ../ExpToLevelSet/*.lo rm -f ../InterpFromGridToMesh/*.o rm -f ../InterpFromGridToMesh/*.lo rm -f ../InterpFromMesh2d/*.o rm -f ../InterpFromMesh2d/*.lo rm -f ../InterpFromMeshToGrid/*.o rm -f ../InterpFromMeshToGrid/*.lo rm -f ../InterpFromMeshToMesh2d/*.o rm -f ../InterpFromMeshToMesh2d/*.lo rm -f ../InterpFromMeshToMesh3d/*.o rm -f ../InterpFromMeshToMesh3d/*.lo rm -f ../IssmConfig/*.o rm -f ../IssmConfig/*.lo rm -f ../MeshPartition/*.o rm -f ../MeshPartition/*.lo rm -f ../MeshProfileIntersection/*.o rm -f ../MeshProfileIntersection/*.lo rm -f ../NodeConnectivity/*.o rm -f ../NodeConnectivity/*.lo rm -f ../ProcessRifts/*.o rm -f ../ProcessRifts/*.lo rm -f ../Triangle/*.o rm -f ../Triangle/*.lo rm -f ./io/*.o rm -f ./io/*.lo rm -f *.lo rm -f *.tab.c test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f ../BamgConvertMesh/.deps/.dirstamp rm -f ../BamgConvertMesh/.dirstamp rm -f ../BamgMesher/.deps/.dirstamp rm -f ../BamgMesher/.dirstamp rm -f ../BamgTriangulate/.deps/.dirstamp rm -f ../BamgTriangulate/.dirstamp rm -f ../Chaco/.deps/.dirstamp rm -f ../Chaco/.dirstamp rm -f ../ContourToMesh/.deps/.dirstamp rm -f ../ContourToMesh/.dirstamp rm -f ../ContourToNodes/.deps/.dirstamp rm -f ../ContourToNodes/.dirstamp rm -f ../ElementConnectivity/.deps/.dirstamp rm -f ../ElementConnectivity/.dirstamp rm -f ../ExpToLevelSet/.deps/.dirstamp rm -f ../ExpToLevelSet/.dirstamp rm -f ../InterpFromGridToMesh/.deps/.dirstamp rm -f ../InterpFromGridToMesh/.dirstamp rm -f ../InterpFromMesh2d/.deps/.dirstamp rm -f ../InterpFromMesh2d/.dirstamp rm -f ../InterpFromMeshToGrid/.deps/.dirstamp rm -f ../InterpFromMeshToGrid/.dirstamp rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp rm -f ../InterpFromMeshToMesh2d/.dirstamp rm -f ../InterpFromMeshToMesh3d/.deps/.dirstamp rm -f ../InterpFromMeshToMesh3d/.dirstamp rm -f ../IssmConfig/.deps/.dirstamp rm -f ../IssmConfig/.dirstamp rm -f ../MeshPartition/.deps/.dirstamp rm -f ../MeshPartition/.dirstamp rm -f 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../InterpFromGridToMesh/.deps/InterpFromGridToMesh_python_la-InterpFromGridToMesh.Plo rm -f ../InterpFromMesh2d/.deps/InterpFromMesh2d_python_la-InterpFromMesh2d.Plo rm -f ../InterpFromMeshToGrid/.deps/InterpFromMeshToGrid_python_la-InterpFromMeshToGrid.Plo rm -f ../InterpFromMeshToMesh2d/.deps/InterpFromMeshToMesh2d_python_la-InterpFromMeshToMesh2d.Plo rm -f ../InterpFromMeshToMesh3d/.deps/InterpFromMeshToMesh3d_python_la-InterpFromMeshToMesh3d.Plo rm -f ../IssmConfig/.deps/IssmConfig_python_la-IssmConfig.Plo rm -f ../MeshPartition/.deps/MeshPartition_python_la-MeshPartition.Plo rm -f ../MeshProfileIntersection/.deps/MeshProfileIntersection_python_la-MeshProfileIntersection.Plo rm -f ../NodeConnectivity/.deps/NodeConnectivity_python_la-NodeConnectivity.Plo rm -f ../ProcessRifts/.deps/ProcessRifts_python_la-ProcessRifts.Plo rm -f ../Triangle/.deps/Triangle_python_la-Triangle.Plo rm -f ./io/.deps/libISSMApi_la-ApiPrintf.Plo rm -f ./io/.deps/libISSMPython_la-CheckNumPythonArguments.Plo 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'/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' rm -rf .libs _libs rm -f *.lo test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f config.h stamp-h1 rm -f libtool config.lt rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags rm -f cscope.out cscope.in.out cscope.po.out cscope.files make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' rm -f config.status config.cache config.log configure.lineno config.status.lineno rm -f Makefile autoreconf: Entering directory `.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force -I m4 autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, './aux-config'. libtoolize: copying file './aux-config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' autoreconf: running: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin/autoconf --force autoreconf: running: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin/autoheader --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:17: installing './aux-config/compile' configure.ac:24: installing './aux-config/missing' src/c/Makefile.am: installing './aux-config/depcomp' autoreconf: Leaving directory `.' configure: ============================================================================ configure: = Ice-sheet and Sea-level System Model (ISSM) 4.24 configuration = configure: ============================================================================ checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking for icc... no checking for cl... no checking for icl... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking how to run the C preprocessor... gcc -E checking for icpc... no checking for cl... no checking for icl... no checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for ifort... no checking for g77... no checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking 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(cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: ============================================================================ configure: = Checking ISSM specific options = configure: ============================================================================ checking for date... /usr/bin/date checking for build date... Thu Sep 12 12:41:32 PDT 2024 checking user name... jenkins checking host full OS name and version... linux checking host cpu... x86_64 checking vendor... pc checking host OS name... linux checking host OS version... 6.1.0-21-amd64 checking host OS architecture... x86_64 checking for debugging support... yes checking for development support... yes checking for standalone modules build... no checking for standalone executables build... no checking for standalone libraries build... no checking for wrappers compilation... yes checking operating system type... Linux checking for MATLAB... yes checking MATLAB's mex compilation flags... done checking for JavaScript... no checking for triangle... yes checking for Boost... no checking for Dakota... no checking for Python... no checking for python-numpy... no checking for Chaco... no checking for ESMF... no checking for CoDiPack... no checking for tape allocation... no checking for ADOL-C... no checking for ADOL-C version... 2 checking for ATLAS and CBLAS libraries... no checking for GSL... no checking for AMPI... no checking for Adjoint MPI... no checking for MeDiPack... no checking for HDF5 libraries... no checking for PETSc... yes checking for PETSc version... 3.20 checking whether PETSc is the development version... no checking for PETSc libraries and header files in /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install... done checking for MPI... yes checking for SCOTCH... no checking for METIS... yes checking for ParMETIS... yes checking for TAO... yes checking for M1QN3... yes checking for PROJ... no checking for shapelib... no checking for ScaLAPACK... yes checking for BLAS/LAPACK... yes checking for MKL... no checking for PlaLAPACK... no checking for MPLAPACK... no checking for MUMPS... yes checking for BLACS... no checking for HYPRE... no checking for Prometheus... no checking for SEMIC... yes checking for SPAI... no checking for SuperLU... no checking for SPOOLES... no checking for PaStiX... no checking for ml... no checking for UMFPACK... no checking for libm... done checking for MATH77... no checking for Fortran compilation... yes checking for Fortran library... done checking for MeteoIO... no checking for SNOWPACK... no checking for NeoPZ... no checking for Gmsh... no checking for BAMG capability compilation... yes checking for ice/ocean coupling capability compilation... yes checking for kml capability compilation... no checking for kriging capability compilation... yes checking for HydrologyTws capability compilation... yes checking for AdjointBalancethickness2 capability compilation... yes checking for AdjointBalancethickness capability compilation... yes checking for AdjointHoriz capability compilation... yes checking for Age capability compilation... yes checking for Balancethickness2 capability compilation... yes checking for Balancethickness capability compilation... yes checking for BalancethicknessSoft capability compilation... yes checking for Balancevelocity capability compilation... yes checking for DamageEvolution capability compilation... yes checking for Debris capability compilation... yes checking for DepthAverage capability compilation... yes checking for Enthalpy capability compilation... yes checking for Esa capability compilation... yes checking for Extrapolation capability compilation... yes checking for ExtrudeFromBase capability compilation... yes checking for ExtrudeFromTop capability compilation... yes checking for FreeSurfaceBase capability compilation... yes checking for FreeSurfaceTop capability compilation... yes checking for GLheightadvection capability compilation... yes checking for HydrologyDCEfficient capability compilation... yes checking for HydrologyDCInefficient capability compilation... yes checking for HydrologyGlaDS capability compilation... yes checking for HydrologyPism capability compilation... yes checking for HydrologyShakti capability compilation... yes checking for HydrologyShreve capability compilation... yes checking for HydrologyArmapw capability compilation... yes checking for L2ProjectionBase capability compilation... yes checking for L2ProjectionEPL capability compilation... yes checking for Levelset capability compilation... yes checking for Love capability compilation... yes checking for Masstransport capability compilation... yes checking for Melting capability compilation... yes checking for Oceantransport capability compilation... yes checking for Recovery capability compilation... yes checking for Sampling capability compilation... yes checking for Sealevelchange capability compilation... yes checking for Smb capability compilation... yes checking for Smooth capability compilation... yes checking for Stressbalance capability compilation... yes checking for StressbalanceSIA capability compilation... yes checking for StressbalanceVertical capability compilation... yes checking for Thermal capability compilation... yes checking for UzawaPressure capability compilation... yes checking for number of threads... 4 checking for 64-bit indices... 0 checking consistency between all external packages... done checking for C++ optimization flags... DEPRECATED checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/c/Makefile config.status: creating src/wrappers/Makefile config.status: creating src/wrappers/python/Makefile config.status: creating src/wrappers/matlab/Makefile config.status: creating src/wrappers/javascript/Makefile config.status: creating src/m/Makefile config.status: creating ./config.h config.status: executing depfiles commands config.status: executing libtool commands ====================================================== Compiling ISSM ====================================================== Making with 8 CPUs make all-recursive make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' Making all in src make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' Making all in c make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' CXX classes/libISSMCore_la-DependentObject.lo CXX classes/libISSMCore_la-Contours.lo CXX classes/libISSMCore_la-Vertices.lo CXX classes/libISSMCore_la-Nodes.lo CXX classes/libISSMCore_la-Numberedcostfunction.lo CXX classes/libISSMCore_la-Cfsurfacesquare.lo CXX classes/libISSMCore_la-Misfit.lo CXX classes/libISSMCore_la-Cfsurfacesquaretransient.lo CXX classes/libISSMCore_la-Cfdragcoeffabsgrad.lo CXX classes/libISSMCore_la-Cfdragcoeffabsgradtransient.lo CXX classes/libISSMCore_la-Cfrheologybbarabsgrad.lo CXX classes/libISSMCore_la-Cfrheologybbarabsgradtransient.lo CXX classes/libISSMCore_la-Cfsurfacelogvel.lo CXX classes/libISSMCore_la-Cflevelsetmisfit.lo CXX classes/libISSMCore_la-Regionaloutput.lo CXX classes/libISSMCore_la-Nodalvalue.lo CXX classes/libISSMCore_la-Node.lo CXX classes/libISSMCore_la-Vertex.lo CXX classes/libISSMCore_la-Hook.lo CXX classes/libISSMCore_la-Radar.lo CXX classes/libISSMCore_la-BarystaticContributions.lo CXX classes/Constraints/libISSMCore_la-Constraints.lo CXX classes/Constraints/libISSMCore_la-SpcStatic.lo CXX classes/Constraints/libISSMCore_la-SpcDynamic.lo CXX classes/Loads/libISSMCore_la-Channel.lo CXX classes/Loads/libISSMCore_la-Loads.lo CXX classes/Loads/libISSMCore_la-Penpair.lo CXX classes/Loads/libISSMCore_la-Pengrid.lo CXX classes/Loads/libISSMCore_la-Moulin.lo CXX classes/Loads/libISSMCore_la-Numericalflux.lo CXX classes/Loads/libISSMCore_la-Neumannflux.lo CXX classes/libISSMCore_la-Profiler.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateFaces.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateEdges.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateSingleNodeToElementConnectivity.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateNumberNodeToElementConnectivity.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateElementsVerticesAndMaterials.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateNodes.lo CXX main/libISSMCore_la-EnvironmentInit.lo CXX main/libISSMCore_la-EnvironmentFinalize.lo CXX classes/libISSMCore_la-RiftStruct.lo CXX cores/libISSMCore_la-transient_core.lo CXX cores/libISSMCore_la-steadystate_core.lo CXX cores/libISSMCore_la-masstransport_core.lo CXX cores/libISSMCore_la-oceantransport_core.lo CXX cores/libISSMCore_la-depthaverage_core.lo CXX cores/libISSMCore_la-extrudefrombase_core.lo CXX cores/libISSMCore_la-extrudefromtop_core.lo CXX cores/libISSMCore_la-thermal_core.lo CXX cores/libISSMCore_la-smb_core.lo CXX cores/libISSMCore_la-bmb_core.lo CXX cores/libISSMCore_la-debris_core.lo CXX solutionsequences/libISSMCore_la-solutionsequence_thermal_nonlinear.lo CXX shared/Numerics/libISSMCore_la-BrentSearch.lo CXX cores/libISSMCore_la-control_core.lo CXX cores/libISSMCore_la-controltao_core.lo CXX cores/libISSMCore_la-controlm1qn3_core.lo CXX cores/libISSMCore_la-controladm1qn3_core.lo CXX cores/libISSMCore_la-controlvalidation_core.lo CXX cores/libISSMCore_la-adjointstressbalance_core.lo CXX cores/libISSMCore_la-adjointbalancethickness_core.lo CXX cores/libISSMCore_la-adjointbalancethickness2_core.lo CXX cores/libISSMCore_la-AdjointCorePointerFromSolutionEnum.lo CXX solutionsequences/libISSMCore_la-solutionsequence_adjoint_linear.lo CXX cores/libISSMCore_la-hydrology_core.lo CXX solutionsequences/libISSMCore_la-solutionsequence_hydro_nonlinear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_shakti_nonlinear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_glads_nonlinear.lo CXX cores/libISSMCore_la-stressbalance_core.lo CXX solutionsequences/libISSMCore_la-solutionsequence_stokescoupling_nonlinear.lo CXX cores/libISSMCore_la-balancethickness_core.lo CXX cores/libISSMCore_la-balancethickness2_core.lo CXX cores/libISSMCore_la-balancevelocity_core.lo CXX cores/libISSMCore_la-dummy_core.lo CXX cores/libISSMCore_la-surfaceslope_core.lo CXX cores/libISSMCore_la-bedslope_core.lo CXX cores/libISSMCore_la-damage_core.lo CXX cores/libISSMCore_la-levelsetfunctionslope_core.lo CXX cores/libISSMCore_la-movingfront_core.lo CXX cores/libISSMCore_la-groundingline_core.lo CXX classes/Loads/libISSMCore_la-Riftfront.lo CXX modules/ConstraintsStatex/libISSMCore_la-RiftConstraintsState.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateOutputDefinitions.lo CXX analyses/libISSMCore_la-AdjointBalancethicknessAnalysis.lo CXX analyses/libISSMCore_la-AdjointBalancethickness2Analysis.lo CXX analyses/libISSMCore_la-AdjointHorizAnalysis.lo CXX analyses/libISSMCore_la-AgeAnalysis.lo CXX analyses/libISSMCore_la-BalancethicknessAnalysis.lo CXX analyses/libISSMCore_la-Balancethickness2Analysis.lo CXX analyses/libISSMCore_la-BalancethicknessSoftAnalysis.lo CXX analyses/libISSMCore_la-BalancevelocityAnalysis.lo CXX analyses/libISSMCore_la-L2ProjectionBaseAnalysis.lo CXX analyses/libISSMCore_la-DamageEvolutionAnalysis.lo CXX analyses/libISSMCore_la-DebrisAnalysis.lo CXX analyses/libISSMCore_la-StressbalanceAnalysis.lo CXX analyses/libISSMCore_la-UzawaPressureAnalysis.lo CXX analyses/libISSMCore_la-StressbalanceSIAAnalysis.lo CXX analyses/libISSMCore_la-StressbalanceVerticalAnalysis.lo CXX analyses/libISSMCore_la-EnthalpyAnalysis.lo CXX analyses/libISSMCore_la-GLheightadvectionAnalysis.lo CXX analyses/libISSMCore_la-HydrologyShreveAnalysis.lo CXX analyses/libISSMCore_la-HydrologyTwsAnalysis.lo CXX analyses/libISSMCore_la-HydrologyShaktiAnalysis.lo CXX analyses/libISSMCore_la-HydrologyPismAnalysis.lo CXX analyses/libISSMCore_la-HydrologyGlaDSAnalysis.lo CXX analyses/libISSMCore_la-HydrologyDCInefficientAnalysis.lo CXX analyses/libISSMCore_la-HydrologyDCEfficientAnalysis.lo CXX analyses/libISSMCore_la-HydrologyArmapwAnalysis.lo CXX analyses/libISSMCore_la-L2ProjectionEPLAnalysis.lo CXX analyses/libISSMCore_la-MeltingAnalysis.lo CXX analyses/libISSMCore_la-MasstransportAnalysis.lo CXX analyses/libISSMCore_la-OceantransportAnalysis.lo CXX analyses/libISSMCore_la-SmbAnalysis.lo CXX analyses/libISSMCore_la-FreeSurfaceBaseAnalysis.lo CXX analyses/libISSMCore_la-FreeSurfaceTopAnalysis.lo CXX analyses/libISSMCore_la-ExtrudeFromBaseAnalysis.lo CXX analyses/libISSMCore_la-ExtrudeFromTopAnalysis.lo CXX analyses/libISSMCore_la-DepthAverageAnalysis.lo CXX analyses/libISSMCore_la-ThermalAnalysis.lo CXX analyses/libISSMCore_la-SmoothAnalysis.lo CXX analyses/libISSMCore_la-LevelsetAnalysis.lo CXX analyses/libISSMCore_la-ExtrapolationAnalysis.lo CXX cores/libISSMCore_la-love_core.lo CXX analyses/libISSMCore_la-LoveAnalysis.lo CXX cores/libISSMCore_la-esa_core.lo CXX analyses/libISSMCore_la-EsaAnalysis.lo CXX cores/libISSMCore_la-sampling_core.lo CXX analyses/libISSMCore_la-SamplingAnalysis.lo CXX cores/libISSMCore_la-sealevelchange_core.lo CXX analyses/libISSMCore_la-SealevelchangeAnalysis.lo CXX classes/libISSMCore_la-GrdLoads.lo CXX classes/libISSMCore_la-SealevelGeometry.lo FC modules/SurfaceMassBalancex/run_semic.lo FC modules/SurfaceMassBalancex/run_semic_transient.lo CXX shared/String/ApiPrintf.lo CXX modules/Krigingx/libISSMModules_la-Krigingx.lo CXX modules/Krigingx/libISSMModules_la-pKrigingx.lo CXX main/issm_slc-issm_slc.o CXX main/issm_ocean-issm_ocean.o CXX main/kriging-kriging.o CXX main/issm-issm.o CXX bamg/libISSMCore_la-BamgGeom.lo CXX bamg/libISSMCore_la-BamgMesh.lo CXX bamg/libISSMCore_la-BamgOpts.lo CXX bamg/libISSMCore_la-CrackedEdge.lo CXX bamg/libISSMCore_la-Curve.lo CXX bamg/libISSMCore_la-Edge.lo CXX bamg/libISSMCore_la-GeomEdge.lo CXX bamg/libISSMCore_la-GeomSubDomain.lo CXX bamg/libISSMCore_la-GeomVertex.lo CXX bamg/libISSMCore_la-Geometry.lo CXX bamg/libISSMCore_la-ListofIntersectionTriangles.lo CXX bamg/libISSMCore_la-EigenMetric.lo CXX bamg/libISSMCore_la-Metric.lo CXX bamg/libISSMCore_la-BamgQuadtree.lo CXX bamg/libISSMCore_la-SetOfE4.lo CXX bamg/libISSMCore_la-SubDomain.lo CXX bamg/libISSMCore_la-AdjacentTriangle.lo CXX bamg/libISSMCore_la-Triangle.lo CXX bamg/libISSMCore_la-BamgVertex.lo CXX bamg/libISSMCore_la-VertexOnEdge.lo CXX bamg/libISSMCore_la-VertexOnGeom.lo CXX bamg/libISSMCore_la-VertexOnVertex.lo CXX bamg/libISSMCore_la-Mesh.lo CXX shared/Bamg/libISSMCore_la-BigPrimeNumber.lo CXX modules/Bamgx/libISSMCore_la-Bamgx.lo CXX modules/BamgConvertMeshx/libISSMCore_la-BamgConvertMeshx.lo CXX modules/BamgTriangulatex/libISSMCore_la-BamgTriangulatex.lo CXX classes/libISSMCore_la-AmrBamg.lo CXX datastructures/libISSMCore_la-DataSet.lo CXX classes/gauss/libISSMCore_la-GaussSeg.lo CXX classes/gauss/libISSMCore_la-GaussTria.lo CXX classes/gauss/libISSMCore_la-GaussTetra.lo CXX classes/gauss/libISSMCore_la-GaussPenta.lo CXX classes/libISSMCore_la-IoModel.lo CXX classes/libISSMCore_la-FemModel.lo CXX classes/Loads/libISSMCore_la-Friction.lo CXX classes/Constraints/libISSMCore_la-SpcTransient.lo CXX classes/ExternalResults/libISSMCore_la-Results.lo CXX classes/Elements/libISSMCore_la-Element.lo CXX classes/Elements/libISSMCore_la-Elements.lo CXX classes/Elements/libISSMCore_la-ElementHook.lo CXX classes/Elements/libISSMCore_la-Seg.lo CXX classes/Elements/libISSMCore_la-SegRef.lo CXX classes/Elements/libISSMCore_la-Tria.lo CXX classes/Elements/libISSMCore_la-TriaRef.lo CXX classes/Elements/libISSMCore_la-Tetra.lo CXX classes/Elements/libISSMCore_la-TetraRef.lo CXX classes/Elements/libISSMCore_la-Penta.lo CXX classes/Elements/libISSMCore_la-PentaRef.lo CXX classes/Materials/libISSMCore_la-Materials.lo CXX classes/Materials/libISSMCore_la-Matice.lo CXX classes/Materials/libISSMCore_la-Matlitho.lo CXX classes/Materials/libISSMCore_la-Matestar.lo CXX classes/matrix/libISSMCore_la-ElementMatrix.lo CXX classes/matrix/libISSMCore_la-ElementVector.lo CXX classes/Params/libISSMCore_la-Parameters.lo CXX classes/Params/libISSMCore_la-BoolParam.lo CXX classes/Params/libISSMCore_la-ControlParam.lo CXX classes/Params/libISSMCore_la-IntParam.lo CXX classes/Params/libISSMCore_la-IntVecParam.lo CXX classes/Params/libISSMCore_la-IntMatParam.lo CXX classes/Params/libISSMCore_la-DoubleParam.lo CXX classes/Params/libISSMCore_la-FileParam.lo CXX classes/Params/libISSMCore_la-StringArrayParam.lo CXX classes/Params/libISSMCore_la-DoubleMatParam.lo CXX classes/Params/libISSMCore_la-DoubleTransientMatParam.lo CXX classes/Params/libISSMCore_la-DoubleMatArrayParam.lo CXX classes/Params/libISSMCore_la-DoubleVecParam.lo CXX classes/Params/libISSMCore_la-StringParam.lo CXX classes/Params/libISSMCore_la-MatrixParam.lo CXX classes/Params/libISSMCore_la-VectorParam.lo CXX classes/Params/libISSMCore_la-TransientParam.lo CXX classes/Params/libISSMCore_la-TransientArrayParam.lo CXX classes/Params/libISSMCore_la-DataSetParam.lo CXX shared/Matrix/libISSMCore_la-MatrixUtils.lo CXX shared/io/Disk/libISSMCore_la-pfopen.lo CXX shared/io/Disk/libISSMCore_la-pfclose.lo CXX shared/io/Disk/libISSMCore_la-WriteLockFile.lo CXX shared/io/Print/libISSMCore_la-PrintfFunction.lo CXX shared/io/Comm/libISSMCore_la-IssmComm.lo CXX shared/io/Marshalling/libISSMCore_la-IoCodeConversions.lo CXX shared/io/Marshalling/libISSMCore_la-Marshalling.lo CXX shared/LatLong/libISSMCore_la-Ll2xyx.lo CXX shared/LatLong/libISSMCore_la-Xy2llx.lo CXX shared/FSanalyticals/libISSMCore_la-fsanalyticals.lo CXX shared/Enum/libISSMCore_la-EnumToStringx.lo CXX shared/Enum/libISSMCore_la-StringToEnumx.lo CXX shared/Numerics/libISSMCore_la-Verbosity.lo CXX shared/Numerics/libISSMCore_la-GaussPoints.lo CXX shared/Numerics/libISSMCore_la-cross.lo CXX shared/Numerics/libISSMCore_la-cubic.lo CXX shared/Numerics/libISSMCore_la-NewtonSolveDnorm.lo CXX shared/Numerics/libISSMCore_la-ODE1.lo CXX shared/Numerics/libISSMCore_la-extrema.lo CXX shared/Numerics/libISSMCore_la-legendre.lo CXX shared/Numerics/libISSMCore_la-XZvectorsToCoordinateSystem.lo CXX shared/Exceptions/libISSMCore_la-Exceptions.lo CXX shared/Sorting/libISSMCore_la-binary_search.lo CXX shared/Elements/libISSMCore_la-Cuffey.lo CXX shared/Elements/libISSMCore_la-BuddJacka.lo CXX shared/Elements/libISSMCore_la-CuffeyTemperate.lo CXX shared/Elements/libISSMCore_la-StressIntensityIntegralWeight.lo CXX shared/Elements/libISSMCore_la-Paterson.lo CXX shared/Elements/libISSMCore_la-Arrhenius.lo CXX shared/Elements/libISSMCore_la-NyeCO2.lo CXX shared/Elements/libISSMCore_la-NyeH2O.lo CXX shared/Elements/libISSMCore_la-LliboutryDuval.lo CXX shared/Elements/libISSMCore_la-PrintArrays.lo CXX shared/Elements/libISSMCore_la-PddSurfaceMassBalance.lo CXX shared/Elements/libISSMCore_la-PddSurfaceMassBalanceSicopolis.lo CXX shared/Elements/libISSMCore_la-ComputeDelta18oTemperaturePrecipitation.lo CXX shared/Elements/libISSMCore_la-ComputeMungsmTemperaturePrecipitation.lo CXX shared/Elements/libISSMCore_la-ComputeD18OTemperaturePrecipitationFromPD.lo CXX shared/Elements/libISSMCore_la-DrainageFunctionWaterfraction.lo CXX shared/Elements/libISSMCore_la-EstarComponents.lo CXX shared/Random/libISSMCore_la-random.lo CXX shared/Random/libISSMCore_la-randomgenerator.lo CXX shared/String/libISSMCore_la-DescriptorIndex.lo CXX toolkits/issm/libISSMCore_la-IssmToolkitUtils.lo CXX toolkits/issm/libISSMCore_la-IssmSolver.lo CXX toolkits/mpi/libISSMCore_la-issmmpi.lo CXX toolkits/mpi/commops/libISSMCore_la-DetermineLocalSize.lo CXX toolkits/mpi/commops/libISSMCore_la-DetermineGlobalSize.lo CXX toolkits/mpi/commops/libISSMCore_la-DetermineRowRankFromLocalSize.lo CXX toolkits/mpi/commops/libISSMCore_la-GetOwnershipBoundariesFromRange.lo CXX toolkits/libISSMCore_la-ToolkitOptions.lo CXX modules/MmeToInputFromIdx/libISSMCore_la-MmeToInputFromIdx.lo CXX modules/ModelProcessorx/libISSMCore_la-ModelProcessorx.lo CXX modules/ModelProcessorx/libISSMCore_la-ElementsAndVerticesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-NodesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-EdgesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-FacesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateParameters.lo CXX modules/ModelProcessorx/Autodiff/libISSMCore_la-CreateParametersAutodiff.lo CXX modules/ParseToolkitsOptionsx/libISSMCore_la-ParseToolkitsOptionsx.lo CXX modules/NodesDofx/libISSMCore_la-NodesDofx.lo CXX modules/NodalValuex/libISSMCore_la-NodalValuex.lo CXX modules/VertexCoordinatesx/libISSMCore_la-VertexCoordinatesx.lo CXX modules/ElementCoordinatesx/libISSMCore_la-ElementCoordinatesx.lo CXX modules/OutputResultsx/libISSMCore_la-OutputResultsx.lo CXX modules/InputDepthAverageAtBasex/libISSMCore_la-InputDepthAverageAtBasex.lo CXX modules/InputDuplicatex/libISSMCore_la-InputDuplicatex.lo CXX modules/InputExtrudex/libISSMCore_la-InputExtrudex.lo CXX modules/SurfaceAreax/libISSMCore_la-SurfaceAreax.lo CXX modules/AllocateSystemMatricesx/libISSMCore_la-AllocateSystemMatricesx.lo CXX modules/CreateJacobianMatrixx/libISSMCore_la-CreateJacobianMatrixx.lo CXX modules/SystemMatricesx/libISSMCore_la-SystemMatricesx.lo CXX modules/CreateNodalConstraintsx/libISSMCore_la-CreateNodalConstraintsx.lo CXX modules/UpdateDynamicConstraintsx/libISSMCore_la-UpdateDynamicConstraintsx.lo CXX modules/IoModelToConstraintsx/libISSMCore_la-IoModelToConstraintsx.lo CXX modules/SetActiveNodesLSMx/libISSMCore_la-SetActiveNodesLSMx.lo CXX modules/InputUpdateFromConstantx/libISSMCore_la-InputUpdateFromConstantx.lo CXX modules/InputUpdateFromSolutionx/libISSMCore_la-InputUpdateFromSolutionx.lo CXX modules/GeothermalFluxx/libISSMCore_la-GeothermalFluxx.lo CXX modules/GetSolutionFromInputsx/libISSMCore_la-GetSolutionFromInputsx.lo CXX modules/GetVectorFromInputsx/libISSMCore_la-GetVectorFromInputsx.lo CXX modules/InputUpdateFromVectorx/libISSMCore_la-InputUpdateFromVectorx.lo CXX modules/FloatingiceMeltingRatex/libISSMCore_la-FloatingiceMeltingRatex.lo CXX modules/FloatingiceMeltingRatePicox/libISSMCore_la-FloatingiceMeltingRatePicox.lo CXX modules/FrontalForcingsx/libISSMCore_la-FrontalForcingsx.lo CXX modules/ConfigureObjectsx/libISSMCore_la-ConfigureObjectsx.lo CXX modules/SpcNodesx/libISSMCore_la-SpcNodesx.lo CXX modules/SurfaceMassBalancex/libISSMCore_la-SurfaceMassBalancex.lo CXX modules/SurfaceMassBalancex/libISSMCore_la-Gembx.lo CXX modules/Reducevectorgtofx/libISSMCore_la-Reducevectorgtofx.lo CXX modules/Reduceloadx/libISSMCore_la-Reduceloadx.lo CXX modules/ConstraintsStatex/libISSMCore_la-ConstraintsStatex.lo CXX modules/ResetConstraintsx/libISSMCore_la-ResetConstraintsx.lo CXX modules/ResetFSBasalBoundaryConditionx/libISSMCore_la-ResetFSBasalBoundaryConditionx.lo CXX modules/Solverx/libISSMCore_la-Solverx.lo CXX modules/StochasticForcingx/libISSMCore_la-StochasticForcingx.lo CXX modules/Mergesolutionfromftogx/libISSMCore_la-Mergesolutionfromftogx.lo CXX cores/libISSMCore_la-ProcessArguments.lo CXX cores/libISSMCore_la-ResetBoundaryConditions.lo CXX cores/libISSMCore_la-WrapperCorePointerFromSolutionEnum.lo CXX cores/libISSMCore_la-WrapperPreCorePointerFromSolutionEnum.lo CXX cores/libISSMCore_la-CorePointerFromSolutionEnum.lo CXX cores/libISSMCore_la-ad_core.lo CXX analyses/libISSMCore_la-EnumToAnalysis.lo CXX solutionsequences/libISSMCore_la-solutionsequence_la.lo CXX solutionsequences/libISSMCore_la-solutionsequence_la_theta.lo CXX solutionsequences/libISSMCore_la-solutionsequence_linear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_nonlinear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_newton.lo CXX solutionsequences/libISSMCore_la-solutionsequence_fct.lo CXX solutionsequences/libISSMCore_la-solutionsequence_schurcg.lo CXX solutionsequences/libISSMCore_la-solutionsequence_sampling.lo CXX solutionsequences/libISSMCore_la-convergence.lo CXX classes/Options/libISSMCore_la-Options.lo CXX classes/Options/libISSMCore_la-OptionUtilities.lo CXX modules/ModelProcessorx/Transient/libISSMCore_la-UpdateElementsTransient.lo CXX modules/ModelProcessorx/Transient/libISSMCore_la-UpdateParametersTransient.lo CXX modules/ControlInputSetGradientx/libISSMCore_la-ControlInputSetGradientx.lo CXX modules/GetVectorFromControlInputsx/libISSMCore_la-GetVectorFromControlInputsx.lo CXX modules/SetControlInputsFromVectorx/libISSMCore_la-SetControlInputsFromVectorx.lo CXX modules/ModelProcessorx/Control/libISSMCore_la-CreateParametersControl.lo CXX modules/ModelProcessorx/Control/libISSMCore_la-UpdateElementsAndMaterialsControl.lo CXX modules/SurfaceAbsVelMisfitx/libISSMCore_la-SurfaceAbsVelMisfitx.lo CXX modules/SurfaceRelVelMisfitx/libISSMCore_la-SurfaceRelVelMisfitx.lo CXX modules/SurfaceLogVelMisfitx/libISSMCore_la-SurfaceLogVelMisfitx.lo CXX modules/SurfaceLogVxVyMisfitx/libISSMCore_la-SurfaceLogVxVyMisfitx.lo CXX modules/SurfaceAverageVelMisfitx/libISSMCore_la-SurfaceAverageVelMisfitx.lo CXX modules/ThicknessAbsMisfitx/libISSMCore_la-ThicknessAbsMisfitx.lo CXX modules/Gradjx/libISSMCore_la-Gradjx.lo CXX modules/DragCoefficientAbsGradientx/libISSMCore_la-DragCoefficientAbsGradientx.lo CXX modules/ThicknessAlongGradientx/libISSMCore_la-ThicknessAlongGradientx.lo CXX modules/ThicknessAcrossGradientx/libISSMCore_la-ThicknessAcrossGradientx.lo CXX modules/RheologyBbarAbsGradientx/libISSMCore_la-RheologyBbarAbsGradientx.lo CXX modules/RheologyBAbsGradientx/libISSMCore_la-RheologyBAbsGradientx.lo CXX modules/GroundinglineMigrationx/libISSMCore_la-GroundinglineMigrationx.lo CXX modules/OutputDefinitionsResponsex/libISSMCore_la-OutputDefinitionsResponsex.lo CXX modules/InterpFromMeshToMesh2dx/libISSMCore_la-InterpFromMeshToMesh2dx.lo CXX classes/Inputs/libISSMCore_la-Inputs.lo CXX classes/Inputs/libISSMCore_la-BoolInput.lo CXX classes/Inputs/libISSMCore_la-DoubleInput.lo CXX classes/Inputs/libISSMCore_la-IntInput.lo CXX classes/Inputs/libISSMCore_la-ElementInput.lo CXX classes/Inputs/libISSMCore_la-SegInput.lo CXX classes/Inputs/libISSMCore_la-TriaInput.lo CXX classes/Inputs/libISSMCore_la-PentaInput.lo CXX classes/Inputs/libISSMCore_la-DatasetInput.lo CXX classes/Inputs/libISSMCore_la-ControlInput.lo CXX classes/Inputs/libISSMCore_la-TransientInput.lo CXX classes/Inputs/libISSMCore_la-ArrayInput.lo CXX classes/Inputs/libISSMCore_la-IntArrayInput.lo CXX toolkits/petsc/patches/libISSMCore_la-VecToMPISerial.lo CXX toolkits/petsc/patches/libISSMCore_la-MatToMPISerial.lo CXX toolkits/petsc/patches/libISSMCore_la-NewVec.lo CXX toolkits/petsc/patches/libISSMCore_la-PetscOptionsDetermineSolverType.lo CXX toolkits/petsc/patches/libISSMCore_la-NewMat.lo CXX toolkits/petsc/patches/libISSMCore_la-VecFree.lo CXX toolkits/petsc/patches/libISSMCore_la-KSPFree.lo CXX toolkits/petsc/patches/libISSMCore_la-MatFree.lo CXX toolkits/petsc/patches/libISSMCore_la-MatMultPatch.lo CXX toolkits/petsc/patches/libISSMCore_la-ISSMToPetscMatrixType.lo CXX toolkits/petsc/patches/libISSMCore_la-ISSMToPetscInsertMode.lo CXX toolkits/petsc/patches/libISSMCore_la-ISSMToPetscNormMode.lo CXX toolkits/petsc/objects/libISSMCore_la-PetscMat.lo CXX toolkits/petsc/objects/libISSMCore_la-PetscVec.lo CXX toolkits/petsc/objects/libISSMCore_la-PetscSolver.lo CXX toolkits/mumps/libISSMCore_la-MumpsSolve.lo CXX modules/Damagex/libISSMCore_la-Damagex.lo CXX modules/Calvingx/libISSMCore_la-Calvingx.lo CXX modules/KillIcebergsx/libISSMCore_la-KillIcebergsx.lo CXX modules/OceanExchangeDatax/libISSMCore_la-OceanExchangeDatax.lo CXX modules/GiaDeflectionCorex/libISSMCore_la-GiaDeflectionCorex.lo F77 modules/GiaDeflectionCorex/libISSMCore_la-distme.lo F77 modules/GiaDeflectionCorex/libISSMCore_la-freed.lo F77 modules/GiaDeflectionCorex/libISSMCore_la-ojrule.lo F77 modules/GiaDeflectionCorex/libISSMCore_la-pwise.lo F77 modules/GiaDeflectionCorex/libISSMCore_la-qwise.lo F77 modules/GiaDeflectionCorex/libISSMCore_la-stot.lo F77 modules/GiaDeflectionCorex/libISSMCore_la-what0.lo CXX modules/MeshPartitionx/libISSMCore_la-MeshPartitionx.lo CXX toolkits/metis/patches/libISSMCore_la-METIS_PartMeshNodalPatch.lo CXX classes/kriging/libISSMCore_la-Observations.lo CXX classes/kriging/libISSMCore_la-GaussianVariogram.lo CXX classes/kriging/libISSMCore_la-ExponentialVariogram.lo CXX classes/kriging/libISSMCore_la-SphericalVariogram.lo CXX classes/kriging/libISSMCore_la-PowerVariogram.lo CXX classes/kriging/libISSMCore_la-Quadtree.lo CXX classes/kriging/libISSMCore_la-Covertree.lo CXX classes/kriging/libISSMCore_la-Observation.lo CXX modules/Krigingx/libISSMCore_la-pKrigingx.lo CXXLD libISSMOverload.la CXX shared/Threads/libISSMModules_la-LaunchThread.lo CXX shared/Threads/libISSMModules_la-PartitionRange.lo CXX shared/Exp/libISSMModules_la-exp.lo CXX shared/Triangle/libISSMModules_la-AssociateSegmentToElement.lo CXX shared/Triangle/libISSMModules_la-GridInsideHole.lo CXX shared/Triangle/libISSMModules_la-OrderSegments.lo CXX shared/Triangle/libISSMModules_la-SplitMeshForRifts.lo CXX shared/Triangle/libISSMModules_la-TriangleUtils.lo CXX modules/Trianglex/libISSMModules_la-Trianglex.lo CXX modules/ProcessRiftsx/libISSMModules_la-ProcessRiftsx.lo CXX modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo CXX modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo CXX modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo CXX modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo CXX modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo CXX modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo CXX modules/InterpFromMeshToGridx/libISSMModules_la-InterpFromMeshToGridx.lo CXX modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo CXX modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo CXX modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo CXX modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo CXX modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo CXX modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo CXX modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo CXX modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo CXX modules/NodeConnectivityx/libISSMModules_la-NodeConnectivityx.lo CXX modules/ElementConnectivityx/libISSMModules_la-ElementConnectivityx.lo CXX modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo CXXLD libISSMCore.la CXXLD libISSMModules.la CXXLD issm.exe CXXLD issm_slc.exe CXXLD issm_ocean.exe CXXLD kriging.exe make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' Making all in m make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' Making all in wrappers make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' Making all in matlab make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' CXX io/libISSMMatlab_la-CheckNumMatlabArguments.lo CXX io/libISSMMatlab_la-FetchMatlabData.lo CXX io/libISSMMatlab_la-WriteMatlabData.lo CXX io/libISSMApi_la-ApiPrintf.lo CXX ../BamgConvertMesh/BamgConvertMesh_matlab_la-BamgConvertMesh.lo CXX ../BamgMesher/BamgMesher_matlab_la-BamgMesher.lo CXX ../BamgTriangulate/BamgTriangulate_matlab_la-BamgTriangulate.lo CXX ../ContourToMesh/ContourToMesh_matlab_la-ContourToMesh.lo CXX ../ContourToNodes/ContourToNodes_matlab_la-ContourToNodes.lo CXX ../DistanceToMaskBoundary/DistanceToMaskBoundary_matlab_la-DistanceToMaskBoundary.lo CXX ../ElementConnectivity/ElementConnectivity_matlab_la-ElementConnectivity.lo CXX ../ExpSimplify/ExpSimplify_matlab_la-ExpSimplify.lo CXX ../ExpToLevelSet/ExpToLevelSet_matlab_la-ExpToLevelSet.lo CXX ../InterpFromGridToMesh/InterpFromGridToMesh_matlab_la-InterpFromGridToMesh.lo CXX ../InterpFromMesh2d/InterpFromMesh2d_matlab_la-InterpFromMesh2d.lo CXX ../InterpFromMeshToGrid/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.lo CXX ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.lo CXX ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.lo CXX ../IssmConfig/IssmConfig_matlab_la-IssmConfig.lo CXX ../M1qn3/M1qn3_matlab_la-M1qn3.lo CXX ../MeshPartition/MeshPartition_matlab_la-MeshPartition.lo CXX ../MeshProfileIntersection/MeshProfileIntersection_matlab_la-MeshProfileIntersection.lo CXX ../NodeConnectivity/NodeConnectivity_matlab_la-NodeConnectivity.lo CXX ../PointCloudFindNeighbors/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.lo CXX ../ProcessRifts/ProcessRifts_matlab_la-ProcessRifts.lo CXX ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.lo CXX ../Scotch/Scotch_matlab_la-Scotch.lo CXX ../Triangle/Triangle_matlab_la-Triangle.lo CXX ../Kriging/Kriging_matlab_la-Kriging.lo CXXLD libISSMMatlab.la CXXLD libISSMApi.la CXXLD BamgConvertMesh_matlab.la CXXLD BamgMesher_matlab.la CXXLD BamgTriangulate_matlab.la CXXLD ContourToMesh_matlab.la CXXLD ContourToNodes_matlab.la CXXLD DistanceToMaskBoundary_matlab.la CXXLD ElementConnectivity_matlab.la CXXLD ExpSimplify_matlab.la CXXLD ExpToLevelSet_matlab.la CXXLD InterpFromGridToMesh_matlab.la CXXLD InterpFromMesh2d_matlab.la CXXLD InterpFromMeshToGrid_matlab.la CXXLD InterpFromMeshToMesh2d_matlab.la CXXLD InterpFromMeshToMesh3d_matlab.la CXXLD IssmConfig_matlab.la CXXLD M1qn3_matlab.la CXXLD MeshPartition_matlab.la CXXLD MeshProfileIntersection_matlab.la CXXLD NodeConnectivity_matlab.la CXXLD PointCloudFindNeighbors_matlab.la CXXLD ProcessRifts_matlab.la CXXLD PropagateFlagsFromConnectivity_matlab.la CXXLD Scotch_matlab.la CXXLD Triangle_matlab.la CXXLD Kriging_matlab.la make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' Making install in src make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' Making install in c make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' CXXLD issm.exe CXXLD issm_slc.exe CXXLD issm_ocean.exe CXXLD kriging.exe make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' CXXLD issm.exe CXXLD issm_slc.exe CXXLD issm_ocean.exe CXXLD kriging.exe /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libISSMCore.la libISSMOverload.la libISSMModules.la '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib' libtool: install: /usr/bin/install -c .libs/libISSMCore.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so libtool: install: /usr/bin/install -c .libs/libISSMCore.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.la libtool: install: /usr/bin/install -c .libs/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so libtool: install: /usr/bin/install -c .libs/libISSMOverload.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.la libtool: warning: relinking 'libISSMModules.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -g -O2 -g -O2 -avoid-version -o libISSMModules.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ./shared/Threads/libISSMModules_la-LaunchThread.lo ./shared/Threads/libISSMModules_la-PartitionRange.lo ./shared/Exp/libISSMModules_la-exp.lo ./shared/Triangle/libISSMModules_la-AssociateSegmentToElement.lo ./shared/Triangle/libISSMModules_la-GridInsideHole.lo ./shared/Triangle/libISSMModules_la-OrderSegments.lo ./shared/Triangle/libISSMModules_la-SplitMeshForRifts.lo ./shared/Triangle/libISSMModules_la-TriangleUtils.lo ./modules/Trianglex/libISSMModules_la-Trianglex.lo ./modules/ProcessRiftsx/libISSMModules_la-ProcessRiftsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo ./modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo ./modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo ./modules/InterpFromMeshToGridx/libISSMModules_la-InterpFromMeshToGridx.lo ./modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo ./modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo ./modules/NodeConnectivityx/libISSMModules_la-NodeConnectivityx.lo ./modules/ElementConnectivityx/libISSMModules_la-ElementConnectivityx.lo ./modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo ./modules/Krigingx/libISSMModules_la-Krigingx.lo ./modules/Krigingx/libISSMModules_la-pKrigingx.lo ./libISSMCore.la -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/triangle/install/lib -ltriangle -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lflapack -lfblas ) libtool: install: /usr/bin/install -c .libs/libISSMModules.soT /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so libtool: install: /usr/bin/install -c .libs/libISSMModules.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.la libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/scripts:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/dyson/:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ---------------------------------------------------------------------- Libraries have been installed in: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c issm.exe issm_slc.exe issm_ocean.exe kriging.exe '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin' libtool: install: /usr/bin/install -c .libs/issm.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm.exe libtool: install: /usr/bin/install -c .libs/issm_slc.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm_slc.exe libtool: install: /usr/bin/install -c .libs/issm_ocean.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm_ocean.exe libtool: install: /usr/bin/install -c .libs/kriging.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/kriging.exe make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c' Making install in m make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m' Making install in wrappers make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' Making install in matlab make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib' /bin/bash ../../../libtool --mode=install /usr/bin/install -c libISSMMatlab.la libISSMApi.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la M1qn3_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la Kriging_matlab.la '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib' libtool: warning: relinking 'libISSMMatlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -avoid-version -o libISSMMatlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ./io/libISSMMatlab_la-CheckNumMatlabArguments.lo ./io/libISSMMatlab_la-FetchMatlabData.lo ./io/libISSMMatlab_la-WriteMatlabData.lo ./../../c/libISSMCore.la ./../../c/libISSMModules.la -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lpetsc -ldl -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -ldmumps -lcmumps -lmumps_common -lpord -lzmumps -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lscalapack -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lflapack -lfblas -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lparmetis -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lmetis -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/libISSMMatlab.soT /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so libtool: install: /usr/bin/install -c .libs/libISSMMatlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.la libtool: install: /usr/bin/install -c .libs/libISSMApi.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.so libtool: install: /usr/bin/install -c .libs/libISSMApi.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi.la libtool: warning: relinking 'BamgConvertMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgConvertMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgConvertMesh/BamgConvertMesh_matlab_la-BamgConvertMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.la libtool: warning: relinking 'BamgMesher_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgMesher_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgMesher/BamgMesher_matlab_la-BamgMesher.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.la libtool: warning: relinking 'BamgTriangulate_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgTriangulate_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgTriangulate/BamgTriangulate_matlab_la-BamgTriangulate.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.la libtool: warning: relinking 'ContourToMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ContourToMesh/ContourToMesh_matlab_la-ContourToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.la libtool: warning: relinking 'ContourToNodes_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToNodes_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ContourToNodes/ContourToNodes_matlab_la-ContourToNodes.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.la libtool: warning: relinking 'DistanceToMaskBoundary_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o DistanceToMaskBoundary_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../DistanceToMaskBoundary/DistanceToMaskBoundary_matlab_la-DistanceToMaskBoundary.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.la libtool: warning: relinking 'ElementConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ElementConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ElementConnectivity/ElementConnectivity_matlab_la-ElementConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.la libtool: warning: relinking 'ExpSimplify_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpSimplify_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ExpSimplify/ExpSimplify_matlab_la-ExpSimplify.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.la libtool: warning: relinking 'ExpToLevelSet_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpToLevelSet_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ExpToLevelSet/ExpToLevelSet_matlab_la-ExpToLevelSet.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.la libtool: warning: relinking 'InterpFromGridToMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromGridToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromGridToMesh/InterpFromGridToMesh_matlab_la-InterpFromGridToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.la libtool: warning: relinking 'InterpFromMesh2d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMesh2d/InterpFromMesh2d_matlab_la-InterpFromMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.la libtool: warning: relinking 'InterpFromMeshToGrid_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToGrid_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToGrid/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.la libtool: warning: relinking 'InterpFromMeshToMesh2d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.la libtool: warning: relinking 'InterpFromMeshToMesh3d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh3d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.la libtool: warning: relinking 'IssmConfig_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o IssmConfig_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../IssmConfig/IssmConfig_matlab_la-IssmConfig.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.la libtool: warning: relinking 'M1qn3_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o M1qn3_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../M1qn3/M1qn3_matlab_la-M1qn3.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/M1qn3_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/M1qn3_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/M1qn3_matlab.la libtool: warning: relinking 'MeshPartition_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshPartition_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../MeshPartition/MeshPartition_matlab_la-MeshPartition.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.la libtool: warning: relinking 'MeshProfileIntersection_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshProfileIntersection_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../MeshProfileIntersection/MeshProfileIntersection_matlab_la-MeshProfileIntersection.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.la libtool: warning: relinking 'NodeConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o NodeConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../NodeConnectivity/NodeConnectivity_matlab_la-NodeConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.la libtool: warning: relinking 'PointCloudFindNeighbors_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PointCloudFindNeighbors_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../PointCloudFindNeighbors/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.la libtool: warning: relinking 'ProcessRifts_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ProcessRifts_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ProcessRifts/ProcessRifts_matlab_la-ProcessRifts.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.la libtool: warning: relinking 'PropagateFlagsFromConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PropagateFlagsFromConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.la libtool: warning: relinking 'Scotch_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Scotch_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Scotch/Scotch_matlab_la-Scotch.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/Scotch_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/Scotch_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.la libtool: warning: relinking 'Triangle_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Triangle_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Triangle/Triangle_matlab_la-Triangle.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/triangle/install/lib -ltriangle ) libtool: install: /usr/bin/install -c .libs/Triangle_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/Triangle_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.la libtool: warning: relinking 'Kriging_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Kriging_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Kriging/Kriging_matlab_la-Kriging.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/Kriging_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/Kriging_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.la libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/scripts:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/dyson/:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ---------------------------------------------------------------------- Libraries have been installed in: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src' make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean' ./jenkins/jenkins.sh: line 365: 1939518 Segmentation fault $MATLAB_PATH/bin/matlab -nodisplay -nosplash -r "addpath ${ISSM_DIR}/src/m/dev; devpath; addpath ${ISSM_DIR}/nightlylog; matlab_run$i" &> ${ISSM_DIR}/nightlylog/matlab_log$i.log +++ Removing old junit reports from: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/nightlylog/results +++ Running case: MATLAB-4001 +++ working dir: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/nightlylog [41;37m step #1: Parameters [0m saving data in: Models/IceOcean.Parameters [41;37m step #2: Bathymetry [0m saving data in: Models/IceOcean.Bathymetry [41;37m step #3: IceSheetGeometry [0m saving data in: Models/IceOcean.IceSheetGeometry [41;37m step #4: GetMITgcm [0m --2024-09-12 12:50:31-- https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz Resolving github.com (github.com)... 140.82.116.3 Connecting to github.com (github.com)|140.82.116.3|:443... connected. HTTP request sent, awaiting response... 302 Found Location: https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i [following] --2024-09-12 12:50:31-- https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i Resolving codeload.github.com (codeload.github.com)... 140.82.116.10 Connecting to codeload.github.com (codeload.github.com)|140.82.116.10|:443... connected. 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MITgcm-checkpoint68i/model/src/convective_adjustment_ini.F MITgcm-checkpoint68i/model/src/convective_weights.F MITgcm-checkpoint68i/model/src/convectively_mixtracer.F MITgcm-checkpoint68i/model/src/correction_step.F MITgcm-checkpoint68i/model/src/cycle_ab_tracer.F MITgcm-checkpoint68i/model/src/cycle_tracer.F MITgcm-checkpoint68i/model/src/diags_oceanic_surf_flux.F MITgcm-checkpoint68i/model/src/diags_phi_hyd.F MITgcm-checkpoint68i/model/src/diags_phi_rlow.F MITgcm-checkpoint68i/model/src/diags_rho.F MITgcm-checkpoint68i/model/src/diags_sound_speed.F MITgcm-checkpoint68i/model/src/do_atmospheric_phys.F MITgcm-checkpoint68i/model/src/do_fields_blocking_exchanges.F MITgcm-checkpoint68i/model/src/do_oceanic_phys.F MITgcm-checkpoint68i/model/src/do_stagger_fields_exchanges.F MITgcm-checkpoint68i/model/src/do_statevars_diags.F MITgcm-checkpoint68i/model/src/do_statevars_tave.F MITgcm-checkpoint68i/model/src/do_the_model_io.F MITgcm-checkpoint68i/model/src/do_write_pickup.F MITgcm-checkpoint68i/model/src/dynamics.F MITgcm-checkpoint68i/model/src/external_fields_load.F MITgcm-checkpoint68i/model/src/external_forcing.F MITgcm-checkpoint68i/model/src/external_forcing_surf.F MITgcm-checkpoint68i/model/src/find_alpha.F MITgcm-checkpoint68i/model/src/find_hyd_press_1d.F MITgcm-checkpoint68i/model/src/find_rho.F MITgcm-checkpoint68i/model/src/forcing_surf_relax.F MITgcm-checkpoint68i/model/src/forward_step.F MITgcm-checkpoint68i/model/src/freesurf_rescale_g.F MITgcm-checkpoint68i/model/src/freeze_surface.F MITgcm-checkpoint68i/model/src/grad_sigma.F MITgcm-checkpoint68i/model/src/gsw_teos10.F MITgcm-checkpoint68i/model/src/impldiff.F MITgcm-checkpoint68i/model/src/ini_cartesian_grid.F MITgcm-checkpoint68i/model/src/ini_cg2d.F MITgcm-checkpoint68i/model/src/ini_cg3d.F MITgcm-checkpoint68i/model/src/ini_cori.F MITgcm-checkpoint68i/model/src/ini_curvilinear_grid.F MITgcm-checkpoint68i/model/src/ini_cylinder_grid.F MITgcm-checkpoint68i/model/src/ini_depths.F 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MITgcm-checkpoint68i/model/src/ini_sigma_hfac.F MITgcm-checkpoint68i/model/src/ini_spherical_polar_grid.F MITgcm-checkpoint68i/model/src/ini_theta.F MITgcm-checkpoint68i/model/src/ini_vel.F MITgcm-checkpoint68i/model/src/ini_vertical_grid.F MITgcm-checkpoint68i/model/src/initialise_fixed.F MITgcm-checkpoint68i/model/src/initialise_varia.F MITgcm-checkpoint68i/model/src/integr_continuity.F MITgcm-checkpoint68i/model/src/integrate_for_w.F MITgcm-checkpoint68i/model/src/load_fields_driver.F MITgcm-checkpoint68i/model/src/load_grid_spacing.F MITgcm-checkpoint68i/model/src/load_ref_files.F MITgcm-checkpoint68i/model/src/main_do_loop.F MITgcm-checkpoint68i/model/src/model_ad_diff.list MITgcm-checkpoint68i/model/src/momentum_correction_step.F MITgcm-checkpoint68i/model/src/packages_boot.F MITgcm-checkpoint68i/model/src/packages_check.F MITgcm-checkpoint68i/model/src/packages_error_msg.F MITgcm-checkpoint68i/model/src/packages_init_fixed.F MITgcm-checkpoint68i/model/src/packages_init_variables.F MITgcm-checkpoint68i/model/src/packages_print_msg.F MITgcm-checkpoint68i/model/src/packages_readparms.F MITgcm-checkpoint68i/model/src/packages_unused_msg.F MITgcm-checkpoint68i/model/src/packages_write_pickup.F MITgcm-checkpoint68i/model/src/plot_field.F MITgcm-checkpoint68i/model/src/port_rand.F MITgcm-checkpoint68i/model/src/post_cg3d.F MITgcm-checkpoint68i/model/src/pre_cg3d.F MITgcm-checkpoint68i/model/src/pressure_for_eos.F MITgcm-checkpoint68i/model/src/read_pickup.F MITgcm-checkpoint68i/model/src/remove_mean.F MITgcm-checkpoint68i/model/src/reset_nlfs_vars.F MITgcm-checkpoint68i/model/src/rotate_spherical_polar_grid.F MITgcm-checkpoint68i/model/src/rotate_uv2en.F MITgcm-checkpoint68i/model/src/salt_integrate.F MITgcm-checkpoint68i/model/src/seawater.F MITgcm-checkpoint68i/model/src/set_defaults.F MITgcm-checkpoint68i/model/src/set_grid_factors.F MITgcm-checkpoint68i/model/src/set_parms.F MITgcm-checkpoint68i/model/src/set_ref_state.F MITgcm-checkpoint68i/model/src/solve_for_pressure.F MITgcm-checkpoint68i/model/src/solve_pentadiagonal.F MITgcm-checkpoint68i/model/src/solve_tridiagonal.F MITgcm-checkpoint68i/model/src/solve_uv_tridiago.F MITgcm-checkpoint68i/model/src/state_summary.F MITgcm-checkpoint68i/model/src/swfrac.F MITgcm-checkpoint68i/model/src/taueddy_init_varia.F MITgcm-checkpoint68i/model/src/taueddy_tendency_apply.F MITgcm-checkpoint68i/model/src/temp_integrate.F MITgcm-checkpoint68i/model/src/the_main_loop.F MITgcm-checkpoint68i/model/src/the_model_main.F MITgcm-checkpoint68i/model/src/thermodynamics.F MITgcm-checkpoint68i/model/src/timestep.F MITgcm-checkpoint68i/model/src/timestep_tracer.F MITgcm-checkpoint68i/model/src/timestep_wvel.F MITgcm-checkpoint68i/model/src/tracers_correction_step.F MITgcm-checkpoint68i/model/src/tracers_iigw_correction.F MITgcm-checkpoint68i/model/src/turnoff_model_io.F MITgcm-checkpoint68i/model/src/update_cg2d.F MITgcm-checkpoint68i/model/src/update_etah.F MITgcm-checkpoint68i/model/src/update_etaws.F MITgcm-checkpoint68i/model/src/update_masks_etc.F MITgcm-checkpoint68i/model/src/update_r_star.F MITgcm-checkpoint68i/model/src/update_sigma.F MITgcm-checkpoint68i/model/src/update_surf_dr.F MITgcm-checkpoint68i/model/src/write_grid.F MITgcm-checkpoint68i/model/src/write_pickup.F MITgcm-checkpoint68i/model/src/write_state.F MITgcm-checkpoint68i/optim/ MITgcm-checkpoint68i/optim/Makefile MITgcm-checkpoint68i/optim/Makefile_macosx MITgcm-checkpoint68i/optim/README.md MITgcm-checkpoint68i/optim/blas1.h MITgcm-checkpoint68i/optim/data.ctrl MITgcm-checkpoint68i/optim/data.ecco MITgcm-checkpoint68i/optim/data.optim MITgcm-checkpoint68i/optim/flowchart_optim.txt MITgcm-checkpoint68i/optim/minimization.h MITgcm-checkpoint68i/optim/optim.h MITgcm-checkpoint68i/optim/optim_initmod.F MITgcm-checkpoint68i/optim/optim_main.F MITgcm-checkpoint68i/optim/optim_numbmod.F MITgcm-checkpoint68i/optim/optim_readdata.F MITgcm-checkpoint68i/optim/optim_sub.F MITgcm-checkpoint68i/optim/optim_write_control.F MITgcm-checkpoint68i/optim/optim_writedata.F MITgcm-checkpoint68i/optim/simul.F MITgcm-checkpoint68i/optim/to_do.txt MITgcm-checkpoint68i/optim/utils.F MITgcm-checkpoint68i/optim/xerbla.F MITgcm-checkpoint68i/pkg/ MITgcm-checkpoint68i/pkg/admtlm/ MITgcm-checkpoint68i/pkg/admtlm/ADMTLM_OPTIONS.h MITgcm-checkpoint68i/pkg/admtlm/admtlm_bypassad.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_driver.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd2model.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_init_fixed.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_map.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_metric.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_model2dsvd.F MITgcm-checkpoint68i/pkg/admtlm/arpack_debug.h MITgcm-checkpoint68i/pkg/aim_v23/ MITgcm-checkpoint68i/pkg/aim_v23/AIM2DYN.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_CO2.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_FFIELDS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_GRID.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_OPTIONS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_PARAMS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_SIZE.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_TAVE.h MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2dyn.F MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2land.F MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2sioce.F MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics.F MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics_init.F MITgcm-checkpoint68i/pkg/aim_v23/aim_do_co2.F MITgcm-checkpoint68i/pkg/aim_v23/aim_do_physics.F MITgcm-checkpoint68i/pkg/aim_v23/aim_dyn2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_fields_load.F MITgcm-checkpoint68i/pkg/aim_v23/aim_initialise.F MITgcm-checkpoint68i/pkg/aim_v23/aim_land2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_land_impl.F MITgcm-checkpoint68i/pkg/aim_v23/aim_mnc_init.F MITgcm-checkpoint68i/pkg/aim_v23/aim_readparms.F MITgcm-checkpoint68i/pkg/aim_v23/aim_sice2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_sice_impl.F MITgcm-checkpoint68i/pkg/aim_v23/aim_surf_bc.F MITgcm-checkpoint68i/pkg/aim_v23/aim_tendency_apply.F MITgcm-checkpoint68i/pkg/aim_v23/aim_v23_description.tex MITgcm-checkpoint68i/pkg/aim_v23/aim_write_local.F MITgcm-checkpoint68i/pkg/aim_v23/aim_write_phys.F MITgcm-checkpoint68i/pkg/aim_v23/aim_write_tave.F MITgcm-checkpoint68i/pkg/aim_v23/com_cnvcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_forcing.h MITgcm-checkpoint68i/pkg/aim_v23/com_forcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_lsccon.h MITgcm-checkpoint68i/pkg/aim_v23/com_physcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_physvar.h MITgcm-checkpoint68i/pkg/aim_v23/com_radcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_radvar.h MITgcm-checkpoint68i/pkg/aim_v23/com_sflcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_vdicon.h MITgcm-checkpoint68i/pkg/aim_v23/phy_const.h MITgcm-checkpoint68i/pkg/aim_v23/phy_convmf.F MITgcm-checkpoint68i/pkg/aim_v23/phy_driver.F MITgcm-checkpoint68i/pkg/aim_v23/phy_inphys.F MITgcm-checkpoint68i/pkg/aim_v23/phy_lscond.F MITgcm-checkpoint68i/pkg/aim_v23/phy_radiat.F MITgcm-checkpoint68i/pkg/aim_v23/phy_shtorh.F MITgcm-checkpoint68i/pkg/aim_v23/phy_snow_precip.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_land.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_ocean.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_post.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_prep.F MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_sice.F MITgcm-checkpoint68i/pkg/aim_v23/phy_vdifsc.F MITgcm-checkpoint68i/pkg/atm2d/ MITgcm-checkpoint68i/pkg/atm2d/AGRID.h MITgcm-checkpoint68i/pkg/atm2d/ATM2D_OPTIONS.h MITgcm-checkpoint68i/pkg/atm2d/ATM2D_VARS.h MITgcm-checkpoint68i/pkg/atm2d/ATMSIZE.h MITgcm-checkpoint68i/pkg/atm2d/CPLIDS.h MITgcm-checkpoint68i/pkg/atm2d/DRIVER.h MITgcm-checkpoint68i/pkg/atm2d/OCNIDS.h MITgcm-checkpoint68i/pkg/atm2d/OCNSIZE.h MITgcm-checkpoint68i/pkg/atm2d/OCNVARS.h MITgcm-checkpoint68i/pkg/atm2d/accept_component_registrations.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_finish.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_init_fixed.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_init_vars.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_read_pickup.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_readparms.F MITgcm-checkpoint68i/pkg/atm2d/atm2d_write_pickup.F MITgcm-checkpoint68i/pkg/atm2d/atm2ocn_main.F MITgcm-checkpoint68i/pkg/atm2d/calc_1dto2d.F MITgcm-checkpoint68i/pkg/atm2d/calc_fileload.F MITgcm-checkpoint68i/pkg/atm2d/calc_zonal_means.F MITgcm-checkpoint68i/pkg/atm2d/cpl_recv_ocn_fields.F MITgcm-checkpoint68i/pkg/atm2d/cpl_recv_ocn_ocnconfig.F MITgcm-checkpoint68i/pkg/atm2d/cpl_register_ocn.F MITgcm-checkpoint68i/pkg/atm2d/cpl_send_ocn_atmconfig.F MITgcm-checkpoint68i/pkg/atm2d/cpl_send_ocn_fields.F MITgcm-checkpoint68i/pkg/atm2d/ctrparam.h MITgcm-checkpoint68i/pkg/atm2d/exch_component_configs.F MITgcm-checkpoint68i/pkg/atm2d/fixed_flux_add.F MITgcm-checkpoint68i/pkg/atm2d/forward_step_atm2d.F MITgcm-checkpoint68i/pkg/atm2d/get_ocnvars.F MITgcm-checkpoint68i/pkg/atm2d/init_atm2d.F MITgcm-checkpoint68i/pkg/atm2d/init_sumvars.F MITgcm-checkpoint68i/pkg/atm2d/initialise.F MITgcm-checkpoint68i/pkg/atm2d/month_end_diags.F MITgcm-checkpoint68i/pkg/atm2d/norm_ocn_fluxes.F MITgcm-checkpoint68i/pkg/atm2d/pass_thsice_fluxes.F MITgcm-checkpoint68i/pkg/atm2d/put_ocnvars.F MITgcm-checkpoint68i/pkg/atm2d/read_atmos.F MITgcm-checkpoint68i/pkg/atm2d/relax_add.F MITgcm-checkpoint68i/pkg/atm2d/subtract_means.F MITgcm-checkpoint68i/pkg/atm2d/sum_ocn_fluxes.F MITgcm-checkpoint68i/pkg/atm2d/sum_thsice_out.F MITgcm-checkpoint68i/pkg/atm2d/sum_yr_end_diags.F MITgcm-checkpoint68i/pkg/atm2d/tave_end_diags.F MITgcm-checkpoint68i/pkg/atm2d/yr_end_diags.F MITgcm-checkpoint68i/pkg/atm_common/ MITgcm-checkpoint68i/pkg/atm_common/ATM_COMMON_OPTIONS.h MITgcm-checkpoint68i/pkg/atm_common/atm_diagnostics_init.F MITgcm-checkpoint68i/pkg/atm_compon_interf/ MITgcm-checkpoint68i/pkg/atm_compon_interf/ATMCPL.h MITgcm-checkpoint68i/pkg/atm_compon_interf/ATM_CPL_OPTIONS.h MITgcm-checkpoint68i/pkg/atm_compon_interf/CPL_PARAMS.h MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_apply_import.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_check_cplconfig.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_cpl_read_pickup.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_export_atmconfig.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_export_fields.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_export_fld.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_get_atmconfig.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_import_fields.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_import_ocnconfig.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_aim_fields.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_aim_wndstr.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_dynvars.F MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_land.F 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MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_VARS.h MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad.flow MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_diff.list MITgcm-checkpoint68i/pkg/cd_code/cd_code_ini_vars.F MITgcm-checkpoint68i/pkg/cd_code/cd_code_init_fixed.F MITgcm-checkpoint68i/pkg/cd_code/cd_code_read_pickup.F MITgcm-checkpoint68i/pkg/cd_code/cd_code_scheme.F MITgcm-checkpoint68i/pkg/cd_code/cd_code_write_pickup.F MITgcm-checkpoint68i/pkg/cfc/ MITgcm-checkpoint68i/pkg/cfc/CFC.h MITgcm-checkpoint68i/pkg/cfc/CFC_ATMOS.h MITgcm-checkpoint68i/pkg/cfc/CFC_SIZE.h MITgcm-checkpoint68i/pkg/cfc/cfc11_forcing.F MITgcm-checkpoint68i/pkg/cfc/cfc11_surfforcing.F MITgcm-checkpoint68i/pkg/cfc/cfc12_forcing.F MITgcm-checkpoint68i/pkg/cfc/cfc12_surfforcing.F MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_diff.list MITgcm-checkpoint68i/pkg/cfc/cfc_atmos.F MITgcm-checkpoint68i/pkg/cfc/cfc_check.F MITgcm-checkpoint68i/pkg/cfc/cfc_fields_load.F MITgcm-checkpoint68i/pkg/cfc/cfc_param.F MITgcm-checkpoint68i/pkg/cfc/cfc_readparms.F MITgcm-checkpoint68i/pkg/cfc/cfc_tr_register.F MITgcm-checkpoint68i/pkg/cheapaml/ MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML.h MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML_OPTIONS.h MITgcm-checkpoint68i/pkg/cheapaml/cheapaml.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_calc_rhs.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_coare3_flux.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_copy_edges.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_diagnostics_init.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_fields_load.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_fixed.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_varia.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_lanl_flux.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_read_pickup.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_readparms.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_seaice.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_timestep.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_write_pickup.F MITgcm-checkpoint68i/pkg/chronos/ MITgcm-checkpoint68i/pkg/chronos/chronos.F MITgcm-checkpoint68i/pkg/chronos/chronos.h MITgcm-checkpoint68i/pkg/compon_communic/ MITgcm-checkpoint68i/pkg/compon_communic/CPLR_SIG.h MITgcm-checkpoint68i/pkg/compon_communic/comprecv_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/generate_tag.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_init.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_tile_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_init.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_tile_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_all_check.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2dbl.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2int.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2real.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_dbl2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init1.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2a.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2b.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_initcomp.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_int2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_match_comp.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_real2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_sortranks.F MITgcm-checkpoint68i/pkg/cost/ MITgcm-checkpoint68i/pkg/cost/COST_OPTIONS.h MITgcm-checkpoint68i/pkg/cost/adcost.h MITgcm-checkpoint68i/pkg/cost/cost.h MITgcm-checkpoint68i/pkg/cost/cost_accumulate_mean.F MITgcm-checkpoint68i/pkg/cost/cost_ad.flow MITgcm-checkpoint68i/pkg/cost/cost_ad_diff.list MITgcm-checkpoint68i/pkg/cost/cost_atlantic_heat.F MITgcm-checkpoint68i/pkg/cost/cost_check.F MITgcm-checkpoint68i/pkg/cost/cost_dependent_init.F MITgcm-checkpoint68i/pkg/cost/cost_depth.F MITgcm-checkpoint68i/pkg/cost/cost_final.F MITgcm-checkpoint68i/pkg/cost/cost_final_restore.F MITgcm-checkpoint68i/pkg/cost/cost_final_store.F MITgcm-checkpoint68i/pkg/cost/cost_init_varia.F MITgcm-checkpoint68i/pkg/cost/cost_readparms.F MITgcm-checkpoint68i/pkg/cost/cost_state_final.F MITgcm-checkpoint68i/pkg/cost/cost_test.F MITgcm-checkpoint68i/pkg/cost/cost_tile.F MITgcm-checkpoint68i/pkg/cost/cost_tracer.F MITgcm-checkpoint68i/pkg/cost/cost_vector.F MITgcm-checkpoint68i/pkg/cost/g_cost.h MITgcm-checkpoint68i/pkg/ctrl/ MITgcm-checkpoint68i/pkg/ctrl/CTRL_FIELDS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_GENARR.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_OBCS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_OPTIONS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_SIZE.h MITgcm-checkpoint68i/pkg/ctrl/adctrl_bound.F MITgcm-checkpoint68i/pkg/ctrl/ctrl.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_diff.list MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.flow MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound_tl.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_check.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_driver.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_depth_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_description.tex MITgcm-checkpoint68i/pkg/ctrl/ctrl_dummy.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen_rec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_mask.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcse.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsn.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcss.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsw.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getrec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_hfacc_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_ctrlvar.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_obcs_variables.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_rec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_variables.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_wet.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_local_params.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_forcing.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_genarr.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_gentim2d.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_ecco.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_genarr.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gentim2d.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_pack.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_readparms.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_fname.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_smooth.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_summary.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_swapffields.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_toolbox.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_unpack.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_weights.h MITgcm-checkpoint68i/pkg/ctrl/optim.h MITgcm-checkpoint68i/pkg/ctrl/optim_readparms.F MITgcm-checkpoint68i/pkg/debug/ MITgcm-checkpoint68i/pkg/debug/DEBUG_OPTIONS.h MITgcm-checkpoint68i/pkg/debug/chksum_tiled.F MITgcm-checkpoint68i/pkg/debug/debug_ad.flow MITgcm-checkpoint68i/pkg/debug/debug_call.F MITgcm-checkpoint68i/pkg/debug/debug_cs_corner_uv.F MITgcm-checkpoint68i/pkg/debug/debug_enter.F MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rl.F MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rs.F MITgcm-checkpoint68i/pkg/debug/debug_leave.F MITgcm-checkpoint68i/pkg/debug/debug_msg.F MITgcm-checkpoint68i/pkg/debug/debug_stats_rl.F MITgcm-checkpoint68i/pkg/debug/debug_stats_rs.F MITgcm-checkpoint68i/pkg/debug/fill_in_corners_rl.F MITgcm-checkpoint68i/pkg/debug/write_fullarray_rl.F MITgcm-checkpoint68i/pkg/debug/write_fullarray_rs.F MITgcm-checkpoint68i/pkg/diagnostics/ MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_CALC.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_SIZE.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGSTATS_REGIONS.h MITgcm-checkpoint68i/pkg/diagnostics/DIAG_OPTIONS.h MITgcm-checkpoint68i/pkg/diagnostics/diag_calc_psivel.F MITgcm-checkpoint68i/pkg/diagnostics/diag_cg2d.F MITgcm-checkpoint68i/pkg/diagnostics/diag_vegtile_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad.flow MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad_diff.list MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_addtolist.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_calc_phivel.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_check.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_clear.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_field.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_rs.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_state.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fract_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ini_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_early.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_fixed.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_varia.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_p2p.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_vert.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_is_on.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_list_check.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_main_init.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_mnc_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_read_pickup.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_readparms.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill_rs.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_levels.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_pointers.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_setdiag.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_status_error.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_sum_levels.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_summary.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_switch_onoff.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_utils.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_adj.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_pickup.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ascii_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_clear.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_close_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_global.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ini_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_local.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_mnc_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_others_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_output.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_pointers.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_regions.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_setdiag.F MITgcm-checkpoint68i/pkg/dic/ MITgcm-checkpoint68i/pkg/dic/DIC_ATMOS.h MITgcm-checkpoint68i/pkg/dic/DIC_COST.h MITgcm-checkpoint68i/pkg/dic/DIC_CTRL.h MITgcm-checkpoint68i/pkg/dic/DIC_LOAD.h MITgcm-checkpoint68i/pkg/dic/DIC_OPTIONS.h MITgcm-checkpoint68i/pkg/dic/DIC_VARS.h MITgcm-checkpoint68i/pkg/dic/alk_surfforcing.F MITgcm-checkpoint68i/pkg/dic/bio_export.F MITgcm-checkpoint68i/pkg/dic/calcite_saturation.F MITgcm-checkpoint68i/pkg/dic/car_flux.F MITgcm-checkpoint68i/pkg/dic/car_flux_omega_top.F MITgcm-checkpoint68i/pkg/dic/carbon_chem.F MITgcm-checkpoint68i/pkg/dic/dic_ad.flow MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_diff.list MITgcm-checkpoint68i/pkg/dic/dic_atmos.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_diags.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_forcing.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_init.F MITgcm-checkpoint68i/pkg/dic/dic_cost.F MITgcm-checkpoint68i/pkg/dic/dic_diagnostics_init.F MITgcm-checkpoint68i/pkg/dic/dic_fields_load.F MITgcm-checkpoint68i/pkg/dic/dic_fields_update.F MITgcm-checkpoint68i/pkg/dic/dic_ini_atmos.F MITgcm-checkpoint68i/pkg/dic/dic_ini_forcing.F MITgcm-checkpoint68i/pkg/dic/dic_init_fixed.F MITgcm-checkpoint68i/pkg/dic/dic_init_varia.F MITgcm-checkpoint68i/pkg/dic/dic_mnc_init.F MITgcm-checkpoint68i/pkg/dic/dic_read_co2_pickup.F MITgcm-checkpoint68i/pkg/dic/dic_read_pickup.F MITgcm-checkpoint68i/pkg/dic/dic_readparms.F MITgcm-checkpoint68i/pkg/dic/dic_set_control.F MITgcm-checkpoint68i/pkg/dic/dic_solvesaphe.F MITgcm-checkpoint68i/pkg/dic/dic_store_fluxco2.F MITgcm-checkpoint68i/pkg/dic/dic_surfforcing.F MITgcm-checkpoint68i/pkg/dic/dic_surfforcing_init.F MITgcm-checkpoint68i/pkg/dic/dic_tr_register.F MITgcm-checkpoint68i/pkg/dic/dic_write_pickup.F MITgcm-checkpoint68i/pkg/dic/fe_chem.F MITgcm-checkpoint68i/pkg/dic/insol.F MITgcm-checkpoint68i/pkg/dic/o2_surfforcing.F MITgcm-checkpoint68i/pkg/dic/phos_flux.F MITgcm-checkpoint68i/pkg/down_slope/ MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_OPTIONS.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_PARAMS.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_SIZE.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_VARS.h MITgcm-checkpoint68i/pkg/down_slope/dwnslp_ad_diff.list MITgcm-checkpoint68i/pkg/down_slope/dwnslp_apply.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_flow.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_rho.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_diagnostics_init.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_fixed.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_varia.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_readparms.F MITgcm-checkpoint68i/pkg/ebm/ MITgcm-checkpoint68i/pkg/ebm/EBM.h MITgcm-checkpoint68i/pkg/ebm/EBM_OPTIONS.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_diff.list MITgcm-checkpoint68i/pkg/ebm/ebm_area_t.F MITgcm-checkpoint68i/pkg/ebm/ebm_atmosphere.F MITgcm-checkpoint68i/pkg/ebm/ebm_driver.F MITgcm-checkpoint68i/pkg/ebm/ebm_ini_vars.F MITgcm-checkpoint68i/pkg/ebm/ebm_load_climatology.F MITgcm-checkpoint68i/pkg/ebm/ebm_readparms.F MITgcm-checkpoint68i/pkg/ebm/ebm_wind_perturb.F MITgcm-checkpoint68i/pkg/ebm/ebm_zonalmean.F MITgcm-checkpoint68i/pkg/ecco/ MITgcm-checkpoint68i/pkg/ecco/ECCO.h MITgcm-checkpoint68i/pkg/ecco/ECCO_OPTIONS.h MITgcm-checkpoint68i/pkg/ecco/ECCO_SIZE.h MITgcm-checkpoint68i/pkg/ecco/cost_averagesfields.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesflags.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesgeneric.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesinit.F MITgcm-checkpoint68i/pkg/ecco/cost_bp_read.F MITgcm-checkpoint68i/pkg/ecco/cost_forcing.F MITgcm-checkpoint68i/pkg/ecco/cost_gencal.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_all.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_assignperiod.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_boxmean.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_bpv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_customize.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_glbmean.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_moc.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_seaicev4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sshv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sstv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_transp.F MITgcm-checkpoint68i/pkg/ecco/cost_generic.F MITgcm-checkpoint68i/pkg/ecco/cost_genread.F MITgcm-checkpoint68i/pkg/ecco/cost_hyd.F MITgcm-checkpoint68i/pkg/ecco/cost_internal_params.F MITgcm-checkpoint68i/pkg/ecco/cost_obcs.F MITgcm-checkpoint68i/pkg/ecco/cost_obcs_ageos.F MITgcm-checkpoint68i/pkg/ecco/cost_obcse.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsn.F MITgcm-checkpoint68i/pkg/ecco/cost_obcss.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsvol.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsw.F MITgcm-checkpoint68i/pkg/ecco/cost_sla_read.F MITgcm-checkpoint68i/pkg/ecco/cost_sla_read_yd.F MITgcm-checkpoint68i/pkg/ecco/cost_ssh.F MITgcm-checkpoint68i/pkg/ecco/ecco_ad.flow MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_diff.list MITgcm-checkpoint68i/pkg/ecco/ecco_check.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost.h MITgcm-checkpoint68i/pkg/ecco/ecco_cost_driver.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_final.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_barfiles.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_fixed.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_varia.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_summary.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_weights.F MITgcm-checkpoint68i/pkg/ecco/ecco_diagnostics_init.F MITgcm-checkpoint68i/pkg/ecco/ecco_init_fixed.F MITgcm-checkpoint68i/pkg/ecco/ecco_init_varia.F MITgcm-checkpoint68i/pkg/ecco/ecco_local_params.h MITgcm-checkpoint68i/pkg/ecco/ecco_phys.F MITgcm-checkpoint68i/pkg/ecco/ecco_readparms.F MITgcm-checkpoint68i/pkg/ecco/ecco_summary.F MITgcm-checkpoint68i/pkg/ecco/ecco_toolbox.F MITgcm-checkpoint68i/pkg/ecco/stergloh_output.F MITgcm-checkpoint68i/pkg/embed_files/ MITgcm-checkpoint68i/pkg/embed_files/EMBED_FILES_OPTIONS.h MITgcm-checkpoint68i/pkg/embed_files/README.txt MITgcm-checkpoint68i/pkg/embed_files/decode_files.c MITgcm-checkpoint68i/pkg/embed_files/embed_files_init.F MITgcm-checkpoint68i/pkg/exch2/ MITgcm-checkpoint68i/pkg/exch2/Makefile MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_BUFFER.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_PARAMS.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_SIZE.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_TOPOLOGY.h MITgcm-checkpoint68i/pkg/exch2/W2_OPTIONS.h MITgcm-checkpoint68i/pkg/exch2/exch2.flow MITgcm-checkpoint68i/pkg/exch2/exch2_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_diff.list MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_check_depths.F MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_get_scal_bounds.F MITgcm-checkpoint68i/pkg/exch2/exch2_get_uv_bounds.F MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube_ad.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube_ad.template MITgcm-checkpoint68i/pkg/exch2/exch2_s3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_sm_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_agrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_bgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_cgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_dgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_z_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/w2_cumulsum_z_tile.F MITgcm-checkpoint68i/pkg/exch2/w2_e2setup.F MITgcm-checkpoint68i/pkg/exch2/w2_eeboot.F MITgcm-checkpoint68i/pkg/exch2/w2_map_procs.F MITgcm-checkpoint68i/pkg/exch2/w2_print_comm_sequence.F MITgcm-checkpoint68i/pkg/exch2/w2_print_e2setup.F MITgcm-checkpoint68i/pkg/exch2/w2_readparms.F MITgcm-checkpoint68i/pkg/exch2/w2_set_cs6_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_f2f_index.F MITgcm-checkpoint68i/pkg/exch2/w2_set_gen_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_map_cumsum.F MITgcm-checkpoint68i/pkg/exch2/w2_set_map_tiles.F MITgcm-checkpoint68i/pkg/exch2/w2_set_myown_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_single_facet.F MITgcm-checkpoint68i/pkg/exch2/w2_set_tile2tiles.F MITgcm-checkpoint68i/pkg/exf/ MITgcm-checkpoint68i/pkg/exf/EXF_CONSTANTS.h MITgcm-checkpoint68i/pkg/exf/EXF_FIELDS.h MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_PARAM.h MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_SIZE.h MITgcm-checkpoint68i/pkg/exf/EXF_OPTIONS.h MITgcm-checkpoint68i/pkg/exf/EXF_PARAM.h MITgcm-checkpoint68i/pkg/exf/TODO.txt MITgcm-checkpoint68i/pkg/exf/exf_ad.flow MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_diff.list MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots.F MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots__g.F MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots_ad.F MITgcm-checkpoint68i/pkg/exf/exf_bulkformulae.F MITgcm-checkpoint68i/pkg/exf/exf_check.F MITgcm-checkpoint68i/pkg/exf/exf_check_range.F MITgcm-checkpoint68i/pkg/exf/exf_description.tex MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_fill.F MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_init.F MITgcm-checkpoint68i/pkg/exf/exf_filter_rl.F MITgcm-checkpoint68i/pkg/exf/exf_getclim.F MITgcm-checkpoint68i/pkg/exf/exf_getffield_start.F MITgcm-checkpoint68i/pkg/exf/exf_getffieldrec.F MITgcm-checkpoint68i/pkg/exf/exf_getffields.F MITgcm-checkpoint68i/pkg/exf/exf_getfield_start.F MITgcm-checkpoint68i/pkg/exf/exf_getforcing.F MITgcm-checkpoint68i/pkg/exf/exf_getmonthsrec.F MITgcm-checkpoint68i/pkg/exf/exf_getsurfacefluxes.F MITgcm-checkpoint68i/pkg/exf/exf_getyearlyfieldname.F MITgcm-checkpoint68i/pkg/exf/exf_init_fixed.F MITgcm-checkpoint68i/pkg/exf/exf_init_fld.F MITgcm-checkpoint68i/pkg/exf/exf_init_interp.F MITgcm-checkpoint68i/pkg/exf/exf_init_varia.F MITgcm-checkpoint68i/pkg/exf/exf_interp.F MITgcm-checkpoint68i/pkg/exf/exf_interp_read.F MITgcm-checkpoint68i/pkg/exf/exf_interp_uv.F MITgcm-checkpoint68i/pkg/exf/exf_interpolate.F MITgcm-checkpoint68i/pkg/exf/exf_mapfields.F MITgcm-checkpoint68i/pkg/exf/exf_monitor.F MITgcm-checkpoint68i/pkg/exf/exf_monitor_ad.F MITgcm-checkpoint68i/pkg/exf/exf_radiation.F MITgcm-checkpoint68i/pkg/exf/exf_readparms.F MITgcm-checkpoint68i/pkg/exf/exf_set_fld.F MITgcm-checkpoint68i/pkg/exf/exf_set_gen.F MITgcm-checkpoint68i/pkg/exf/exf_set_obcs.F MITgcm-checkpoint68i/pkg/exf/exf_set_uv.F MITgcm-checkpoint68i/pkg/exf/exf_summary.F MITgcm-checkpoint68i/pkg/exf/exf_swapffields.F MITgcm-checkpoint68i/pkg/exf/exf_weight_sfx_diags.F MITgcm-checkpoint68i/pkg/exf/exf_wind.F MITgcm-checkpoint68i/pkg/exf/exf_zenithangle.F MITgcm-checkpoint68i/pkg/exf/exf_zenithangle_table.F MITgcm-checkpoint68i/pkg/fizhi/ MITgcm-checkpoint68i/pkg/fizhi/AtoC.F MITgcm-checkpoint68i/pkg/fizhi/CtoA.F MITgcm-checkpoint68i/pkg/fizhi/FIZHI_OPTIONS.h MITgcm-checkpoint68i/pkg/fizhi/cah-dat.h MITgcm-checkpoint68i/pkg/fizhi/cai-dat.h MITgcm-checkpoint68i/pkg/fizhi/chronos.h MITgcm-checkpoint68i/pkg/fizhi/co2-tran3.h MITgcm-checkpoint68i/pkg/fizhi/do_fizhi.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_SHP.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_SIZE.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_alarms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_chemistry_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_clockstuff.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagalarms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagnostics_init.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_driver.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_earth_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_fillnegs.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_gwdrag.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_chem.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_fixed.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vars.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_veg.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vegsurftiles.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_io_comms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_SIZE.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_lsm.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_lwrad.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_mnc_init.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_moist.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_mpistuff.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_ocean_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_rayleigh.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_read_pickup.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_readparms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_readwrite_vegtiles.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_step_diag.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_swrad.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_tendency_apply.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_turb.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_update_time.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_utils.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_wrapper.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_datetime.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_pickup.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_state.F MITgcm-checkpoint68i/pkg/fizhi/getcon.F MITgcm-checkpoint68i/pkg/fizhi/getpwhere.F MITgcm-checkpoint68i/pkg/fizhi/h2o-tran3.h MITgcm-checkpoint68i/pkg/fizhi/o3-tran3.h MITgcm-checkpoint68i/pkg/fizhi/sibber.h MITgcm-checkpoint68i/pkg/fizhi/slprs.F MITgcm-checkpoint68i/pkg/fizhi/snwmid.h MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_corr.F MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_fg.F MITgcm-checkpoint68i/pkg/fizhi/step_physics.F MITgcm-checkpoint68i/pkg/fizhi/update_chemistry_exports.F MITgcm-checkpoint68i/pkg/fizhi/update_earth_exports.F MITgcm-checkpoint68i/pkg/fizhi/update_ocean_exports.F MITgcm-checkpoint68i/pkg/flt/ MITgcm-checkpoint68i/pkg/flt/FLT.h MITgcm-checkpoint68i/pkg/flt/FLT_BUFF.h MITgcm-checkpoint68i/pkg/flt/FLT_OPTIONS.h MITgcm-checkpoint68i/pkg/flt/FLT_SIZE.h MITgcm-checkpoint68i/pkg/flt/README.flt MITgcm-checkpoint68i/pkg/flt/exch2_recv_get_vec.F MITgcm-checkpoint68i/pkg/flt/exch2_send_put_vec.F MITgcm-checkpoint68i/pkg/flt/exch_recv_get_vec.F MITgcm-checkpoint68i/pkg/flt/exch_send_put_vec.F MITgcm-checkpoint68i/pkg/flt/flt_down.F MITgcm-checkpoint68i/pkg/flt/flt_exch2.F MITgcm-checkpoint68i/pkg/flt/flt_exchg.F MITgcm-checkpoint68i/pkg/flt/flt_init_fixed.F MITgcm-checkpoint68i/pkg/flt/flt_init_varia.F MITgcm-checkpoint68i/pkg/flt/flt_interp_linear.F MITgcm-checkpoint68i/pkg/flt/flt_main.F MITgcm-checkpoint68i/pkg/flt/flt_mapping.F MITgcm-checkpoint68i/pkg/flt/flt_readparms.F MITgcm-checkpoint68i/pkg/flt/flt_runga2.F MITgcm-checkpoint68i/pkg/flt/flt_runga4.F MITgcm-checkpoint68i/pkg/flt/flt_traj.F MITgcm-checkpoint68i/pkg/flt/flt_up.F MITgcm-checkpoint68i/pkg/flt/flt_write_pickup.F MITgcm-checkpoint68i/pkg/frazil/ MITgcm-checkpoint68i/pkg/frazil/FRAZIL.h MITgcm-checkpoint68i/pkg/frazil/FRAZIL_OPTIONS.h MITgcm-checkpoint68i/pkg/frazil/frazil_ad.flow MITgcm-checkpoint68i/pkg/frazil/frazil_ad_diff.list MITgcm-checkpoint68i/pkg/frazil/frazil_calc_rhs.F MITgcm-checkpoint68i/pkg/frazil/frazil_description.tex MITgcm-checkpoint68i/pkg/frazil/frazil_diagnostics_init.F MITgcm-checkpoint68i/pkg/frazil/frazil_init_fixed.F MITgcm-checkpoint68i/pkg/frazil/frazil_init_varia.F MITgcm-checkpoint68i/pkg/frazil/frazil_tendency_apply.F MITgcm-checkpoint68i/pkg/gchem/ MITgcm-checkpoint68i/pkg/gchem/GCHEM.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_FIELDS.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_OPTIONS.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_SIZE.h MITgcm-checkpoint68i/pkg/gchem/gchem_ad_diff.list MITgcm-checkpoint68i/pkg/gchem/gchem_add_tendency.F MITgcm-checkpoint68i/pkg/gchem/gchem_calc_tendency.F MITgcm-checkpoint68i/pkg/gchem/gchem_check.F MITgcm-checkpoint68i/pkg/gchem/gchem_diagnostics_init.F MITgcm-checkpoint68i/pkg/gchem/gchem_fields_load.F MITgcm-checkpoint68i/pkg/gchem/gchem_forcing_sep.F MITgcm-checkpoint68i/pkg/gchem/gchem_init_fixed.F MITgcm-checkpoint68i/pkg/gchem/gchem_init_vari.F MITgcm-checkpoint68i/pkg/gchem/gchem_output.F MITgcm-checkpoint68i/pkg/gchem/gchem_readparms.F MITgcm-checkpoint68i/pkg/gchem/gchem_surfmean.F MITgcm-checkpoint68i/pkg/gchem/gchem_tr_register.F MITgcm-checkpoint68i/pkg/gchem/gchem_write_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/ MITgcm-checkpoint68i/pkg/generic_advdiff/GAD.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_FLUX_LIMITER.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_OPTIONS.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_SOM_VARS.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_diff.list MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advection.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advscheme.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_calc_rhs.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_check.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_del2.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_init.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_state.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_exch_som.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_implicit_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_fixed.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_varia.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_plm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_read_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_advect.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_exchanges.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_fill_cs_corner.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_lim_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_prep_cs_corner.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3c4_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_write_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/generic_advdiff.tex MITgcm-checkpoint68i/pkg/generic_advdiff/salt_fill.F MITgcm-checkpoint68i/pkg/ggl90/ MITgcm-checkpoint68i/pkg/ggl90/GGL90.h MITgcm-checkpoint68i/pkg/ggl90/GGL90_OPTIONS.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_diff.list MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_diff.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_visc.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_check.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_diagnostics_init.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_exchanges.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_idemix.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_fixed.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_varia.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_output.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_read_pickup.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_readparms.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_write_pickup.F MITgcm-checkpoint68i/pkg/gmredi/ MITgcm-checkpoint68i/pkg/gmredi/GMREDI.h MITgcm-checkpoint68i/pkg/gmredi/GMREDI_OPTIONS.h MITgcm-checkpoint68i/pkg/gmredi/GMREDI_TAVE.h MITgcm-checkpoint68i/pkg/gmredi/README_ADJOINT MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad.flow MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad_diff.list MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_bates_k.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_diff.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_eigs.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_b.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_bvp.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_qgleith.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_tensor.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_urms.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_check.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_description.tex MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_fill.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_impl.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_init.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_do_exch.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_fixed.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_varia.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_mnc_init.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_output.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_read_pickup.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_readparms.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_residual_flow.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_rtransport.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_limit.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_psi.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_write_pickup.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_xtransport.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_ytransport.F MITgcm-checkpoint68i/pkg/gmredi/submeso_calc_psi.F MITgcm-checkpoint68i/pkg/grdchk/ MITgcm-checkpoint68i/pkg/grdchk/GRDCHK_OPTIONS.h MITgcm-checkpoint68i/pkg/grdchk/grdchk.h MITgcm-checkpoint68i/pkg/grdchk/grdchk_check.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_description.tex MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_obcs_mask.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_position.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_getadxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_getxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_init.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_loc.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_main.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_print.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_readparms.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_setxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_summary.F MITgcm-checkpoint68i/pkg/gridalt/ MITgcm-checkpoint68i/pkg/gridalt/GRIDALT_OPTIONS.h MITgcm-checkpoint68i/pkg/gridalt/dyn2phys.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_diagnostics_init.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_initialise.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_mapping.h MITgcm-checkpoint68i/pkg/gridalt/gridalt_update.F MITgcm-checkpoint68i/pkg/gridalt/make_phys_grid.F MITgcm-checkpoint68i/pkg/gridalt/phys2dyn.F MITgcm-checkpoint68i/pkg/icefront/ MITgcm-checkpoint68i/pkg/icefront/ICEFRONT.h MITgcm-checkpoint68i/pkg/icefront/ICEFRONT_OPTIONS.h MITgcm-checkpoint68i/pkg/icefront/ICFSymbol.txt MITgcm-checkpoint68i/pkg/icefront/icefront_check.F MITgcm-checkpoint68i/pkg/icefront/icefront_description.tex MITgcm-checkpoint68i/pkg/icefront/icefront_diagnostics_init.F MITgcm-checkpoint68i/pkg/icefront/icefront_init_fixed.F MITgcm-checkpoint68i/pkg/icefront/icefront_init_varia.F MITgcm-checkpoint68i/pkg/icefront/icefront_readparms.F MITgcm-checkpoint68i/pkg/icefront/icefront_tendency_apply.F MITgcm-checkpoint68i/pkg/icefront/icefront_thermodynamics.F MITgcm-checkpoint68i/pkg/kl10/ MITgcm-checkpoint68i/pkg/kl10/KL10.h MITgcm-checkpoint68i/pkg/kl10/KL10_DIAGS.h MITgcm-checkpoint68i/pkg/kl10/KL10_OPTIONS.h MITgcm-checkpoint68i/pkg/kl10/KL10_TAVE.h MITgcm-checkpoint68i/pkg/kl10/kl10_calc.F MITgcm-checkpoint68i/pkg/kl10/kl10_calc_diff.F MITgcm-checkpoint68i/pkg/kl10/kl10_calc_visc.F MITgcm-checkpoint68i/pkg/kl10/kl10_check.F MITgcm-checkpoint68i/pkg/kl10/kl10_diagnostics_init.F MITgcm-checkpoint68i/pkg/kl10/kl10_init_fixed.F MITgcm-checkpoint68i/pkg/kl10/kl10_init_varia.F MITgcm-checkpoint68i/pkg/kl10/kl10_output.F MITgcm-checkpoint68i/pkg/kl10/kl10_readparms.F MITgcm-checkpoint68i/pkg/kpp/ MITgcm-checkpoint68i/pkg/kpp/KPP.h MITgcm-checkpoint68i/pkg/kpp/KPP_OPTIONS.h MITgcm-checkpoint68i/pkg/kpp/KPP_PARAMS.h MITgcm-checkpoint68i/pkg/kpp/KPP_TAVE.h MITgcm-checkpoint68i/pkg/kpp/kpp_ad_diff.list MITgcm-checkpoint68i/pkg/kpp/kpp_calc.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_ptr.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_s.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_t.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_visc.F MITgcm-checkpoint68i/pkg/kpp/kpp_check.F MITgcm-checkpoint68i/pkg/kpp/kpp_description.tex MITgcm-checkpoint68i/pkg/kpp/kpp_diagnostics_init.F MITgcm-checkpoint68i/pkg/kpp/kpp_do_exch.F MITgcm-checkpoint68i/pkg/kpp/kpp_forcing_surf.F MITgcm-checkpoint68i/pkg/kpp/kpp_init_fixed.F MITgcm-checkpoint68i/pkg/kpp/kpp_init_varia.F MITgcm-checkpoint68i/pkg/kpp/kpp_output.F MITgcm-checkpoint68i/pkg/kpp/kpp_readparms.F MITgcm-checkpoint68i/pkg/kpp/kpp_routines.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_ptr.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_s.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_t.F MITgcm-checkpoint68i/pkg/land/ MITgcm-checkpoint68i/pkg/land/LAND_OPTIONS.h MITgcm-checkpoint68i/pkg/land/LAND_PARAMS.h MITgcm-checkpoint68i/pkg/land/LAND_SIZE.h MITgcm-checkpoint68i/pkg/land/LAND_TAVE.h MITgcm-checkpoint68i/pkg/land/LAND_VARS.h MITgcm-checkpoint68i/pkg/land/land_albedo.F MITgcm-checkpoint68i/pkg/land/land_check.F MITgcm-checkpoint68i/pkg/land/land_diagnostics_init.F MITgcm-checkpoint68i/pkg/land/land_diagnostics_state.F MITgcm-checkpoint68i/pkg/land/land_do_diags.F MITgcm-checkpoint68i/pkg/land/land_impl_temp.F MITgcm-checkpoint68i/pkg/land/land_ini_vars.F MITgcm-checkpoint68i/pkg/land/land_init_fixed.F MITgcm-checkpoint68i/pkg/land/land_mnc_init.F MITgcm-checkpoint68i/pkg/land/land_monitor.F MITgcm-checkpoint68i/pkg/land/land_output.F MITgcm-checkpoint68i/pkg/land/land_read_pickup.F MITgcm-checkpoint68i/pkg/land/land_readparms.F MITgcm-checkpoint68i/pkg/land/land_stepfwd.F MITgcm-checkpoint68i/pkg/land/land_write_pickup.F MITgcm-checkpoint68i/pkg/layers/ MITgcm-checkpoint68i/pkg/layers/LAYERS.h MITgcm-checkpoint68i/pkg/layers/LAYERS_OPTIONS.h MITgcm-checkpoint68i/pkg/layers/LAYERS_SIZE.h MITgcm-checkpoint68i/pkg/layers/layers_ad_diff.list MITgcm-checkpoint68i/pkg/layers/layers_calc.F MITgcm-checkpoint68i/pkg/layers/layers_check.F MITgcm-checkpoint68i/pkg/layers/layers_diagnostics_init.F MITgcm-checkpoint68i/pkg/layers/layers_fluxcalc.F MITgcm-checkpoint68i/pkg/layers/layers_init_fixed.F MITgcm-checkpoint68i/pkg/layers/layers_init_varia.F MITgcm-checkpoint68i/pkg/layers/layers_mnc_init.F MITgcm-checkpoint68i/pkg/layers/layers_output.F MITgcm-checkpoint68i/pkg/layers/layers_readparms.F MITgcm-checkpoint68i/pkg/layers/layers_save.F MITgcm-checkpoint68i/pkg/layers/layers_thermodynamics.F MITgcm-checkpoint68i/pkg/layers/layers_wsurf_tr.F MITgcm-checkpoint68i/pkg/longstep/ MITgcm-checkpoint68i/pkg/longstep/LONGSTEP.h MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_OPTIONS.h MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_PARAMS.h MITgcm-checkpoint68i/pkg/longstep/README MITgcm-checkpoint68i/pkg/longstep/longstep_average.F MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d_fac.F MITgcm-checkpoint68i/pkg/longstep/longstep_check_iters.F MITgcm-checkpoint68i/pkg/longstep/longstep_correction_step.F MITgcm-checkpoint68i/pkg/longstep/longstep_diagnostics_init.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_fac.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_rs.F MITgcm-checkpoint68i/pkg/longstep/longstep_forcing_surf.F MITgcm-checkpoint68i/pkg/longstep/longstep_init_fixed.F MITgcm-checkpoint68i/pkg/longstep/longstep_init_varia.F MITgcm-checkpoint68i/pkg/longstep/longstep_readparms.F MITgcm-checkpoint68i/pkg/longstep/longstep_reset_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_thermodynamics.F MITgcm-checkpoint68i/pkg/matrix/ MITgcm-checkpoint68i/pkg/matrix/MATRIX.h MITgcm-checkpoint68i/pkg/matrix/MATRIX_OPTIONS.h MITgcm-checkpoint68i/pkg/matrix/matrix_init_varia.F MITgcm-checkpoint68i/pkg/matrix/matrix_output.F MITgcm-checkpoint68i/pkg/matrix/matrix_readparms.F MITgcm-checkpoint68i/pkg/matrix/matrix_store_tendency.F MITgcm-checkpoint68i/pkg/matrix/matrix_write_grid.F MITgcm-checkpoint68i/pkg/matrix/matrix_write_tendency.F MITgcm-checkpoint68i/pkg/mdsio/ MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_3D.h MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_WH.h MITgcm-checkpoint68i/pkg/mdsio/MDSIO_OPTIONS.h MITgcm-checkpoint68i/pkg/mdsio/mdsio_ad.flow MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertorl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_check4file.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_facef_read.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl_slice.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rs.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_meta.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_section.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_tape.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_whalos.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_readvec_loc.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_slice.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_segxtorx_2d.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_metafiles.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rs.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_meta.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_section.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_tape.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_whalos.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_writelocal.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_writevec_loc.F MITgcm-checkpoint68i/pkg/mnc/ MITgcm-checkpoint68i/pkg/mnc/CPP_OPTIONS.t MITgcm-checkpoint68i/pkg/mnc/MNC_BUFF.h MITgcm-checkpoint68i/pkg/mnc/MNC_COMMON.h MITgcm-checkpoint68i/pkg/mnc/MNC_OPTIONS.h MITgcm-checkpoint68i/pkg/mnc/MNC_PARAMS.h MITgcm-checkpoint68i/pkg/mnc/MNC_SIZE.h MITgcm-checkpoint68i/pkg/mnc/Makefile MITgcm-checkpoint68i/pkg/mnc/PACKAGES_CONFIG.t MITgcm-checkpoint68i/pkg/mnc/README.txt MITgcm-checkpoint68i/pkg/mnc/SIZE.t MITgcm-checkpoint68i/pkg/mnc/TESTING_README.txt MITgcm-checkpoint68i/pkg/mnc/build_netcdf_stubs MITgcm-checkpoint68i/pkg/mnc/mnc_ad.flow MITgcm-checkpoint68i/pkg/mnc/mnc_create_dir.c MITgcm-checkpoint68i/pkg/mnc/mnc_cw_citer.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_cvars.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_fsize.c MITgcm-checkpoint68i/pkg/mnc/mnc_cw_init.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_missingvals.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_model_attr.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_readwrite.template MITgcm-checkpoint68i/pkg/mnc/mnc_cw_udim.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_write_grid_info.F MITgcm-checkpoint68i/pkg/mnc/mnc_cwrapper.F MITgcm-checkpoint68i/pkg/mnc/mnc_description.tex MITgcm-checkpoint68i/pkg/mnc/mnc_dim.F MITgcm-checkpoint68i/pkg/mnc/mnc_dump.F MITgcm-checkpoint68i/pkg/mnc/mnc_file.F MITgcm-checkpoint68i/pkg/mnc/mnc_grid.F MITgcm-checkpoint68i/pkg/mnc/mnc_init.F MITgcm-checkpoint68i/pkg/mnc/mnc_readparms.F MITgcm-checkpoint68i/pkg/mnc/mnc_test_001.T MITgcm-checkpoint68i/pkg/mnc/mnc_test_002.T MITgcm-checkpoint68i/pkg/mnc/mnc_test_utils.T MITgcm-checkpoint68i/pkg/mnc/mnc_update_time.F MITgcm-checkpoint68i/pkg/mnc/mnc_utils.F MITgcm-checkpoint68i/pkg/mnc/mnc_var.F MITgcm-checkpoint68i/pkg/mnc/parse_local_info MITgcm-checkpoint68i/pkg/mnc/pre-defined_grids.txt MITgcm-checkpoint68i/pkg/mom_common/ MITgcm-checkpoint68i/pkg/mom_common/MOM_COMMON_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_common/MOM_VISC.h MITgcm-checkpoint68i/pkg/mom_common/mom_calc_3d_strain.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_absvort3.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hdiv.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hfacz.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_ke.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_relvort3.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_smag_3d.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_strain.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_tension.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_visc.F MITgcm-checkpoint68i/pkg/mom_common/mom_common_ad_diff.list MITgcm-checkpoint68i/pkg/mom_common/mom_diagnostics_init.F MITgcm-checkpoint68i/pkg/mom_common/mom_hdissip.F MITgcm-checkpoint68i/pkg/mom_common/mom_init_fixed.F MITgcm-checkpoint68i/pkg/mom_common/mom_quasihydrostatic.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_botdrag_coeff.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_implicit_r.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_rviscflux.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_uv_smag_3d.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_botdrag_coeff.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_implicit_r.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_rviscflux.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_limit.F MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_stretch.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_smag_3d.F MITgcm-checkpoint68i/pkg/mom_fluxform/ MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM.h MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_fluxform/mom_calc_rtrans.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform_ad_diff.list MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_uu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_vu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_wu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_coriolis.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_del2u.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_cylinder.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_sphere.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_xviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_yviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_uv_boundary.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_uv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_vv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_wv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_coriolis.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_del2v.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_cylinder.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_sphere.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_xviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_yviscflux.F MITgcm-checkpoint68i/pkg/mom_vecinv/ MITgcm-checkpoint68i/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv_ad_diff.list MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_del2uv.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_hdissip.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_grad_ke.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_vertshear.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_grad_ke.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_vertshear.F MITgcm-checkpoint68i/pkg/monitor/ MITgcm-checkpoint68i/pkg/monitor/MONITOR.h MITgcm-checkpoint68i/pkg/monitor/MONITOR_OPTIONS.h MITgcm-checkpoint68i/pkg/monitor/mon_advcfl.F MITgcm-checkpoint68i/pkg/monitor/mon_advcflw.F MITgcm-checkpoint68i/pkg/monitor/mon_advcflw2.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_advcfl.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_description.tex MITgcm-checkpoint68i/pkg/monitor/mon_init.F MITgcm-checkpoint68i/pkg/monitor/mon_ke.F MITgcm-checkpoint68i/pkg/monitor/mon_out.F MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_set_iounit.F MITgcm-checkpoint68i/pkg/monitor/mon_set_pref.F MITgcm-checkpoint68i/pkg/monitor/mon_solution.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_latbnd_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_surfcor.F MITgcm-checkpoint68i/pkg/monitor/mon_vort3.F MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rs.F MITgcm-checkpoint68i/pkg/monitor/monitor.F MITgcm-checkpoint68i/pkg/monitor/monitor_ad.F MITgcm-checkpoint68i/pkg/monitor/monitor_ad.flow MITgcm-checkpoint68i/pkg/monitor/monitor_description.tex MITgcm-checkpoint68i/pkg/monitor/monitor_g.F MITgcm-checkpoint68i/pkg/my82/ MITgcm-checkpoint68i/pkg/my82/MY82.h MITgcm-checkpoint68i/pkg/my82/MY82_OPTIONS.h MITgcm-checkpoint68i/pkg/my82/my82_calc.F MITgcm-checkpoint68i/pkg/my82/my82_calc_diff.F MITgcm-checkpoint68i/pkg/my82/my82_calc_visc.F MITgcm-checkpoint68i/pkg/my82/my82_check.F MITgcm-checkpoint68i/pkg/my82/my82_diagnostics_init.F MITgcm-checkpoint68i/pkg/my82/my82_init_fixed.F MITgcm-checkpoint68i/pkg/my82/my82_init_varia.F MITgcm-checkpoint68i/pkg/my82/my82_output.F MITgcm-checkpoint68i/pkg/my82/my82_readparms.F MITgcm-checkpoint68i/pkg/my82/my82_ri_number.F MITgcm-checkpoint68i/pkg/mypackage/ MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE.h MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE_OPTIONS.h MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad.flow MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad_diff.list MITgcm-checkpoint68i/pkg/mypackage/mypackage_calc_rhs.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_check.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_description.tex MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_init.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_state.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_fixed.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_varia.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_mnc_init.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_read_pickup.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_readparms.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_tendency_apply.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_write_pickup.F MITgcm-checkpoint68i/pkg/obcs/ MITgcm-checkpoint68i/pkg/obcs/OBCS_FIELDS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_GRID.h MITgcm-checkpoint68i/pkg/obcs/OBCS_OPTIONS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_PARAMS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_PTRACERS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_SEAICE.h MITgcm-checkpoint68i/pkg/obcs/ORLANSKI.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad.flow MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_diff.list MITgcm-checkpoint68i/pkg/obcs/obcs_add_tides.F MITgcm-checkpoint68i/pkg/obcs/obcs_adjust.F MITgcm-checkpoint68i/pkg/obcs/obcs_adjust_uvice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_eta.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ptracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_r_star.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_seaice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_surf_dr.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ts.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uv.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uvice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_w.F MITgcm-checkpoint68i/pkg/obcs/obcs_balance_flow.F MITgcm-checkpoint68i/pkg/obcs/obcs_calc.F MITgcm-checkpoint68i/pkg/obcs/obcs_calc_stevens.F MITgcm-checkpoint68i/pkg/obcs/obcs_check.F MITgcm-checkpoint68i/pkg/obcs/obcs_check_depths.F MITgcm-checkpoint68i/pkg/obcs/obcs_copy_tracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_copy_uv_n.F MITgcm-checkpoint68i/pkg/obcs/obcs_description.tex MITgcm-checkpoint68i/pkg/obcs/obcs_diag_balance.F MITgcm-checkpoint68i/pkg/obcs/obcs_exchanges.F MITgcm-checkpoint68i/pkg/obcs/obcs_exf_load.F MITgcm-checkpoint68i/pkg/obcs/obcs_fields_load.F MITgcm-checkpoint68i/pkg/obcs/obcs_init_fixed.F MITgcm-checkpoint68i/pkg/obcs/obcs_init_variables.F MITgcm-checkpoint68i/pkg/obcs/obcs_mon_stats.F MITgcm-checkpoint68i/pkg/obcs/obcs_monitor.F MITgcm-checkpoint68i/pkg/obcs/obcs_output.F MITgcm-checkpoint68i/pkg/obcs/obcs_prescribe_read.F MITgcm-checkpoint68i/pkg/obcs/obcs_read_pickup.F MITgcm-checkpoint68i/pkg/obcs/obcs_readparms.F MITgcm-checkpoint68i/pkg/obcs/obcs_save_uv_n.F MITgcm-checkpoint68i/pkg/obcs/obcs_seaice_sponge.F MITgcm-checkpoint68i/pkg/obcs/obcs_set_connect.F MITgcm-checkpoint68i/pkg/obcs/obcs_sponge.F MITgcm-checkpoint68i/pkg/obcs/obcs_u1_adv_tracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_write_pickup.F MITgcm-checkpoint68i/pkg/obcs/orlanski_east.F MITgcm-checkpoint68i/pkg/obcs/orlanski_init.F MITgcm-checkpoint68i/pkg/obcs/orlanski_north.F MITgcm-checkpoint68i/pkg/obcs/orlanski_south.F MITgcm-checkpoint68i/pkg/obcs/orlanski_west.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_PARAMS.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_TAVE.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCNCPL.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCN_CPL_OPTIONS.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_fill.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_init.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_exch_configs.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_export_import_data.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_import_cplparms.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_ini_vars.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init_fixed.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_output.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_readparms.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_register.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_write_pickup.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_apply_import.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_check_cplconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_diags.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_read_pickup.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_data.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_fields.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_ocnconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_atmconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_fields.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_store_my_data.F MITgcm-checkpoint68i/pkg/offline/ MITgcm-checkpoint68i/pkg/offline/OFFLINE.h MITgcm-checkpoint68i/pkg/offline/OFFLINE_OPTIONS.h MITgcm-checkpoint68i/pkg/offline/OFFLINE_SWITCH.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_diff.list MITgcm-checkpoint68i/pkg/offline/offline_check.F MITgcm-checkpoint68i/pkg/offline/offline_fields_load.F MITgcm-checkpoint68i/pkg/offline/offline_get_diffus.F MITgcm-checkpoint68i/pkg/offline/offline_init_varia.F MITgcm-checkpoint68i/pkg/offline/offline_readparms.F MITgcm-checkpoint68i/pkg/offline/offline_reset_parms.F MITgcm-checkpoint68i/pkg/openad/ MITgcm-checkpoint68i/pkg/openad/OPENAD_OPTIONS.h MITgcm-checkpoint68i/pkg/openad/ad_s_different_multiple.F MITgcm-checkpoint68i/pkg/openad/ad_s_ifnblnk.F MITgcm-checkpoint68i/pkg/openad/ad_s_ilnblnk.F MITgcm-checkpoint68i/pkg/openad/ad_s_mds_reclen.F MITgcm-checkpoint68i/pkg/openad/externalDummies.F MITgcm-checkpoint68i/pkg/openad/findAndDiff.bash MITgcm-checkpoint68i/pkg/openad/inner_do_loop.F MITgcm-checkpoint68i/pkg/openad/openad_ad_diff.list MITgcm-checkpoint68i/pkg/openad/openad_checkpointInit.F MITgcm-checkpoint68i/pkg/openad/openad_dumpAdjoint.F MITgcm-checkpoint68i/pkg/openad/seawater.F MITgcm-checkpoint68i/pkg/openad/the_model_main.F MITgcm-checkpoint68i/pkg/opps/ MITgcm-checkpoint68i/pkg/opps/OPPS.h MITgcm-checkpoint68i/pkg/opps/OPPS_OPTIONS.h MITgcm-checkpoint68i/pkg/opps/opps_calc.F MITgcm-checkpoint68i/pkg/opps/opps_check.F MITgcm-checkpoint68i/pkg/opps/opps_init.F MITgcm-checkpoint68i/pkg/opps/opps_interface.F MITgcm-checkpoint68i/pkg/opps/opps_readparms.F MITgcm-checkpoint68i/pkg/pkg_depend MITgcm-checkpoint68i/pkg/pkg_groups MITgcm-checkpoint68i/pkg/pp81/ MITgcm-checkpoint68i/pkg/pp81/PP81.h MITgcm-checkpoint68i/pkg/pp81/PP81_OPTIONS.h MITgcm-checkpoint68i/pkg/pp81/pp81_calc.F MITgcm-checkpoint68i/pkg/pp81/pp81_calc_diff.F MITgcm-checkpoint68i/pkg/pp81/pp81_calc_visc.F MITgcm-checkpoint68i/pkg/pp81/pp81_check.F MITgcm-checkpoint68i/pkg/pp81/pp81_diagnostics_init.F MITgcm-checkpoint68i/pkg/pp81/pp81_init_fixed.F MITgcm-checkpoint68i/pkg/pp81/pp81_init_varia.F MITgcm-checkpoint68i/pkg/pp81/pp81_output.F MITgcm-checkpoint68i/pkg/pp81/pp81_readparms.F MITgcm-checkpoint68i/pkg/pp81/pp81_ri_number.F MITgcm-checkpoint68i/pkg/profiles/ MITgcm-checkpoint68i/pkg/profiles/PROFILES_OPTIONS.h MITgcm-checkpoint68i/pkg/profiles/PROFILES_SIZE.h MITgcm-checkpoint68i/pkg/profiles/active_file_control_profiles.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.flow MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_ad.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_g.F MITgcm-checkpoint68i/pkg/profiles/cost_profiles.F MITgcm-checkpoint68i/pkg/profiles/profiles.flow MITgcm-checkpoint68i/pkg/profiles/profiles.h MITgcm-checkpoint68i/pkg/profiles/profiles_ad_diff.list MITgcm-checkpoint68i/pkg/profiles/profiles_findunit.F MITgcm-checkpoint68i/pkg/profiles/profiles_ini_io.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_fixed.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_ncfile.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_varia.F MITgcm-checkpoint68i/pkg/profiles/profiles_inloop.F MITgcm-checkpoint68i/pkg/profiles/profiles_interp.F MITgcm-checkpoint68i/pkg/profiles/profiles_readparms.F MITgcm-checkpoint68i/pkg/profiles/profiles_readvector.F MITgcm-checkpoint68i/pkg/ptracers/ MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_FIELDS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_MOD.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_OPTIONS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_PARAMS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_SIZE.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_START.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_TAVE.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad.flow MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_diff.list MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_dump.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_adcommon.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_apply_forcing.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_calc_wsurf_tr.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_check.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_check_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_convect.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_debug.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_init.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_state.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_data_mod.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_mod.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_fields_blocking_exch.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_forcing_surf.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_fixed.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_varia.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_integrate.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_mnc_init.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor_ad.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_output.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_read_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_readparms.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_reset.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_set_iolabel.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_switch_onoff.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_timeave.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_turnoff_io.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_state.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_timeave.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_zonal_filt_apply.F MITgcm-checkpoint68i/pkg/rbcs/ MITgcm-checkpoint68i/pkg/rbcs/RBCS_FIELDS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_OPTIONS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_PARAMS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_SIZE.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_diff.list MITgcm-checkpoint68i/pkg/rbcs/rbcs_add_tendency.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_fields_load.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_fixed.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_varia.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_readparms.F MITgcm-checkpoint68i/pkg/regrid/ MITgcm-checkpoint68i/pkg/regrid/Makefile MITgcm-checkpoint68i/pkg/regrid/REGRID.h MITgcm-checkpoint68i/pkg/regrid/REGRID_OPTIONS.h MITgcm-checkpoint68i/pkg/regrid/REGRID_SIZE.h MITgcm-checkpoint68i/pkg/regrid/regrid_check.F MITgcm-checkpoint68i/pkg/regrid/regrid_description.tex MITgcm-checkpoint68i/pkg/regrid/regrid_init_fixed.F MITgcm-checkpoint68i/pkg/regrid/regrid_init_varia.F MITgcm-checkpoint68i/pkg/regrid/regrid_mnc_init.F MITgcm-checkpoint68i/pkg/regrid/regrid_readparms.F MITgcm-checkpoint68i/pkg/regrid/regrid_scalar_out.template MITgcm-checkpoint68i/pkg/runclock/ MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK.h MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK_OPTIONS.h MITgcm-checkpoint68i/pkg/runclock/runclock_check.F MITgcm-checkpoint68i/pkg/runclock/runclock_continue.F MITgcm-checkpoint68i/pkg/runclock/runclock_gettime.F MITgcm-checkpoint68i/pkg/runclock/runclock_init.F MITgcm-checkpoint68i/pkg/runclock/runclock_readparms.F MITgcm-checkpoint68i/pkg/rw/ MITgcm-checkpoint68i/pkg/rw/RW_MFLDS.h MITgcm-checkpoint68i/pkg/rw/RW_OPTIONS.h MITgcm-checkpoint68i/pkg/rw/get_write_global_fld.F MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rl.F MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rs.F MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rl.F MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rs.F MITgcm-checkpoint68i/pkg/rw/read_glvec_rl.F MITgcm-checkpoint68i/pkg/rw/read_glvec_rs.F MITgcm-checkpoint68i/pkg/rw/read_mflds.F MITgcm-checkpoint68i/pkg/rw/read_rec.F MITgcm-checkpoint68i/pkg/rw/rw_ad.flow MITgcm-checkpoint68i/pkg/rw/rw_ad_diff.list MITgcm-checkpoint68i/pkg/rw/rw_get_suffix.F MITgcm-checkpoint68i/pkg/rw/set_write_global_fld.F MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rs.F MITgcm-checkpoint68i/pkg/rw/write_glvec_rl.F MITgcm-checkpoint68i/pkg/rw/write_glvec_rs.F MITgcm-checkpoint68i/pkg/rw/write_local_rl.F MITgcm-checkpoint68i/pkg/rw/write_local_rs.F MITgcm-checkpoint68i/pkg/rw/write_rec.F MITgcm-checkpoint68i/pkg/salt_plume/ MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME.h MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME_OPTIONS.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_diff.list MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_apply.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_calc_depth.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_check.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_description.tex MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_fill.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_init.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_do_exch.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_forcing_surf.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_frac.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_fixed.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_varia.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_mnc_init.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_readparms.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_s.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_t.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_volfrac.F MITgcm-checkpoint68i/pkg/sbo/ MITgcm-checkpoint68i/pkg/sbo/SBO.h MITgcm-checkpoint68i/pkg/sbo/SBO_OPTIONS.h MITgcm-checkpoint68i/pkg/sbo/sbo_calc.F MITgcm-checkpoint68i/pkg/sbo/sbo_check.F MITgcm-checkpoint68i/pkg/sbo/sbo_description.tex MITgcm-checkpoint68i/pkg/sbo/sbo_output.F MITgcm-checkpoint68i/pkg/sbo/sbo_readparms.F MITgcm-checkpoint68i/pkg/sbo/sbo_rho.F MITgcm-checkpoint68i/pkg/seaice/ MITgcm-checkpoint68i/pkg/seaice/SEAICE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_COST.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_OPTIONS.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_PARAMS.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_SIZE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_TAVE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_TRACER.h MITgcm-checkpoint68i/pkg/seaice/advect.F MITgcm-checkpoint68i/pkg/seaice/cost_ice_test.F MITgcm-checkpoint68i/pkg/seaice/diffus.F MITgcm-checkpoint68i/pkg/seaice/dynsolver.F MITgcm-checkpoint68i/pkg/seaice/lsr.F MITgcm-checkpoint68i/pkg/seaice/ostres.F MITgcm-checkpoint68i/pkg/seaice/seaice.flow MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_diff.list MITgcm-checkpoint68i/pkg/seaice/seaice_ad_dump.F MITgcm-checkpoint68i/pkg/seaice/seaice_advdiff.F MITgcm-checkpoint68i/pkg/seaice/seaice_advection.F MITgcm-checkpoint68i/pkg/seaice/seaice_bottomdrag_coeffs.F MITgcm-checkpoint68i/pkg/seaice/seaice_budget_ocean.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_ice_strength.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_lhs.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_residual.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_rhs.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_strainrates.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_stressdiv.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_viscosities.F MITgcm-checkpoint68i/pkg/seaice/seaice_check.F MITgcm-checkpoint68i/pkg/seaice/seaice_check_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_accumulate_mean.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_areasst.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_concentration.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_driver.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_export.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_final.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_fixed.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_varia.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sensi.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sss.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sst.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_weights.F MITgcm-checkpoint68i/pkg/seaice/seaice_ctrl_map_ini.F MITgcm-checkpoint68i/pkg/seaice/seaice_description.tex MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_init.F MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_state.F MITgcm-checkpoint68i/pkg/seaice/seaice_diffusion.F MITgcm-checkpoint68i/pkg/seaice/seaice_do_ridging.F MITgcm-checkpoint68i/pkg/seaice/seaice_dynsolver.F MITgcm-checkpoint68i/pkg/seaice/seaice_evp.F MITgcm-checkpoint68i/pkg/seaice/seaice_fake.F MITgcm-checkpoint68i/pkg/seaice/seaice_fgmres.F MITgcm-checkpoint68i/pkg/seaice/seaice_freedrift.F MITgcm-checkpoint68i/pkg/seaice/seaice_get_dynforcing.F MITgcm-checkpoint68i/pkg/seaice/seaice_growth.F MITgcm-checkpoint68i/pkg/seaice/seaice_growth_adx.F MITgcm-checkpoint68i/pkg/seaice/seaice_init_fixed.F MITgcm-checkpoint68i/pkg/seaice/seaice_init_varia.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_redist.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_remap.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_sum.F MITgcm-checkpoint68i/pkg/seaice/seaice_jacvec.F MITgcm-checkpoint68i/pkg/seaice/seaice_jfnk.F MITgcm-checkpoint68i/pkg/seaice/seaice_krylov.F MITgcm-checkpoint68i/pkg/seaice/seaice_lsr.F MITgcm-checkpoint68i/pkg/seaice/seaice_map_thsice.F MITgcm-checkpoint68i/pkg/seaice/seaice_mnc_init.F MITgcm-checkpoint68i/pkg/seaice/seaice_model.F MITgcm-checkpoint68i/pkg/seaice/seaice_mom_advection.F MITgcm-checkpoint68i/pkg/seaice/seaice_monitor.F MITgcm-checkpoint68i/pkg/seaice/seaice_monitor_ad.F MITgcm-checkpoint68i/pkg/seaice/seaice_obcs_output.F MITgcm-checkpoint68i/pkg/seaice/seaice_ocean_stress.F MITgcm-checkpoint68i/pkg/seaice/seaice_oceandrag_coeffs.F MITgcm-checkpoint68i/pkg/seaice/seaice_output.F MITgcm-checkpoint68i/pkg/seaice/seaice_preconditioner.F MITgcm-checkpoint68i/pkg/seaice/seaice_prepare_ridging.F MITgcm-checkpoint68i/pkg/seaice/seaice_read_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_readparms.F MITgcm-checkpoint68i/pkg/seaice/seaice_reg_ridge.F MITgcm-checkpoint68i/pkg/seaice/seaice_solve4temp.F MITgcm-checkpoint68i/pkg/seaice/seaice_summary.F MITgcm-checkpoint68i/pkg/seaice/seaice_tracer_phys.F MITgcm-checkpoint68i/pkg/seaice/seaice_turnoff_io.F MITgcm-checkpoint68i/pkg/seaice/seaice_write_pickup.F MITgcm-checkpoint68i/pkg/shap_filt/ MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT.h MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT_OPTIONS.h MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_ad_diff.list MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_ts.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_uv.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_computvort.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_diagnostics_init.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_init_fixed.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_readparms.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_relvort3.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s1.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s2.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s4.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracerold.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_u.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s1.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2c.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s4.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_v.F MITgcm-checkpoint68i/pkg/shelfice/ MITgcm-checkpoint68i/pkg/shelfice/SHELFICE.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_COST.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_OPTIONS.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_TAVE.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_diff.list MITgcm-checkpoint68i/pkg/shelfice/shelfice_check.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_accumulate.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_final.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_shifwflx.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_diagnostics_drag.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing_surf.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_depths.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_fixed.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_varia.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_mask_seaice.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_mnc_init.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_output.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_read_pickup.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_readparms.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_c_mask.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_calc_w.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_state.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_uv_mask.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remeshing.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_step_icemass.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_thermodynamics.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_u_drag_coeff.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_v_drag_coeff.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_write_pickup.F MITgcm-checkpoint68i/pkg/showflops/ MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS.h MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_INIT.h MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_OPTIONS.h MITgcm-checkpoint68i/pkg/showflops/showflops_ad.flow MITgcm-checkpoint68i/pkg/showflops/showflops_init.F MITgcm-checkpoint68i/pkg/showflops/showflops_inloop.F MITgcm-checkpoint68i/pkg/showflops/showflops_insolve.F MITgcm-checkpoint68i/pkg/smooth/ MITgcm-checkpoint68i/pkg/smooth/SMOOTH.h MITgcm-checkpoint68i/pkg/smooth/SMOOTH_OPTIONS.h MITgcm-checkpoint68i/pkg/smooth/smooth2d.F MITgcm-checkpoint68i/pkg/smooth/smooth3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_ad_diff.list MITgcm-checkpoint68i/pkg/smooth/smooth_basic2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_check.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl2dw.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_description.tex MITgcm-checkpoint68i/pkg/smooth/smooth_diff2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_diff3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_hetero2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_impldiff.F MITgcm-checkpoint68i/pkg/smooth/smooth_init2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_init3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_init_fixed.F MITgcm-checkpoint68i/pkg/smooth/smooth_init_varia.F MITgcm-checkpoint68i/pkg/smooth/smooth_readparms.F MITgcm-checkpoint68i/pkg/smooth/smooth_rhs.F MITgcm-checkpoint68i/pkg/sphere/ MITgcm-checkpoint68i/pkg/sphere/exch_all_2d_rl.F MITgcm-checkpoint68i/pkg/sphere/sphere.F MITgcm-checkpoint68i/pkg/sphere/sphere.h MITgcm-checkpoint68i/pkg/sphere/sphere_ad.flow MITgcm-checkpoint68i/pkg/sphere/sphere_ad_diff.list MITgcm-checkpoint68i/pkg/streamice/ MITgcm-checkpoint68i/pkg/streamice/STREAMICE.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_ADV.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_BDRY.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CG.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CTRL_FLUX.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_OPTIONS.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_PETSC.h MITgcm-checkpoint68i/pkg/streamice/adstreamice_cg_solve.F MITgcm-checkpoint68i/pkg/streamice/adstreamice_invert_surf_forthick.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_prime_streamice.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice_prime.F MITgcm-checkpoint68i/pkg/streamice/phi_gl_streamice.F MITgcm-checkpoint68i/pkg/streamice/slope_limiter.F MITgcm-checkpoint68i/pkg/streamice/streamice.flow MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_diff.list MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_x.F MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_y.F MITgcm-checkpoint68i/pkg/streamice/streamice_adv_front.F MITgcm-checkpoint68i/pkg/streamice/streamice_advect_2dtracer.F MITgcm-checkpoint68i/pkg/streamice/streamice_advect_thickness.F MITgcm-checkpoint68i/pkg/streamice/streamice_apply_flux_ctrl.F MITgcm-checkpoint68i/pkg/streamice/streamice_bstress_exponent.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_functions.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_matfree.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_wrapper.F MITgcm-checkpoint68i/pkg/streamice/streamice_check.F MITgcm-checkpoint68i/pkg/streamice/streamice_cost_surf_accum.F MITgcm-checkpoint68i/pkg/streamice/streamice_diagnostics_state.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_fd.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_ppm.F MITgcm-checkpoint68i/pkg/streamice/streamice_dump.F MITgcm-checkpoint68i/pkg/streamice/streamice_dump_ad.F MITgcm-checkpoint68i/pkg/streamice/streamice_fields_load.F MITgcm-checkpoint68i/pkg/streamice/streamice_finalize_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_forced_buttress.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_fp_err_oad.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_fp_err.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err_oad.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_diagnostics.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_fixed.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_phi.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_varia.F MITgcm-checkpoint68i/pkg/streamice/streamice_initialise_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_invert_surf_forthick.F MITgcm-checkpoint68i/pkg/streamice/streamice_petsc_numerate.F MITgcm-checkpoint68i/pkg/streamice/streamice_petscmatdestroy.F MITgcm-checkpoint68i/pkg/streamice/streamice_read_pickup.F MITgcm-checkpoint68i/pkg/streamice/streamice_readparms.F MITgcm-checkpoint68i/pkg/streamice/streamice_taub.F MITgcm-checkpoint68i/pkg/streamice/streamice_timestep.F MITgcm-checkpoint68i/pkg/streamice/streamice_tridiag_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_upd_ffrac_uncoupled.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phi.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phistage.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve_openad.F MITgcm-checkpoint68i/pkg/streamice/streamice_velmask_upd.F MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta.F MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta_hybrid.F MITgcm-checkpoint68i/pkg/streamice/streamice_write_pickup.F MITgcm-checkpoint68i/pkg/thsice/ MITgcm-checkpoint68i/pkg/thsice/THSICE_COST.h MITgcm-checkpoint68i/pkg/thsice/THSICE_DEBUG.h MITgcm-checkpoint68i/pkg/thsice/THSICE_OPTIONS.h MITgcm-checkpoint68i/pkg/thsice/THSICE_PARAMS.h MITgcm-checkpoint68i/pkg/thsice/THSICE_SIZE.h MITgcm-checkpoint68i/pkg/thsice/THSICE_TAVE.h MITgcm-checkpoint68i/pkg/thsice/THSICE_VARS.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad.flow MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev1_dir.h 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MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/ MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/CPP_OPTIONS.h MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/DIAGNOSTICS_SIZE.h MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/SIZE.h MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/SIZE.h_mpi MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/apply_forcing.F MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/packages.conf MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/ MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/bathyPolR.bin MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data.mnc MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data.pkg MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/eedata 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MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/ MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/.gitignore MITgcm-checkpoint68i/verification/verification_parser.py MITgcm-checkpoint68i/verification/vermix/ MITgcm-checkpoint68i/verification/vermix/build/ MITgcm-checkpoint68i/verification/vermix/build/.gitignore MITgcm-checkpoint68i/verification/vermix/code/ MITgcm-checkpoint68i/verification/vermix/code/CPP_EEOPTIONS.h MITgcm-checkpoint68i/verification/vermix/code/CPP_OPTIONS.h MITgcm-checkpoint68i/verification/vermix/code/DIAGNOSTICS_SIZE.h MITgcm-checkpoint68i/verification/vermix/code/KPP_OPTIONS.h MITgcm-checkpoint68i/verification/vermix/code/SIZE.h MITgcm-checkpoint68i/verification/vermix/code/packages.conf MITgcm-checkpoint68i/verification/vermix/input.dd/ MITgcm-checkpoint68i/verification/vermix/input.dd/data MITgcm-checkpoint68i/verification/vermix/input.dd/data.kpp MITgcm-checkpoint68i/verification/vermix/input.ggl90/ MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.ggl90 MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.pkg MITgcm-checkpoint68i/verification/vermix/input.my82/ MITgcm-checkpoint68i/verification/vermix/input.my82/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.my82/data.my82 MITgcm-checkpoint68i/verification/vermix/input.my82/data.pkg MITgcm-checkpoint68i/verification/vermix/input.opps/ MITgcm-checkpoint68i/verification/vermix/input.opps/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.opps/data.opps MITgcm-checkpoint68i/verification/vermix/input.opps/data.pkg MITgcm-checkpoint68i/verification/vermix/input.pp81/ MITgcm-checkpoint68i/verification/vermix/input.pp81/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pkg MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pp81 MITgcm-checkpoint68i/verification/vermix/input/ 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MITgcm-checkpoint68i/verification/vermix/results/output.ggl90.txt MITgcm-checkpoint68i/verification/vermix/results/output.my82.txt MITgcm-checkpoint68i/verification/vermix/results/output.opps.txt MITgcm-checkpoint68i/verification/vermix/results/output.pp81.txt MITgcm-checkpoint68i/verification/vermix/results/output.txt MITgcm-checkpoint68i/verification/vermix/run/ MITgcm-checkpoint68i/verification/vermix/run/.gitignore [41;37m step #5: BuildMITgcm [0m GENMAKE : A program for GENerating MAKEfiles for the MITgcm project. For a quick list of options, use "genmake2 -h" or for more detail see the documentation, section "Building the model" (under "Getting Started") at: https://mitgcm.readthedocs.io/ === Processing options files and arguments === getting local config information: none found getting OPTFILE information: Warning: no OPTFILE specified so we'll look for possible settings === Searching for possible settings for OPTFILE === The platform appears to be: linux_amd64 The possible FORTRAN compilers found in your path are: gfortran f77 f95 mpif77 Setting OPTFILE to: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran using OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran" get Compiler-version: '12' getting AD_OPTFILE information: using AD_OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/adjoint_options/adjoint_default" check Fortran Compiler... pass (set FC_CHECK=5/5) check makedepend (local: 0, system: 1, 1) Turning on MPI cpp macros === Checking system libraries === Do we have the system() command using mpif77... yes Do we have the fdate() command using mpif77... yes Do we have the etime() command using mpif77... c,r: yes (SbR) Can we call simple C routines (here, "cloc()") using mpif77... yes Can we unlimit the stack size using mpif77... yes Can we register a signal handler using mpif77... yes Can we use stat() through C calls... yes Can we create NetCDF-enabled binaries... no skip check for LAPACK Libs Can we call FLUSH intrinsic subroutine... yes === Setting defaults === Adding MODS directories: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code Making source files in eesupp from templates Making source files in pkg/exch2 from templates Making source files in pkg/regrid from templates === Determining package settings === getting package dependency info from /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_depend getting package groups info from /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_groups checking list of packages to compile: using PKG_LIST="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/packages.conf" before group expansion packages are: gfd obcs shelfice diagnostics timeave replacing "gfd" with: mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor after group expansion packages are: mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor obcs shelfice diagnostics timeave applying DISABLE settings applying ENABLE settings packages are: debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave applying package dependency rules packages are: debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave Adding STANDARDDIRS='eesupp model' Searching for *OPTIONS.h files in order to warn about the presence of "#define "-type statements that are no longer allowed: found CPP_EEOPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h" found CPP_OPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h" Creating the list of files for the adjoint compiler. === Creating the Makefile === setting INCLUDES Determining the list of source and include files Writing makefile: Makefile Add the source list for AD code generation Making list of "exceptions" that need ".p" files Making list of NOOPTFILES Add rules for links Adding makedepend marker === Done === original 'Makefile' generated successfully => next steps: > make depend > make (<-- to generate executable) make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build' if [ ! -L cpl_issm.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/cpl_issm.F cpl_issm.F; fi if [ ! -L do_oceanic_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/do_oceanic_phys.F do_oceanic_phys.F; fi if [ ! -L eeboot_minimal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eeboot_minimal.F eeboot_minimal.F; fi if [ ! -L eedie.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eedie.F eedie.F; fi if [ ! -L chksum_tiled.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/chksum_tiled.F chksum_tiled.F; fi if [ ! -L debug_call.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_call.F debug_call.F; fi if [ ! -L debug_cs_corner_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_cs_corner_uv.F debug_cs_corner_uv.F; fi if [ ! -L debug_enter.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_enter.F debug_enter.F; fi if [ ! -L debug_fld_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rl.F debug_fld_stats_rl.F; fi if [ ! -L debug_fld_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rs.F debug_fld_stats_rs.F; fi if [ ! -L debug_leave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_leave.F debug_leave.F; fi if [ ! -L debug_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_msg.F debug_msg.F; fi if [ ! -L debug_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rl.F debug_stats_rl.F; fi if [ ! -L debug_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rs.F debug_stats_rs.F; fi if [ ! -L fill_in_corners_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/fill_in_corners_rl.F fill_in_corners_rl.F; fi if [ ! -L write_fullarray_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rl.F write_fullarray_rl.F; fi if [ ! -L write_fullarray_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rs.F write_fullarray_rs.F; fi if [ ! -L diag_calc_psivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_calc_psivel.F diag_calc_psivel.F; fi if [ ! -L diag_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_cg2d.F diag_cg2d.F; fi if [ ! -L diagnostics_addtolist.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_addtolist.F diagnostics_addtolist.F; fi if [ ! -L diagnostics_calc_phivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_calc_phivel.F diagnostics_calc_phivel.F; fi if [ ! -L diagnostics_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_check.F diagnostics_check.F; fi if [ ! -L diagnostics_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_clear.F diagnostics_clear.F; fi if [ ! -L diagnostics_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill.F diagnostics_fill.F; fi if [ ! -L diagnostics_fill_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_field.F diagnostics_fill_field.F; fi if [ ! -L diagnostics_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_rs.F diagnostics_fill_rs.F; fi if [ ! -L diagnostics_fill_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_state.F diagnostics_fill_state.F; fi if [ ! -L diagnostics_fract_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fract_fill.F diagnostics_fract_fill.F; fi if [ ! -L diagnostics_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_ini_io.F diagnostics_ini_io.F; fi if [ ! -L diagnostics_init_early.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_early.F diagnostics_init_early.F; fi if [ ! -L diagnostics_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_fixed.F diagnostics_init_fixed.F; fi if [ ! -L diagnostics_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_varia.F diagnostics_init_varia.F; fi if [ ! -L diagnostics_interp_p2p.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_p2p.F diagnostics_interp_p2p.F; fi if [ ! -L diagnostics_interp_vert.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_vert.F diagnostics_interp_vert.F; fi if [ ! -L diagnostics_is_on.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_is_on.F diagnostics_is_on.F; fi if [ ! -L diagnostics_list_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_list_check.F diagnostics_list_check.F; fi if [ ! -L diagnostics_main_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_main_init.F diagnostics_main_init.F; fi if [ ! -L diagnostics_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_mnc_out.F diagnostics_mnc_out.F; fi if [ ! -L diagnostics_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_out.F diagnostics_out.F; fi if [ ! -L diagnostics_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_readparms.F diagnostics_readparms.F; fi if [ ! -L diagnostics_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_read_pickup.F diagnostics_read_pickup.F; fi if [ ! -L diagnostics_scale_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill.F diagnostics_scale_fill.F; fi if [ ! -L diagnostics_scale_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill_rs.F diagnostics_scale_fill_rs.F; fi if [ ! -L diagnostics_set_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_calc.F diagnostics_set_calc.F; fi if [ ! -L diagnostics_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_setdiag.F diagnostics_setdiag.F; fi if [ ! -L diagnostics_set_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_levels.F diagnostics_set_levels.F; fi if [ ! -L diagnostics_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_pointers.F diagnostics_set_pointers.F; fi if [ ! -L diagnostics_status_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_status_error.F diagnostics_status_error.F; fi if [ ! -L diagnostics_sum_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_sum_levels.F diagnostics_sum_levels.F; fi if [ ! -L diagnostics_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_summary.F diagnostics_summary.F; fi if [ ! -L diagnostics_switch_onoff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_switch_onoff.F diagnostics_switch_onoff.F; fi if [ ! -L diagnostics_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_utils.F diagnostics_utils.F; fi if [ ! -L diagnostics_write_adj.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_adj.F diagnostics_write_adj.F; fi if [ ! -L diagnostics_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write.F diagnostics_write.F; fi if [ ! -L diagnostics_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_pickup.F diagnostics_write_pickup.F; fi if [ ! -L diagstats_ascii_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ascii_out.F diagstats_ascii_out.F; fi if [ ! -L diagstats_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_calc.F diagstats_calc.F; fi if [ ! -L diagstats_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_clear.F diagstats_clear.F; fi if [ ! -L diagstats_close_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_close_io.F diagstats_close_io.F; fi if [ ! -L diagstats_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_fill.F diagstats_fill.F; fi if [ ! -L diagstats_global.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_global.F diagstats_global.F; fi if [ ! -L diagstats_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ini_io.F diagstats_ini_io.F; fi if [ ! -L diagstats_local.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_local.F diagstats_local.F; fi if [ ! -L diagstats_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_mnc_out.F diagstats_mnc_out.F; fi if [ ! -L diagstats_others_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_others_calc.F diagstats_others_calc.F; fi if [ ! -L diagstats_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_output.F diagstats_output.F; fi if [ ! -L diagstats_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_setdiag.F diagstats_setdiag.F; fi if [ ! -L diagstats_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_pointers.F diagstats_set_pointers.F; fi if [ ! -L diagstats_set_regions.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_regions.F diagstats_set_regions.F; fi if [ ! -L diag_vegtile_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_vegtile_fill.F diag_vegtile_fill.F; fi if [ ! -L gad_advection.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advection.F gad_advection.F; fi if [ ! -L gad_advscheme.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advscheme.F gad_advscheme.F; fi if [ ! -L gad_biharm_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_r.F gad_biharm_r.F; fi if [ ! -L gad_biharm_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_x.F gad_biharm_x.F; fi if [ ! -L gad_biharm_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_y.F gad_biharm_y.F; fi if [ ! -L gad_c2_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_r.F gad_c2_adv_r.F; fi if [ ! -L gad_c2_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_x.F gad_c2_adv_x.F; fi if [ ! -L gad_c2_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_y.F gad_c2_adv_y.F; fi if [ ! -L gad_c2_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_impl_r.F gad_c2_impl_r.F; fi if [ ! -L gad_c4_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_r.F gad_c4_adv_r.F; fi if [ ! -L gad_c4_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_x.F gad_c4_adv_x.F; fi if [ ! -L gad_c4_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_y.F gad_c4_adv_y.F; fi if [ ! -L gad_calc_rhs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_calc_rhs.F gad_calc_rhs.F; fi if [ ! -L gad_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_check.F gad_check.F; fi if [ ! -L gad_del2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_del2.F gad_del2.F; fi if [ ! -L gad_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_init.F gad_diagnostics_init.F; fi if [ ! -L gad_diagnostics_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_state.F gad_diagnostics_state.F; fi if [ ! -L gad_diff_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_r.F gad_diff_r.F; fi if [ ! -L gad_diff_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_x.F gad_diff_x.F; fi if [ ! -L gad_diff_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_y.F gad_diff_y.F; fi if [ ! -L gad_dst2u1_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_r.F gad_dst2u1_adv_r.F; fi if [ ! -L gad_dst2u1_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_x.F gad_dst2u1_adv_x.F; fi if [ ! -L gad_dst2u1_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_y.F gad_dst2u1_adv_y.F; fi if [ ! -L gad_dst2u1_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_impl_r.F gad_dst2u1_impl_r.F; fi if [ ! -L gad_dst3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_r.F gad_dst3_adv_r.F; fi if [ ! -L gad_dst3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_x.F gad_dst3_adv_x.F; fi if [ ! -L gad_dst3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_y.F gad_dst3_adv_y.F; fi if [ ! -L gad_dst3fl_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_r.F gad_dst3fl_adv_r.F; fi if [ ! -L gad_dst3fl_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_x.F gad_dst3fl_adv_x.F; fi if [ ! -L gad_dst3fl_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_y.F gad_dst3fl_adv_y.F; fi if [ ! -L gad_dst3fl_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_impl_r.F gad_dst3fl_impl_r.F; fi if [ ! -L gad_exch_som.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_exch_som.F gad_exch_som.F; fi if [ ! -L gad_fluxlimit_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_r.F gad_fluxlimit_adv_r.F; fi if [ ! -L gad_fluxlimit_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_x.F gad_fluxlimit_adv_x.F; fi if [ ! -L gad_fluxlimit_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_y.F gad_fluxlimit_adv_y.F; fi if [ ! -L gad_fluxlimit_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_impl_r.F gad_fluxlimit_impl_r.F; fi if [ ! -L gad_grad_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_x.F gad_grad_x.F; fi if [ ! -L gad_grad_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_y.F gad_grad_y.F; fi if [ ! -L gad_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_implicit_r.F gad_implicit_r.F; fi if [ ! -L gad_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_fixed.F gad_init_fixed.F; fi if [ ! -L gad_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_varia.F gad_init_varia.F; fi if [ ! -L gad_os7mp_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_r.F gad_os7mp_adv_r.F; fi if [ ! -L gad_os7mp_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_x.F gad_os7mp_adv_x.F; fi if [ ! -L gad_os7mp_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_y.F gad_os7mp_adv_y.F; fi if [ ! -L gad_osc_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_r.F gad_osc_hat_r.F; fi if [ ! -L gad_osc_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_x.F gad_osc_hat_x.F; fi if [ ! -L gad_osc_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_y.F gad_osc_hat_y.F; fi if [ ! -L gad_osc_mul_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_r.F gad_osc_mul_r.F; fi if [ ! -L gad_osc_mul_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_x.F gad_osc_mul_x.F; fi if [ ! -L gad_osc_mul_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_y.F gad_osc_mul_y.F; fi if [ ! -L gad_plm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_plm_fun.F gad_plm_fun.F; fi if [ ! -L gad_ppm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_r.F gad_ppm_adv_r.F; fi if [ ! -L gad_ppm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_x.F gad_ppm_adv_x.F; fi if [ ! -L gad_ppm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_y.F gad_ppm_adv_y.F; fi if [ ! -L gad_ppm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_r.F gad_ppm_flx_r.F; fi if [ ! -L gad_ppm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_x.F gad_ppm_flx_x.F; fi if [ ! -L gad_ppm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_y.F gad_ppm_flx_y.F; fi if [ ! -L gad_ppm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_fun.F gad_ppm_fun.F; fi if [ ! -L gad_ppm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_r.F gad_ppm_hat_r.F; fi if [ ! -L gad_ppm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_x.F gad_ppm_hat_x.F; fi if [ ! -L gad_ppm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_y.F gad_ppm_hat_y.F; fi if [ ! -L gad_ppm_p3e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_r.F gad_ppm_p3e_r.F; fi if [ ! -L gad_ppm_p3e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_x.F gad_ppm_p3e_x.F; fi if [ ! -L gad_ppm_p3e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_y.F gad_ppm_p3e_y.F; fi if [ ! -L gad_pqm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_r.F gad_pqm_adv_r.F; fi if [ ! -L gad_pqm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_x.F gad_pqm_adv_x.F; fi if [ ! -L gad_pqm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_y.F gad_pqm_adv_y.F; fi if [ ! -L gad_pqm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_r.F gad_pqm_flx_r.F; fi if [ ! -L gad_pqm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_x.F gad_pqm_flx_x.F; fi if [ ! -L gad_pqm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_y.F gad_pqm_flx_y.F; fi if [ ! -L gad_pqm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_fun.F gad_pqm_fun.F; fi if [ ! -L gad_pqm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_r.F gad_pqm_hat_r.F; fi if [ ! -L gad_pqm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_x.F gad_pqm_hat_x.F; fi if [ ! -L gad_pqm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_y.F gad_pqm_hat_y.F; fi if [ ! -L gad_pqm_p5e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_r.F gad_pqm_p5e_r.F; fi if [ ! -L gad_pqm_p5e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_x.F gad_pqm_p5e_x.F; fi if [ ! -L gad_pqm_p5e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_y.F gad_pqm_p5e_y.F; fi if [ ! -L gad_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_read_pickup.F gad_read_pickup.F; fi if [ ! -L gad_som_advect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_advect.F gad_som_advect.F; fi if [ ! -L gad_som_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_r.F gad_som_adv_r.F; fi if [ ! -L gad_som_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_x.F gad_som_adv_x.F; fi if [ ! -L gad_som_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_y.F gad_som_adv_y.F; fi if [ ! -L gad_som_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_exchanges.F gad_som_exchanges.F; fi if [ ! -L gad_som_fill_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_fill_cs_corner.F gad_som_fill_cs_corner.F; fi if [ ! -L gad_som_lim_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_lim_r.F gad_som_lim_r.F; fi if [ ! -L gad_som_prep_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_prep_cs_corner.F gad_som_prep_cs_corner.F; fi if [ ! -L gad_u3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_r.F gad_u3_adv_r.F; fi if [ ! -L gad_u3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_x.F gad_u3_adv_x.F; fi if [ ! -L gad_u3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_y.F gad_u3_adv_y.F; fi if [ ! -L gad_u3c4_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3c4_impl_r.F gad_u3c4_impl_r.F; fi if [ ! -L gad_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_write_pickup.F gad_write_pickup.F; fi if [ ! -L salt_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/salt_fill.F salt_fill.F; fi if [ ! -L mdsio_buffertorl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertorl.F mdsio_buffertorl.F; fi if [ ! -L mdsio_buffertors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertors.F mdsio_buffertors.F; fi if [ ! -L mdsio_check4file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_check4file.F mdsio_check4file.F; fi if [ ! -L mdsio_facef_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_facef_read.F mdsio_facef_read.F; fi if [ ! -L mdsio_gl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl.F mdsio_gl.F; fi if [ ! -L mdsio_gl_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl_slice.F mdsio_gl_slice.F; fi if [ ! -L mdsio_pass_r4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4torl.F mdsio_pass_r4torl.F; fi if [ ! -L mdsio_pass_r4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4tors.F mdsio_pass_r4tors.F; fi if [ ! -L mdsio_pass_r8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8torl.F mdsio_pass_r8torl.F; fi if [ ! -L mdsio_pass_r8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8tors.F mdsio_pass_r8tors.F; fi if [ ! -L mdsio_rd_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rl.F mdsio_rd_rec_rl.F; fi if [ ! -L mdsio_rd_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rs.F mdsio_rd_rec_rs.F; fi if [ ! -L mdsio_read_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_field.F mdsio_read_field.F; fi if [ ! -L mdsio_read_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_meta.F mdsio_read_meta.F; fi if [ ! -L mdsio_read_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_section.F mdsio_read_section.F; fi if [ ! -L mdsio_read_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_tape.F mdsio_read_tape.F; fi if [ ! -L mdsio_readvec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_readvec_loc.F mdsio_readvec_loc.F; fi if [ ! -L mdsio_read_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_whalos.F mdsio_read_whalos.F; fi if [ ! -L mdsio_rw_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_field.F mdsio_rw_field.F; fi if [ ! -L mdsio_rw_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_slice.F mdsio_rw_slice.F; fi if [ ! -L mdsio_seg4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4torl.F mdsio_seg4torl.F; fi if [ ! -L mdsio_seg4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4tors.F mdsio_seg4tors.F; fi if [ ! -L mdsio_seg8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8torl.F mdsio_seg8torl.F; fi if [ ! -L mdsio_seg8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8tors.F mdsio_seg8tors.F; fi if [ ! -L mdsio_segxtorx_2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_segxtorx_2d.F mdsio_segxtorx_2d.F; fi if [ ! -L mdsio_write_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_field.F mdsio_write_field.F; fi if [ ! -L mdsio_writelocal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writelocal.F mdsio_writelocal.F; fi if [ ! -L mdsio_write_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_meta.F mdsio_write_meta.F; fi if [ ! -L mdsio_write_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_section.F mdsio_write_section.F; fi if [ ! -L mdsio_write_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_tape.F mdsio_write_tape.F; fi if [ ! -L mdsio_writevec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writevec_loc.F mdsio_writevec_loc.F; fi if [ ! -L mdsio_write_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_whalos.F mdsio_write_whalos.F; fi if [ ! -L mdsio_wr_metafiles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_metafiles.F mdsio_wr_metafiles.F; fi if [ ! -L mdsio_wr_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rl.F mdsio_wr_rec_rl.F; fi if [ ! -L mdsio_wr_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rs.F mdsio_wr_rec_rs.F; fi if [ ! -L mom_calc_3d_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_3d_strain.F mom_calc_3d_strain.F; fi if [ ! -L mom_calc_absvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_absvort3.F mom_calc_absvort3.F; fi if [ ! -L mom_calc_hdiv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hdiv.F mom_calc_hdiv.F; fi if [ ! -L mom_calc_hfacz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hfacz.F mom_calc_hfacz.F; fi if [ ! -L mom_calc_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_ke.F mom_calc_ke.F; fi if [ ! -L mom_calc_relvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_relvort3.F mom_calc_relvort3.F; fi if [ ! -L mom_calc_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_smag_3d.F mom_calc_smag_3d.F; fi if [ ! -L mom_calc_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_strain.F mom_calc_strain.F; fi if [ ! -L mom_calc_tension.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_tension.F mom_calc_tension.F; fi if [ ! -L mom_calc_visc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_visc.F mom_calc_visc.F; fi if [ ! -L mom_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_diagnostics_init.F mom_diagnostics_init.F; fi if [ ! -L mom_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_hdissip.F mom_hdissip.F; fi if [ ! -L mom_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_init_fixed.F mom_init_fixed.F; fi if [ ! -L mom_quasihydrostatic.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_quasihydrostatic.F mom_quasihydrostatic.F; fi if [ ! -L mom_u_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_botdrag_coeff.F mom_u_botdrag_coeff.F; fi if [ ! -L mom_u_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_coriolis_nh.F mom_u_coriolis_nh.F; fi if [ ! -L mom_u_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_implicit_r.F mom_u_implicit_r.F; fi if [ ! -L mom_u_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_metric_nh.F mom_u_metric_nh.F; fi if [ ! -L mom_u_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_rviscflux.F mom_u_rviscflux.F; fi if [ ! -L mom_u_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_sidedrag.F mom_u_sidedrag.F; fi if [ ! -L mom_uv_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_uv_smag_3d.F mom_uv_smag_3d.F; fi if [ ! -L mom_v_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_botdrag_coeff.F mom_v_botdrag_coeff.F; fi if [ ! -L mom_v_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_coriolis_nh.F mom_v_coriolis_nh.F; fi if [ ! -L mom_v_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_implicit_r.F mom_v_implicit_r.F; fi if [ ! -L mom_visc_qgl_limit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_limit.F mom_visc_qgl_limit.F; fi if [ ! -L mom_visc_qgl_stretch.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_stretch.F mom_visc_qgl_stretch.F; fi if [ ! -L mom_v_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_metric_nh.F mom_v_metric_nh.F; fi if [ ! -L mom_v_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_rviscflux.F mom_v_rviscflux.F; fi if [ ! -L mom_v_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_sidedrag.F mom_v_sidedrag.F; fi if [ ! -L mom_w_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_coriolis_nh.F mom_w_coriolis_nh.F; fi if [ ! -L mom_w_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_metric_nh.F mom_w_metric_nh.F; fi if [ ! -L mom_w_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_sidedrag.F mom_w_sidedrag.F; fi if [ ! -L mom_w_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_smag_3d.F mom_w_smag_3d.F; fi if [ ! -L mom_calc_rtrans.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_calc_rtrans.F mom_calc_rtrans.F; fi if [ ! -L mom_fluxform.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_fluxform.F mom_fluxform.F; fi if [ ! -L mom_u_adv_uu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_uu.F mom_u_adv_uu.F; fi if [ ! -L mom_u_adv_vu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_vu.F mom_u_adv_vu.F; fi if [ ! -L mom_u_adv_wu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_wu.F mom_u_adv_wu.F; fi if [ ! -L mom_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_coriolis.F mom_u_coriolis.F; fi if [ ! -L mom_u_del2u.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_del2u.F mom_u_del2u.F; fi if [ ! -L mom_u_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_cylinder.F mom_u_metric_cylinder.F; fi if [ ! -L mom_u_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_sphere.F mom_u_metric_sphere.F; fi if [ ! -L mom_uv_boundary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_uv_boundary.F mom_uv_boundary.F; fi if [ ! -L mom_u_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_xviscflux.F mom_u_xviscflux.F; fi if [ ! -L mom_u_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_yviscflux.F mom_u_yviscflux.F; fi if [ ! -L mom_v_adv_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_uv.F mom_v_adv_uv.F; fi if [ ! -L mom_v_adv_vv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_vv.F mom_v_adv_vv.F; fi if [ ! -L mom_v_adv_wv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_wv.F mom_v_adv_wv.F; fi if [ ! -L mom_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_coriolis.F mom_v_coriolis.F; fi if [ ! -L mom_v_del2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_del2v.F mom_v_del2v.F; fi if [ ! -L mom_v_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_cylinder.F mom_v_metric_cylinder.F; fi if [ ! -L mom_v_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_sphere.F mom_v_metric_sphere.F; fi if [ ! -L mom_v_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_xviscflux.F mom_v_xviscflux.F; fi if [ ! -L mom_v_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_yviscflux.F mom_v_yviscflux.F; fi if [ ! -L mom_vecinv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vecinv.F mom_vecinv.F; fi if [ ! -L mom_vi_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_coriolis.F mom_vi_coriolis.F; fi if [ ! -L mom_vi_del2uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_del2uv.F mom_vi_del2uv.F; fi if [ ! -L mom_vi_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_hdissip.F mom_vi_hdissip.F; fi if [ ! -L mom_vi_u_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F mom_vi_u_coriolis_c4.F; fi if [ ! -L mom_vi_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis.F mom_vi_u_coriolis.F; fi if [ ! -L mom_vi_u_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_grad_ke.F mom_vi_u_grad_ke.F; fi if [ ! -L mom_vi_u_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_vertshear.F mom_vi_u_vertshear.F; fi if [ ! -L mom_vi_v_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F mom_vi_v_coriolis_c4.F; fi if [ ! -L mom_vi_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis.F mom_vi_v_coriolis.F; fi if [ ! -L mom_vi_v_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_grad_ke.F mom_vi_v_grad_ke.F; fi if [ ! -L mom_vi_v_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_vertshear.F mom_vi_v_vertshear.F; fi if [ ! -L mon_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcfl.F mon_advcfl.F; fi if [ ! -L mon_advcflw2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw2.F mon_advcflw2.F; fi if [ ! -L mon_advcflw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw.F mon_advcflw.F; fi if [ ! -L mon_calc_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_advcfl.F mon_calc_advcfl.F; fi if [ ! -L mon_calc_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rl.F mon_calc_stats_rl.F; fi if [ ! -L mon_calc_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rs.F mon_calc_stats_rs.F; fi if [ ! -L mon_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_init.F mon_init.F; fi if [ ! -L monitor_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_ad.F monitor_ad.F; fi if [ ! -L monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor.F monitor.F; fi if [ ! -L monitor_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_g.F monitor_g.F; fi if [ ! -L mon_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_ke.F mon_ke.F; fi if [ ! -L mon_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_out.F mon_out.F; fi if [ ! -L mon_printstats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rl.F mon_printstats_rl.F; fi if [ ! -L mon_printstats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rs.F mon_printstats_rs.F; fi if [ ! -L mon_set_iounit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_iounit.F mon_set_iounit.F; fi if [ ! -L mon_set_pref.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_pref.F mon_set_pref.F; fi if [ ! -L mon_solution.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_solution.F mon_solution.F; fi if [ ! -L mon_stats_latbnd_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_latbnd_rl.F mon_stats_latbnd_rl.F; fi if [ ! -L mon_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rl.F mon_stats_rl.F; fi if [ ! -L mon_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rs.F mon_stats_rs.F; fi if [ ! -L mon_surfcor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_surfcor.F mon_surfcor.F; fi if [ ! -L mon_vort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_vort3.F mon_vort3.F; fi if [ ! -L mon_writestats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rl.F mon_writestats_rl.F; fi if [ ! -L mon_writestats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rs.F mon_writestats_rs.F; fi if [ ! -L obcs_add_tides.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_add_tides.F obcs_add_tides.F; fi if [ ! -L obcs_adjust.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust.F obcs_adjust.F; fi if [ ! -L obcs_adjust_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust_uvice.F obcs_adjust_uvice.F; fi if [ ! -L obcs_apply_eta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_eta.F obcs_apply_eta.F; fi if [ ! -L obcs_apply_ptracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ptracer.F obcs_apply_ptracer.F; fi if [ ! -L obcs_apply_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_r_star.F obcs_apply_r_star.F; fi if [ ! -L obcs_apply_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_seaice.F obcs_apply_seaice.F; fi if [ ! -L obcs_apply_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_surf_dr.F obcs_apply_surf_dr.F; fi if [ ! -L obcs_apply_ts.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ts.F obcs_apply_ts.F; fi if [ ! -L obcs_apply_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uv.F obcs_apply_uv.F; fi if [ ! -L obcs_apply_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uvice.F obcs_apply_uvice.F; fi if [ ! -L obcs_apply_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_w.F obcs_apply_w.F; fi if [ ! -L obcs_balance_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_balance_flow.F obcs_balance_flow.F; fi if [ ! -L obcs_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc.F obcs_calc.F; fi if [ ! -L obcs_calc_stevens.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc_stevens.F obcs_calc_stevens.F; fi if [ ! -L obcs_check_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check_depths.F obcs_check_depths.F; fi if [ ! -L obcs_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check.F obcs_check.F; fi if [ ! -L obcs_copy_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_tracer.F obcs_copy_tracer.F; fi if [ ! -L obcs_copy_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_uv_n.F obcs_copy_uv_n.F; fi if [ ! -L obcs_diag_balance.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_diag_balance.F obcs_diag_balance.F; fi if [ ! -L obcs_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exchanges.F obcs_exchanges.F; fi if [ ! -L obcs_exf_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exf_load.F obcs_exf_load.F; fi if [ ! -L obcs_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_fields_load.F obcs_fields_load.F; fi if [ ! -L obcs_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_fixed.F obcs_init_fixed.F; fi if [ ! -L obcs_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_variables.F obcs_init_variables.F; fi if [ ! -L obcs_monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_monitor.F obcs_monitor.F; fi if [ ! -L obcs_mon_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_mon_stats.F obcs_mon_stats.F; fi if [ ! -L obcs_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_output.F obcs_output.F; fi if [ ! -L obcs_prescribe_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_prescribe_read.F obcs_prescribe_read.F; fi if [ ! -L obcs_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_readparms.F obcs_readparms.F; fi if [ ! -L obcs_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_read_pickup.F obcs_read_pickup.F; fi if [ ! -L obcs_save_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_save_uv_n.F obcs_save_uv_n.F; fi if [ ! -L obcs_seaice_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_seaice_sponge.F obcs_seaice_sponge.F; fi if [ ! -L obcs_set_connect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_set_connect.F obcs_set_connect.F; fi if [ ! -L obcs_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_sponge.F obcs_sponge.F; fi if [ ! -L obcs_u1_adv_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_u1_adv_tracer.F obcs_u1_adv_tracer.F; fi if [ ! -L obcs_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_write_pickup.F obcs_write_pickup.F; fi if [ ! -L orlanski_east.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_east.F orlanski_east.F; fi if [ ! -L orlanski_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_init.F orlanski_init.F; fi if [ ! -L orlanski_north.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_north.F orlanski_north.F; fi if [ ! -L orlanski_south.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_south.F orlanski_south.F; fi if [ ! -L orlanski_west.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_west.F orlanski_west.F; fi if [ ! -L get_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/get_write_global_fld.F get_write_global_fld.F; fi if [ ! -L read_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rl.F read_fld_xy_rl.F; fi if [ ! -L read_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rs.F read_fld_xy_rs.F; fi if [ ! -L read_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rl.F read_fld_xyz_rl.F; fi if [ ! -L read_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rs.F read_fld_xyz_rs.F; fi if [ ! -L read_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rl.F read_glvec_rl.F; fi if [ ! -L read_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rs.F read_glvec_rs.F; fi if [ ! -L read_mflds.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_mflds.F read_mflds.F; fi if [ ! -L read_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_rec.F read_rec.F; fi if [ ! -L rw_get_suffix.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/rw_get_suffix.F rw_get_suffix.F; fi if [ ! -L set_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/set_write_global_fld.F set_write_global_fld.F; fi if [ ! -L write_fld_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rl.F write_fld_3d_rl.F; fi if [ ! -L write_fld_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rs.F write_fld_3d_rs.F; fi if [ ! -L write_fld_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rl.F write_fld_s3d_rl.F; fi if [ ! -L write_fld_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rs.F write_fld_s3d_rs.F; fi if [ ! -L write_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rl.F write_fld_xy_rl.F; fi if [ ! -L write_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rs.F write_fld_xy_rs.F; fi if [ ! -L write_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rl.F write_fld_xyz_rl.F; fi if [ ! -L write_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rs.F write_fld_xyz_rs.F; fi if [ ! -L write_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rl.F write_glvec_rl.F; fi if [ ! -L write_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rs.F write_glvec_rs.F; fi if [ ! -L write_local_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rl.F write_local_rl.F; fi if [ ! -L write_local_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rs.F write_local_rs.F; fi if [ ! -L write_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_rec.F write_rec.F; fi if [ ! -L shelfice_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_check.F shelfice_check.F; fi if [ ! -L shelfice_cost_accumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_accumulate.F shelfice_cost_accumulate.F; fi if [ ! -L shelfice_cost_final.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_final.F shelfice_cost_final.F; fi if [ ! -L shelfice_cost_shifwflx.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_shifwflx.F shelfice_cost_shifwflx.F; fi if [ ! -L shelfice_diagnostics_drag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_diagnostics_drag.F shelfice_diagnostics_drag.F; fi if [ ! -L shelfice_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing.F shelfice_forcing.F; fi if [ ! -L shelfice_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing_surf.F shelfice_forcing_surf.F; fi if [ ! -L shelfice_init_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_depths.F shelfice_init_depths.F; fi if [ ! -L shelfice_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_fixed.F shelfice_init_fixed.F; fi if [ ! -L shelfice_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_varia.F shelfice_init_varia.F; fi if [ ! -L shelfice_mask_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mask_seaice.F shelfice_mask_seaice.F; fi if [ ! -L shelfice_mnc_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mnc_init.F shelfice_mnc_init.F; fi if [ ! -L shelfice_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_output.F shelfice_output.F; fi if [ ! -L shelfice_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_readparms.F shelfice_readparms.F; fi if [ ! -L shelfice_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_read_pickup.F shelfice_read_pickup.F; fi if [ ! -L shelfice_remesh_calc_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_calc_w.F shelfice_remesh_calc_w.F; fi if [ ! -L shelfice_remesh_c_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_c_mask.F shelfice_remesh_c_mask.F; fi if [ ! -L shelfice_remeshing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remeshing.F shelfice_remeshing.F; fi if [ ! -L shelfice_remesh_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_state.F shelfice_remesh_state.F; fi if [ ! -L shelfice_remesh_uv_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_uv_mask.F shelfice_remesh_uv_mask.F; fi if [ ! -L shelfice_step_icemass.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_step_icemass.F shelfice_step_icemass.F; fi if [ ! -L shelfice_thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_thermodynamics.F shelfice_thermodynamics.F; fi if [ ! -L shelfice_u_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_u_drag_coeff.F shelfice_u_drag_coeff.F; fi if [ ! -L shelfice_v_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_v_drag_coeff.F shelfice_v_drag_coeff.F; fi if [ ! -L shelfice_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_write_pickup.F shelfice_write_pickup.F; fi if [ ! -L timeave_cumul_1k1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1k1t.F timeave_cumul_1k1t.F; fi if [ ! -L timeave_cumul_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1t.F timeave_cumul_1t.F; fi if [ ! -L timeave_cumul_1vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1vfc.F timeave_cumul_1vfc.F; fi if [ ! -L timeave_cumul_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2v.F timeave_cumul_2v.F; fi if [ ! -L timeave_cumul_2vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2vfc.F timeave_cumul_2vfc.F; fi if [ ! -L timeave_cumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumulate.F timeave_cumulate.F; fi if [ ! -L timeave_cumul_dif_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_dif_1t.F timeave_cumul_dif_1t.F; fi if [ ! -L timeave_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_init_fixed.F timeave_init_fixed.F; fi if [ ! -L timeave_norma_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_norma_2v.F timeave_norma_2v.F; fi if [ ! -L timeave_normalize.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_normalize.F timeave_normalize.F; fi if [ ! -L timeave_reset.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_reset.F timeave_reset.F; fi if [ ! -L timeave_statvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statvars.F timeave_statvars.F; fi if [ ! -L timeave_statv_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statv_write.F timeave_statv_write.F; fi if [ ! -L timeave_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_surf_flux.F timeave_surf_flux.F; fi if [ ! -L all_proc_die.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/all_proc_die.F all_proc_die.F; fi if [ ! -L bar2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar2.F bar2.F; fi if [ ! -L bar_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar_check.F bar_check.F; fi if [ ! -L barrier.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/barrier.F barrier.F; fi if [ ! -L check_threads.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/check_threads.F check_threads.F; fi if [ ! -L comm_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/comm_stats.F comm_stats.F; fi if [ ! -L cumulsum_z_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/cumulsum_z_tile.F cumulsum_z_tile.F; fi if [ ! -L different_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/different_multiple.F different_multiple.F; fi if [ ! -L diff_phase_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/diff_phase_multiple.F diff_phase_multiple.F; fi if [ ! -L eeboot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeboot.F eeboot.F; fi if [ ! -L eedata_example.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eedata_example.F eedata_example.F; fi if [ ! -L eeintro_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeintro_msg.F eeintro_msg.F; fi if [ ! -L eeset_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeset_parms.F eeset_parms.F; fi if [ ! -L eewrite_eeenv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eewrite_eeenv.F eewrite_eeenv.F; fi if [ ! -L exch0_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r4.F exch0_r4.F; fi if [ ! -L exch0_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r8.F exch0_r8.F; fi if [ ! -L exch0_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rl.F exch0_rl.F; fi if [ ! -L exch0_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rs.F exch0_rs.F; fi if [ ! -L exch1_bg_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r4_cube.F exch1_bg_r4_cube.F; fi if [ ! -L exch1_bg_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r8_cube.F exch1_bg_r8_cube.F; fi if [ ! -L exch1_bg_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rl_cube.F exch1_bg_rl_cube.F; fi if [ ! -L exch1_bg_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rs_cube.F exch1_bg_rs_cube.F; fi if [ ! -L exch1_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4_cube.F exch1_r4_cube.F; fi if [ ! -L exch1_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4.F exch1_r4.F; fi if [ ! -L exch1_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8_cube.F exch1_r8_cube.F; fi if [ ! -L exch1_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8.F exch1_r8.F; fi if [ ! -L exch1_rl_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_ad.F exch1_rl_ad.F; fi if [ ! -L exch1_rl_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube_ad.F exch1_rl_cube_ad.F; fi if [ ! -L exch1_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube.F exch1_rl_cube.F; fi if [ ! -L exch1_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl.F exch1_rl.F; fi if [ ! -L exch1_rs_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_ad.F exch1_rs_ad.F; fi if [ ! -L exch1_rs_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube_ad.F exch1_rs_cube_ad.F; fi if [ ! -L exch1_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube.F exch1_rs_cube.F; fi if [ ! -L exch1_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs.F exch1_rs.F; fi if [ ! -L exch1_uv_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r4_cube.F exch1_uv_r4_cube.F; fi if [ ! -L exch1_uv_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r8_cube.F exch1_uv_r8_cube.F; fi if [ ! -L exch1_uv_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rl_cube.F exch1_uv_rl_cube.F; fi if [ ! -L exch1_uv_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rs_cube.F exch1_uv_rs_cube.F; fi if [ ! -L exch1_z_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r4_cube.F exch1_z_r4_cube.F; fi if [ ! -L exch1_z_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r8_cube.F exch1_z_r8_cube.F; fi if [ ! -L exch1_z_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rl_cube.F exch1_z_rl_cube.F; fi if [ ! -L exch1_z_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rs_cube.F exch1_z_rs_cube.F; fi if [ ! -L exch_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r4.F exch_3d_r4.F; fi if [ ! -L exch_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r8.F exch_3d_r8.F; fi if [ ! -L exch_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rl.F exch_3d_rl.F; fi if [ ! -L exch_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rs.F exch_3d_rs.F; fi if [ ! -L exch_cycle_ebl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_cycle_ebl.F exch_cycle_ebl.F; fi if [ ! -L exch_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_init.F exch_init.F; fi if [ ! -L exch_r4_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_x.F exch_r4_recv_get_x.F; fi if [ ! -L exch_r4_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_y.F exch_r4_recv_get_y.F; fi if [ ! -L exch_r4_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_x.F exch_r4_send_put_x.F; fi if [ ! -L exch_r4_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_y.F exch_r4_send_put_y.F; fi if [ ! -L exch_r8_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_x.F exch_r8_recv_get_x.F; fi if [ ! -L exch_r8_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_y.F exch_r8_recv_get_y.F; fi if [ ! -L exch_r8_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_x.F exch_r8_send_put_x.F; fi if [ ! -L exch_r8_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_y.F exch_r8_send_put_y.F; fi if [ ! -L exch_rl_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_x.F exch_rl_recv_get_x.F; fi if [ ! -L exch_rl_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_y.F exch_rl_recv_get_y.F; fi if [ ! -L exch_rl_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_x.F exch_rl_send_put_x.F; fi if [ ! -L exch_rl_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_y.F exch_rl_send_put_y.F; fi if [ ! -L exch_rs_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_x.F exch_rs_recv_get_x.F; fi if [ ! -L exch_rs_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_y.F exch_rs_recv_get_y.F; fi if [ ! -L exch_rs_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_x.F exch_rs_send_put_x.F; fi if [ ! -L exch_rs_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_y.F exch_rs_send_put_y.F; fi if [ ! -L exch_s3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r4.F exch_s3d_r4.F; fi if [ ! -L exch_s3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r8.F exch_s3d_r8.F; fi if [ ! -L exch_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rl.F exch_s3d_rl.F; fi if [ ! -L exch_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rs.F exch_s3d_rs.F; fi if [ ! -L exch_sm_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r4.F exch_sm_3d_r4.F; fi if [ ! -L exch_sm_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r8.F exch_sm_3d_r8.F; fi if [ ! -L exch_sm_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rl.F exch_sm_3d_rl.F; fi if [ ! -L exch_sm_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rs.F exch_sm_3d_rs.F; fi if [ ! -L exch_uv_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r4.F exch_uv_3d_r4.F; fi if [ ! -L exch_uv_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r8.F exch_uv_3d_r8.F; fi if [ ! -L exch_uv_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rl.F exch_uv_3d_rl.F; fi if [ ! -L exch_uv_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rs.F exch_uv_3d_rs.F; fi if [ ! -L exch_uv_agrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r4.F; fi if [ ! -L exch_uv_agrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_r8.F; fi if [ ! -L exch_uv_agrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rl.F; fi if [ ! -L exch_uv_agrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rs.F exch_uv_agrid_3d_rs.F; fi if [ ! -L exch_uv_bgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r4.F; fi if [ ! -L exch_uv_bgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_r8.F; fi if [ ! -L exch_uv_bgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rl.F; fi if [ ! -L exch_uv_bgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rs.F exch_uv_bgrid_3d_rs.F; fi if [ ! -L exch_uv_dgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r4.F; fi if [ ! -L exch_uv_dgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_r8.F; fi if [ ! -L exch_uv_dgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rl.F; fi if [ ! -L exch_uv_dgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rs.F exch_uv_dgrid_3d_rs.F; fi if [ ! -L exch_uv_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r4.F exch_uv_xy_r4.F; fi if [ ! -L exch_uv_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r8.F exch_uv_xy_r8.F; fi if [ ! -L exch_uv_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rl.F exch_uv_xy_rl.F; fi if [ ! -L exch_uv_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rs.F exch_uv_xy_rs.F; fi if [ ! -L exch_uv_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r4.F exch_uv_xyz_r4.F; fi if [ ! -L exch_uv_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r8.F exch_uv_xyz_r8.F; fi if [ ! -L exch_uv_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rl.F exch_uv_xyz_rl.F; fi if [ ! -L exch_uv_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rs.F exch_uv_xyz_rs.F; fi if [ ! -L exch_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r4.F exch_xy_r4.F; fi if [ ! -L exch_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r8.F exch_xy_r8.F; fi if [ ! -L exch_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rl.F exch_xy_rl.F; fi if [ ! -L exch_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rs.F exch_xy_rs.F; fi if [ ! -L exch_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r4.F exch_xyz_r4.F; fi if [ ! -L exch_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r8.F exch_xyz_r8.F; fi if [ ! -L exch_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rl.F exch_xyz_rl.F; fi if [ ! -L exch_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rs.F exch_xyz_rs.F; fi if [ ! -L exch_z_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r4.F exch_z_3d_r4.F; fi if [ ! -L exch_z_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r8.F exch_z_3d_r8.F; fi if [ ! -L exch_z_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rl.F exch_z_3d_rl.F; fi if [ ! -L exch_z_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rs.F exch_z_3d_rs.F; fi if [ ! -L fill_cs_corner_ag_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_ag_rl.F fill_cs_corner_ag_rl.F; fi if [ ! -L fill_cs_corner_tr_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_tr_rl.F fill_cs_corner_tr_rl.F; fi if [ ! -L fill_cs_corner_uv_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rl.F fill_cs_corner_uv_rl.F; fi if [ ! -L fill_cs_corner_uv_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rs.F fill_cs_corner_uv_rs.F; fi if [ ! -L fool_the_compiler.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fool_the_compiler.F fool_the_compiler.F; fi if [ ! -L gather_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r4.F gather_2d_r4.F; fi if [ ! -L gather_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r8.F gather_2d_r8.F; fi if [ ! -L gather_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r4.F gather_2d_wh_r4.F; fi if [ ! -L gather_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r8.F gather_2d_wh_r8.F; fi if [ ! -L gather_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r4.F gather_vec_r4.F; fi if [ ! -L gather_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r8.F gather_vec_r8.F; fi if [ ! -L gather_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_xz.F gather_xz.F; fi if [ ! -L gather_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_yz.F gather_yz.F; fi if [ ! -L get_periodic_interval.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/get_periodic_interval.F get_periodic_interval.F; fi if [ ! -L global_max.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_max.F global_max.F; fi if [ ! -L global_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum.F global_sum.F; fi if [ ! -L global_sum_singlecpu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_singlecpu.F global_sum_singlecpu.F; fi if [ ! -L global_sum_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_tile.F global_sum_tile.F; fi if [ ! -L global_vec_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_vec_sum.F global_vec_sum.F; fi if [ ! -L gsum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsum.F gsum.F; fi if [ ! -L ini_communication_patterns.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_communication_patterns.F ini_communication_patterns.F; fi if [ ! -L ini_procs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_procs.F ini_procs.F; fi if [ ! -L ini_threading_environment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_threading_environment.F ini_threading_environment.F; fi if [ ! -L lef_zero.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/lef_zero.F lef_zero.F; fi if [ ! -L main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/main.F main.F; fi if [ ! -L master_cpu_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_io.F master_cpu_io.F; fi if [ ! -L master_cpu_thread.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_thread.F master_cpu_thread.F; fi if [ ! -L mds_byteswapi4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapi4.F mds_byteswapi4.F; fi if [ ! -L mds_byteswapr4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr4.F mds_byteswapr4.F; fi if [ ! -L mds_byteswapr8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr8.F mds_byteswapr8.F; fi if [ ! -L mdsfindunit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mdsfindunit.F mdsfindunit.F; fi if [ ! -L mds_flush.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_flush.F mds_flush.F; fi if [ ! -L mds_reclen.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_reclen.F mds_reclen.F; fi if [ ! -L memsync.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/memsync.F memsync.F; fi if [ ! -L nml_change_syntax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_change_syntax.F nml_change_syntax.F; fi if [ ! -L nml_set_terminator.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_set_terminator.F nml_set_terminator.F; fi if [ ! -L open_copy_data_file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/open_copy_data_file.F open_copy_data_file.F; fi if [ ! -L print.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/print.F print.F; fi if [ ! -L reset_halo.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/reset_halo.F reset_halo.F; fi if [ ! -L scatter_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r4.F scatter_2d_r4.F; fi if [ ! -L scatter_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r8.F scatter_2d_r8.F; fi if [ ! -L scatter_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r4.F scatter_2d_wh_r4.F; fi if [ ! -L scatter_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r8.F scatter_2d_wh_r8.F; fi if [ ! -L scatter_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r4.F scatter_vec_r4.F; fi if [ ! -L scatter_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r8.F scatter_vec_r8.F; fi if [ ! -L scatter_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_xz.F scatter_xz.F; fi if [ ! -L scatter_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_yz.F scatter_yz.F; fi if [ ! -L stop_if_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/stop_if_error.F stop_if_error.F; fi if [ ! -L timers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timers.F timers.F; fi if [ ! -L utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/utils.F utils.F; fi if [ ! -L write_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/write_utils.F write_utils.F; fi if [ ! -L adams_bashforth2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth2.F adams_bashforth2.F; fi if [ ! -L adams_bashforth3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth3.F adams_bashforth3.F; fi if [ ! -L add_walls2masks.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/add_walls2masks.F add_walls2masks.F; fi if [ ! -L apply_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/apply_forcing.F apply_forcing.F; fi if [ ! -L calc_3d_diffusivity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_3d_diffusivity.F calc_3d_diffusivity.F; fi if [ ! -L calc_adv_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_adv_flow.F calc_adv_flow.F; fi if [ ! -L calc_div_ghat.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_div_ghat.F calc_div_ghat.F; fi if [ ! -L calc_eddy_stress.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_eddy_stress.F calc_eddy_stress.F; fi if [ ! -L calc_grad_phi_fv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_fv.F calc_grad_phi_fv.F; fi if [ ! -L calc_grad_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_hyd.F calc_grad_phi_hyd.F; fi if [ ! -L calc_grad_phi_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_surf.F calc_grad_phi_surf.F; fi if [ ! -L calc_grid_angles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grid_angles.F calc_grid_angles.F; fi if [ ! -L calc_gw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_gw.F calc_gw.F; fi if [ ! -L calc_ivdc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_ivdc.F calc_ivdc.F; fi if [ ! -L calc_oce_mxlayer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_oce_mxlayer.F calc_oce_mxlayer.F; fi if [ ! -L calc_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_phi_hyd.F calc_phi_hyd.F; fi if [ ! -L calc_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_r_star.F calc_r_star.F; fi if [ ! -L calc_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_surf_dr.F calc_surf_dr.F; fi if [ ! -L calc_viscosity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_viscosity.F calc_viscosity.F; fi if [ ! -L calc_wsurf_tr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_wsurf_tr.F calc_wsurf_tr.F; fi if [ ! -L cg2d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_ex0.F cg2d_ex0.F; fi if [ ! -L cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d.F cg2d.F; fi if [ ! -L cg2d_nsa.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_nsa.F cg2d_nsa.F; fi if [ ! -L cg2d_sr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_sr.F cg2d_sr.F; fi if [ ! -L cg3d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d_ex0.F cg3d_ex0.F; fi if [ ! -L cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d.F cg3d.F; fi if [ ! -L check_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/check_pickup.F check_pickup.F; fi if [ ! -L config_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_check.F config_check.F; fi if [ ! -L config_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_summary.F config_summary.F; fi if [ ! -L convective_adjustment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment.F convective_adjustment.F; fi if [ ! -L convective_adjustment_ini.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment_ini.F convective_adjustment_ini.F; fi if [ ! -L convectively_mixtracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convectively_mixtracer.F convectively_mixtracer.F; fi if [ ! -L convective_weights.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_weights.F convective_weights.F; fi if [ ! -L correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/correction_step.F correction_step.F; fi if [ ! -L cycle_ab_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_ab_tracer.F cycle_ab_tracer.F; fi if [ ! -L cycle_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_tracer.F cycle_tracer.F; fi if [ ! -L diags_oceanic_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_oceanic_surf_flux.F diags_oceanic_surf_flux.F; fi if [ ! -L diags_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_hyd.F diags_phi_hyd.F; fi if [ ! -L diags_phi_rlow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_rlow.F diags_phi_rlow.F; fi if [ ! -L diags_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_rho.F diags_rho.F; fi if [ ! -L diags_sound_speed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_sound_speed.F diags_sound_speed.F; fi if [ ! -L do_atmospheric_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_atmospheric_phys.F do_atmospheric_phys.F; fi if [ ! -L do_fields_blocking_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_fields_blocking_exchanges.F do_fields_blocking_exchanges.F; fi if [ ! -L do_stagger_fields_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_stagger_fields_exchanges.F do_stagger_fields_exchanges.F; fi if [ ! -L do_statevars_diags.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_diags.F do_statevars_diags.F; fi if [ ! -L do_statevars_tave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_tave.F do_statevars_tave.F; fi if [ ! -L do_the_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_the_model_io.F do_the_model_io.F; fi if [ ! -L do_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_write_pickup.F do_write_pickup.F; fi if [ ! -L dynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/dynamics.F dynamics.F; fi if [ ! -L external_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_fields_load.F external_fields_load.F; fi if [ ! -L external_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing.F external_forcing.F; fi if [ ! -L external_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing_surf.F external_forcing_surf.F; fi if [ ! -L find_alpha.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_alpha.F find_alpha.F; fi if [ ! -L find_hyd_press_1d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_hyd_press_1d.F find_hyd_press_1d.F; fi if [ ! -L find_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_rho.F find_rho.F; fi if [ ! -L forcing_surf_relax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forcing_surf_relax.F forcing_surf_relax.F; fi if [ ! -L forward_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forward_step.F forward_step.F; fi if [ ! -L freesurf_rescale_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freesurf_rescale_g.F freesurf_rescale_g.F; fi if [ ! -L freeze_surface.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freeze_surface.F freeze_surface.F; fi if [ ! -L grad_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/grad_sigma.F grad_sigma.F; fi if [ ! -L gsw_teos10.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/gsw_teos10.F gsw_teos10.F; fi if [ ! -L impldiff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/impldiff.F impldiff.F; fi if [ ! -L ini_cartesian_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cartesian_grid.F ini_cartesian_grid.F; fi if [ ! -L ini_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg2d.F ini_cg2d.F; fi if [ ! -L ini_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg3d.F ini_cg3d.F; fi if [ ! -L ini_cori.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cori.F ini_cori.F; fi if [ ! -L ini_curvilinear_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_curvilinear_grid.F ini_curvilinear_grid.F; fi if [ ! -L ini_cylinder_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cylinder_grid.F ini_cylinder_grid.F; fi if [ ! -L ini_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_depths.F ini_depths.F; fi if [ ! -L ini_dynvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_dynvars.F ini_dynvars.F; fi if [ ! -L ini_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_eos.F ini_eos.F; fi if [ ! -L ini_ffields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_ffields.F ini_ffields.F; fi if [ ! -L ini_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_fields.F ini_fields.F; fi if [ ! -L ini_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_forcing.F ini_forcing.F; fi if [ ! -L ini_global_domain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_global_domain.F ini_global_domain.F; fi if [ ! -L ini_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_grid.F ini_grid.F; fi if [ ! -L ini_linear_phisurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_linear_phisurf.F ini_linear_phisurf.F; fi if [ ! -L ini_local_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_local_grid.F ini_local_grid.F; fi if [ ! -L ini_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_masks_etc.F ini_masks_etc.F; fi if [ ! -L ini_mixing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mixing.F ini_mixing.F; fi if [ ! -L ini_mnc_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mnc_vars.F ini_mnc_vars.F; fi if [ ! -L ini_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_model_io.F ini_model_io.F; fi if [ ! -L ini_nh_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_fields.F ini_nh_fields.F; fi if [ ! -L ini_nh_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_vars.F ini_nh_vars.F; fi if [ ! -L ini_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nlfs_vars.F ini_nlfs_vars.F; fi if [ ! -L ini_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_parms.F ini_parms.F; fi if [ ! -L ini_p_ground.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_p_ground.F ini_p_ground.F; fi if [ ! -L ini_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_pressure.F ini_pressure.F; fi if [ ! -L ini_psurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_psurf.F ini_psurf.F; fi if [ ! -L ini_salt.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_salt.F ini_salt.F; fi if [ ! -L ini_sigma_hfac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_sigma_hfac.F ini_sigma_hfac.F; fi if [ ! -L ini_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_spherical_polar_grid.F ini_spherical_polar_grid.F; fi if [ ! -L ini_theta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_theta.F ini_theta.F; fi if [ ! -L initialise_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_fixed.F initialise_fixed.F; fi if [ ! -L initialise_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_varia.F initialise_varia.F; fi if [ ! -L ini_vel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vel.F ini_vel.F; fi if [ ! -L ini_vertical_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vertical_grid.F ini_vertical_grid.F; fi if [ ! -L integrate_for_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integrate_for_w.F integrate_for_w.F; fi if [ ! -L integr_continuity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integr_continuity.F integr_continuity.F; fi if [ ! -L load_fields_driver.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_fields_driver.F load_fields_driver.F; fi if [ ! -L load_grid_spacing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_grid_spacing.F load_grid_spacing.F; fi if [ ! -L load_ref_files.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_ref_files.F load_ref_files.F; fi if [ ! -L main_do_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/main_do_loop.F main_do_loop.F; fi if [ ! -L momentum_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/momentum_correction_step.F momentum_correction_step.F; fi if [ ! -L packages_boot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_boot.F packages_boot.F; fi if [ ! -L packages_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_check.F packages_check.F; fi if [ ! -L packages_error_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_error_msg.F packages_error_msg.F; fi if [ ! -L packages_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_fixed.F packages_init_fixed.F; fi if [ ! -L packages_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_variables.F packages_init_variables.F; fi if [ ! -L packages_print_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_print_msg.F packages_print_msg.F; fi if [ ! -L packages_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_readparms.F packages_readparms.F; fi if [ ! -L packages_unused_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_unused_msg.F packages_unused_msg.F; fi if [ ! -L packages_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_write_pickup.F packages_write_pickup.F; fi if [ ! -L plot_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/plot_field.F plot_field.F; fi if [ ! -L port_rand.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/port_rand.F port_rand.F; fi if [ ! -L post_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/post_cg3d.F post_cg3d.F; fi if [ ! -L pre_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pre_cg3d.F pre_cg3d.F; fi if [ ! -L pressure_for_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pressure_for_eos.F pressure_for_eos.F; fi if [ ! -L read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/read_pickup.F read_pickup.F; fi if [ ! -L remove_mean.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/remove_mean.F remove_mean.F; fi if [ ! -L reset_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/reset_nlfs_vars.F reset_nlfs_vars.F; fi if [ ! -L rotate_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_spherical_polar_grid.F rotate_spherical_polar_grid.F; fi if [ ! -L rotate_uv2en.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_uv2en.F rotate_uv2en.F; fi if [ ! -L salt_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/salt_integrate.F salt_integrate.F; fi if [ ! -L seawater.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/seawater.F seawater.F; fi if [ ! -L set_defaults.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_defaults.F set_defaults.F; fi if [ ! -L set_grid_factors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_grid_factors.F set_grid_factors.F; fi if [ ! -L set_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_parms.F set_parms.F; fi if [ ! -L set_ref_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_ref_state.F set_ref_state.F; fi if [ ! -L solve_for_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_for_pressure.F solve_for_pressure.F; fi if [ ! -L solve_pentadiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_pentadiagonal.F solve_pentadiagonal.F; fi if [ ! -L solve_tridiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_tridiagonal.F solve_tridiagonal.F; fi if [ ! -L solve_uv_tridiago.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_uv_tridiago.F solve_uv_tridiago.F; fi if [ ! -L state_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/state_summary.F state_summary.F; fi if [ ! -L swfrac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/swfrac.F swfrac.F; fi if [ ! -L taueddy_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_init_varia.F taueddy_init_varia.F; fi if [ ! -L taueddy_tendency_apply.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_tendency_apply.F taueddy_tendency_apply.F; fi if [ ! -L temp_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/temp_integrate.F temp_integrate.F; fi if [ ! -L the_main_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_main_loop.F the_main_loop.F; fi if [ ! -L the_model_main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_model_main.F the_model_main.F; fi if [ ! -L thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/thermodynamics.F thermodynamics.F; fi if [ ! -L timestep.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep.F timestep.F; fi if [ ! -L timestep_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_tracer.F timestep_tracer.F; fi if [ ! -L timestep_wvel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_wvel.F timestep_wvel.F; fi if [ ! -L tracers_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_correction_step.F tracers_correction_step.F; fi if [ ! -L tracers_iigw_correction.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_iigw_correction.F tracers_iigw_correction.F; fi if [ ! -L turnoff_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/turnoff_model_io.F turnoff_model_io.F; fi if [ ! -L update_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_cg2d.F update_cg2d.F; fi if [ ! -L update_etah.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etah.F update_etah.F; fi if [ ! -L update_etaws.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etaws.F update_etaws.F; fi if [ ! -L update_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_masks_etc.F update_masks_etc.F; fi if [ ! -L update_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_r_star.F update_r_star.F; fi if [ ! -L update_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_sigma.F update_sigma.F; fi if [ ! -L update_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_surf_dr.F update_surf_dr.F; fi if [ ! -L write_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_grid.F write_grid.F; fi if [ ! -L write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_pickup.F write_pickup.F; fi if [ ! -L write_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_state.F write_state.F; fi if [ ! -L gsl_ieee_env.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsl_ieee_env.c gsl_ieee_env.c; fi if [ ! -L ptwrapper.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ptwrapper.c ptwrapper.c; fi if [ ! -L setdir.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setdir.c setdir.c; fi if [ ! -L setrlstk.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setrlstk.c setrlstk.c; fi if [ ! -L sigreg.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/sigreg.c sigreg.c; fi if [ ! -L tim.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/tim.c tim.c; fi if [ ! -L timer_stats.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timer_stats.c timer_stats.c; fi if [ ! -L CPP_EEOPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h CPP_EEOPTIONS.h; fi if [ ! -L SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/SIZE.h SIZE.h; fi if [ ! -L DEBUG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/DEBUG_OPTIONS.h DEBUG_OPTIONS.h; fi if [ ! -L DIAGNOSTICS_CALC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_CALC.h DIAGNOSTICS_CALC.h; fi if [ ! -L DIAGNOSTICS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS.h DIAGNOSTICS.h; fi if [ ! -L DIAGNOSTICS_SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_SIZE.h DIAGNOSTICS_SIZE.h; fi if [ ! -L DIAG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAG_OPTIONS.h DIAG_OPTIONS.h; fi if [ ! -L DIAGSTATS_REGIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGSTATS_REGIONS.h DIAGSTATS_REGIONS.h; fi if [ ! -L gad_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev1_dir.h gad_ad_check_lev1_dir.h; fi if [ ! -L gad_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev2_dir.h gad_ad_check_lev2_dir.h; fi if [ ! -L gad_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev3_dir.h gad_ad_check_lev3_dir.h; fi if [ ! -L gad_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev4_dir.h gad_ad_check_lev4_dir.h; fi if [ ! -L GAD_FLUX_LIMITER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_FLUX_LIMITER.h GAD_FLUX_LIMITER.h; fi if [ ! -L GAD.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD.h GAD.h; fi if [ ! -L GAD_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_OPTIONS.h GAD_OPTIONS.h; fi if [ ! -L GAD_SOM_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_SOM_VARS.h GAD_SOM_VARS.h; fi if [ ! -L MDSIO_BUFF_3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_3D.h MDSIO_BUFF_3D.h; fi if [ ! -L MDSIO_BUFF_WH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_WH.h MDSIO_BUFF_WH.h; fi if [ ! -L MDSIO_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_OPTIONS.h MDSIO_OPTIONS.h; fi if [ ! -L MOM_COMMON_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_COMMON_OPTIONS.h MOM_COMMON_OPTIONS.h; fi if [ ! -L MOM_VISC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_VISC.h MOM_VISC.h; fi if [ ! -L MOM_FLUXFORM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM.h MOM_FLUXFORM.h; fi if [ ! -L MOM_FLUXFORM_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MOM_FLUXFORM_OPTIONS.h; fi if [ ! -L MOM_VECINV_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MOM_VECINV_OPTIONS.h; fi if [ ! -L MONITOR.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR.h MONITOR.h; fi if [ ! -L MONITOR_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR_OPTIONS.h MONITOR_OPTIONS.h; fi if [ ! -L obcs_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev1_dir.h obcs_ad_check_lev1_dir.h; fi if [ ! -L obcs_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev2_dir.h obcs_ad_check_lev2_dir.h; fi if [ ! -L obcs_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev3_dir.h obcs_ad_check_lev3_dir.h; fi if [ ! -L obcs_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev4_dir.h obcs_ad_check_lev4_dir.h; fi if [ ! -L OBCS_FIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_FIELDS.h OBCS_FIELDS.h; fi if [ ! -L OBCS_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_GRID.h OBCS_GRID.h; fi if [ ! -L OBCS_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_OPTIONS.h OBCS_OPTIONS.h; fi if [ ! -L OBCS_PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PARAMS.h OBCS_PARAMS.h; fi if [ ! -L OBCS_PTRACERS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PTRACERS.h OBCS_PTRACERS.h; fi if [ ! -L OBCS_SEAICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_SEAICE.h OBCS_SEAICE.h; fi if [ ! -L ORLANSKI.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/ORLANSKI.h ORLANSKI.h; fi if [ ! -L RW_MFLDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_MFLDS.h RW_MFLDS.h; fi if [ ! -L RW_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_OPTIONS.h RW_OPTIONS.h; fi if [ ! -L shelfice_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev1_dir.h shelfice_ad_check_lev1_dir.h; fi if [ ! -L shelfice_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev2_dir.h shelfice_ad_check_lev2_dir.h; fi if [ ! -L shelfice_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev3_dir.h shelfice_ad_check_lev3_dir.h; fi if [ ! -L shelfice_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev4_dir.h shelfice_ad_check_lev4_dir.h; fi if [ ! -L SHELFICE_COST.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_COST.h SHELFICE_COST.h; fi if [ ! -L SHELFICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE.h SHELFICE.h; fi if [ ! -L SHELFICE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_OPTIONS.h SHELFICE_OPTIONS.h; fi if [ ! -L SHELFICE_TAVE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_TAVE.h SHELFICE_TAVE.h; fi if [ ! -L TIMEAVE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_OPTIONS.h TIMEAVE_OPTIONS.h; fi if [ ! -L TIMEAVE_STATV.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_STATV.h TIMEAVE_STATV.h; fi if [ ! -L cmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_c.h cmumps_c.h; fi if [ ! -L cmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_root.h cmumps_root.h; fi if [ ! -L cmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_struc.h cmumps_struc.h; fi if [ ! -L dmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_c.h dmumps_c.h; fi if [ ! -L dmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_root.h dmumps_root.h; fi if [ ! -L dmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_struc.h dmumps_struc.h; fi if [ ! -L gklib_defs.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_defs.h gklib_defs.h; fi if [ ! -L gklib_rename.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_rename.h gklib_rename.h; fi if [ ! -L gklib_tls.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_tls.h gklib_tls.h; fi if [ ! -L metis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/metis.h metis.h; fi if [ ! -L mpicxx.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpicxx.h mpicxx.h; fi if [ ! -L mpif.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpif.h mpif.h; fi if [ ! -L mpi.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi.h mpi.h; fi if [ ! -L mpiof.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpiof.h mpiof.h; fi if [ ! -L mpio.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpio.h mpio.h; fi if [ ! -L mpi_proto.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi_proto.h mpi_proto.h; fi if [ ! -L mumps_compat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_compat.h mumps_compat.h; fi if [ ! -L mumps_c_types.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_c_types.h mumps_c_types.h; fi if [ ! -L mumps_int_def.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_int_def.h mumps_int_def.h; fi if [ ! -L parmetis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/parmetis.h parmetis.h; fi if [ ! -L petscao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscao.h petscao.h; fi if [ ! -L petscbag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbag.h petscbag.h; fi if [ ! -L petscblaslapack.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack.h petscblaslapack.h; fi if [ ! -L petscblaslapack_mangle.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack_mangle.h petscblaslapack_mangle.h; fi if [ ! -L petscbt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbt.h petscbt.h; fi if [ ! -L petsccharacteristic.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccharacteristic.h petsccharacteristic.h; fi if [ ! -L petscconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf.h petscconf.h; fi if [ ! -L petscconfiginfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconfiginfo.h petscconfiginfo.h; fi if [ ! -L petscconf_poison.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf_poison.h petscconf_poison.h; fi if [ ! -L petscconvest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconvest.h petscconvest.h; fi if [ ! -L petscctable.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscctable.h petscctable.h; fi if [ ! -L petsccxxcomplexfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccxxcomplexfix.h petsccxxcomplexfix.h; fi if [ ! -L petscdevice_cuda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cuda.h petscdevice_cuda.h; fi if [ ! -L petscdevice_cupm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cupm.h petscdevice_cupm.h; fi if [ ! -L petscdevice.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice.h petscdevice.h; fi if [ ! -L petscdevice_hip.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_hip.h petscdevice_hip.h; fi if [ ! -L petscdevicetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevicetypes.h petscdevicetypes.h; fi if [ ! -L petscdmadaptor.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptor.h petscdmadaptor.h; fi if [ ! -L petscdmceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmceed.h petscdmceed.h; fi if [ ! -L petscdmcomposite.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmcomposite.h petscdmcomposite.h; fi if [ ! -L petscdmda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmda.h petscdmda.h; fi if [ ! -L petscdmdatypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmdatypes.h petscdmdatypes.h; fi if [ ! -L petscdmfield.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmfield.h petscdmfield.h; fi if [ ! -L petscdmforest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmforest.h petscdmforest.h; fi if [ ! -L petscdm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdm.h petscdm.h; fi if [ ! -L petscdmlabelephemeral.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabelephemeral.h petscdmlabelephemeral.h; fi if [ ! -L petscdmlabel.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabel.h petscdmlabel.h; fi if [ ! -L petscdmmoab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmmoab.h petscdmmoab.h; fi if [ ! -L petscdmnetwork.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmnetwork.h petscdmnetwork.h; fi if [ ! -L petscdmpatch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmpatch.h petscdmpatch.h; fi if [ ! -L petscdmplexceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexceed.h petscdmplexceed.h; fi if [ ! -L petscdmplex.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplex.h petscdmplex.h; fi if [ ! -L petscdmplextransform.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransform.h petscdmplextransform.h; fi if [ ! -L petscdmplextransformtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransformtypes.h petscdmplextransformtypes.h; fi if [ ! -L petscdmplextypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextypes.h petscdmplextypes.h; fi if [ ! -L petscdmproduct.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmproduct.h petscdmproduct.h; fi if [ ! -L petscdmredundant.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmredundant.h petscdmredundant.h; fi if [ ! -L petscdmshell.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmshell.h petscdmshell.h; fi if [ ! -L petscdmsliced.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmsliced.h petscdmsliced.h; fi if [ ! -L petscdmstag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmstag.h petscdmstag.h; fi if [ ! -L petscdmswarm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmswarm.h petscdmswarm.h; fi if [ ! -L petscdmtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmtypes.h petscdmtypes.h; fi if [ ! -L petscdraw.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdraw.h petscdraw.h; fi if [ ! -L petscdrawtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdrawtypes.h petscdrawtypes.h; fi if [ ! -L petscds.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscds.h petscds.h; fi if [ ! -L petscdstypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdstypes.h petscdstypes.h; fi if [ ! -L petscdt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdt.h petscdt.h; fi if [ ! -L petscdualspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdualspace.h petscdualspace.h; fi if [ ! -L petscerror.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscerror.h petscerror.h; fi if [ ! -L petscfeceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfeceed.h petscfeceed.h; fi if [ ! -L petscfe.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfe.h petscfe.h; fi if [ ! -L petscfetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfetypes.h petscfetypes.h; fi if [ ! -L petscfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfix.h petscfix.h; fi if [ ! -L petscfvceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvceed.h petscfvceed.h; fi if [ ! -L petscfv.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfv.h petscfv.h; fi if [ ! -L petscfvtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvtypes.h petscfvtypes.h; fi if [ ! -L petsc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsc.h petsc.h; fi if [ ! -L petscis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscis.h petscis.h; fi if [ ! -L petscistypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscistypes.h petscistypes.h; fi if [ ! -L petscksp.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscksp.h petscksp.h; fi if [ ! -L petsclandau.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclandau.h petsclandau.h; fi if [ ! -L petsclayouthdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclayouthdf5.h petsclayouthdf5.h; fi if [ ! -L petsclogdeprecated.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogdeprecated.h petsclogdeprecated.h; fi if [ ! -L petsclog.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclog.h petsclog.h; fi if [ ! -L petsclogtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogtypes.h petsclogtypes.h; fi if [ ! -L petscmachineinfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmachineinfo.h petscmachineinfo.h; fi if [ ! -L petscmacros.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmacros.h petscmacros.h; fi if [ ! -L petscmatcoarsen.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatcoarsen.h petscmatcoarsen.h; fi if [ ! -L petscmatelemental.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatelemental.h petscmatelemental.h; fi if [ ! -L petscmat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmat.h petscmat.h; fi if [ ! -L petscmath.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmath.h petscmath.h; fi if [ ! -L petscmathtool.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathtool.h petscmathtool.h; fi if [ ! -L petscmathypre.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathypre.h petscmathypre.h; fi if [ ! -L petscmatlab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatlab.h petscmatlab.h; fi if [ ! -L petscoptions.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscoptions.h petscoptions.h; fi if [ ! -L petscpartitioner.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpartitioner.h petscpartitioner.h; fi if [ ! -L petscpc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpc.h petscpc.h; fi if [ ! -L petscpctypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpctypes.h petscpctypes.h; fi if [ ! -L petscpf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpf.h petscpf.h; fi if [ ! -L petscpkg_version.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpkg_version.h petscpkg_version.h; fi if [ ! -L petscsection.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsection.h petscsection.h; fi if [ ! -L petscsectiontypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsectiontypes.h petscsectiontypes.h; fi if [ ! -L petscsf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsf.h petscsf.h; fi if [ ! -L petscsftypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsftypes.h petscsftypes.h; fi if [ ! -L petscsnes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnes.h petscsnes.h; fi if [ ! -L petscspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscspace.h petscspace.h; fi if [ ! -L petscstring.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscstring.h petscstring.h; fi if [ ! -L petscsys.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsys.h petscsys.h; fi if [ ! -L petscsystypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsystypes.h petscsystypes.h; fi if [ ! -L petsctao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao.h petsctao.h; fi if [ ! -L petsctaolinesearch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctaolinesearch.h petsctaolinesearch.h; fi if [ ! -L petsctime.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctime.h petsctime.h; fi if [ ! -L petscts.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscts.h petscts.h; fi if [ ! -L petscvec.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscvec.h petscvec.h; fi if [ ! -L petscversion.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscversion.h petscversion.h; fi if [ ! -L petscviennacl.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviennacl.h petscviennacl.h; fi if [ ! -L petscviewerexodusii.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerexodusii.h petscviewerexodusii.h; fi if [ ! -L petscviewer.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewer.h petscviewer.h; fi if [ ! -L petscviewerhdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerhdf5.h petscviewerhdf5.h; fi if [ ! -L petscviewersaws.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewersaws.h petscviewersaws.h; fi if [ ! -L petscviewertypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewertypes.h petscviewertypes.h; fi if [ ! -L petscwebclient.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscwebclient.h petscwebclient.h; fi if [ ! -L smumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_c.h smumps_c.h; fi if [ ! -L smumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_root.h smumps_root.h; fi if [ ! -L smumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_struc.h smumps_struc.h; fi if [ ! -L zconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zconf.h zconf.h; fi if [ ! -L zlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zlib.h zlib.h; fi if [ ! -L zmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_c.h zmumps_c.h; fi if [ ! -L zmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_root.h zmumps_root.h; fi if [ ! -L zmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_struc.h zmumps_struc.h; fi if [ ! -L BAR2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BAR2.h BAR2.h; fi if [ ! -L BARRIER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BARRIER.h BARRIER.h; fi if [ ! -L CPP_EEMACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CPP_EEMACROS.h CPP_EEMACROS.h; fi if [ ! -L CUMULSUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CUMULSUM.h CUMULSUM.h; fi if [ ! -L DEF_IN_MAKEFILE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/DEF_IN_MAKEFILE.h DEF_IN_MAKEFILE.h; fi if [ ! -L EEBUFF_SCPU.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEBUFF_SCPU.h EEBUFF_SCPU.h; fi if [ ! -L EEPARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEPARAMS.h EEPARAMS.h; fi if [ ! -L EESUPPORT.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EESUPPORT.h EESUPPORT.h; fi if [ ! -L EXCH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EXCH.h EXCH.h; fi if [ ! -L GLOBAL_MAX.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_MAX.h GLOBAL_MAX.h; fi if [ ! -L GLOBAL_SUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_SUM.h GLOBAL_SUM.h; fi if [ ! -L MAIN_PDIRECTIVES1.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES1.h MAIN_PDIRECTIVES1.h; fi if [ ! -L MAIN_PDIRECTIVES2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES2.h MAIN_PDIRECTIVES2.h; fi if [ ! -L MPI_INFO.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MPI_INFO.h MPI_INFO.h; fi if [ ! -L SIGREG.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/SIGREG.h SIGREG.h; fi if [ ! -L CG2D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG2D.h CG2D.h; fi if [ ! -L CG3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG3D.h CG3D.h; fi if [ ! -L CPP_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h CPP_OPTIONS.h; fi if [ ! -L DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXC_MACROS.h DXC_MACROS.h; fi if [ ! -L DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXF_MACROS.h DXF_MACROS.h; fi if [ ! -L DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXG_MACROS.h DXG_MACROS.h; fi if [ ! -L DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXV_MACROS.h DXV_MACROS.h; fi if [ ! -L DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYC_MACROS.h DYC_MACROS.h; fi if [ ! -L DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYF_MACROS.h DYF_MACROS.h; fi if [ ! -L DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYG_MACROS.h DYG_MACROS.h; fi if [ ! -L DYNVARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYNVARS.h DYNVARS.h; fi if [ ! -L DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYU_MACROS.h DYU_MACROS.h; fi if [ ! -L EOS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/EOS.h EOS.h; fi if [ ! -L FCORI_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FCORI_MACROS.h FCORI_MACROS.h; fi if [ ! -L FFIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FFIELDS.h FFIELDS.h; fi if [ ! -L GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID.h GRID.h; fi if [ ! -L GRID_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID_MACROS.h GRID_MACROS.h; fi if [ ! -L HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACC_MACROS.h HFACC_MACROS.h; fi if [ ! -L HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACS_MACROS.h HFACS_MACROS.h; fi if [ ! -L HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACW_MACROS.h HFACW_MACROS.h; fi if [ ! -L MASKS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKS_MACROS.h MASKS_MACROS.h; fi if [ ! -L MASKW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKW_MACROS.h MASKW_MACROS.h; fi if [ ! -L NH_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/NH_VARS.h NH_VARS.h; fi if [ ! -L PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/PARAMS.h PARAMS.h; fi if [ ! -L RA_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RA_MACROS.h RA_MACROS.h; fi if [ ! -L RAS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAS_MACROS.h RAS_MACROS.h; fi if [ ! -L RAW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAW_MACROS.h RAW_MACROS.h; fi if [ ! -L RECIP_DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXC_MACROS.h RECIP_DXC_MACROS.h; fi if [ ! -L RECIP_DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXF_MACROS.h RECIP_DXF_MACROS.h; fi if [ ! -L RECIP_DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXG_MACROS.h RECIP_DXG_MACROS.h; fi if [ ! -L RECIP_DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXV_MACROS.h RECIP_DXV_MACROS.h; fi if [ ! -L RECIP_DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYC_MACROS.h RECIP_DYC_MACROS.h; fi if [ ! -L RECIP_DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYF_MACROS.h RECIP_DYF_MACROS.h; fi if [ ! -L RECIP_DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYG_MACROS.h RECIP_DYG_MACROS.h; fi if [ ! -L RECIP_DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYU_MACROS.h RECIP_DYU_MACROS.h; fi if [ ! -L RECIP_HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACC_MACROS.h RECIP_HFACC_MACROS.h; fi if [ ! -L RECIP_HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACS_MACROS.h RECIP_HFACS_MACROS.h; fi if [ ! -L RECIP_HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACW_MACROS.h RECIP_HFACW_MACROS.h; fi if [ ! -L RESTART.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RESTART.h RESTART.h; fi if [ ! -L SET_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SET_GRID.h SET_GRID.h; fi if [ ! -L SOLVE_FOR_PRESSURE3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE3D.h SOLVE_FOR_PRESSURE3D.h; fi if [ ! -L SOLVE_FOR_PRESSURE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE.h SOLVE_FOR_PRESSURE.h; fi if [ ! -L SURFACE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SURFACE.h SURFACE.h; fi if [ ! -L TANPHIATU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATU_MACROS.h TANPHIATU_MACROS.h; fi if [ ! -L TANPHIATV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATV_MACROS.h TANPHIATV_MACROS.h; fi if [ ! -L THE_MODEL_COMMON_BLOCKS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/THE_MODEL_COMMON_BLOCKS.h THE_MODEL_COMMON_BLOCKS.h; fi if [ ! -L XC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/XC_MACROS.h XC_MACROS.h; fi if [ ! -L YC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/YC_MACROS.h YC_MACROS.h; fi Creating FC_NAMEMANGLE.h ... echo "#define FC_NAMEMANGLE(X) X ## _" > FC_NAMEMANGLE.h Creating BUILD_INFO.h ... echo "#define THISVER 'checkpoint68i'" > BUILD_INFO.h echo "#define THISUSER 'jenkins'" >> BUILD_INFO.h echo "#define THISDATE 'Thu Sep 12 12:50:46 PM PDT 2024'" >> BUILD_INFO.h echo "#define THISHOST 'Debian-12-VM'" >> BUILD_INFO.h make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build' /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/xmakedepend -f Makefile -o .f -DWORDLENGTH=4 -DNML_TERMINATOR -DALLOW_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_ETIME_SBR -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -DHAVE_FLUSH -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu -I/usr/include cpl_issm.F do_oceanic_phys.F eeboot_minimal.F eedie.F chksum_tiled.F debug_call.F debug_cs_corner_uv.F debug_enter.F debug_fld_stats_rl.F debug_fld_stats_rs.F debug_leave.F debug_msg.F debug_stats_rl.F debug_stats_rs.F fill_in_corners_rl.F write_fullarray_rl.F write_fullarray_rs.F diag_calc_psivel.F diag_cg2d.F diagnostics_addtolist.F diagnostics_calc_phivel.F diagnostics_check.F diagnostics_clear.F diagnostics_fill.F diagnostics_fill_field.F diagnostics_fill_rs.F diagnostics_fill_state.F diagnostics_fract_fill.F diagnostics_ini_io.F diagnostics_init_early.F diagnostics_init_fixed.F diagnostics_init_varia.F diagnostics_interp_p2p.F diagnostics_interp_vert.F diagnostics_is_on.F diagnostics_list_check.F diagnostics_main_init.F diagnostics_mnc_out.F diagnostics_out.F diagnostics_readparms.F diagnostics_read_pickup.F diagnostics_scale_fill.F diagnostics_scale_fill_rs.F diagnostics_set_calc.F diagnostics_setdiag.F diagnostics_set_levels.F diagnostics_set_pointers.F diagnostics_status_error.F diagnostics_sum_levels.F diagnostics_summary.F diagnostics_switch_onoff.F diagnostics_utils.F diagnostics_write_adj.F diagnostics_write.F diagnostics_write_pickup.F diagstats_ascii_out.F diagstats_calc.F diagstats_clear.F diagstats_close_io.F diagstats_fill.F diagstats_global.F diagstats_ini_io.F diagstats_local.F diagstats_mnc_out.F diagstats_others_calc.F diagstats_output.F diagstats_setdiag.F diagstats_set_pointers.F diagstats_set_regions.F diag_vegtile_fill.F gad_advection.F gad_advscheme.F gad_biharm_r.F gad_biharm_x.F gad_biharm_y.F gad_c2_adv_r.F gad_c2_adv_x.F gad_c2_adv_y.F gad_c2_impl_r.F gad_c4_adv_r.F gad_c4_adv_x.F gad_c4_adv_y.F gad_calc_rhs.F gad_check.F gad_del2.F gad_diagnostics_init.F gad_diagnostics_state.F gad_diff_r.F gad_diff_x.F gad_diff_y.F gad_dst2u1_adv_r.F gad_dst2u1_adv_x.F gad_dst2u1_adv_y.F gad_dst2u1_impl_r.F gad_dst3_adv_r.F gad_dst3_adv_x.F gad_dst3_adv_y.F gad_dst3fl_adv_r.F gad_dst3fl_adv_x.F gad_dst3fl_adv_y.F gad_dst3fl_impl_r.F gad_exch_som.F gad_fluxlimit_adv_r.F gad_fluxlimit_adv_x.F gad_fluxlimit_adv_y.F gad_fluxlimit_impl_r.F gad_grad_x.F gad_grad_y.F gad_implicit_r.F gad_init_fixed.F gad_init_varia.F gad_os7mp_adv_r.F gad_os7mp_adv_x.F gad_os7mp_adv_y.F gad_osc_hat_r.F gad_osc_hat_x.F gad_osc_hat_y.F gad_osc_mul_r.F gad_osc_mul_x.F gad_osc_mul_y.F gad_plm_fun.F gad_ppm_adv_r.F gad_ppm_adv_x.F gad_ppm_adv_y.F gad_ppm_flx_r.F gad_ppm_flx_x.F gad_ppm_flx_y.F gad_ppm_fun.F gad_ppm_hat_r.F gad_ppm_hat_x.F gad_ppm_hat_y.F gad_ppm_p3e_r.F gad_ppm_p3e_x.F gad_ppm_p3e_y.F gad_pqm_adv_r.F gad_pqm_adv_x.F gad_pqm_adv_y.F gad_pqm_flx_r.F gad_pqm_flx_x.F gad_pqm_flx_y.F gad_pqm_fun.F gad_pqm_hat_r.F gad_pqm_hat_x.F gad_pqm_hat_y.F gad_pqm_p5e_r.F gad_pqm_p5e_x.F gad_pqm_p5e_y.F gad_read_pickup.F gad_som_advect.F gad_som_adv_r.F gad_som_adv_x.F gad_som_adv_y.F gad_som_exchanges.F gad_som_fill_cs_corner.F gad_som_lim_r.F gad_som_prep_cs_corner.F gad_u3_adv_r.F gad_u3_adv_x.F gad_u3_adv_y.F gad_u3c4_impl_r.F gad_write_pickup.F salt_fill.F mdsio_buffertorl.F mdsio_buffertors.F mdsio_check4file.F mdsio_facef_read.F mdsio_gl.F mdsio_gl_slice.F mdsio_pass_r4torl.F mdsio_pass_r4tors.F mdsio_pass_r8torl.F mdsio_pass_r8tors.F mdsio_rd_rec_rl.F mdsio_rd_rec_rs.F mdsio_read_field.F mdsio_read_meta.F mdsio_read_section.F mdsio_read_tape.F mdsio_readvec_loc.F mdsio_read_whalos.F mdsio_rw_field.F mdsio_rw_slice.F mdsio_seg4torl.F mdsio_seg4tors.F mdsio_seg8torl.F mdsio_seg8tors.F mdsio_segxtorx_2d.F mdsio_write_field.F mdsio_writelocal.F mdsio_write_meta.F mdsio_write_section.F mdsio_write_tape.F mdsio_writevec_loc.F mdsio_write_whalos.F mdsio_wr_metafiles.F mdsio_wr_rec_rl.F mdsio_wr_rec_rs.F mom_calc_3d_strain.F mom_calc_absvort3.F mom_calc_hdiv.F mom_calc_hfacz.F mom_calc_ke.F mom_calc_relvort3.F mom_calc_smag_3d.F mom_calc_strain.F mom_calc_tension.F mom_calc_visc.F mom_diagnostics_init.F mom_hdissip.F mom_init_fixed.F mom_quasihydrostatic.F mom_u_botdrag_coeff.F mom_u_coriolis_nh.F mom_u_implicit_r.F mom_u_metric_nh.F mom_u_rviscflux.F mom_u_sidedrag.F mom_uv_smag_3d.F mom_v_botdrag_coeff.F mom_v_coriolis_nh.F mom_v_implicit_r.F mom_visc_qgl_limit.F mom_visc_qgl_stretch.F mom_v_metric_nh.F mom_v_rviscflux.F mom_v_sidedrag.F mom_w_coriolis_nh.F mom_w_metric_nh.F mom_w_sidedrag.F mom_w_smag_3d.F mom_calc_rtrans.F mom_fluxform.F mom_u_adv_uu.F mom_u_adv_vu.F mom_u_adv_wu.F mom_u_coriolis.F mom_u_del2u.F mom_u_metric_cylinder.F mom_u_metric_sphere.F mom_uv_boundary.F mom_u_xviscflux.F mom_u_yviscflux.F mom_v_adv_uv.F mom_v_adv_vv.F mom_v_adv_wv.F mom_v_coriolis.F mom_v_del2v.F mom_v_metric_cylinder.F mom_v_metric_sphere.F mom_v_xviscflux.F mom_v_yviscflux.F mom_vecinv.F mom_vi_coriolis.F mom_vi_del2uv.F mom_vi_hdissip.F mom_vi_u_coriolis_c4.F mom_vi_u_coriolis.F mom_vi_u_grad_ke.F mom_vi_u_vertshear.F mom_vi_v_coriolis_c4.F mom_vi_v_coriolis.F mom_vi_v_grad_ke.F mom_vi_v_vertshear.F mon_advcfl.F mon_advcflw2.F mon_advcflw.F mon_calc_advcfl.F mon_calc_stats_rl.F mon_calc_stats_rs.F mon_init.F monitor_ad.F monitor.F monitor_g.F mon_ke.F mon_out.F mon_printstats_rl.F mon_printstats_rs.F mon_set_iounit.F mon_set_pref.F mon_solution.F mon_stats_latbnd_rl.F mon_stats_rl.F mon_stats_rs.F mon_surfcor.F mon_vort3.F mon_writestats_rl.F mon_writestats_rs.F obcs_add_tides.F obcs_adjust.F obcs_adjust_uvice.F obcs_apply_eta.F obcs_apply_ptracer.F obcs_apply_r_star.F obcs_apply_seaice.F obcs_apply_surf_dr.F obcs_apply_ts.F obcs_apply_uv.F obcs_apply_uvice.F obcs_apply_w.F obcs_balance_flow.F obcs_calc.F obcs_calc_stevens.F obcs_check_depths.F obcs_check.F obcs_copy_tracer.F obcs_copy_uv_n.F obcs_diag_balance.F obcs_exchanges.F obcs_exf_load.F obcs_fields_load.F obcs_init_fixed.F obcs_init_variables.F obcs_monitor.F obcs_mon_stats.F obcs_output.F obcs_prescribe_read.F obcs_readparms.F obcs_read_pickup.F obcs_save_uv_n.F obcs_seaice_sponge.F obcs_set_connect.F obcs_sponge.F obcs_u1_adv_tracer.F obcs_write_pickup.F orlanski_east.F orlanski_init.F orlanski_north.F orlanski_south.F orlanski_west.F get_write_global_fld.F read_fld_xy_rl.F read_fld_xy_rs.F read_fld_xyz_rl.F read_fld_xyz_rs.F read_glvec_rl.F read_glvec_rs.F read_mflds.F read_rec.F rw_get_suffix.F set_write_global_fld.F write_fld_3d_rl.F write_fld_3d_rs.F write_fld_s3d_rl.F write_fld_s3d_rs.F write_fld_xy_rl.F write_fld_xy_rs.F write_fld_xyz_rl.F write_fld_xyz_rs.F write_glvec_rl.F write_glvec_rs.F write_local_rl.F write_local_rs.F write_rec.F shelfice_check.F shelfice_cost_accumulate.F shelfice_cost_final.F shelfice_cost_shifwflx.F shelfice_diagnostics_drag.F shelfice_forcing.F shelfice_forcing_surf.F shelfice_init_depths.F shelfice_init_fixed.F shelfice_init_varia.F shelfice_mask_seaice.F shelfice_mnc_init.F shelfice_output.F shelfice_readparms.F shelfice_read_pickup.F shelfice_remesh_calc_w.F shelfice_remesh_c_mask.F shelfice_remeshing.F shelfice_remesh_state.F shelfice_remesh_uv_mask.F shelfice_step_icemass.F shelfice_thermodynamics.F shelfice_u_drag_coeff.F shelfice_v_drag_coeff.F shelfice_write_pickup.F timeave_cumul_1k1t.F timeave_cumul_1t.F timeave_cumul_1vfc.F timeave_cumul_2v.F timeave_cumul_2vfc.F timeave_cumulate.F timeave_cumul_dif_1t.F timeave_init_fixed.F timeave_norma_2v.F timeave_normalize.F timeave_reset.F timeave_statvars.F timeave_statv_write.F timeave_surf_flux.F all_proc_die.F bar2.F bar_check.F barrier.F check_threads.F comm_stats.F cumulsum_z_tile.F different_multiple.F diff_phase_multiple.F eeboot.F eedata_example.F eeintro_msg.F eeset_parms.F eewrite_eeenv.F exch0_r4.F exch0_r8.F exch0_rl.F exch0_rs.F exch1_bg_r4_cube.F exch1_bg_r8_cube.F exch1_bg_rl_cube.F exch1_bg_rs_cube.F exch1_r4_cube.F exch1_r4.F exch1_r8_cube.F exch1_r8.F exch1_rl_ad.F exch1_rl_cube_ad.F exch1_rl_cube.F exch1_rl.F exch1_rs_ad.F exch1_rs_cube_ad.F exch1_rs_cube.F exch1_rs.F exch1_uv_r4_cube.F exch1_uv_r8_cube.F exch1_uv_rl_cube.F exch1_uv_rs_cube.F exch1_z_r4_cube.F exch1_z_r8_cube.F exch1_z_rl_cube.F exch1_z_rs_cube.F exch_3d_r4.F exch_3d_r8.F exch_3d_rl.F exch_3d_rs.F exch_cycle_ebl.F exch_init.F exch_r4_recv_get_x.F exch_r4_recv_get_y.F exch_r4_send_put_x.F exch_r4_send_put_y.F exch_r8_recv_get_x.F exch_r8_recv_get_y.F exch_r8_send_put_x.F exch_r8_send_put_y.F exch_rl_recv_get_x.F exch_rl_recv_get_y.F exch_rl_send_put_x.F exch_rl_send_put_y.F exch_rs_recv_get_x.F exch_rs_recv_get_y.F exch_rs_send_put_x.F exch_rs_send_put_y.F exch_s3d_r4.F exch_s3d_r8.F exch_s3d_rl.F exch_s3d_rs.F exch_sm_3d_r4.F exch_sm_3d_r8.F exch_sm_3d_rl.F exch_sm_3d_rs.F exch_uv_3d_r4.F exch_uv_3d_r8.F exch_uv_3d_rl.F exch_uv_3d_rs.F exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rs.F exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rs.F exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rs.F exch_uv_xy_r4.F exch_uv_xy_r8.F exch_uv_xy_rl.F exch_uv_xy_rs.F exch_uv_xyz_r4.F exch_uv_xyz_r8.F exch_uv_xyz_rl.F exch_uv_xyz_rs.F exch_xy_r4.F exch_xy_r8.F exch_xy_rl.F exch_xy_rs.F exch_xyz_r4.F exch_xyz_r8.F exch_xyz_rl.F exch_xyz_rs.F exch_z_3d_r4.F exch_z_3d_r8.F exch_z_3d_rl.F exch_z_3d_rs.F fill_cs_corner_ag_rl.F fill_cs_corner_tr_rl.F fill_cs_corner_uv_rl.F fill_cs_corner_uv_rs.F fool_the_compiler.F gather_2d_r4.F gather_2d_r8.F gather_2d_wh_r4.F gather_2d_wh_r8.F gather_vec_r4.F gather_vec_r8.F gather_xz.F gather_yz.F get_periodic_interval.F global_max.F global_sum.F global_sum_singlecpu.F global_sum_tile.F global_vec_sum.F gsum.F ini_communication_patterns.F ini_procs.F ini_threading_environment.F lef_zero.F main.F master_cpu_io.F master_cpu_thread.F mds_byteswapi4.F mds_byteswapr4.F mds_byteswapr8.F mdsfindunit.F mds_flush.F mds_reclen.F memsync.F nml_change_syntax.F nml_set_terminator.F open_copy_data_file.F print.F reset_halo.F scatter_2d_r4.F scatter_2d_r8.F scatter_2d_wh_r4.F scatter_2d_wh_r8.F scatter_vec_r4.F scatter_vec_r8.F scatter_xz.F scatter_yz.F stop_if_error.F timers.F utils.F write_utils.F adams_bashforth2.F adams_bashforth3.F add_walls2masks.F apply_forcing.F calc_3d_diffusivity.F calc_adv_flow.F calc_div_ghat.F calc_eddy_stress.F calc_grad_phi_fv.F calc_grad_phi_hyd.F calc_grad_phi_surf.F calc_grid_angles.F calc_gw.F calc_ivdc.F calc_oce_mxlayer.F calc_phi_hyd.F calc_r_star.F calc_surf_dr.F calc_viscosity.F calc_wsurf_tr.F cg2d_ex0.F cg2d.F cg2d_nsa.F cg2d_sr.F cg3d_ex0.F cg3d.F check_pickup.F config_check.F config_summary.F convective_adjustment.F convective_adjustment_ini.F convectively_mixtracer.F convective_weights.F correction_step.F cycle_ab_tracer.F cycle_tracer.F diags_oceanic_surf_flux.F diags_phi_hyd.F diags_phi_rlow.F diags_rho.F diags_sound_speed.F do_atmospheric_phys.F do_fields_blocking_exchanges.F do_stagger_fields_exchanges.F do_statevars_diags.F do_statevars_tave.F do_the_model_io.F do_write_pickup.F dynamics.F external_fields_load.F external_forcing.F external_forcing_surf.F find_alpha.F find_hyd_press_1d.F find_rho.F forcing_surf_relax.F forward_step.F freesurf_rescale_g.F freeze_surface.F grad_sigma.F gsw_teos10.F impldiff.F ini_cartesian_grid.F ini_cg2d.F ini_cg3d.F ini_cori.F ini_curvilinear_grid.F ini_cylinder_grid.F ini_depths.F ini_dynvars.F ini_eos.F ini_ffields.F ini_fields.F ini_forcing.F ini_global_domain.F ini_grid.F ini_linear_phisurf.F ini_local_grid.F ini_masks_etc.F ini_mixing.F ini_mnc_vars.F ini_model_io.F ini_nh_fields.F ini_nh_vars.F ini_nlfs_vars.F ini_parms.F ini_p_ground.F ini_pressure.F ini_psurf.F ini_salt.F ini_sigma_hfac.F ini_spherical_polar_grid.F ini_theta.F initialise_fixed.F initialise_varia.F ini_vel.F ini_vertical_grid.F integrate_for_w.F integr_continuity.F load_fields_driver.F load_grid_spacing.F load_ref_files.F main_do_loop.F momentum_correction_step.F packages_boot.F packages_check.F packages_error_msg.F packages_init_fixed.F packages_init_variables.F packages_print_msg.F packages_readparms.F packages_unused_msg.F packages_write_pickup.F plot_field.F port_rand.F post_cg3d.F pre_cg3d.F pressure_for_eos.F read_pickup.F remove_mean.F reset_nlfs_vars.F rotate_spherical_polar_grid.F rotate_uv2en.F salt_integrate.F seawater.F set_defaults.F set_grid_factors.F set_parms.F set_ref_state.F solve_for_pressure.F solve_pentadiagonal.F solve_tridiagonal.F solve_uv_tridiago.F state_summary.F swfrac.F taueddy_init_varia.F taueddy_tendency_apply.F temp_integrate.F the_main_loop.F the_model_main.F thermodynamics.F timestep.F timestep_tracer.F timestep_wvel.F tracers_correction_step.F tracers_iigw_correction.F turnoff_model_io.F update_cg2d.F update_etah.F update_etaws.F update_masks_etc.F update_r_star.F update_sigma.F update_surf_dr.F write_grid.F write_pickup.F write_state.F Appending dependencies to Makefile /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/f90mkdepend >> Makefile WARNING: f90mkdepend: no source file found for module `petscdtbinomial()` WARNING: f90mkdepend: no source file found for module `seterra()` WARNING: f90mkdepend: no source file found for module `seterra()` WARNING: f90mkdepend: no source file found for module `petsccalla()`. WARNING: f90mkdepend: no source file found for module `chkmema` WARNING: f90mkdepend: no source file found for module `petscstackpushexternal()` WARNING: f90mkdepend: no source file found for module `petscfunctionbeginuser` WARNING: f90mkdepend: no source file found for module this WARNING: f90mkdepend: no source file found for module `petscobjectoptionsbegin()` WARNING: f90mkdepend: no source file found for module `petsc_null_integer` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module the WARNING: f90mkdepend: no source file found for module `petscclassidregister()` WARNING: f90mkdepend: no source file found for module `petsccount_fmt` WARNING: f90mkdepend: no source file found for module of WARNING: f90mkdepend: no source file found for module `petscviewerfilesetmode()` rm -f makedepend.out [41;37m step #6: RunUncoupledMITgcm [0m Year: 0 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.083333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.16667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.25 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.33333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.41667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.5 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.58333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.66667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.75 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.83333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.91667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 1 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END [41;37m step #7: CreateMesh [0m Info: creating coordinates in polar stereographic (Std Latitude: 71S Meridian: 0) saving model as: Models/IceOcean.CreateMesh [41;37m step #8: MeshGeometry [0m saving model as: Models/IceOcean.MeshGeometry [41;37m step #9: ParameterizeIce [0m saving model as: Models/IceOcean.ParameterizeIce [41;37m step #10: RunUncoupledISSM [0m checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/12 time [yr]: 0.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 2/12 time [yr]: 0.17 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 3/12 time [yr]: 0.25 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 4/12 time [yr]: 0.33 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 5/12 time [yr]: 0.42 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 6/12 time [yr]: 0.50 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 7/12 time [yr]: 0.58 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 8/12 time [yr]: 0.67 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 9/12 time [yr]: 0.75 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 10/12 time [yr]: 0.83 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 11/12 time [yr]: 0.92 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 12/12 time [yr]: 1.00 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0941359 Total Core solution elapsed time: 3.13947 Linear solver elapsed time: 1.98447 (63%) Total elapsed time: 0 hrs 0 min 3 sec loading results from cluster saving model as: Models/IceOcean.RunUncoupledISSM [41;37m step #11: RunCoupledMITgcmISSM [0m Year: 0 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0460529 Total Core solution elapsed time: 0.573313 Linear solver elapsed time: 0.390745 (68%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.083333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.17 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0691329 Total Core solution elapsed time: 0.38811 Linear solver elapsed time: 0.230474 (59%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.16667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.25 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0792389 Total Core solution elapsed time: 0.391897 Linear solver elapsed time: 0.240358 (61%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.25 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.33 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0431134 Total Core solution elapsed time: 0.298402 Linear solver elapsed time: 0.186602 (63%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.33333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.42 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0485201 Total Core solution elapsed time: 0.305649 Linear solver elapsed time: 0.191515 (63%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.41667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.50 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0483121 Total Core solution elapsed time: 0.306386 Linear solver elapsed time: 0.178801 (58%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.5 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.58 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0456 Total Core solution elapsed time: 0.372944 Linear solver elapsed time: 0.213262 (57%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.58333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/2 time [yr]: 0.67 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0487121 Total Core solution elapsed time: 0.319031 Linear solver elapsed time: 0.189667 (59%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.66667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.75 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0523603 Total Core solution elapsed time: 0.332599 Linear solver elapsed time: 0.19587 (59%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.75 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.83 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0387228 Total Core solution elapsed time: 0.261444 Linear solver elapsed time: 0.160955 (62%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.83333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/2 time [yr]: 0.92 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0340632 Total Core solution elapsed time: 0.236705 Linear solver elapsed time: 0.150585 (64%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.91667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 1.00 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0352029 Total Core solution elapsed time: 0.297539 Linear solver elapsed time: 0.18309 (62%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 1 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 1.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0563632 Total Core solution elapsed time: 0.312737 Linear solver elapsed time: 0.208848 (67%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster saving model as: Models/IceOcean.RunCoupledMITgcmISSM SUCCESS difference: 0 < 2e-13 test id: 4001 test name: IceOcean field: Base1 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: Melting1 SUCCESS difference: 9.7e-15 < 8e-06 test id: 4001 test name: IceOcean field: Vx2 SUCCESS difference: 1.5e-14 < 7e-06 test id: 4001 test name: IceOcean field: Vy2 SUCCESS difference: 9.9e-16 < 2e-07 test id: 4001 test name: IceOcean field: Thickness2 SUCCESS difference: 2.5e-16 < 2e-08 test id: 4001 test name: IceOcean field: Base2 SUCCESS difference: 3.4e-16 < 3e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset2 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate2 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: Melting2 SUCCESS difference: 1.2e-14 < 8e-06 test id: 4001 test name: IceOcean field: Vx3 SUCCESS difference: 1.9e-14 < 7e-06 test id: 4001 test name: IceOcean field: Vy3 SUCCESS difference: 1.7e-15 < 4e-07 test id: 4001 test name: IceOcean field: Thickness3 SUCCESS difference: 3.9e-16 < 3e-08 test id: 4001 test name: IceOcean field: Base3 SUCCESS difference: 3.4e-16 < 5e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset3 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate3 SUCCESS difference: 0 < 6e-08 test id: 4001 test name: IceOcean field: Melting3 SUCCESS difference: 1.1e-14 < 8e-06 test id: 4001 test name: IceOcean field: Vx4 SUCCESS difference: 2.4e-14 < 7e-06 test id: 4001 test name: IceOcean field: Vy4 SUCCESS difference: 2.2e-15 < 5e-07 test id: 4001 test name: IceOcean field: Thickness4 SUCCESS difference: 5.3e-16 < 4e-08 test id: 4001 test name: IceOcean field: Base4 SUCCESS difference: 3.4e-16 < 8e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset4 SUCCESS difference: 0 < 6e-08 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate4 SUCCESS difference: 0 < 3e-07 test id: 4001 test name: IceOcean field: Melting4 +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-4001 +++ working dir: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/nightlylog [41;37m step #1: Parameters [0m saving data in: Models/IceOcean.Parameters [41;37m step #2: Bathymetry [0m saving data in: Models/IceOcean.Bathymetry [41;37m step #3: IceSheetGeometry [0m saving data in: Models/IceOcean.IceSheetGeometry [41;37m step #4: GetMITgcm [0m --2024-09-12 12:50:31-- https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz Resolving github.com (github.com)... 140.82.116.3 Connecting to github.com (github.com)|140.82.116.3|:443... connected. HTTP request sent, awaiting response... 302 Found Location: https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i [following] --2024-09-12 12:50:31-- https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i Resolving codeload.github.com (codeload.github.com)... 140.82.116.10 Connecting to codeload.github.com (codeload.github.com)|140.82.116.10|:443... connected. HTTP request sent, awaiting response... 200 OK Length: unspecified [application/x-gzip] Saving to: checkpoint68i.tar.gz checkpoint68i.tar.g [<=> ] 0 --.-KB/s checkpoint68i.tar.g [ <=> ] 861.48K 3.66MB/s checkpoint68i.tar.g [ <=> ] 6.53M 15.2MB/s checkpoint68i.tar.g [ <=> ] 13.18M 20.9MB/s checkpoint68i.tar.g [ <=> ] 19.25M 23.2MB/s checkpoint68i.tar.g [ <=> ] 25.23M 24.5MB/s checkpoint68i.tar.g [ <=> ] 30.07M 24.5MB/s checkpoint68i.tar.g [ <=> ] 34.69M 24.2MB/s checkpoint68i.tar.g [ <=> ] 39.11M 23.9MB/s checkpoint68i.tar.g [ <=> ] 42.31M 23.0MB/s checkpoint68i.tar.g [ <=> ] 44.78M 22.0MB/s checkpoint68i.tar.g [ <=> ] 46.25M 20.6MB/s checkpoint68i.tar.g [ <=> ] 48.20M 19.7MB/s checkpoint68i.tar.g [ <=> ] 50.27M 19.0MB/s checkpoint68i.tar.g [ <=> ] 52.41M 18.4MB/s checkpoint68i.tar.g [ <=> ] 56.11M 18.4MB/s checkpoint68i.tar.g [ <=> ] 58.33M 18.6MB/s checkpoint68i.tar.g [ <=>] 61.38M 18.6MB/s checkpoint68i.tar.g [ <=> ] 63.78M 17.5MB/s checkpoint68i.tar.g [ <=> ] 66.84M 16.7MB/s 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MITgcm-checkpoint68i/eesupp/src/exch1_rx.template MITgcm-checkpoint68i/eesupp/src/exch1_rx_ad.template MITgcm-checkpoint68i/eesupp/src/exch1_rx_cube.template MITgcm-checkpoint68i/eesupp/src/exch1_rx_cube_ad.template MITgcm-checkpoint68i/eesupp/src/exch1_uv_rx_cube.template MITgcm-checkpoint68i/eesupp/src/exch1_z_rx_cube.template MITgcm-checkpoint68i/eesupp/src/exch_3d_rx.template MITgcm-checkpoint68i/eesupp/src/exch_ad_diff.list MITgcm-checkpoint68i/eesupp/src/exch_cycle_ebl.F MITgcm-checkpoint68i/eesupp/src/exch_init.F MITgcm-checkpoint68i/eesupp/src/exch_rx_recv_get_x.template MITgcm-checkpoint68i/eesupp/src/exch_rx_recv_get_y.template MITgcm-checkpoint68i/eesupp/src/exch_rx_send_put_x.template MITgcm-checkpoint68i/eesupp/src/exch_rx_send_put_y.template MITgcm-checkpoint68i/eesupp/src/exch_s3d_rx.template MITgcm-checkpoint68i/eesupp/src/exch_sm_3d_rx.template MITgcm-checkpoint68i/eesupp/src/exch_uv_3d_rx.template MITgcm-checkpoint68i/eesupp/src/exch_uv_agrid_3d_rx.template MITgcm-checkpoint68i/eesupp/src/exch_uv_bgrid_3d_rx.template MITgcm-checkpoint68i/eesupp/src/exch_uv_dgrid_3d_rx.template MITgcm-checkpoint68i/eesupp/src/exch_uv_xy_rx.template MITgcm-checkpoint68i/eesupp/src/exch_uv_xyz_rx.template MITgcm-checkpoint68i/eesupp/src/exch_xy_rx.template MITgcm-checkpoint68i/eesupp/src/exch_xyz_rx.template MITgcm-checkpoint68i/eesupp/src/exch_z_3d_rx.template MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_ag_rl.F MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_tr_rl.F MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_uv_rl.F MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_uv_rs.F MITgcm-checkpoint68i/eesupp/src/fool_the_compiler.F MITgcm-checkpoint68i/eesupp/src/gather_2d_rx.template MITgcm-checkpoint68i/eesupp/src/gather_2d_wh_rx.template MITgcm-checkpoint68i/eesupp/src/gather_vec_rx.template MITgcm-checkpoint68i/eesupp/src/gather_xz.F MITgcm-checkpoint68i/eesupp/src/gather_yz.F MITgcm-checkpoint68i/eesupp/src/get_periodic_interval.F 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MITgcm-checkpoint68i/model/src/set_ref_state.F MITgcm-checkpoint68i/model/src/solve_for_pressure.F MITgcm-checkpoint68i/model/src/solve_pentadiagonal.F MITgcm-checkpoint68i/model/src/solve_tridiagonal.F MITgcm-checkpoint68i/model/src/solve_uv_tridiago.F MITgcm-checkpoint68i/model/src/state_summary.F MITgcm-checkpoint68i/model/src/swfrac.F MITgcm-checkpoint68i/model/src/taueddy_init_varia.F MITgcm-checkpoint68i/model/src/taueddy_tendency_apply.F MITgcm-checkpoint68i/model/src/temp_integrate.F MITgcm-checkpoint68i/model/src/the_main_loop.F MITgcm-checkpoint68i/model/src/the_model_main.F MITgcm-checkpoint68i/model/src/thermodynamics.F MITgcm-checkpoint68i/model/src/timestep.F MITgcm-checkpoint68i/model/src/timestep_tracer.F MITgcm-checkpoint68i/model/src/timestep_wvel.F MITgcm-checkpoint68i/model/src/tracers_correction_step.F MITgcm-checkpoint68i/model/src/tracers_iigw_correction.F MITgcm-checkpoint68i/model/src/turnoff_model_io.F MITgcm-checkpoint68i/model/src/update_cg2d.F MITgcm-checkpoint68i/model/src/update_etah.F MITgcm-checkpoint68i/model/src/update_etaws.F MITgcm-checkpoint68i/model/src/update_masks_etc.F MITgcm-checkpoint68i/model/src/update_r_star.F MITgcm-checkpoint68i/model/src/update_sigma.F MITgcm-checkpoint68i/model/src/update_surf_dr.F MITgcm-checkpoint68i/model/src/write_grid.F MITgcm-checkpoint68i/model/src/write_pickup.F MITgcm-checkpoint68i/model/src/write_state.F MITgcm-checkpoint68i/optim/ MITgcm-checkpoint68i/optim/Makefile MITgcm-checkpoint68i/optim/Makefile_macosx MITgcm-checkpoint68i/optim/README.md MITgcm-checkpoint68i/optim/blas1.h MITgcm-checkpoint68i/optim/data.ctrl MITgcm-checkpoint68i/optim/data.ecco MITgcm-checkpoint68i/optim/data.optim MITgcm-checkpoint68i/optim/flowchart_optim.txt MITgcm-checkpoint68i/optim/minimization.h MITgcm-checkpoint68i/optim/optim.h MITgcm-checkpoint68i/optim/optim_initmod.F MITgcm-checkpoint68i/optim/optim_main.F MITgcm-checkpoint68i/optim/optim_numbmod.F MITgcm-checkpoint68i/optim/optim_readdata.F MITgcm-checkpoint68i/optim/optim_sub.F MITgcm-checkpoint68i/optim/optim_write_control.F MITgcm-checkpoint68i/optim/optim_writedata.F MITgcm-checkpoint68i/optim/simul.F MITgcm-checkpoint68i/optim/to_do.txt MITgcm-checkpoint68i/optim/utils.F MITgcm-checkpoint68i/optim/xerbla.F MITgcm-checkpoint68i/pkg/ MITgcm-checkpoint68i/pkg/admtlm/ MITgcm-checkpoint68i/pkg/admtlm/ADMTLM_OPTIONS.h MITgcm-checkpoint68i/pkg/admtlm/admtlm_bypassad.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_driver.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd2model.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_init_fixed.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_map.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_metric.F MITgcm-checkpoint68i/pkg/admtlm/admtlm_model2dsvd.F MITgcm-checkpoint68i/pkg/admtlm/arpack_debug.h MITgcm-checkpoint68i/pkg/aim_v23/ MITgcm-checkpoint68i/pkg/aim_v23/AIM2DYN.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_CO2.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_FFIELDS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_GRID.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_OPTIONS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_PARAMS.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_SIZE.h MITgcm-checkpoint68i/pkg/aim_v23/AIM_TAVE.h MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2dyn.F MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2land.F MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2sioce.F MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics.F MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics_init.F MITgcm-checkpoint68i/pkg/aim_v23/aim_do_co2.F MITgcm-checkpoint68i/pkg/aim_v23/aim_do_physics.F MITgcm-checkpoint68i/pkg/aim_v23/aim_dyn2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_fields_load.F MITgcm-checkpoint68i/pkg/aim_v23/aim_initialise.F MITgcm-checkpoint68i/pkg/aim_v23/aim_land2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_land_impl.F MITgcm-checkpoint68i/pkg/aim_v23/aim_mnc_init.F MITgcm-checkpoint68i/pkg/aim_v23/aim_readparms.F MITgcm-checkpoint68i/pkg/aim_v23/aim_sice2aim.F MITgcm-checkpoint68i/pkg/aim_v23/aim_sice_impl.F MITgcm-checkpoint68i/pkg/aim_v23/aim_surf_bc.F MITgcm-checkpoint68i/pkg/aim_v23/aim_tendency_apply.F MITgcm-checkpoint68i/pkg/aim_v23/aim_v23_description.tex MITgcm-checkpoint68i/pkg/aim_v23/aim_write_local.F MITgcm-checkpoint68i/pkg/aim_v23/aim_write_phys.F MITgcm-checkpoint68i/pkg/aim_v23/aim_write_tave.F MITgcm-checkpoint68i/pkg/aim_v23/com_cnvcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_forcing.h MITgcm-checkpoint68i/pkg/aim_v23/com_forcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_lsccon.h MITgcm-checkpoint68i/pkg/aim_v23/com_physcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_physvar.h MITgcm-checkpoint68i/pkg/aim_v23/com_radcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_radvar.h MITgcm-checkpoint68i/pkg/aim_v23/com_sflcon.h MITgcm-checkpoint68i/pkg/aim_v23/com_vdicon.h MITgcm-checkpoint68i/pkg/aim_v23/phy_const.h MITgcm-checkpoint68i/pkg/aim_v23/phy_convmf.F 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MITgcm-checkpoint68i/pkg/autodiff/adcommon.h MITgcm-checkpoint68i/pkg/autodiff/addamp_adj.F MITgcm-checkpoint68i/pkg/autodiff/addummy_for_etan.F MITgcm-checkpoint68i/pkg/autodiff/addummy_in_dynamics.F MITgcm-checkpoint68i/pkg/autodiff/addummy_in_stepping.F MITgcm-checkpoint68i/pkg/autodiff/adopen_adclose.F MITgcm-checkpoint68i/pkg/autodiff/adread_adwrite.F MITgcm-checkpoint68i/pkg/autodiff/adread_adwrite_i.F MITgcm-checkpoint68i/pkg/autodiff/adzero_adj.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_ad_diff.list MITgcm-checkpoint68i/pkg/autodiff/autodiff_check.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_findunit.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode.flow MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set_ad.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set_g.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset_ad.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset_g.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_ini_model_io.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_init_varia.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_readparms.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_restore.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_store.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_whtapeio_sync.F MITgcm-checkpoint68i/pkg/autodiff/autodiff_whtapeio_sync.flow MITgcm-checkpoint68i/pkg/autodiff/cg2d.flow MITgcm-checkpoint68i/pkg/autodiff/cg2d_mad.F MITgcm-checkpoint68i/pkg/autodiff/check_lev1_dir_forcing.h MITgcm-checkpoint68i/pkg/autodiff/check_lev1_dir_ocephys.h MITgcm-checkpoint68i/pkg/autodiff/checkpoint.flow MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev1_directives.h MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev1_template.h MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev2_directives.h MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev3_directives.h MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev4_directives.h MITgcm-checkpoint68i/pkg/autodiff/common.flow MITgcm-checkpoint68i/pkg/autodiff/copy_ad_uv_outp.F MITgcm-checkpoint68i/pkg/autodiff/copy_advar_outp.F MITgcm-checkpoint68i/pkg/autodiff/damp_adj.F MITgcm-checkpoint68i/pkg/autodiff/damp_adj.flow MITgcm-checkpoint68i/pkg/autodiff/dummy_for_etan.F MITgcm-checkpoint68i/pkg/autodiff/dummy_for_etan.flow MITgcm-checkpoint68i/pkg/autodiff/dummy_in_dynamics.F MITgcm-checkpoint68i/pkg/autodiff/dummy_in_dynamics.flow MITgcm-checkpoint68i/pkg/autodiff/dummy_in_stepping.F MITgcm-checkpoint68i/pkg/autodiff/dummy_in_stepping.flow MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xy.F MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xy_uv.F MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xyz.F MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xyz_uv.F MITgcm-checkpoint68i/pkg/autodiff/g_common.h MITgcm-checkpoint68i/pkg/autodiff/g_dummy_for_etan.F MITgcm-checkpoint68i/pkg/autodiff/g_dummy_in_dynamics.F MITgcm-checkpoint68i/pkg/autodiff/g_dummy_in_stepping.F MITgcm-checkpoint68i/pkg/autodiff/global_max_ad.F MITgcm-checkpoint68i/pkg/autodiff/global_max_ad.flow MITgcm-checkpoint68i/pkg/autodiff/global_sum_ad.F MITgcm-checkpoint68i/pkg/autodiff/global_sum_ad.flow MITgcm-checkpoint68i/pkg/autodiff/global_sum_tile_ad.F MITgcm-checkpoint68i/pkg/autodiff/initialisation.flow MITgcm-checkpoint68i/pkg/autodiff/model_ad.flow MITgcm-checkpoint68i/pkg/autodiff/myactivefunction.F MITgcm-checkpoint68i/pkg/autodiff/myactivefunction.flow MITgcm-checkpoint68i/pkg/autodiff/myactivefunction_ad.F MITgcm-checkpoint68i/pkg/autodiff/system.flow MITgcm-checkpoint68i/pkg/autodiff/tamc.h MITgcm-checkpoint68i/pkg/autodiff/zero_adj.F MITgcm-checkpoint68i/pkg/autodiff/zero_adj.flow MITgcm-checkpoint68i/pkg/bbl/ MITgcm-checkpoint68i/pkg/bbl/BBL.h MITgcm-checkpoint68i/pkg/bbl/BBL_OPTIONS.h MITgcm-checkpoint68i/pkg/bbl/bbl_ad.flow MITgcm-checkpoint68i/pkg/bbl/bbl_ad_diff.list MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rho.F MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rhs.F MITgcm-checkpoint68i/pkg/bbl/bbl_check.F MITgcm-checkpoint68i/pkg/bbl/bbl_description.tex MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_init.F MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_state.F MITgcm-checkpoint68i/pkg/bbl/bbl_init_fixed.F MITgcm-checkpoint68i/pkg/bbl/bbl_init_varia.F MITgcm-checkpoint68i/pkg/bbl/bbl_read_pickup.F MITgcm-checkpoint68i/pkg/bbl/bbl_readparms.F MITgcm-checkpoint68i/pkg/bbl/bbl_tendency_apply.F MITgcm-checkpoint68i/pkg/bbl/bbl_write_pickup.F MITgcm-checkpoint68i/pkg/bling/ MITgcm-checkpoint68i/pkg/bling/BLING_LOAD.h MITgcm-checkpoint68i/pkg/bling/BLING_OPTIONS.h MITgcm-checkpoint68i/pkg/bling/BLING_VARS.h MITgcm-checkpoint68i/pkg/bling/CHANGES_TO_BLING.txt MITgcm-checkpoint68i/pkg/bling/bling_ad.flow MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/bling/bling_ad_diff.list MITgcm-checkpoint68i/pkg/bling/bling_airseaflux.F MITgcm-checkpoint68i/pkg/bling/bling_bio.F MITgcm-checkpoint68i/pkg/bling/bling_bio_nitrogen.F MITgcm-checkpoint68i/pkg/bling/bling_carbon_chem.F MITgcm-checkpoint68i/pkg/bling/bling_carbonate_init.F MITgcm-checkpoint68i/pkg/bling/bling_carbonate_sys.F MITgcm-checkpoint68i/pkg/bling/bling_description.txt MITgcm-checkpoint68i/pkg/bling/bling_diagnostics_init.F MITgcm-checkpoint68i/pkg/bling/bling_fields_load.F MITgcm-checkpoint68i/pkg/bling/bling_ini_forcing.F MITgcm-checkpoint68i/pkg/bling/bling_init_fixed.F MITgcm-checkpoint68i/pkg/bling/bling_init_varia.F MITgcm-checkpoint68i/pkg/bling/bling_light.F MITgcm-checkpoint68i/pkg/bling/bling_main.F MITgcm-checkpoint68i/pkg/bling/bling_min_val.F MITgcm-checkpoint68i/pkg/bling/bling_mixedlayer.F MITgcm-checkpoint68i/pkg/bling/bling_read_pickup.F MITgcm-checkpoint68i/pkg/bling/bling_readparms.F MITgcm-checkpoint68i/pkg/bling/bling_sgs.F MITgcm-checkpoint68i/pkg/bling/bling_solvesaphe.F MITgcm-checkpoint68i/pkg/bling/bling_tr_register.F MITgcm-checkpoint68i/pkg/bling/bling_write_pickup.F MITgcm-checkpoint68i/pkg/bulk_force/ MITgcm-checkpoint68i/pkg/bulk_force/BULKF.h MITgcm-checkpoint68i/pkg/bulk_force/BULKF_CONSERV.h MITgcm-checkpoint68i/pkg/bulk_force/BULKF_INT.h MITgcm-checkpoint68i/pkg/bulk_force/BULKF_PARAMS.h MITgcm-checkpoint68i/pkg/bulk_force/BULKF_TAVE.h MITgcm-checkpoint68i/pkg/bulk_force/BULK_FORCE_OPTIONS.h MITgcm-checkpoint68i/pkg/bulk_force/bulkf_ave.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_fields_load.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_flux_adjust.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_forcing.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_aim.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lanl.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lay.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_init_varia.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_output.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_readparms.F MITgcm-checkpoint68i/pkg/bulk_force/bulkf_sh2rh_aim.F MITgcm-checkpoint68i/pkg/cal/ MITgcm-checkpoint68i/pkg/cal/CAL_OPTIONS.h MITgcm-checkpoint68i/pkg/cal/cal.h MITgcm-checkpoint68i/pkg/cal/cal_ad_diff.list MITgcm-checkpoint68i/pkg/cal/cal_addtime.F MITgcm-checkpoint68i/pkg/cal/cal_checkdate.F MITgcm-checkpoint68i/pkg/cal/cal_compdates.F MITgcm-checkpoint68i/pkg/cal/cal_convdate.F MITgcm-checkpoint68i/pkg/cal/cal_copydate.F MITgcm-checkpoint68i/pkg/cal/cal_daysformonth.F MITgcm-checkpoint68i/pkg/cal/cal_dayspermonth.F MITgcm-checkpoint68i/pkg/cal/cal_description.tex MITgcm-checkpoint68i/pkg/cal/cal_fulldate.F MITgcm-checkpoint68i/pkg/cal/cal_getdate.F MITgcm-checkpoint68i/pkg/cal/cal_getmonthsrec.F MITgcm-checkpoint68i/pkg/cal/cal_init_fixed.F MITgcm-checkpoint68i/pkg/cal/cal_intdays.F MITgcm-checkpoint68i/pkg/cal/cal_intmonths.F MITgcm-checkpoint68i/pkg/cal/cal_intyears.F MITgcm-checkpoint68i/pkg/cal/cal_isleap.F MITgcm-checkpoint68i/pkg/cal/cal_monthsforyear.F MITgcm-checkpoint68i/pkg/cal/cal_monthsperyear.F MITgcm-checkpoint68i/pkg/cal/cal_numints.F MITgcm-checkpoint68i/pkg/cal/cal_printdate.F MITgcm-checkpoint68i/pkg/cal/cal_printerror.F MITgcm-checkpoint68i/pkg/cal/cal_readparms.F MITgcm-checkpoint68i/pkg/cal/cal_set.F MITgcm-checkpoint68i/pkg/cal/cal_stepsforday.F MITgcm-checkpoint68i/pkg/cal/cal_stepsperday.F MITgcm-checkpoint68i/pkg/cal/cal_subdates.F MITgcm-checkpoint68i/pkg/cal/cal_summary.F MITgcm-checkpoint68i/pkg/cal/cal_time2dump.F MITgcm-checkpoint68i/pkg/cal/cal_timeinterval.F MITgcm-checkpoint68i/pkg/cal/cal_timepassed.F MITgcm-checkpoint68i/pkg/cal/cal_timestamp.F MITgcm-checkpoint68i/pkg/cal/cal_toseconds.F MITgcm-checkpoint68i/pkg/cal/cal_weekday.F MITgcm-checkpoint68i/pkg/cd_code/ MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_OPTIONS.h MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_VARS.h MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad.flow MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_diff.list MITgcm-checkpoint68i/pkg/cd_code/cd_code_ini_vars.F MITgcm-checkpoint68i/pkg/cd_code/cd_code_init_fixed.F MITgcm-checkpoint68i/pkg/cd_code/cd_code_read_pickup.F MITgcm-checkpoint68i/pkg/cd_code/cd_code_scheme.F MITgcm-checkpoint68i/pkg/cd_code/cd_code_write_pickup.F MITgcm-checkpoint68i/pkg/cfc/ MITgcm-checkpoint68i/pkg/cfc/CFC.h MITgcm-checkpoint68i/pkg/cfc/CFC_ATMOS.h MITgcm-checkpoint68i/pkg/cfc/CFC_SIZE.h MITgcm-checkpoint68i/pkg/cfc/cfc11_forcing.F MITgcm-checkpoint68i/pkg/cfc/cfc11_surfforcing.F MITgcm-checkpoint68i/pkg/cfc/cfc12_forcing.F MITgcm-checkpoint68i/pkg/cfc/cfc12_surfforcing.F MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/cfc/cfc_ad_diff.list MITgcm-checkpoint68i/pkg/cfc/cfc_atmos.F MITgcm-checkpoint68i/pkg/cfc/cfc_check.F MITgcm-checkpoint68i/pkg/cfc/cfc_fields_load.F MITgcm-checkpoint68i/pkg/cfc/cfc_param.F MITgcm-checkpoint68i/pkg/cfc/cfc_readparms.F MITgcm-checkpoint68i/pkg/cfc/cfc_tr_register.F MITgcm-checkpoint68i/pkg/cheapaml/ MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML.h MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML_OPTIONS.h MITgcm-checkpoint68i/pkg/cheapaml/cheapaml.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_calc_rhs.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_coare3_flux.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_copy_edges.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_diagnostics_init.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_fields_load.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_fixed.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_varia.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_lanl_flux.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_read_pickup.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_readparms.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_seaice.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_timestep.F MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_write_pickup.F MITgcm-checkpoint68i/pkg/chronos/ MITgcm-checkpoint68i/pkg/chronos/chronos.F MITgcm-checkpoint68i/pkg/chronos/chronos.h MITgcm-checkpoint68i/pkg/compon_communic/ MITgcm-checkpoint68i/pkg/compon_communic/CPLR_SIG.h MITgcm-checkpoint68i/pkg/compon_communic/comprecv_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8.F MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8.F MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8.F MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_i4vec.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4tiles.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8.F MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8tiles.F MITgcm-checkpoint68i/pkg/compon_communic/generate_tag.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_init.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_tile_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_init.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_tile_register.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_all_check.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2dbl.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2int.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2real.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_dbl2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init1.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2a.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2b.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_initcomp.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_int2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_match_comp.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_real2char.F MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_sortranks.F MITgcm-checkpoint68i/pkg/cost/ MITgcm-checkpoint68i/pkg/cost/COST_OPTIONS.h MITgcm-checkpoint68i/pkg/cost/adcost.h MITgcm-checkpoint68i/pkg/cost/cost.h MITgcm-checkpoint68i/pkg/cost/cost_accumulate_mean.F MITgcm-checkpoint68i/pkg/cost/cost_ad.flow MITgcm-checkpoint68i/pkg/cost/cost_ad_diff.list MITgcm-checkpoint68i/pkg/cost/cost_atlantic_heat.F MITgcm-checkpoint68i/pkg/cost/cost_check.F MITgcm-checkpoint68i/pkg/cost/cost_dependent_init.F MITgcm-checkpoint68i/pkg/cost/cost_depth.F MITgcm-checkpoint68i/pkg/cost/cost_final.F MITgcm-checkpoint68i/pkg/cost/cost_final_restore.F MITgcm-checkpoint68i/pkg/cost/cost_final_store.F MITgcm-checkpoint68i/pkg/cost/cost_init_varia.F MITgcm-checkpoint68i/pkg/cost/cost_readparms.F MITgcm-checkpoint68i/pkg/cost/cost_state_final.F MITgcm-checkpoint68i/pkg/cost/cost_test.F MITgcm-checkpoint68i/pkg/cost/cost_tile.F MITgcm-checkpoint68i/pkg/cost/cost_tracer.F MITgcm-checkpoint68i/pkg/cost/cost_vector.F MITgcm-checkpoint68i/pkg/cost/g_cost.h MITgcm-checkpoint68i/pkg/ctrl/ MITgcm-checkpoint68i/pkg/ctrl/CTRL_FIELDS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_GENARR.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_OBCS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_OPTIONS.h MITgcm-checkpoint68i/pkg/ctrl/CTRL_SIZE.h MITgcm-checkpoint68i/pkg/ctrl/adctrl_bound.F MITgcm-checkpoint68i/pkg/ctrl/ctrl.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_diff.list MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.flow MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound_tl.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_check.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_driver.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_depth_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_description.tex MITgcm-checkpoint68i/pkg/ctrl/ctrl_dummy.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen_rec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_mask.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcse.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsn.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcss.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsw.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_getrec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_hfacc_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_ctrlvar.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_obcs_variables.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_rec.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_variables.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_wet.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_local_params.h MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_forcing.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_genarr.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_gentim2d.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_ecco.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gen.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_genarr.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gentim2d.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_pack.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_readparms.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_fname.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xy.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xyz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_yz.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_smooth.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_summary.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_swapffields.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_toolbox.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_unpack.F MITgcm-checkpoint68i/pkg/ctrl/ctrl_weights.h MITgcm-checkpoint68i/pkg/ctrl/optim.h MITgcm-checkpoint68i/pkg/ctrl/optim_readparms.F MITgcm-checkpoint68i/pkg/debug/ MITgcm-checkpoint68i/pkg/debug/DEBUG_OPTIONS.h MITgcm-checkpoint68i/pkg/debug/chksum_tiled.F MITgcm-checkpoint68i/pkg/debug/debug_ad.flow MITgcm-checkpoint68i/pkg/debug/debug_call.F MITgcm-checkpoint68i/pkg/debug/debug_cs_corner_uv.F MITgcm-checkpoint68i/pkg/debug/debug_enter.F MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rl.F MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rs.F MITgcm-checkpoint68i/pkg/debug/debug_leave.F MITgcm-checkpoint68i/pkg/debug/debug_msg.F MITgcm-checkpoint68i/pkg/debug/debug_stats_rl.F MITgcm-checkpoint68i/pkg/debug/debug_stats_rs.F MITgcm-checkpoint68i/pkg/debug/fill_in_corners_rl.F MITgcm-checkpoint68i/pkg/debug/write_fullarray_rl.F MITgcm-checkpoint68i/pkg/debug/write_fullarray_rs.F MITgcm-checkpoint68i/pkg/diagnostics/ MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_CALC.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_SIZE.h MITgcm-checkpoint68i/pkg/diagnostics/DIAGSTATS_REGIONS.h MITgcm-checkpoint68i/pkg/diagnostics/DIAG_OPTIONS.h MITgcm-checkpoint68i/pkg/diagnostics/diag_calc_psivel.F MITgcm-checkpoint68i/pkg/diagnostics/diag_cg2d.F MITgcm-checkpoint68i/pkg/diagnostics/diag_vegtile_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad.flow MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad_diff.list MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_addtolist.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_calc_phivel.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_check.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_clear.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_field.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_rs.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_state.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fract_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ini_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_early.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_fixed.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_varia.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_p2p.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_vert.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_is_on.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_list_check.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_main_init.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_mnc_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_read_pickup.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_readparms.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill_rs.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_levels.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_pointers.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_setdiag.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_status_error.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_sum_levels.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_summary.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_switch_onoff.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_utils.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_adj.F MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_pickup.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ascii_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_clear.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_close_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_fill.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_global.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ini_io.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_local.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_mnc_out.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_others_calc.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_output.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_pointers.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_regions.F MITgcm-checkpoint68i/pkg/diagnostics/diagstats_setdiag.F MITgcm-checkpoint68i/pkg/dic/ MITgcm-checkpoint68i/pkg/dic/DIC_ATMOS.h MITgcm-checkpoint68i/pkg/dic/DIC_COST.h MITgcm-checkpoint68i/pkg/dic/DIC_CTRL.h MITgcm-checkpoint68i/pkg/dic/DIC_LOAD.h MITgcm-checkpoint68i/pkg/dic/DIC_OPTIONS.h MITgcm-checkpoint68i/pkg/dic/DIC_VARS.h MITgcm-checkpoint68i/pkg/dic/alk_surfforcing.F MITgcm-checkpoint68i/pkg/dic/bio_export.F MITgcm-checkpoint68i/pkg/dic/calcite_saturation.F MITgcm-checkpoint68i/pkg/dic/car_flux.F MITgcm-checkpoint68i/pkg/dic/car_flux_omega_top.F MITgcm-checkpoint68i/pkg/dic/carbon_chem.F MITgcm-checkpoint68i/pkg/dic/dic_ad.flow MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/dic/dic_ad_diff.list MITgcm-checkpoint68i/pkg/dic/dic_atmos.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_diags.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_forcing.F MITgcm-checkpoint68i/pkg/dic/dic_biotic_init.F MITgcm-checkpoint68i/pkg/dic/dic_cost.F MITgcm-checkpoint68i/pkg/dic/dic_diagnostics_init.F MITgcm-checkpoint68i/pkg/dic/dic_fields_load.F MITgcm-checkpoint68i/pkg/dic/dic_fields_update.F MITgcm-checkpoint68i/pkg/dic/dic_ini_atmos.F MITgcm-checkpoint68i/pkg/dic/dic_ini_forcing.F MITgcm-checkpoint68i/pkg/dic/dic_init_fixed.F MITgcm-checkpoint68i/pkg/dic/dic_init_varia.F MITgcm-checkpoint68i/pkg/dic/dic_mnc_init.F MITgcm-checkpoint68i/pkg/dic/dic_read_co2_pickup.F MITgcm-checkpoint68i/pkg/dic/dic_read_pickup.F MITgcm-checkpoint68i/pkg/dic/dic_readparms.F MITgcm-checkpoint68i/pkg/dic/dic_set_control.F MITgcm-checkpoint68i/pkg/dic/dic_solvesaphe.F MITgcm-checkpoint68i/pkg/dic/dic_store_fluxco2.F MITgcm-checkpoint68i/pkg/dic/dic_surfforcing.F MITgcm-checkpoint68i/pkg/dic/dic_surfforcing_init.F MITgcm-checkpoint68i/pkg/dic/dic_tr_register.F MITgcm-checkpoint68i/pkg/dic/dic_write_pickup.F MITgcm-checkpoint68i/pkg/dic/fe_chem.F MITgcm-checkpoint68i/pkg/dic/insol.F MITgcm-checkpoint68i/pkg/dic/o2_surfforcing.F MITgcm-checkpoint68i/pkg/dic/phos_flux.F MITgcm-checkpoint68i/pkg/down_slope/ MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_OPTIONS.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_PARAMS.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_SIZE.h MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_VARS.h MITgcm-checkpoint68i/pkg/down_slope/dwnslp_ad_diff.list MITgcm-checkpoint68i/pkg/down_slope/dwnslp_apply.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_flow.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_rho.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_diagnostics_init.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_fixed.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_varia.F MITgcm-checkpoint68i/pkg/down_slope/dwnslp_readparms.F MITgcm-checkpoint68i/pkg/ebm/ MITgcm-checkpoint68i/pkg/ebm/EBM.h MITgcm-checkpoint68i/pkg/ebm/EBM_OPTIONS.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ebm/ebm_ad_diff.list MITgcm-checkpoint68i/pkg/ebm/ebm_area_t.F MITgcm-checkpoint68i/pkg/ebm/ebm_atmosphere.F MITgcm-checkpoint68i/pkg/ebm/ebm_driver.F MITgcm-checkpoint68i/pkg/ebm/ebm_ini_vars.F MITgcm-checkpoint68i/pkg/ebm/ebm_load_climatology.F MITgcm-checkpoint68i/pkg/ebm/ebm_readparms.F MITgcm-checkpoint68i/pkg/ebm/ebm_wind_perturb.F MITgcm-checkpoint68i/pkg/ebm/ebm_zonalmean.F MITgcm-checkpoint68i/pkg/ecco/ MITgcm-checkpoint68i/pkg/ecco/ECCO.h MITgcm-checkpoint68i/pkg/ecco/ECCO_OPTIONS.h MITgcm-checkpoint68i/pkg/ecco/ECCO_SIZE.h MITgcm-checkpoint68i/pkg/ecco/cost_averagesfields.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesflags.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesgeneric.F MITgcm-checkpoint68i/pkg/ecco/cost_averagesinit.F MITgcm-checkpoint68i/pkg/ecco/cost_bp_read.F MITgcm-checkpoint68i/pkg/ecco/cost_forcing.F MITgcm-checkpoint68i/pkg/ecco/cost_gencal.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_all.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_assignperiod.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_boxmean.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_bpv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_customize.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_glbmean.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_moc.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_seaicev4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sshv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sstv4.F MITgcm-checkpoint68i/pkg/ecco/cost_gencost_transp.F MITgcm-checkpoint68i/pkg/ecco/cost_generic.F MITgcm-checkpoint68i/pkg/ecco/cost_genread.F MITgcm-checkpoint68i/pkg/ecco/cost_hyd.F MITgcm-checkpoint68i/pkg/ecco/cost_internal_params.F MITgcm-checkpoint68i/pkg/ecco/cost_obcs.F MITgcm-checkpoint68i/pkg/ecco/cost_obcs_ageos.F MITgcm-checkpoint68i/pkg/ecco/cost_obcse.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsn.F MITgcm-checkpoint68i/pkg/ecco/cost_obcss.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsvol.F MITgcm-checkpoint68i/pkg/ecco/cost_obcsw.F MITgcm-checkpoint68i/pkg/ecco/cost_sla_read.F MITgcm-checkpoint68i/pkg/ecco/cost_sla_read_yd.F MITgcm-checkpoint68i/pkg/ecco/cost_ssh.F MITgcm-checkpoint68i/pkg/ecco/ecco_ad.flow MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ecco/ecco_ad_diff.list MITgcm-checkpoint68i/pkg/ecco/ecco_check.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost.h MITgcm-checkpoint68i/pkg/ecco/ecco_cost_driver.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_final.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_barfiles.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_fixed.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_varia.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_summary.F MITgcm-checkpoint68i/pkg/ecco/ecco_cost_weights.F MITgcm-checkpoint68i/pkg/ecco/ecco_diagnostics_init.F MITgcm-checkpoint68i/pkg/ecco/ecco_init_fixed.F MITgcm-checkpoint68i/pkg/ecco/ecco_init_varia.F MITgcm-checkpoint68i/pkg/ecco/ecco_local_params.h MITgcm-checkpoint68i/pkg/ecco/ecco_phys.F MITgcm-checkpoint68i/pkg/ecco/ecco_readparms.F MITgcm-checkpoint68i/pkg/ecco/ecco_summary.F MITgcm-checkpoint68i/pkg/ecco/ecco_toolbox.F MITgcm-checkpoint68i/pkg/ecco/stergloh_output.F MITgcm-checkpoint68i/pkg/embed_files/ MITgcm-checkpoint68i/pkg/embed_files/EMBED_FILES_OPTIONS.h MITgcm-checkpoint68i/pkg/embed_files/README.txt MITgcm-checkpoint68i/pkg/embed_files/decode_files.c MITgcm-checkpoint68i/pkg/embed_files/embed_files_init.F MITgcm-checkpoint68i/pkg/exch2/ MITgcm-checkpoint68i/pkg/exch2/Makefile MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_BUFFER.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_PARAMS.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_SIZE.h MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_TOPOLOGY.h MITgcm-checkpoint68i/pkg/exch2/W2_OPTIONS.h MITgcm-checkpoint68i/pkg/exch2/exch2.flow MITgcm-checkpoint68i/pkg/exch2/exch2_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_diff.list MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_check_depths.F MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_get_scal_bounds.F MITgcm-checkpoint68i/pkg/exch2/exch2_get_uv_bounds.F MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube_ad.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube.template MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube_ad.template MITgcm-checkpoint68i/pkg/exch2/exch2_s3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx1.template MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx2.template MITgcm-checkpoint68i/pkg/exch2/exch2_sm_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_agrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_bgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_cgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_uv_dgrid_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/exch2_z_3d_rx.template MITgcm-checkpoint68i/pkg/exch2/w2_cumulsum_z_tile.F MITgcm-checkpoint68i/pkg/exch2/w2_e2setup.F MITgcm-checkpoint68i/pkg/exch2/w2_eeboot.F MITgcm-checkpoint68i/pkg/exch2/w2_map_procs.F MITgcm-checkpoint68i/pkg/exch2/w2_print_comm_sequence.F MITgcm-checkpoint68i/pkg/exch2/w2_print_e2setup.F MITgcm-checkpoint68i/pkg/exch2/w2_readparms.F MITgcm-checkpoint68i/pkg/exch2/w2_set_cs6_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_f2f_index.F MITgcm-checkpoint68i/pkg/exch2/w2_set_gen_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_map_cumsum.F MITgcm-checkpoint68i/pkg/exch2/w2_set_map_tiles.F MITgcm-checkpoint68i/pkg/exch2/w2_set_myown_facets.F MITgcm-checkpoint68i/pkg/exch2/w2_set_single_facet.F MITgcm-checkpoint68i/pkg/exch2/w2_set_tile2tiles.F MITgcm-checkpoint68i/pkg/exf/ MITgcm-checkpoint68i/pkg/exf/EXF_CONSTANTS.h MITgcm-checkpoint68i/pkg/exf/EXF_FIELDS.h MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_PARAM.h MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_SIZE.h MITgcm-checkpoint68i/pkg/exf/EXF_OPTIONS.h MITgcm-checkpoint68i/pkg/exf/EXF_PARAM.h MITgcm-checkpoint68i/pkg/exf/TODO.txt MITgcm-checkpoint68i/pkg/exf/exf_ad.flow MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/exf/exf_ad_diff.list MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots.F MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots__g.F MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots_ad.F MITgcm-checkpoint68i/pkg/exf/exf_bulkformulae.F MITgcm-checkpoint68i/pkg/exf/exf_check.F MITgcm-checkpoint68i/pkg/exf/exf_check_range.F MITgcm-checkpoint68i/pkg/exf/exf_description.tex MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_fill.F MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_init.F MITgcm-checkpoint68i/pkg/exf/exf_filter_rl.F MITgcm-checkpoint68i/pkg/exf/exf_getclim.F MITgcm-checkpoint68i/pkg/exf/exf_getffield_start.F MITgcm-checkpoint68i/pkg/exf/exf_getffieldrec.F MITgcm-checkpoint68i/pkg/exf/exf_getffields.F MITgcm-checkpoint68i/pkg/exf/exf_getfield_start.F MITgcm-checkpoint68i/pkg/exf/exf_getforcing.F MITgcm-checkpoint68i/pkg/exf/exf_getmonthsrec.F MITgcm-checkpoint68i/pkg/exf/exf_getsurfacefluxes.F MITgcm-checkpoint68i/pkg/exf/exf_getyearlyfieldname.F MITgcm-checkpoint68i/pkg/exf/exf_init_fixed.F MITgcm-checkpoint68i/pkg/exf/exf_init_fld.F MITgcm-checkpoint68i/pkg/exf/exf_init_interp.F MITgcm-checkpoint68i/pkg/exf/exf_init_varia.F MITgcm-checkpoint68i/pkg/exf/exf_interp.F MITgcm-checkpoint68i/pkg/exf/exf_interp_read.F MITgcm-checkpoint68i/pkg/exf/exf_interp_uv.F MITgcm-checkpoint68i/pkg/exf/exf_interpolate.F MITgcm-checkpoint68i/pkg/exf/exf_mapfields.F MITgcm-checkpoint68i/pkg/exf/exf_monitor.F MITgcm-checkpoint68i/pkg/exf/exf_monitor_ad.F MITgcm-checkpoint68i/pkg/exf/exf_radiation.F MITgcm-checkpoint68i/pkg/exf/exf_readparms.F MITgcm-checkpoint68i/pkg/exf/exf_set_fld.F MITgcm-checkpoint68i/pkg/exf/exf_set_gen.F MITgcm-checkpoint68i/pkg/exf/exf_set_obcs.F MITgcm-checkpoint68i/pkg/exf/exf_set_uv.F MITgcm-checkpoint68i/pkg/exf/exf_summary.F MITgcm-checkpoint68i/pkg/exf/exf_swapffields.F MITgcm-checkpoint68i/pkg/exf/exf_weight_sfx_diags.F MITgcm-checkpoint68i/pkg/exf/exf_wind.F MITgcm-checkpoint68i/pkg/exf/exf_zenithangle.F MITgcm-checkpoint68i/pkg/exf/exf_zenithangle_table.F MITgcm-checkpoint68i/pkg/fizhi/ MITgcm-checkpoint68i/pkg/fizhi/AtoC.F MITgcm-checkpoint68i/pkg/fizhi/CtoA.F MITgcm-checkpoint68i/pkg/fizhi/FIZHI_OPTIONS.h MITgcm-checkpoint68i/pkg/fizhi/cah-dat.h MITgcm-checkpoint68i/pkg/fizhi/cai-dat.h MITgcm-checkpoint68i/pkg/fizhi/chronos.h MITgcm-checkpoint68i/pkg/fizhi/co2-tran3.h MITgcm-checkpoint68i/pkg/fizhi/do_fizhi.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_SHP.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_SIZE.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_alarms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_chemistry_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_clockstuff.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagalarms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagnostics_init.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_driver.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_earth_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_fillnegs.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_gwdrag.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_chem.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_fixed.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vars.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_veg.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vegsurftiles.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_io_comms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_SIZE.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_lsm.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_lwrad.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_mnc_init.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_moist.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_mpistuff.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_ocean_coms.h MITgcm-checkpoint68i/pkg/fizhi/fizhi_rayleigh.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_read_pickup.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_readparms.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_readwrite_vegtiles.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_step_diag.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_swrad.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_tendency_apply.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_turb.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_update_time.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_utils.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_wrapper.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_datetime.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_pickup.F MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_state.F MITgcm-checkpoint68i/pkg/fizhi/getcon.F MITgcm-checkpoint68i/pkg/fizhi/getpwhere.F MITgcm-checkpoint68i/pkg/fizhi/h2o-tran3.h MITgcm-checkpoint68i/pkg/fizhi/o3-tran3.h MITgcm-checkpoint68i/pkg/fizhi/sibber.h MITgcm-checkpoint68i/pkg/fizhi/slprs.F MITgcm-checkpoint68i/pkg/fizhi/snwmid.h MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_corr.F MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_fg.F MITgcm-checkpoint68i/pkg/fizhi/step_physics.F MITgcm-checkpoint68i/pkg/fizhi/update_chemistry_exports.F MITgcm-checkpoint68i/pkg/fizhi/update_earth_exports.F MITgcm-checkpoint68i/pkg/fizhi/update_ocean_exports.F MITgcm-checkpoint68i/pkg/flt/ MITgcm-checkpoint68i/pkg/flt/FLT.h MITgcm-checkpoint68i/pkg/flt/FLT_BUFF.h MITgcm-checkpoint68i/pkg/flt/FLT_OPTIONS.h MITgcm-checkpoint68i/pkg/flt/FLT_SIZE.h MITgcm-checkpoint68i/pkg/flt/README.flt MITgcm-checkpoint68i/pkg/flt/exch2_recv_get_vec.F MITgcm-checkpoint68i/pkg/flt/exch2_send_put_vec.F MITgcm-checkpoint68i/pkg/flt/exch_recv_get_vec.F MITgcm-checkpoint68i/pkg/flt/exch_send_put_vec.F MITgcm-checkpoint68i/pkg/flt/flt_down.F MITgcm-checkpoint68i/pkg/flt/flt_exch2.F MITgcm-checkpoint68i/pkg/flt/flt_exchg.F MITgcm-checkpoint68i/pkg/flt/flt_init_fixed.F MITgcm-checkpoint68i/pkg/flt/flt_init_varia.F MITgcm-checkpoint68i/pkg/flt/flt_interp_linear.F MITgcm-checkpoint68i/pkg/flt/flt_main.F MITgcm-checkpoint68i/pkg/flt/flt_mapping.F MITgcm-checkpoint68i/pkg/flt/flt_readparms.F MITgcm-checkpoint68i/pkg/flt/flt_runga2.F MITgcm-checkpoint68i/pkg/flt/flt_runga4.F MITgcm-checkpoint68i/pkg/flt/flt_traj.F MITgcm-checkpoint68i/pkg/flt/flt_up.F MITgcm-checkpoint68i/pkg/flt/flt_write_pickup.F MITgcm-checkpoint68i/pkg/frazil/ MITgcm-checkpoint68i/pkg/frazil/FRAZIL.h MITgcm-checkpoint68i/pkg/frazil/FRAZIL_OPTIONS.h MITgcm-checkpoint68i/pkg/frazil/frazil_ad.flow MITgcm-checkpoint68i/pkg/frazil/frazil_ad_diff.list MITgcm-checkpoint68i/pkg/frazil/frazil_calc_rhs.F MITgcm-checkpoint68i/pkg/frazil/frazil_description.tex MITgcm-checkpoint68i/pkg/frazil/frazil_diagnostics_init.F MITgcm-checkpoint68i/pkg/frazil/frazil_init_fixed.F MITgcm-checkpoint68i/pkg/frazil/frazil_init_varia.F MITgcm-checkpoint68i/pkg/frazil/frazil_tendency_apply.F MITgcm-checkpoint68i/pkg/gchem/ MITgcm-checkpoint68i/pkg/gchem/GCHEM.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_FIELDS.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_OPTIONS.h MITgcm-checkpoint68i/pkg/gchem/GCHEM_SIZE.h MITgcm-checkpoint68i/pkg/gchem/gchem_ad_diff.list MITgcm-checkpoint68i/pkg/gchem/gchem_add_tendency.F MITgcm-checkpoint68i/pkg/gchem/gchem_calc_tendency.F MITgcm-checkpoint68i/pkg/gchem/gchem_check.F MITgcm-checkpoint68i/pkg/gchem/gchem_diagnostics_init.F MITgcm-checkpoint68i/pkg/gchem/gchem_fields_load.F MITgcm-checkpoint68i/pkg/gchem/gchem_forcing_sep.F MITgcm-checkpoint68i/pkg/gchem/gchem_init_fixed.F MITgcm-checkpoint68i/pkg/gchem/gchem_init_vari.F MITgcm-checkpoint68i/pkg/gchem/gchem_output.F MITgcm-checkpoint68i/pkg/gchem/gchem_readparms.F MITgcm-checkpoint68i/pkg/gchem/gchem_surfmean.F MITgcm-checkpoint68i/pkg/gchem/gchem_tr_register.F MITgcm-checkpoint68i/pkg/gchem/gchem_write_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/ MITgcm-checkpoint68i/pkg/generic_advdiff/GAD.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_FLUX_LIMITER.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_OPTIONS.h MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_SOM_VARS.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_diff.list MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advection.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advscheme.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_calc_rhs.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_check.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_del2.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_init.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_state.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_exch_som.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_implicit_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_fixed.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_varia.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_plm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_fun.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_read_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_advect.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_exchanges.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_fill_cs_corner.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_lim_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_prep_cs_corner.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_x.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_y.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3c4_impl_r.F MITgcm-checkpoint68i/pkg/generic_advdiff/gad_write_pickup.F MITgcm-checkpoint68i/pkg/generic_advdiff/generic_advdiff.tex MITgcm-checkpoint68i/pkg/generic_advdiff/salt_fill.F MITgcm-checkpoint68i/pkg/ggl90/ MITgcm-checkpoint68i/pkg/ggl90/GGL90.h MITgcm-checkpoint68i/pkg/ggl90/GGL90_OPTIONS.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_diff.list MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_diff.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_visc.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_check.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_diagnostics_init.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_exchanges.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_idemix.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_fixed.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_varia.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_output.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_read_pickup.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_readparms.F MITgcm-checkpoint68i/pkg/ggl90/ggl90_write_pickup.F MITgcm-checkpoint68i/pkg/gmredi/ MITgcm-checkpoint68i/pkg/gmredi/GMREDI.h MITgcm-checkpoint68i/pkg/gmredi/GMREDI_OPTIONS.h MITgcm-checkpoint68i/pkg/gmredi/GMREDI_TAVE.h MITgcm-checkpoint68i/pkg/gmredi/README_ADJOINT MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad.flow MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad_diff.list MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_bates_k.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_diff.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_eigs.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_b.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_bvp.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_qgleith.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_tensor.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_urms.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_check.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_description.tex MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_fill.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_impl.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_init.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_do_exch.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_fixed.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_varia.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_mnc_init.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_output.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_read_pickup.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_readparms.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_residual_flow.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_rtransport.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_limit.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_psi.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_write_pickup.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_xtransport.F MITgcm-checkpoint68i/pkg/gmredi/gmredi_ytransport.F MITgcm-checkpoint68i/pkg/gmredi/submeso_calc_psi.F MITgcm-checkpoint68i/pkg/grdchk/ MITgcm-checkpoint68i/pkg/grdchk/GRDCHK_OPTIONS.h MITgcm-checkpoint68i/pkg/grdchk/grdchk.h MITgcm-checkpoint68i/pkg/grdchk/grdchk_check.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_description.tex MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_obcs_mask.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_position.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_getadxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_getxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_init.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_loc.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_main.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_print.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_readparms.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_setxx.F MITgcm-checkpoint68i/pkg/grdchk/grdchk_summary.F MITgcm-checkpoint68i/pkg/gridalt/ MITgcm-checkpoint68i/pkg/gridalt/GRIDALT_OPTIONS.h MITgcm-checkpoint68i/pkg/gridalt/dyn2phys.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_diagnostics_init.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_initialise.F MITgcm-checkpoint68i/pkg/gridalt/gridalt_mapping.h MITgcm-checkpoint68i/pkg/gridalt/gridalt_update.F MITgcm-checkpoint68i/pkg/gridalt/make_phys_grid.F MITgcm-checkpoint68i/pkg/gridalt/phys2dyn.F MITgcm-checkpoint68i/pkg/icefront/ MITgcm-checkpoint68i/pkg/icefront/ICEFRONT.h MITgcm-checkpoint68i/pkg/icefront/ICEFRONT_OPTIONS.h MITgcm-checkpoint68i/pkg/icefront/ICFSymbol.txt MITgcm-checkpoint68i/pkg/icefront/icefront_check.F MITgcm-checkpoint68i/pkg/icefront/icefront_description.tex MITgcm-checkpoint68i/pkg/icefront/icefront_diagnostics_init.F MITgcm-checkpoint68i/pkg/icefront/icefront_init_fixed.F MITgcm-checkpoint68i/pkg/icefront/icefront_init_varia.F MITgcm-checkpoint68i/pkg/icefront/icefront_readparms.F MITgcm-checkpoint68i/pkg/icefront/icefront_tendency_apply.F MITgcm-checkpoint68i/pkg/icefront/icefront_thermodynamics.F MITgcm-checkpoint68i/pkg/kl10/ MITgcm-checkpoint68i/pkg/kl10/KL10.h MITgcm-checkpoint68i/pkg/kl10/KL10_DIAGS.h MITgcm-checkpoint68i/pkg/kl10/KL10_OPTIONS.h MITgcm-checkpoint68i/pkg/kl10/KL10_TAVE.h MITgcm-checkpoint68i/pkg/kl10/kl10_calc.F MITgcm-checkpoint68i/pkg/kl10/kl10_calc_diff.F MITgcm-checkpoint68i/pkg/kl10/kl10_calc_visc.F MITgcm-checkpoint68i/pkg/kl10/kl10_check.F MITgcm-checkpoint68i/pkg/kl10/kl10_diagnostics_init.F MITgcm-checkpoint68i/pkg/kl10/kl10_init_fixed.F MITgcm-checkpoint68i/pkg/kl10/kl10_init_varia.F MITgcm-checkpoint68i/pkg/kl10/kl10_output.F MITgcm-checkpoint68i/pkg/kl10/kl10_readparms.F MITgcm-checkpoint68i/pkg/kpp/ MITgcm-checkpoint68i/pkg/kpp/KPP.h MITgcm-checkpoint68i/pkg/kpp/KPP_OPTIONS.h MITgcm-checkpoint68i/pkg/kpp/KPP_PARAMS.h MITgcm-checkpoint68i/pkg/kpp/KPP_TAVE.h MITgcm-checkpoint68i/pkg/kpp/kpp_ad_diff.list MITgcm-checkpoint68i/pkg/kpp/kpp_calc.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_ptr.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_s.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_t.F MITgcm-checkpoint68i/pkg/kpp/kpp_calc_visc.F MITgcm-checkpoint68i/pkg/kpp/kpp_check.F MITgcm-checkpoint68i/pkg/kpp/kpp_description.tex MITgcm-checkpoint68i/pkg/kpp/kpp_diagnostics_init.F MITgcm-checkpoint68i/pkg/kpp/kpp_do_exch.F MITgcm-checkpoint68i/pkg/kpp/kpp_forcing_surf.F MITgcm-checkpoint68i/pkg/kpp/kpp_init_fixed.F MITgcm-checkpoint68i/pkg/kpp/kpp_init_varia.F MITgcm-checkpoint68i/pkg/kpp/kpp_output.F MITgcm-checkpoint68i/pkg/kpp/kpp_readparms.F MITgcm-checkpoint68i/pkg/kpp/kpp_routines.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_ptr.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_s.F MITgcm-checkpoint68i/pkg/kpp/kpp_transport_t.F MITgcm-checkpoint68i/pkg/land/ MITgcm-checkpoint68i/pkg/land/LAND_OPTIONS.h MITgcm-checkpoint68i/pkg/land/LAND_PARAMS.h MITgcm-checkpoint68i/pkg/land/LAND_SIZE.h MITgcm-checkpoint68i/pkg/land/LAND_TAVE.h MITgcm-checkpoint68i/pkg/land/LAND_VARS.h MITgcm-checkpoint68i/pkg/land/land_albedo.F MITgcm-checkpoint68i/pkg/land/land_check.F MITgcm-checkpoint68i/pkg/land/land_diagnostics_init.F MITgcm-checkpoint68i/pkg/land/land_diagnostics_state.F MITgcm-checkpoint68i/pkg/land/land_do_diags.F MITgcm-checkpoint68i/pkg/land/land_impl_temp.F MITgcm-checkpoint68i/pkg/land/land_ini_vars.F MITgcm-checkpoint68i/pkg/land/land_init_fixed.F MITgcm-checkpoint68i/pkg/land/land_mnc_init.F MITgcm-checkpoint68i/pkg/land/land_monitor.F MITgcm-checkpoint68i/pkg/land/land_output.F MITgcm-checkpoint68i/pkg/land/land_read_pickup.F MITgcm-checkpoint68i/pkg/land/land_readparms.F MITgcm-checkpoint68i/pkg/land/land_stepfwd.F MITgcm-checkpoint68i/pkg/land/land_write_pickup.F MITgcm-checkpoint68i/pkg/layers/ MITgcm-checkpoint68i/pkg/layers/LAYERS.h MITgcm-checkpoint68i/pkg/layers/LAYERS_OPTIONS.h MITgcm-checkpoint68i/pkg/layers/LAYERS_SIZE.h MITgcm-checkpoint68i/pkg/layers/layers_ad_diff.list MITgcm-checkpoint68i/pkg/layers/layers_calc.F MITgcm-checkpoint68i/pkg/layers/layers_check.F MITgcm-checkpoint68i/pkg/layers/layers_diagnostics_init.F MITgcm-checkpoint68i/pkg/layers/layers_fluxcalc.F MITgcm-checkpoint68i/pkg/layers/layers_init_fixed.F MITgcm-checkpoint68i/pkg/layers/layers_init_varia.F MITgcm-checkpoint68i/pkg/layers/layers_mnc_init.F MITgcm-checkpoint68i/pkg/layers/layers_output.F MITgcm-checkpoint68i/pkg/layers/layers_readparms.F MITgcm-checkpoint68i/pkg/layers/layers_save.F MITgcm-checkpoint68i/pkg/layers/layers_thermodynamics.F MITgcm-checkpoint68i/pkg/layers/layers_wsurf_tr.F MITgcm-checkpoint68i/pkg/longstep/ MITgcm-checkpoint68i/pkg/longstep/LONGSTEP.h MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_OPTIONS.h MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_PARAMS.h MITgcm-checkpoint68i/pkg/longstep/README MITgcm-checkpoint68i/pkg/longstep/longstep_average.F MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d_fac.F MITgcm-checkpoint68i/pkg/longstep/longstep_check_iters.F MITgcm-checkpoint68i/pkg/longstep/longstep_correction_step.F MITgcm-checkpoint68i/pkg/longstep/longstep_diagnostics_init.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_fac.F MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_rs.F MITgcm-checkpoint68i/pkg/longstep/longstep_forcing_surf.F MITgcm-checkpoint68i/pkg/longstep/longstep_init_fixed.F MITgcm-checkpoint68i/pkg/longstep/longstep_init_varia.F MITgcm-checkpoint68i/pkg/longstep/longstep_readparms.F MITgcm-checkpoint68i/pkg/longstep/longstep_reset_3d.F MITgcm-checkpoint68i/pkg/longstep/longstep_thermodynamics.F MITgcm-checkpoint68i/pkg/matrix/ MITgcm-checkpoint68i/pkg/matrix/MATRIX.h MITgcm-checkpoint68i/pkg/matrix/MATRIX_OPTIONS.h MITgcm-checkpoint68i/pkg/matrix/matrix_init_varia.F MITgcm-checkpoint68i/pkg/matrix/matrix_output.F MITgcm-checkpoint68i/pkg/matrix/matrix_readparms.F MITgcm-checkpoint68i/pkg/matrix/matrix_store_tendency.F MITgcm-checkpoint68i/pkg/matrix/matrix_write_grid.F MITgcm-checkpoint68i/pkg/matrix/matrix_write_tendency.F MITgcm-checkpoint68i/pkg/mdsio/ MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_3D.h MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_WH.h MITgcm-checkpoint68i/pkg/mdsio/MDSIO_OPTIONS.h MITgcm-checkpoint68i/pkg/mdsio/mdsio_ad.flow MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertorl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_check4file.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_facef_read.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl_slice.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rs.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_meta.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_section.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_tape.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_whalos.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_readvec_loc.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_slice.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8torl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8tors.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_segxtorx_2d.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_metafiles.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rl.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rs.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_field.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_meta.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_section.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_tape.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_whalos.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_writelocal.F MITgcm-checkpoint68i/pkg/mdsio/mdsio_writevec_loc.F MITgcm-checkpoint68i/pkg/mnc/ MITgcm-checkpoint68i/pkg/mnc/CPP_OPTIONS.t MITgcm-checkpoint68i/pkg/mnc/MNC_BUFF.h MITgcm-checkpoint68i/pkg/mnc/MNC_COMMON.h MITgcm-checkpoint68i/pkg/mnc/MNC_OPTIONS.h MITgcm-checkpoint68i/pkg/mnc/MNC_PARAMS.h MITgcm-checkpoint68i/pkg/mnc/MNC_SIZE.h MITgcm-checkpoint68i/pkg/mnc/Makefile MITgcm-checkpoint68i/pkg/mnc/PACKAGES_CONFIG.t MITgcm-checkpoint68i/pkg/mnc/README.txt MITgcm-checkpoint68i/pkg/mnc/SIZE.t MITgcm-checkpoint68i/pkg/mnc/TESTING_README.txt MITgcm-checkpoint68i/pkg/mnc/build_netcdf_stubs MITgcm-checkpoint68i/pkg/mnc/mnc_ad.flow MITgcm-checkpoint68i/pkg/mnc/mnc_create_dir.c MITgcm-checkpoint68i/pkg/mnc/mnc_cw_citer.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_cvars.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_fsize.c MITgcm-checkpoint68i/pkg/mnc/mnc_cw_init.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_missingvals.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_model_attr.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_readwrite.template MITgcm-checkpoint68i/pkg/mnc/mnc_cw_udim.F MITgcm-checkpoint68i/pkg/mnc/mnc_cw_write_grid_info.F MITgcm-checkpoint68i/pkg/mnc/mnc_cwrapper.F MITgcm-checkpoint68i/pkg/mnc/mnc_description.tex MITgcm-checkpoint68i/pkg/mnc/mnc_dim.F MITgcm-checkpoint68i/pkg/mnc/mnc_dump.F MITgcm-checkpoint68i/pkg/mnc/mnc_file.F MITgcm-checkpoint68i/pkg/mnc/mnc_grid.F MITgcm-checkpoint68i/pkg/mnc/mnc_init.F MITgcm-checkpoint68i/pkg/mnc/mnc_readparms.F MITgcm-checkpoint68i/pkg/mnc/mnc_test_001.T MITgcm-checkpoint68i/pkg/mnc/mnc_test_002.T MITgcm-checkpoint68i/pkg/mnc/mnc_test_utils.T MITgcm-checkpoint68i/pkg/mnc/mnc_update_time.F MITgcm-checkpoint68i/pkg/mnc/mnc_utils.F MITgcm-checkpoint68i/pkg/mnc/mnc_var.F MITgcm-checkpoint68i/pkg/mnc/parse_local_info MITgcm-checkpoint68i/pkg/mnc/pre-defined_grids.txt MITgcm-checkpoint68i/pkg/mom_common/ MITgcm-checkpoint68i/pkg/mom_common/MOM_COMMON_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_common/MOM_VISC.h MITgcm-checkpoint68i/pkg/mom_common/mom_calc_3d_strain.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_absvort3.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hdiv.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hfacz.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_ke.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_relvort3.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_smag_3d.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_strain.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_tension.F MITgcm-checkpoint68i/pkg/mom_common/mom_calc_visc.F MITgcm-checkpoint68i/pkg/mom_common/mom_common_ad_diff.list MITgcm-checkpoint68i/pkg/mom_common/mom_diagnostics_init.F MITgcm-checkpoint68i/pkg/mom_common/mom_hdissip.F MITgcm-checkpoint68i/pkg/mom_common/mom_init_fixed.F MITgcm-checkpoint68i/pkg/mom_common/mom_quasihydrostatic.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_botdrag_coeff.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_implicit_r.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_rviscflux.F MITgcm-checkpoint68i/pkg/mom_common/mom_u_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_uv_smag_3d.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_botdrag_coeff.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_implicit_r.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_rviscflux.F MITgcm-checkpoint68i/pkg/mom_common/mom_v_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_limit.F MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_stretch.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_coriolis_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_metric_nh.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_sidedrag.F MITgcm-checkpoint68i/pkg/mom_common/mom_w_smag_3d.F MITgcm-checkpoint68i/pkg/mom_fluxform/ MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM.h MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_fluxform/mom_calc_rtrans.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform_ad_diff.list MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_uu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_vu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_wu.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_coriolis.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_del2u.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_cylinder.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_sphere.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_xviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_yviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_uv_boundary.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_uv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_vv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_wv.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_coriolis.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_del2v.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_cylinder.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_sphere.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_xviscflux.F MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_yviscflux.F MITgcm-checkpoint68i/pkg/mom_vecinv/ MITgcm-checkpoint68i/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv_ad_diff.list MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_del2uv.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_hdissip.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_grad_ke.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_vertshear.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_grad_ke.F MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_vertshear.F MITgcm-checkpoint68i/pkg/monitor/ MITgcm-checkpoint68i/pkg/monitor/MONITOR.h MITgcm-checkpoint68i/pkg/monitor/MONITOR_OPTIONS.h MITgcm-checkpoint68i/pkg/monitor/mon_advcfl.F MITgcm-checkpoint68i/pkg/monitor/mon_advcflw.F MITgcm-checkpoint68i/pkg/monitor/mon_advcflw2.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_advcfl.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_description.tex MITgcm-checkpoint68i/pkg/monitor/mon_init.F MITgcm-checkpoint68i/pkg/monitor/mon_ke.F MITgcm-checkpoint68i/pkg/monitor/mon_out.F MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_set_iounit.F MITgcm-checkpoint68i/pkg/monitor/mon_set_pref.F MITgcm-checkpoint68i/pkg/monitor/mon_solution.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_latbnd_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_stats_rs.F MITgcm-checkpoint68i/pkg/monitor/mon_surfcor.F MITgcm-checkpoint68i/pkg/monitor/mon_vort3.F MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rl.F MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rs.F MITgcm-checkpoint68i/pkg/monitor/monitor.F MITgcm-checkpoint68i/pkg/monitor/monitor_ad.F MITgcm-checkpoint68i/pkg/monitor/monitor_ad.flow MITgcm-checkpoint68i/pkg/monitor/monitor_description.tex MITgcm-checkpoint68i/pkg/monitor/monitor_g.F MITgcm-checkpoint68i/pkg/my82/ MITgcm-checkpoint68i/pkg/my82/MY82.h MITgcm-checkpoint68i/pkg/my82/MY82_OPTIONS.h MITgcm-checkpoint68i/pkg/my82/my82_calc.F MITgcm-checkpoint68i/pkg/my82/my82_calc_diff.F MITgcm-checkpoint68i/pkg/my82/my82_calc_visc.F MITgcm-checkpoint68i/pkg/my82/my82_check.F MITgcm-checkpoint68i/pkg/my82/my82_diagnostics_init.F MITgcm-checkpoint68i/pkg/my82/my82_init_fixed.F MITgcm-checkpoint68i/pkg/my82/my82_init_varia.F MITgcm-checkpoint68i/pkg/my82/my82_output.F MITgcm-checkpoint68i/pkg/my82/my82_readparms.F MITgcm-checkpoint68i/pkg/my82/my82_ri_number.F MITgcm-checkpoint68i/pkg/mypackage/ MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE.h MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE_OPTIONS.h MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad.flow MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad_diff.list MITgcm-checkpoint68i/pkg/mypackage/mypackage_calc_rhs.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_check.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_description.tex MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_init.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_state.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_fixed.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_varia.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_mnc_init.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_read_pickup.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_readparms.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_tendency_apply.F MITgcm-checkpoint68i/pkg/mypackage/mypackage_write_pickup.F MITgcm-checkpoint68i/pkg/obcs/ MITgcm-checkpoint68i/pkg/obcs/OBCS_FIELDS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_GRID.h MITgcm-checkpoint68i/pkg/obcs/OBCS_OPTIONS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_PARAMS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_PTRACERS.h MITgcm-checkpoint68i/pkg/obcs/OBCS_SEAICE.h MITgcm-checkpoint68i/pkg/obcs/ORLANSKI.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad.flow MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/obcs/obcs_ad_diff.list MITgcm-checkpoint68i/pkg/obcs/obcs_add_tides.F MITgcm-checkpoint68i/pkg/obcs/obcs_adjust.F MITgcm-checkpoint68i/pkg/obcs/obcs_adjust_uvice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_eta.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ptracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_r_star.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_seaice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_surf_dr.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ts.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uv.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uvice.F MITgcm-checkpoint68i/pkg/obcs/obcs_apply_w.F MITgcm-checkpoint68i/pkg/obcs/obcs_balance_flow.F MITgcm-checkpoint68i/pkg/obcs/obcs_calc.F MITgcm-checkpoint68i/pkg/obcs/obcs_calc_stevens.F MITgcm-checkpoint68i/pkg/obcs/obcs_check.F MITgcm-checkpoint68i/pkg/obcs/obcs_check_depths.F MITgcm-checkpoint68i/pkg/obcs/obcs_copy_tracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_copy_uv_n.F MITgcm-checkpoint68i/pkg/obcs/obcs_description.tex MITgcm-checkpoint68i/pkg/obcs/obcs_diag_balance.F MITgcm-checkpoint68i/pkg/obcs/obcs_exchanges.F MITgcm-checkpoint68i/pkg/obcs/obcs_exf_load.F MITgcm-checkpoint68i/pkg/obcs/obcs_fields_load.F MITgcm-checkpoint68i/pkg/obcs/obcs_init_fixed.F MITgcm-checkpoint68i/pkg/obcs/obcs_init_variables.F MITgcm-checkpoint68i/pkg/obcs/obcs_mon_stats.F MITgcm-checkpoint68i/pkg/obcs/obcs_monitor.F MITgcm-checkpoint68i/pkg/obcs/obcs_output.F MITgcm-checkpoint68i/pkg/obcs/obcs_prescribe_read.F MITgcm-checkpoint68i/pkg/obcs/obcs_read_pickup.F MITgcm-checkpoint68i/pkg/obcs/obcs_readparms.F MITgcm-checkpoint68i/pkg/obcs/obcs_save_uv_n.F MITgcm-checkpoint68i/pkg/obcs/obcs_seaice_sponge.F MITgcm-checkpoint68i/pkg/obcs/obcs_set_connect.F MITgcm-checkpoint68i/pkg/obcs/obcs_sponge.F MITgcm-checkpoint68i/pkg/obcs/obcs_u1_adv_tracer.F MITgcm-checkpoint68i/pkg/obcs/obcs_write_pickup.F MITgcm-checkpoint68i/pkg/obcs/orlanski_east.F MITgcm-checkpoint68i/pkg/obcs/orlanski_init.F MITgcm-checkpoint68i/pkg/obcs/orlanski_north.F MITgcm-checkpoint68i/pkg/obcs/orlanski_south.F MITgcm-checkpoint68i/pkg/obcs/orlanski_west.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_PARAMS.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_TAVE.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCNCPL.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCN_CPL_OPTIONS.h MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_fill.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_init.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_exch_configs.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_export_import_data.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_import_cplparms.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_ini_vars.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init_fixed.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_output.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_readparms.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_register.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_write_pickup.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_apply_import.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_check_cplconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_diags.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_read_pickup.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_data.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_fields.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_ocnconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_atmconfig.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_fields.F MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_store_my_data.F MITgcm-checkpoint68i/pkg/offline/ MITgcm-checkpoint68i/pkg/offline/OFFLINE.h MITgcm-checkpoint68i/pkg/offline/OFFLINE_OPTIONS.h MITgcm-checkpoint68i/pkg/offline/OFFLINE_SWITCH.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/offline/offline_ad_diff.list MITgcm-checkpoint68i/pkg/offline/offline_check.F MITgcm-checkpoint68i/pkg/offline/offline_fields_load.F MITgcm-checkpoint68i/pkg/offline/offline_get_diffus.F MITgcm-checkpoint68i/pkg/offline/offline_init_varia.F MITgcm-checkpoint68i/pkg/offline/offline_readparms.F MITgcm-checkpoint68i/pkg/offline/offline_reset_parms.F MITgcm-checkpoint68i/pkg/openad/ MITgcm-checkpoint68i/pkg/openad/OPENAD_OPTIONS.h MITgcm-checkpoint68i/pkg/openad/ad_s_different_multiple.F MITgcm-checkpoint68i/pkg/openad/ad_s_ifnblnk.F MITgcm-checkpoint68i/pkg/openad/ad_s_ilnblnk.F MITgcm-checkpoint68i/pkg/openad/ad_s_mds_reclen.F MITgcm-checkpoint68i/pkg/openad/externalDummies.F MITgcm-checkpoint68i/pkg/openad/findAndDiff.bash MITgcm-checkpoint68i/pkg/openad/inner_do_loop.F MITgcm-checkpoint68i/pkg/openad/openad_ad_diff.list MITgcm-checkpoint68i/pkg/openad/openad_checkpointInit.F MITgcm-checkpoint68i/pkg/openad/openad_dumpAdjoint.F MITgcm-checkpoint68i/pkg/openad/seawater.F MITgcm-checkpoint68i/pkg/openad/the_model_main.F MITgcm-checkpoint68i/pkg/opps/ MITgcm-checkpoint68i/pkg/opps/OPPS.h MITgcm-checkpoint68i/pkg/opps/OPPS_OPTIONS.h MITgcm-checkpoint68i/pkg/opps/opps_calc.F MITgcm-checkpoint68i/pkg/opps/opps_check.F MITgcm-checkpoint68i/pkg/opps/opps_init.F MITgcm-checkpoint68i/pkg/opps/opps_interface.F MITgcm-checkpoint68i/pkg/opps/opps_readparms.F MITgcm-checkpoint68i/pkg/pkg_depend MITgcm-checkpoint68i/pkg/pkg_groups MITgcm-checkpoint68i/pkg/pp81/ MITgcm-checkpoint68i/pkg/pp81/PP81.h MITgcm-checkpoint68i/pkg/pp81/PP81_OPTIONS.h MITgcm-checkpoint68i/pkg/pp81/pp81_calc.F MITgcm-checkpoint68i/pkg/pp81/pp81_calc_diff.F MITgcm-checkpoint68i/pkg/pp81/pp81_calc_visc.F MITgcm-checkpoint68i/pkg/pp81/pp81_check.F MITgcm-checkpoint68i/pkg/pp81/pp81_diagnostics_init.F MITgcm-checkpoint68i/pkg/pp81/pp81_init_fixed.F MITgcm-checkpoint68i/pkg/pp81/pp81_init_varia.F MITgcm-checkpoint68i/pkg/pp81/pp81_output.F MITgcm-checkpoint68i/pkg/pp81/pp81_readparms.F MITgcm-checkpoint68i/pkg/pp81/pp81_ri_number.F MITgcm-checkpoint68i/pkg/profiles/ MITgcm-checkpoint68i/pkg/profiles/PROFILES_OPTIONS.h MITgcm-checkpoint68i/pkg/profiles/PROFILES_SIZE.h MITgcm-checkpoint68i/pkg/profiles/active_file_control_profiles.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.flow MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_ad.F MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_g.F MITgcm-checkpoint68i/pkg/profiles/cost_profiles.F MITgcm-checkpoint68i/pkg/profiles/profiles.flow MITgcm-checkpoint68i/pkg/profiles/profiles.h MITgcm-checkpoint68i/pkg/profiles/profiles_ad_diff.list MITgcm-checkpoint68i/pkg/profiles/profiles_findunit.F MITgcm-checkpoint68i/pkg/profiles/profiles_ini_io.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_fixed.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_ncfile.F MITgcm-checkpoint68i/pkg/profiles/profiles_init_varia.F MITgcm-checkpoint68i/pkg/profiles/profiles_inloop.F MITgcm-checkpoint68i/pkg/profiles/profiles_interp.F MITgcm-checkpoint68i/pkg/profiles/profiles_readparms.F MITgcm-checkpoint68i/pkg/profiles/profiles_readvector.F MITgcm-checkpoint68i/pkg/ptracers/ MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_FIELDS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_MOD.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_OPTIONS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_PARAMS.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_SIZE.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_START.h MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_TAVE.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad.flow MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_diff.list MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_dump.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_adcommon.h MITgcm-checkpoint68i/pkg/ptracers/ptracers_apply_forcing.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_calc_wsurf_tr.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_check.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_check_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_convect.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_debug.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_init.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_state.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_data_mod.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_mod.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_fields_blocking_exch.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_forcing_surf.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_fixed.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_varia.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_integrate.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_mnc_init.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor_ad.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_output.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_read_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_readparms.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_reset.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_set_iolabel.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_switch_onoff.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_timeave.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_turnoff_io.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_pickup.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_state.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_timeave.F MITgcm-checkpoint68i/pkg/ptracers/ptracers_zonal_filt_apply.F MITgcm-checkpoint68i/pkg/rbcs/ MITgcm-checkpoint68i/pkg/rbcs/RBCS_FIELDS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_OPTIONS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_PARAMS.h MITgcm-checkpoint68i/pkg/rbcs/RBCS_SIZE.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_diff.list MITgcm-checkpoint68i/pkg/rbcs/rbcs_add_tendency.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_fields_load.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_fixed.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_varia.F MITgcm-checkpoint68i/pkg/rbcs/rbcs_readparms.F MITgcm-checkpoint68i/pkg/regrid/ MITgcm-checkpoint68i/pkg/regrid/Makefile MITgcm-checkpoint68i/pkg/regrid/REGRID.h MITgcm-checkpoint68i/pkg/regrid/REGRID_OPTIONS.h MITgcm-checkpoint68i/pkg/regrid/REGRID_SIZE.h MITgcm-checkpoint68i/pkg/regrid/regrid_check.F MITgcm-checkpoint68i/pkg/regrid/regrid_description.tex MITgcm-checkpoint68i/pkg/regrid/regrid_init_fixed.F MITgcm-checkpoint68i/pkg/regrid/regrid_init_varia.F MITgcm-checkpoint68i/pkg/regrid/regrid_mnc_init.F MITgcm-checkpoint68i/pkg/regrid/regrid_readparms.F MITgcm-checkpoint68i/pkg/regrid/regrid_scalar_out.template MITgcm-checkpoint68i/pkg/runclock/ MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK.h MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK_OPTIONS.h MITgcm-checkpoint68i/pkg/runclock/runclock_check.F MITgcm-checkpoint68i/pkg/runclock/runclock_continue.F MITgcm-checkpoint68i/pkg/runclock/runclock_gettime.F MITgcm-checkpoint68i/pkg/runclock/runclock_init.F MITgcm-checkpoint68i/pkg/runclock/runclock_readparms.F MITgcm-checkpoint68i/pkg/rw/ MITgcm-checkpoint68i/pkg/rw/RW_MFLDS.h MITgcm-checkpoint68i/pkg/rw/RW_OPTIONS.h MITgcm-checkpoint68i/pkg/rw/get_write_global_fld.F MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rl.F MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rs.F MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rl.F MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rs.F MITgcm-checkpoint68i/pkg/rw/read_glvec_rl.F MITgcm-checkpoint68i/pkg/rw/read_glvec_rs.F MITgcm-checkpoint68i/pkg/rw/read_mflds.F MITgcm-checkpoint68i/pkg/rw/read_rec.F MITgcm-checkpoint68i/pkg/rw/rw_ad.flow MITgcm-checkpoint68i/pkg/rw/rw_ad_diff.list MITgcm-checkpoint68i/pkg/rw/rw_get_suffix.F MITgcm-checkpoint68i/pkg/rw/set_write_global_fld.F MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rs.F MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rl.F MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rs.F MITgcm-checkpoint68i/pkg/rw/write_glvec_rl.F MITgcm-checkpoint68i/pkg/rw/write_glvec_rs.F MITgcm-checkpoint68i/pkg/rw/write_local_rl.F MITgcm-checkpoint68i/pkg/rw/write_local_rs.F MITgcm-checkpoint68i/pkg/rw/write_rec.F MITgcm-checkpoint68i/pkg/salt_plume/ MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME.h MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME_OPTIONS.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_diff.list MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_apply.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_calc_depth.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_check.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_description.tex MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_fill.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_init.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_do_exch.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_forcing_surf.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_frac.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_fixed.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_varia.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_mnc_init.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_readparms.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_s.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_t.F MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_volfrac.F MITgcm-checkpoint68i/pkg/sbo/ MITgcm-checkpoint68i/pkg/sbo/SBO.h MITgcm-checkpoint68i/pkg/sbo/SBO_OPTIONS.h MITgcm-checkpoint68i/pkg/sbo/sbo_calc.F MITgcm-checkpoint68i/pkg/sbo/sbo_check.F MITgcm-checkpoint68i/pkg/sbo/sbo_description.tex MITgcm-checkpoint68i/pkg/sbo/sbo_output.F MITgcm-checkpoint68i/pkg/sbo/sbo_readparms.F MITgcm-checkpoint68i/pkg/sbo/sbo_rho.F MITgcm-checkpoint68i/pkg/seaice/ MITgcm-checkpoint68i/pkg/seaice/SEAICE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_COST.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_OPTIONS.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_PARAMS.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_SIZE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_TAVE.h MITgcm-checkpoint68i/pkg/seaice/SEAICE_TRACER.h MITgcm-checkpoint68i/pkg/seaice/advect.F MITgcm-checkpoint68i/pkg/seaice/cost_ice_test.F MITgcm-checkpoint68i/pkg/seaice/diffus.F MITgcm-checkpoint68i/pkg/seaice/dynsolver.F MITgcm-checkpoint68i/pkg/seaice/lsr.F MITgcm-checkpoint68i/pkg/seaice/ostres.F MITgcm-checkpoint68i/pkg/seaice/seaice.flow MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/seaice/seaice_ad_diff.list MITgcm-checkpoint68i/pkg/seaice/seaice_ad_dump.F MITgcm-checkpoint68i/pkg/seaice/seaice_advdiff.F MITgcm-checkpoint68i/pkg/seaice/seaice_advection.F MITgcm-checkpoint68i/pkg/seaice/seaice_bottomdrag_coeffs.F MITgcm-checkpoint68i/pkg/seaice/seaice_budget_ocean.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_ice_strength.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_lhs.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_residual.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_rhs.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_strainrates.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_stressdiv.F MITgcm-checkpoint68i/pkg/seaice/seaice_calc_viscosities.F MITgcm-checkpoint68i/pkg/seaice/seaice_check.F MITgcm-checkpoint68i/pkg/seaice/seaice_check_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_accumulate_mean.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_areasst.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_concentration.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_driver.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_export.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_final.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_fixed.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_varia.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sensi.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sss.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sst.F MITgcm-checkpoint68i/pkg/seaice/seaice_cost_weights.F MITgcm-checkpoint68i/pkg/seaice/seaice_ctrl_map_ini.F MITgcm-checkpoint68i/pkg/seaice/seaice_description.tex MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_init.F MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_state.F MITgcm-checkpoint68i/pkg/seaice/seaice_diffusion.F MITgcm-checkpoint68i/pkg/seaice/seaice_do_ridging.F MITgcm-checkpoint68i/pkg/seaice/seaice_dynsolver.F MITgcm-checkpoint68i/pkg/seaice/seaice_evp.F MITgcm-checkpoint68i/pkg/seaice/seaice_fake.F MITgcm-checkpoint68i/pkg/seaice/seaice_fgmres.F MITgcm-checkpoint68i/pkg/seaice/seaice_freedrift.F MITgcm-checkpoint68i/pkg/seaice/seaice_get_dynforcing.F MITgcm-checkpoint68i/pkg/seaice/seaice_growth.F MITgcm-checkpoint68i/pkg/seaice/seaice_growth_adx.F MITgcm-checkpoint68i/pkg/seaice/seaice_init_fixed.F MITgcm-checkpoint68i/pkg/seaice/seaice_init_varia.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_redist.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_remap.F MITgcm-checkpoint68i/pkg/seaice/seaice_itd_sum.F MITgcm-checkpoint68i/pkg/seaice/seaice_jacvec.F MITgcm-checkpoint68i/pkg/seaice/seaice_jfnk.F MITgcm-checkpoint68i/pkg/seaice/seaice_krylov.F MITgcm-checkpoint68i/pkg/seaice/seaice_lsr.F MITgcm-checkpoint68i/pkg/seaice/seaice_map_thsice.F MITgcm-checkpoint68i/pkg/seaice/seaice_mnc_init.F MITgcm-checkpoint68i/pkg/seaice/seaice_model.F MITgcm-checkpoint68i/pkg/seaice/seaice_mom_advection.F MITgcm-checkpoint68i/pkg/seaice/seaice_monitor.F MITgcm-checkpoint68i/pkg/seaice/seaice_monitor_ad.F MITgcm-checkpoint68i/pkg/seaice/seaice_obcs_output.F MITgcm-checkpoint68i/pkg/seaice/seaice_ocean_stress.F MITgcm-checkpoint68i/pkg/seaice/seaice_oceandrag_coeffs.F MITgcm-checkpoint68i/pkg/seaice/seaice_output.F MITgcm-checkpoint68i/pkg/seaice/seaice_preconditioner.F MITgcm-checkpoint68i/pkg/seaice/seaice_prepare_ridging.F MITgcm-checkpoint68i/pkg/seaice/seaice_read_pickup.F MITgcm-checkpoint68i/pkg/seaice/seaice_readparms.F MITgcm-checkpoint68i/pkg/seaice/seaice_reg_ridge.F MITgcm-checkpoint68i/pkg/seaice/seaice_solve4temp.F MITgcm-checkpoint68i/pkg/seaice/seaice_summary.F MITgcm-checkpoint68i/pkg/seaice/seaice_tracer_phys.F MITgcm-checkpoint68i/pkg/seaice/seaice_turnoff_io.F MITgcm-checkpoint68i/pkg/seaice/seaice_write_pickup.F MITgcm-checkpoint68i/pkg/shap_filt/ MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT.h MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT_OPTIONS.h MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_ad_diff.list MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_ts.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_uv.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_computvort.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_diagnostics_init.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_init_fixed.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_readparms.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_relvort3.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s1.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s2.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s4.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracerold.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_u.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s1.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2c.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s4.F MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_v.F MITgcm-checkpoint68i/pkg/shelfice/ MITgcm-checkpoint68i/pkg/shelfice/SHELFICE.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_COST.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_OPTIONS.h MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_TAVE.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_diff.list MITgcm-checkpoint68i/pkg/shelfice/shelfice_check.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_accumulate.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_final.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_shifwflx.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_diagnostics_drag.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing_surf.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_depths.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_fixed.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_varia.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_mask_seaice.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_mnc_init.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_output.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_read_pickup.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_readparms.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_c_mask.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_calc_w.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_state.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_uv_mask.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_remeshing.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_step_icemass.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_thermodynamics.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_u_drag_coeff.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_v_drag_coeff.F MITgcm-checkpoint68i/pkg/shelfice/shelfice_write_pickup.F MITgcm-checkpoint68i/pkg/showflops/ MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS.h MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_INIT.h MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_OPTIONS.h MITgcm-checkpoint68i/pkg/showflops/showflops_ad.flow MITgcm-checkpoint68i/pkg/showflops/showflops_init.F MITgcm-checkpoint68i/pkg/showflops/showflops_inloop.F MITgcm-checkpoint68i/pkg/showflops/showflops_insolve.F MITgcm-checkpoint68i/pkg/smooth/ MITgcm-checkpoint68i/pkg/smooth/SMOOTH.h MITgcm-checkpoint68i/pkg/smooth/SMOOTH_OPTIONS.h MITgcm-checkpoint68i/pkg/smooth/smooth2d.F MITgcm-checkpoint68i/pkg/smooth/smooth3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_ad_diff.list MITgcm-checkpoint68i/pkg/smooth/smooth_basic2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_check.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl2dw.F MITgcm-checkpoint68i/pkg/smooth/smooth_correl3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_description.tex MITgcm-checkpoint68i/pkg/smooth/smooth_diff2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_diff3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_hetero2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_impldiff.F MITgcm-checkpoint68i/pkg/smooth/smooth_init2d.F MITgcm-checkpoint68i/pkg/smooth/smooth_init3d.F MITgcm-checkpoint68i/pkg/smooth/smooth_init_fixed.F MITgcm-checkpoint68i/pkg/smooth/smooth_init_varia.F MITgcm-checkpoint68i/pkg/smooth/smooth_readparms.F MITgcm-checkpoint68i/pkg/smooth/smooth_rhs.F MITgcm-checkpoint68i/pkg/sphere/ MITgcm-checkpoint68i/pkg/sphere/exch_all_2d_rl.F MITgcm-checkpoint68i/pkg/sphere/sphere.F MITgcm-checkpoint68i/pkg/sphere/sphere.h MITgcm-checkpoint68i/pkg/sphere/sphere_ad.flow MITgcm-checkpoint68i/pkg/sphere/sphere_ad_diff.list MITgcm-checkpoint68i/pkg/streamice/ MITgcm-checkpoint68i/pkg/streamice/STREAMICE.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_ADV.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_BDRY.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CG.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CTRL_FLUX.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_OPTIONS.h MITgcm-checkpoint68i/pkg/streamice/STREAMICE_PETSC.h MITgcm-checkpoint68i/pkg/streamice/adstreamice_cg_solve.F MITgcm-checkpoint68i/pkg/streamice/adstreamice_invert_surf_forthick.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_prime_streamice.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice.F MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice_prime.F MITgcm-checkpoint68i/pkg/streamice/phi_gl_streamice.F MITgcm-checkpoint68i/pkg/streamice/slope_limiter.F MITgcm-checkpoint68i/pkg/streamice/streamice.flow MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/streamice/streamice_ad_diff.list MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_x.F MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_y.F MITgcm-checkpoint68i/pkg/streamice/streamice_adv_front.F MITgcm-checkpoint68i/pkg/streamice/streamice_advect_2dtracer.F MITgcm-checkpoint68i/pkg/streamice/streamice_advect_thickness.F MITgcm-checkpoint68i/pkg/streamice/streamice_apply_flux_ctrl.F MITgcm-checkpoint68i/pkg/streamice/streamice_bstress_exponent.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_functions.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_matfree.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_cg_wrapper.F MITgcm-checkpoint68i/pkg/streamice/streamice_check.F MITgcm-checkpoint68i/pkg/streamice/streamice_cost_surf_accum.F MITgcm-checkpoint68i/pkg/streamice/streamice_diagnostics_state.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_fd.F MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_ppm.F MITgcm-checkpoint68i/pkg/streamice/streamice_dump.F MITgcm-checkpoint68i/pkg/streamice/streamice_dump_ad.F MITgcm-checkpoint68i/pkg/streamice/streamice_fields_load.F MITgcm-checkpoint68i/pkg/streamice/streamice_finalize_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_forced_buttress.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_fp_err_oad.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_fp_err.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err.F MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err_oad.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_diagnostics.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_fixed.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_phi.F MITgcm-checkpoint68i/pkg/streamice/streamice_init_varia.F MITgcm-checkpoint68i/pkg/streamice/streamice_initialise_petsc.F MITgcm-checkpoint68i/pkg/streamice/streamice_invert_surf_forthick.F MITgcm-checkpoint68i/pkg/streamice/streamice_petsc_numerate.F MITgcm-checkpoint68i/pkg/streamice/streamice_petscmatdestroy.F MITgcm-checkpoint68i/pkg/streamice/streamice_read_pickup.F MITgcm-checkpoint68i/pkg/streamice/streamice_readparms.F MITgcm-checkpoint68i/pkg/streamice/streamice_taub.F MITgcm-checkpoint68i/pkg/streamice/streamice_timestep.F MITgcm-checkpoint68i/pkg/streamice/streamice_tridiag_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_upd_ffrac_uncoupled.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phi.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phistage.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve.F MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve_openad.F MITgcm-checkpoint68i/pkg/streamice/streamice_velmask_upd.F MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta.F MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta_hybrid.F MITgcm-checkpoint68i/pkg/streamice/streamice_write_pickup.F MITgcm-checkpoint68i/pkg/thsice/ MITgcm-checkpoint68i/pkg/thsice/THSICE_COST.h MITgcm-checkpoint68i/pkg/thsice/THSICE_DEBUG.h MITgcm-checkpoint68i/pkg/thsice/THSICE_OPTIONS.h MITgcm-checkpoint68i/pkg/thsice/THSICE_PARAMS.h MITgcm-checkpoint68i/pkg/thsice/THSICE_SIZE.h MITgcm-checkpoint68i/pkg/thsice/THSICE_TAVE.h MITgcm-checkpoint68i/pkg/thsice/THSICE_VARS.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad.flow MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev1_dir.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev2_dir.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev3_dir.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev4_dir.h MITgcm-checkpoint68i/pkg/thsice/thsice_ad_diff.list MITgcm-checkpoint68i/pkg/thsice/thsice_advdiff.F MITgcm-checkpoint68i/pkg/thsice/thsice_advection.F MITgcm-checkpoint68i/pkg/thsice/thsice_albedo.F MITgcm-checkpoint68i/pkg/thsice/thsice_ave.F MITgcm-checkpoint68i/pkg/thsice/thsice_balance_frw.F MITgcm-checkpoint68i/pkg/thsice/thsice_calc_thickn.F MITgcm-checkpoint68i/pkg/thsice/thsice_check.F MITgcm-checkpoint68i/pkg/thsice/thsice_check_conserv.F MITgcm-checkpoint68i/pkg/thsice/thsice_cost_driver.F MITgcm-checkpoint68i/pkg/thsice/thsice_cost_final.F MITgcm-checkpoint68i/pkg/thsice/thsice_cost_init_varia.F MITgcm-checkpoint68i/pkg/thsice/thsice_cost_test.F MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_init.F MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_state.F MITgcm-checkpoint68i/pkg/thsice/thsice_diffusion.F MITgcm-checkpoint68i/pkg/thsice/thsice_do_advect.F MITgcm-checkpoint68i/pkg/thsice/thsice_do_exch.F MITgcm-checkpoint68i/pkg/thsice/thsice_extend.F MITgcm-checkpoint68i/pkg/thsice/thsice_get_bulkf.F MITgcm-checkpoint68i/pkg/thsice/thsice_get_exf.F MITgcm-checkpoint68i/pkg/thsice/thsice_get_ocean.F MITgcm-checkpoint68i/pkg/thsice/thsice_get_precip.F MITgcm-checkpoint68i/pkg/thsice/thsice_get_velocity.F MITgcm-checkpoint68i/pkg/thsice/thsice_impl_temp.F MITgcm-checkpoint68i/pkg/thsice/thsice_ini_vars.F MITgcm-checkpoint68i/pkg/thsice/thsice_init_fixed.F MITgcm-checkpoint68i/pkg/thsice/thsice_main.F MITgcm-checkpoint68i/pkg/thsice/thsice_map_exf.F MITgcm-checkpoint68i/pkg/thsice/thsice_mnc_init.F MITgcm-checkpoint68i/pkg/thsice/thsice_monitor.F MITgcm-checkpoint68i/pkg/thsice/thsice_output.F MITgcm-checkpoint68i/pkg/thsice/thsice_read_pickup.F MITgcm-checkpoint68i/pkg/thsice/thsice_readparms.F MITgcm-checkpoint68i/pkg/thsice/thsice_reshape_layers.F MITgcm-checkpoint68i/pkg/thsice/thsice_salt_plume.F MITgcm-checkpoint68i/pkg/thsice/thsice_slab_ocean.F MITgcm-checkpoint68i/pkg/thsice/thsice_solve4temp.F MITgcm-checkpoint68i/pkg/thsice/thsice_step_fwd.F MITgcm-checkpoint68i/pkg/thsice/thsice_step_temp.F MITgcm-checkpoint68i/pkg/thsice/thsice_test_addfluid.h MITgcm-checkpoint68i/pkg/thsice/thsice_turnoff_io.F MITgcm-checkpoint68i/pkg/thsice/thsice_write_pickup.F MITgcm-checkpoint68i/pkg/timeave/ MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_OPTIONS.h MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_STATV.h MITgcm-checkpoint68i/pkg/timeave/timeave_ad_diff.list MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1k1t.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1t.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1vfc.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2v.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2vfc.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_dif_1t.F MITgcm-checkpoint68i/pkg/timeave/timeave_cumulate.F MITgcm-checkpoint68i/pkg/timeave/timeave_description.tex MITgcm-checkpoint68i/pkg/timeave/timeave_init_fixed.F MITgcm-checkpoint68i/pkg/timeave/timeave_norma_2v.F MITgcm-checkpoint68i/pkg/timeave/timeave_normalize.F MITgcm-checkpoint68i/pkg/timeave/timeave_reset.F MITgcm-checkpoint68i/pkg/timeave/timeave_statv_write.F MITgcm-checkpoint68i/pkg/timeave/timeave_statvars.F MITgcm-checkpoint68i/pkg/timeave/timeave_surf_flux.F MITgcm-checkpoint68i/pkg/zonal_filt/ MITgcm-checkpoint68i/pkg/zonal_filt/FFTPACK.h MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT.h MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT_OPTIONS.h MITgcm-checkpoint68i/pkg/zonal_filt/fftpack.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_ts.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_uv.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_init.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_nofill.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_postsmooth.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_presmooth.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_readparms.F MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filter.F MITgcm-checkpoint68i/tools/ MITgcm-checkpoint68i/tools/OAD_support/ MITgcm-checkpoint68i/tools/OAD_support/OAD_active.F90 MITgcm-checkpoint68i/tools/OAD_support/OAD_cp.F90 MITgcm-checkpoint68i/tools/OAD_support/OAD_regular_cp.F90 MITgcm-checkpoint68i/tools/OAD_support/OAD_rev.F90 MITgcm-checkpoint68i/tools/OAD_support/OAD_tape.F90 MITgcm-checkpoint68i/tools/OAD_support/ad_inline.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xy.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xyz.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_write_xy.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.dummy_in_stepping.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rl.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rs.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_max_r8.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_r8.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_tile_rl.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.regular.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.revolve.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.sa_cg2d.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.split.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.split_non_anonymous.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_cg_solve.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_fp_err_oad.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_vel_resid_err_oad.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_invert_surf_forthick.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_smooth_adjoint_field.F MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_vel_phistage.F MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.awk MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.csh MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.awk MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.csh MITgcm-checkpoint68i/tools/OAD_support/cb2mUseModules.bash MITgcm-checkpoint68i/tools/OAD_support/dontCompile MITgcm-checkpoint68i/tools/OAD_support/dontTransform MITgcm-checkpoint68i/tools/OAD_support/fixData.sed MITgcm-checkpoint68i/tools/OAD_support/iaddr.c MITgcm-checkpoint68i/tools/OAD_support/insertTemplateDir.bash MITgcm-checkpoint68i/tools/OAD_support/keepOriginal MITgcm-checkpoint68i/tools/OAD_support/revolve.F90 MITgcm-checkpoint68i/tools/OAD_support/stop2print.sed MITgcm-checkpoint68i/tools/OAD_support/strip.sed MITgcm-checkpoint68i/tools/OAD_support/timeRatio.c MITgcm-checkpoint68i/tools/OAD_support/w2f__types.F90 MITgcm-checkpoint68i/tools/ad_taf_output.f.adtrick.diff MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_del1 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MITgcm-checkpoint68i/verification/vermix/input/Qnet_72.forcing MITgcm-checkpoint68i/verification/vermix/input/S.doublediff MITgcm-checkpoint68i/verification/vermix/input/S.init MITgcm-checkpoint68i/verification/vermix/input/T.doublediff MITgcm-checkpoint68i/verification/vermix/input/TKE.init MITgcm-checkpoint68i/verification/vermix/input/T_26.init MITgcm-checkpoint68i/verification/vermix/input/data MITgcm-checkpoint68i/verification/vermix/input/data.diagnostics MITgcm-checkpoint68i/verification/vermix/input/data.kpp MITgcm-checkpoint68i/verification/vermix/input/data.mnc MITgcm-checkpoint68i/verification/vermix/input/data.pkg MITgcm-checkpoint68i/verification/vermix/input/eedata MITgcm-checkpoint68i/verification/vermix/input/gendata.m MITgcm-checkpoint68i/verification/vermix/input/taux_72.forcing MITgcm-checkpoint68i/verification/vermix/input/tr_checklist MITgcm-checkpoint68i/verification/vermix/results/ MITgcm-checkpoint68i/verification/vermix/results/output.dd.txt MITgcm-checkpoint68i/verification/vermix/results/output.ggl90.txt MITgcm-checkpoint68i/verification/vermix/results/output.my82.txt MITgcm-checkpoint68i/verification/vermix/results/output.opps.txt MITgcm-checkpoint68i/verification/vermix/results/output.pp81.txt MITgcm-checkpoint68i/verification/vermix/results/output.txt MITgcm-checkpoint68i/verification/vermix/run/ MITgcm-checkpoint68i/verification/vermix/run/.gitignore [41;37m step #5: BuildMITgcm [0m GENMAKE : A program for GENerating MAKEfiles for the MITgcm project. For a quick list of options, use "genmake2 -h" or for more detail see the documentation, section "Building the model" (under "Getting Started") at: https://mitgcm.readthedocs.io/ === Processing options files and arguments === getting local config information: none found getting OPTFILE information: Warning: no OPTFILE specified so we'll look for possible settings === Searching for possible settings for OPTFILE === The platform appears to be: linux_amd64 The possible FORTRAN compilers found in your path are: gfortran f77 f95 mpif77 Setting OPTFILE to: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran using OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran" get Compiler-version: '12' getting AD_OPTFILE information: using AD_OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/adjoint_options/adjoint_default" check Fortran Compiler... pass (set FC_CHECK=5/5) check makedepend (local: 0, system: 1, 1) Turning on MPI cpp macros === Checking system libraries === Do we have the system() command using mpif77... yes Do we have the fdate() command using mpif77... yes Do we have the etime() command using mpif77... c,r: yes (SbR) Can we call simple C routines (here, "cloc()") using mpif77... yes Can we unlimit the stack size using mpif77... yes Can we register a signal handler using mpif77... yes Can we use stat() through C calls... yes Can we create NetCDF-enabled binaries... no skip check for LAPACK Libs Can we call FLUSH intrinsic subroutine... yes === Setting defaults === Adding MODS directories: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code Making source files in eesupp from templates Making source files in pkg/exch2 from templates Making source files in pkg/regrid from templates === Determining package settings === getting package dependency info from /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_depend getting package groups info from /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_groups checking list of packages to compile: using PKG_LIST="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/packages.conf" before group expansion packages are: gfd obcs shelfice diagnostics timeave replacing "gfd" with: mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor after group expansion packages are: mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor obcs shelfice diagnostics timeave applying DISABLE settings applying ENABLE settings packages are: debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave applying package dependency rules packages are: debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave Adding STANDARDDIRS='eesupp model' Searching for *OPTIONS.h files in order to warn about the presence of "#define "-type statements that are no longer allowed: found CPP_EEOPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h" found CPP_OPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h" Creating the list of files for the adjoint compiler. === Creating the Makefile === setting INCLUDES Determining the list of source and include files Writing makefile: Makefile Add the source list for AD code generation Making list of "exceptions" that need ".p" files Making list of NOOPTFILES Add rules for links Adding makedepend marker === Done === original 'Makefile' generated successfully => next steps: > make depend > make (<-- to generate executable) make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build' if [ ! -L cpl_issm.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/cpl_issm.F cpl_issm.F; fi if [ ! -L do_oceanic_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/do_oceanic_phys.F do_oceanic_phys.F; fi if [ ! -L eeboot_minimal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eeboot_minimal.F eeboot_minimal.F; fi if [ ! -L eedie.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eedie.F eedie.F; fi if [ ! -L chksum_tiled.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/chksum_tiled.F chksum_tiled.F; fi if [ ! -L debug_call.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_call.F debug_call.F; fi if [ ! -L debug_cs_corner_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_cs_corner_uv.F debug_cs_corner_uv.F; fi if [ ! -L debug_enter.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_enter.F debug_enter.F; fi if [ ! -L debug_fld_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rl.F debug_fld_stats_rl.F; fi if [ ! -L debug_fld_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rs.F debug_fld_stats_rs.F; fi if [ ! -L debug_leave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_leave.F debug_leave.F; fi if [ ! -L debug_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_msg.F debug_msg.F; fi if [ ! -L debug_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rl.F debug_stats_rl.F; fi if [ ! -L debug_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rs.F debug_stats_rs.F; fi if [ ! -L fill_in_corners_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/fill_in_corners_rl.F fill_in_corners_rl.F; fi if [ ! -L write_fullarray_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rl.F write_fullarray_rl.F; fi if [ ! -L write_fullarray_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rs.F write_fullarray_rs.F; fi if [ ! -L diag_calc_psivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_calc_psivel.F diag_calc_psivel.F; fi if [ ! -L diag_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_cg2d.F diag_cg2d.F; fi if [ ! -L diagnostics_addtolist.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_addtolist.F diagnostics_addtolist.F; fi if [ ! -L diagnostics_calc_phivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_calc_phivel.F diagnostics_calc_phivel.F; fi if [ ! -L diagnostics_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_check.F diagnostics_check.F; fi if [ ! -L diagnostics_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_clear.F diagnostics_clear.F; fi if [ ! -L diagnostics_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill.F diagnostics_fill.F; fi if [ ! -L diagnostics_fill_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_field.F diagnostics_fill_field.F; fi if [ ! -L diagnostics_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_rs.F diagnostics_fill_rs.F; fi if [ ! -L diagnostics_fill_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_state.F diagnostics_fill_state.F; fi if [ ! -L diagnostics_fract_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fract_fill.F diagnostics_fract_fill.F; fi if [ ! -L diagnostics_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_ini_io.F diagnostics_ini_io.F; fi if [ ! -L diagnostics_init_early.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_early.F diagnostics_init_early.F; fi if [ ! -L diagnostics_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_fixed.F diagnostics_init_fixed.F; fi if [ ! -L diagnostics_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_varia.F diagnostics_init_varia.F; fi if [ ! -L diagnostics_interp_p2p.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_p2p.F diagnostics_interp_p2p.F; fi if [ ! -L diagnostics_interp_vert.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_vert.F diagnostics_interp_vert.F; fi if [ ! -L diagnostics_is_on.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_is_on.F diagnostics_is_on.F; fi if [ ! -L diagnostics_list_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_list_check.F diagnostics_list_check.F; fi if [ ! -L diagnostics_main_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_main_init.F diagnostics_main_init.F; fi if [ ! -L diagnostics_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_mnc_out.F diagnostics_mnc_out.F; fi if [ ! -L diagnostics_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_out.F diagnostics_out.F; fi if [ ! -L diagnostics_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_readparms.F diagnostics_readparms.F; fi if [ ! -L diagnostics_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_read_pickup.F diagnostics_read_pickup.F; fi if [ ! -L diagnostics_scale_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill.F diagnostics_scale_fill.F; fi if [ ! -L diagnostics_scale_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill_rs.F diagnostics_scale_fill_rs.F; fi if [ ! -L diagnostics_set_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_calc.F diagnostics_set_calc.F; fi if [ ! -L diagnostics_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_setdiag.F diagnostics_setdiag.F; fi if [ ! -L diagnostics_set_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_levels.F diagnostics_set_levels.F; fi if [ ! -L diagnostics_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_pointers.F diagnostics_set_pointers.F; fi if [ ! -L diagnostics_status_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_status_error.F diagnostics_status_error.F; fi if [ ! -L diagnostics_sum_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_sum_levels.F diagnostics_sum_levels.F; fi if [ ! -L diagnostics_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_summary.F diagnostics_summary.F; fi if [ ! -L diagnostics_switch_onoff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_switch_onoff.F diagnostics_switch_onoff.F; fi if [ ! -L diagnostics_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_utils.F diagnostics_utils.F; fi if [ ! -L diagnostics_write_adj.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_adj.F diagnostics_write_adj.F; fi if [ ! -L diagnostics_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write.F diagnostics_write.F; fi if [ ! -L diagnostics_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_pickup.F diagnostics_write_pickup.F; fi if [ ! -L diagstats_ascii_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ascii_out.F diagstats_ascii_out.F; fi if [ ! -L diagstats_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_calc.F diagstats_calc.F; fi if [ ! -L diagstats_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_clear.F diagstats_clear.F; fi if [ ! -L diagstats_close_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_close_io.F diagstats_close_io.F; fi if [ ! -L diagstats_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_fill.F diagstats_fill.F; fi if [ ! -L diagstats_global.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_global.F diagstats_global.F; fi if [ ! -L diagstats_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ini_io.F diagstats_ini_io.F; fi if [ ! -L diagstats_local.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_local.F diagstats_local.F; fi if [ ! -L diagstats_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_mnc_out.F diagstats_mnc_out.F; fi if [ ! -L diagstats_others_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_others_calc.F diagstats_others_calc.F; fi if [ ! -L diagstats_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_output.F diagstats_output.F; fi if [ ! -L diagstats_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_setdiag.F diagstats_setdiag.F; fi if [ ! -L diagstats_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_pointers.F diagstats_set_pointers.F; fi if [ ! -L diagstats_set_regions.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_regions.F diagstats_set_regions.F; fi if [ ! -L diag_vegtile_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_vegtile_fill.F diag_vegtile_fill.F; fi if [ ! -L gad_advection.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advection.F gad_advection.F; fi if [ ! -L gad_advscheme.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advscheme.F gad_advscheme.F; fi if [ ! -L gad_biharm_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_r.F gad_biharm_r.F; fi if [ ! -L gad_biharm_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_x.F gad_biharm_x.F; fi if [ ! -L gad_biharm_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_y.F gad_biharm_y.F; fi if [ ! -L gad_c2_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_r.F gad_c2_adv_r.F; fi if [ ! -L gad_c2_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_x.F gad_c2_adv_x.F; fi if [ ! -L gad_c2_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_y.F gad_c2_adv_y.F; fi if [ ! -L gad_c2_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_impl_r.F gad_c2_impl_r.F; fi if [ ! -L gad_c4_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_r.F gad_c4_adv_r.F; fi if [ ! -L gad_c4_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_x.F gad_c4_adv_x.F; fi if [ ! -L gad_c4_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_y.F gad_c4_adv_y.F; fi if [ ! -L gad_calc_rhs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_calc_rhs.F gad_calc_rhs.F; fi if [ ! -L gad_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_check.F gad_check.F; fi if [ ! -L gad_del2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_del2.F gad_del2.F; fi if [ ! -L gad_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_init.F gad_diagnostics_init.F; fi if [ ! -L gad_diagnostics_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_state.F gad_diagnostics_state.F; fi if [ ! -L gad_diff_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_r.F gad_diff_r.F; fi if [ ! -L gad_diff_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_x.F gad_diff_x.F; fi if [ ! -L gad_diff_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_y.F gad_diff_y.F; fi if [ ! -L gad_dst2u1_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_r.F gad_dst2u1_adv_r.F; fi if [ ! -L gad_dst2u1_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_x.F gad_dst2u1_adv_x.F; fi if [ ! -L gad_dst2u1_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_y.F gad_dst2u1_adv_y.F; fi if [ ! -L gad_dst2u1_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_impl_r.F gad_dst2u1_impl_r.F; fi if [ ! -L gad_dst3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_r.F gad_dst3_adv_r.F; fi if [ ! -L gad_dst3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_x.F gad_dst3_adv_x.F; fi if [ ! -L gad_dst3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_y.F gad_dst3_adv_y.F; fi if [ ! -L gad_dst3fl_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_r.F gad_dst3fl_adv_r.F; fi if [ ! -L gad_dst3fl_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_x.F gad_dst3fl_adv_x.F; fi if [ ! -L gad_dst3fl_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_y.F gad_dst3fl_adv_y.F; fi if [ ! -L gad_dst3fl_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_impl_r.F gad_dst3fl_impl_r.F; fi if [ ! -L gad_exch_som.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_exch_som.F gad_exch_som.F; fi if [ ! -L gad_fluxlimit_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_r.F gad_fluxlimit_adv_r.F; fi if [ ! -L gad_fluxlimit_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_x.F gad_fluxlimit_adv_x.F; fi if [ ! -L gad_fluxlimit_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_y.F gad_fluxlimit_adv_y.F; fi if [ ! -L gad_fluxlimit_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_impl_r.F gad_fluxlimit_impl_r.F; fi if [ ! -L gad_grad_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_x.F gad_grad_x.F; fi if [ ! -L gad_grad_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_y.F gad_grad_y.F; fi if [ ! -L gad_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_implicit_r.F gad_implicit_r.F; fi if [ ! -L gad_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_fixed.F gad_init_fixed.F; fi if [ ! -L gad_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_varia.F gad_init_varia.F; fi if [ ! -L gad_os7mp_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_r.F gad_os7mp_adv_r.F; fi if [ ! -L gad_os7mp_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_x.F gad_os7mp_adv_x.F; fi if [ ! -L gad_os7mp_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_y.F gad_os7mp_adv_y.F; fi if [ ! -L gad_osc_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_r.F gad_osc_hat_r.F; fi if [ ! -L gad_osc_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_x.F gad_osc_hat_x.F; fi if [ ! -L gad_osc_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_y.F gad_osc_hat_y.F; fi if [ ! -L gad_osc_mul_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_r.F gad_osc_mul_r.F; fi if [ ! -L gad_osc_mul_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_x.F gad_osc_mul_x.F; fi if [ ! -L gad_osc_mul_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_y.F gad_osc_mul_y.F; fi if [ ! -L gad_plm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_plm_fun.F gad_plm_fun.F; fi if [ ! -L gad_ppm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_r.F gad_ppm_adv_r.F; fi if [ ! -L gad_ppm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_x.F gad_ppm_adv_x.F; fi if [ ! -L gad_ppm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_y.F gad_ppm_adv_y.F; fi if [ ! -L gad_ppm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_r.F gad_ppm_flx_r.F; fi if [ ! -L gad_ppm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_x.F gad_ppm_flx_x.F; fi if [ ! -L gad_ppm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_y.F gad_ppm_flx_y.F; fi if [ ! -L gad_ppm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_fun.F gad_ppm_fun.F; fi if [ ! -L gad_ppm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_r.F gad_ppm_hat_r.F; fi if [ ! -L gad_ppm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_x.F gad_ppm_hat_x.F; fi if [ ! -L gad_ppm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_y.F gad_ppm_hat_y.F; fi if [ ! -L gad_ppm_p3e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_r.F gad_ppm_p3e_r.F; fi if [ ! -L gad_ppm_p3e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_x.F gad_ppm_p3e_x.F; fi if [ ! -L gad_ppm_p3e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_y.F gad_ppm_p3e_y.F; fi if [ ! -L gad_pqm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_r.F gad_pqm_adv_r.F; fi if [ ! -L gad_pqm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_x.F gad_pqm_adv_x.F; fi if [ ! -L gad_pqm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_y.F gad_pqm_adv_y.F; fi if [ ! -L gad_pqm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_r.F gad_pqm_flx_r.F; fi if [ ! -L gad_pqm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_x.F gad_pqm_flx_x.F; fi if [ ! -L gad_pqm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_y.F gad_pqm_flx_y.F; fi if [ ! -L gad_pqm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_fun.F gad_pqm_fun.F; fi if [ ! -L gad_pqm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_r.F gad_pqm_hat_r.F; fi if [ ! -L gad_pqm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_x.F gad_pqm_hat_x.F; fi if [ ! -L gad_pqm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_y.F gad_pqm_hat_y.F; fi if [ ! -L gad_pqm_p5e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_r.F gad_pqm_p5e_r.F; fi if [ ! -L gad_pqm_p5e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_x.F gad_pqm_p5e_x.F; fi if [ ! -L gad_pqm_p5e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_y.F gad_pqm_p5e_y.F; fi if [ ! -L gad_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_read_pickup.F gad_read_pickup.F; fi if [ ! -L gad_som_advect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_advect.F gad_som_advect.F; fi if [ ! -L gad_som_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_r.F gad_som_adv_r.F; fi if [ ! -L gad_som_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_x.F gad_som_adv_x.F; fi if [ ! -L gad_som_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_y.F gad_som_adv_y.F; fi if [ ! -L gad_som_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_exchanges.F gad_som_exchanges.F; fi if [ ! -L gad_som_fill_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_fill_cs_corner.F gad_som_fill_cs_corner.F; fi if [ ! -L gad_som_lim_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_lim_r.F gad_som_lim_r.F; fi if [ ! -L gad_som_prep_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_prep_cs_corner.F gad_som_prep_cs_corner.F; fi if [ ! -L gad_u3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_r.F gad_u3_adv_r.F; fi if [ ! -L gad_u3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_x.F gad_u3_adv_x.F; fi if [ ! -L gad_u3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_y.F gad_u3_adv_y.F; fi if [ ! -L gad_u3c4_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3c4_impl_r.F gad_u3c4_impl_r.F; fi if [ ! -L gad_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_write_pickup.F gad_write_pickup.F; fi if [ ! -L salt_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/salt_fill.F salt_fill.F; fi if [ ! -L mdsio_buffertorl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertorl.F mdsio_buffertorl.F; fi if [ ! -L mdsio_buffertors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertors.F mdsio_buffertors.F; fi if [ ! -L mdsio_check4file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_check4file.F mdsio_check4file.F; fi if [ ! -L mdsio_facef_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_facef_read.F mdsio_facef_read.F; fi if [ ! -L mdsio_gl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl.F mdsio_gl.F; fi if [ ! -L mdsio_gl_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl_slice.F mdsio_gl_slice.F; fi if [ ! -L mdsio_pass_r4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4torl.F mdsio_pass_r4torl.F; fi if [ ! -L mdsio_pass_r4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4tors.F mdsio_pass_r4tors.F; fi if [ ! -L mdsio_pass_r8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8torl.F mdsio_pass_r8torl.F; fi if [ ! -L mdsio_pass_r8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8tors.F mdsio_pass_r8tors.F; fi if [ ! -L mdsio_rd_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rl.F mdsio_rd_rec_rl.F; fi if [ ! -L mdsio_rd_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rs.F mdsio_rd_rec_rs.F; fi if [ ! -L mdsio_read_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_field.F mdsio_read_field.F; fi if [ ! -L mdsio_read_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_meta.F mdsio_read_meta.F; fi if [ ! -L mdsio_read_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_section.F mdsio_read_section.F; fi if [ ! -L mdsio_read_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_tape.F mdsio_read_tape.F; fi if [ ! -L mdsio_readvec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_readvec_loc.F mdsio_readvec_loc.F; fi if [ ! -L mdsio_read_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_whalos.F mdsio_read_whalos.F; fi if [ ! -L mdsio_rw_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_field.F mdsio_rw_field.F; fi if [ ! -L mdsio_rw_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_slice.F mdsio_rw_slice.F; fi if [ ! -L mdsio_seg4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4torl.F mdsio_seg4torl.F; fi if [ ! -L mdsio_seg4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4tors.F mdsio_seg4tors.F; fi if [ ! -L mdsio_seg8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8torl.F mdsio_seg8torl.F; fi if [ ! -L mdsio_seg8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8tors.F mdsio_seg8tors.F; fi if [ ! -L mdsio_segxtorx_2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_segxtorx_2d.F mdsio_segxtorx_2d.F; fi if [ ! -L mdsio_write_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_field.F mdsio_write_field.F; fi if [ ! -L mdsio_writelocal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writelocal.F mdsio_writelocal.F; fi if [ ! -L mdsio_write_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_meta.F mdsio_write_meta.F; fi if [ ! -L mdsio_write_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_section.F mdsio_write_section.F; fi if [ ! -L mdsio_write_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_tape.F mdsio_write_tape.F; fi if [ ! -L mdsio_writevec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writevec_loc.F mdsio_writevec_loc.F; fi if [ ! -L mdsio_write_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_whalos.F mdsio_write_whalos.F; fi if [ ! -L mdsio_wr_metafiles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_metafiles.F mdsio_wr_metafiles.F; fi if [ ! -L mdsio_wr_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rl.F mdsio_wr_rec_rl.F; fi if [ ! -L mdsio_wr_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rs.F mdsio_wr_rec_rs.F; fi if [ ! -L mom_calc_3d_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_3d_strain.F mom_calc_3d_strain.F; fi if [ ! -L mom_calc_absvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_absvort3.F mom_calc_absvort3.F; fi if [ ! -L mom_calc_hdiv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hdiv.F mom_calc_hdiv.F; fi if [ ! -L mom_calc_hfacz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hfacz.F mom_calc_hfacz.F; fi if [ ! -L mom_calc_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_ke.F mom_calc_ke.F; fi if [ ! -L mom_calc_relvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_relvort3.F mom_calc_relvort3.F; fi if [ ! -L mom_calc_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_smag_3d.F mom_calc_smag_3d.F; fi if [ ! -L mom_calc_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_strain.F mom_calc_strain.F; fi if [ ! -L mom_calc_tension.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_tension.F mom_calc_tension.F; fi if [ ! -L mom_calc_visc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_visc.F mom_calc_visc.F; fi if [ ! -L mom_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_diagnostics_init.F mom_diagnostics_init.F; fi if [ ! -L mom_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_hdissip.F mom_hdissip.F; fi if [ ! -L mom_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_init_fixed.F mom_init_fixed.F; fi if [ ! -L mom_quasihydrostatic.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_quasihydrostatic.F mom_quasihydrostatic.F; fi if [ ! -L mom_u_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_botdrag_coeff.F mom_u_botdrag_coeff.F; fi if [ ! -L mom_u_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_coriolis_nh.F mom_u_coriolis_nh.F; fi if [ ! -L mom_u_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_implicit_r.F mom_u_implicit_r.F; fi if [ ! -L mom_u_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_metric_nh.F mom_u_metric_nh.F; fi if [ ! -L mom_u_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_rviscflux.F mom_u_rviscflux.F; fi if [ ! -L mom_u_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_sidedrag.F mom_u_sidedrag.F; fi if [ ! -L mom_uv_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_uv_smag_3d.F mom_uv_smag_3d.F; fi if [ ! -L mom_v_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_botdrag_coeff.F mom_v_botdrag_coeff.F; fi if [ ! -L mom_v_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_coriolis_nh.F mom_v_coriolis_nh.F; fi if [ ! -L mom_v_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_implicit_r.F mom_v_implicit_r.F; fi if [ ! -L mom_visc_qgl_limit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_limit.F mom_visc_qgl_limit.F; fi if [ ! -L mom_visc_qgl_stretch.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_stretch.F mom_visc_qgl_stretch.F; fi if [ ! -L mom_v_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_metric_nh.F mom_v_metric_nh.F; fi if [ ! -L mom_v_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_rviscflux.F mom_v_rviscflux.F; fi if [ ! -L mom_v_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_sidedrag.F mom_v_sidedrag.F; fi if [ ! -L mom_w_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_coriolis_nh.F mom_w_coriolis_nh.F; fi if [ ! -L mom_w_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_metric_nh.F mom_w_metric_nh.F; fi if [ ! -L mom_w_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_sidedrag.F mom_w_sidedrag.F; fi if [ ! -L mom_w_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_smag_3d.F mom_w_smag_3d.F; fi if [ ! -L mom_calc_rtrans.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_calc_rtrans.F mom_calc_rtrans.F; fi if [ ! -L mom_fluxform.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_fluxform.F mom_fluxform.F; fi if [ ! -L mom_u_adv_uu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_uu.F mom_u_adv_uu.F; fi if [ ! -L mom_u_adv_vu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_vu.F mom_u_adv_vu.F; fi if [ ! -L mom_u_adv_wu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_wu.F mom_u_adv_wu.F; fi if [ ! -L mom_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_coriolis.F mom_u_coriolis.F; fi if [ ! -L mom_u_del2u.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_del2u.F mom_u_del2u.F; fi if [ ! -L mom_u_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_cylinder.F mom_u_metric_cylinder.F; fi if [ ! -L mom_u_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_sphere.F mom_u_metric_sphere.F; fi if [ ! -L mom_uv_boundary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_uv_boundary.F mom_uv_boundary.F; fi if [ ! -L mom_u_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_xviscflux.F mom_u_xviscflux.F; fi if [ ! -L mom_u_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_yviscflux.F mom_u_yviscflux.F; fi if [ ! -L mom_v_adv_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_uv.F mom_v_adv_uv.F; fi if [ ! -L mom_v_adv_vv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_vv.F mom_v_adv_vv.F; fi if [ ! -L mom_v_adv_wv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_wv.F mom_v_adv_wv.F; fi if [ ! -L mom_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_coriolis.F mom_v_coriolis.F; fi if [ ! -L mom_v_del2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_del2v.F mom_v_del2v.F; fi if [ ! -L mom_v_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_cylinder.F mom_v_metric_cylinder.F; fi if [ ! -L mom_v_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_sphere.F mom_v_metric_sphere.F; fi if [ ! -L mom_v_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_xviscflux.F mom_v_xviscflux.F; fi if [ ! -L mom_v_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_yviscflux.F mom_v_yviscflux.F; fi if [ ! -L mom_vecinv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vecinv.F mom_vecinv.F; fi if [ ! -L mom_vi_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_coriolis.F mom_vi_coriolis.F; fi if [ ! -L mom_vi_del2uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_del2uv.F mom_vi_del2uv.F; fi if [ ! -L mom_vi_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_hdissip.F mom_vi_hdissip.F; fi if [ ! -L mom_vi_u_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F mom_vi_u_coriolis_c4.F; fi if [ ! -L mom_vi_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis.F mom_vi_u_coriolis.F; fi if [ ! -L mom_vi_u_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_grad_ke.F mom_vi_u_grad_ke.F; fi if [ ! -L mom_vi_u_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_vertshear.F mom_vi_u_vertshear.F; fi if [ ! -L mom_vi_v_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F mom_vi_v_coriolis_c4.F; fi if [ ! -L mom_vi_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis.F mom_vi_v_coriolis.F; fi if [ ! -L mom_vi_v_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_grad_ke.F mom_vi_v_grad_ke.F; fi if [ ! -L mom_vi_v_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_vertshear.F mom_vi_v_vertshear.F; fi if [ ! -L mon_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcfl.F mon_advcfl.F; fi if [ ! -L mon_advcflw2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw2.F mon_advcflw2.F; fi if [ ! -L mon_advcflw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw.F mon_advcflw.F; fi if [ ! -L mon_calc_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_advcfl.F mon_calc_advcfl.F; fi if [ ! -L mon_calc_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rl.F mon_calc_stats_rl.F; fi if [ ! -L mon_calc_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rs.F mon_calc_stats_rs.F; fi if [ ! -L mon_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_init.F mon_init.F; fi if [ ! -L monitor_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_ad.F monitor_ad.F; fi if [ ! -L monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor.F monitor.F; fi if [ ! -L monitor_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_g.F monitor_g.F; fi if [ ! -L mon_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_ke.F mon_ke.F; fi if [ ! -L mon_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_out.F mon_out.F; fi if [ ! -L mon_printstats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rl.F mon_printstats_rl.F; fi if [ ! -L mon_printstats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rs.F mon_printstats_rs.F; fi if [ ! -L mon_set_iounit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_iounit.F mon_set_iounit.F; fi if [ ! -L mon_set_pref.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_pref.F mon_set_pref.F; fi if [ ! -L mon_solution.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_solution.F mon_solution.F; fi if [ ! -L mon_stats_latbnd_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_latbnd_rl.F mon_stats_latbnd_rl.F; fi if [ ! -L mon_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rl.F mon_stats_rl.F; fi if [ ! -L mon_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rs.F mon_stats_rs.F; fi if [ ! -L mon_surfcor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_surfcor.F mon_surfcor.F; fi if [ ! -L mon_vort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_vort3.F mon_vort3.F; fi if [ ! -L mon_writestats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rl.F mon_writestats_rl.F; fi if [ ! -L mon_writestats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rs.F mon_writestats_rs.F; fi if [ ! -L obcs_add_tides.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_add_tides.F obcs_add_tides.F; fi if [ ! -L obcs_adjust.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust.F obcs_adjust.F; fi if [ ! -L obcs_adjust_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust_uvice.F obcs_adjust_uvice.F; fi if [ ! -L obcs_apply_eta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_eta.F obcs_apply_eta.F; fi if [ ! -L obcs_apply_ptracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ptracer.F obcs_apply_ptracer.F; fi if [ ! -L obcs_apply_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_r_star.F obcs_apply_r_star.F; fi if [ ! -L obcs_apply_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_seaice.F obcs_apply_seaice.F; fi if [ ! -L obcs_apply_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_surf_dr.F obcs_apply_surf_dr.F; fi if [ ! -L obcs_apply_ts.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ts.F obcs_apply_ts.F; fi if [ ! -L obcs_apply_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uv.F obcs_apply_uv.F; fi if [ ! -L obcs_apply_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uvice.F obcs_apply_uvice.F; fi if [ ! -L obcs_apply_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_w.F obcs_apply_w.F; fi if [ ! -L obcs_balance_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_balance_flow.F obcs_balance_flow.F; fi if [ ! -L obcs_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc.F obcs_calc.F; fi if [ ! -L obcs_calc_stevens.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc_stevens.F obcs_calc_stevens.F; fi if [ ! -L obcs_check_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check_depths.F obcs_check_depths.F; fi if [ ! -L obcs_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check.F obcs_check.F; fi if [ ! -L obcs_copy_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_tracer.F obcs_copy_tracer.F; fi if [ ! -L obcs_copy_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_uv_n.F obcs_copy_uv_n.F; fi if [ ! -L obcs_diag_balance.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_diag_balance.F obcs_diag_balance.F; fi if [ ! -L obcs_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exchanges.F obcs_exchanges.F; fi if [ ! -L obcs_exf_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exf_load.F obcs_exf_load.F; fi if [ ! -L obcs_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_fields_load.F obcs_fields_load.F; fi if [ ! -L obcs_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_fixed.F obcs_init_fixed.F; fi if [ ! -L obcs_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_variables.F obcs_init_variables.F; fi if [ ! -L obcs_monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_monitor.F obcs_monitor.F; fi if [ ! -L obcs_mon_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_mon_stats.F obcs_mon_stats.F; fi if [ ! -L obcs_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_output.F obcs_output.F; fi if [ ! -L obcs_prescribe_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_prescribe_read.F obcs_prescribe_read.F; fi if [ ! -L obcs_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_readparms.F obcs_readparms.F; fi if [ ! -L obcs_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_read_pickup.F obcs_read_pickup.F; fi if [ ! -L obcs_save_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_save_uv_n.F obcs_save_uv_n.F; fi if [ ! -L obcs_seaice_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_seaice_sponge.F obcs_seaice_sponge.F; fi if [ ! -L obcs_set_connect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_set_connect.F obcs_set_connect.F; fi if [ ! -L obcs_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_sponge.F obcs_sponge.F; fi if [ ! -L obcs_u1_adv_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_u1_adv_tracer.F obcs_u1_adv_tracer.F; fi if [ ! -L obcs_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_write_pickup.F obcs_write_pickup.F; fi if [ ! -L orlanski_east.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_east.F orlanski_east.F; fi if [ ! -L orlanski_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_init.F orlanski_init.F; fi if [ ! -L orlanski_north.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_north.F orlanski_north.F; fi if [ ! -L orlanski_south.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_south.F orlanski_south.F; fi if [ ! -L orlanski_west.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_west.F orlanski_west.F; fi if [ ! -L get_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/get_write_global_fld.F get_write_global_fld.F; fi if [ ! -L read_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rl.F read_fld_xy_rl.F; fi if [ ! -L read_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rs.F read_fld_xy_rs.F; fi if [ ! -L read_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rl.F read_fld_xyz_rl.F; fi if [ ! -L read_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rs.F read_fld_xyz_rs.F; fi if [ ! -L read_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rl.F read_glvec_rl.F; fi if [ ! -L read_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rs.F read_glvec_rs.F; fi if [ ! -L read_mflds.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_mflds.F read_mflds.F; fi if [ ! -L read_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_rec.F read_rec.F; fi if [ ! -L rw_get_suffix.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/rw_get_suffix.F rw_get_suffix.F; fi if [ ! -L set_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/set_write_global_fld.F set_write_global_fld.F; fi if [ ! -L write_fld_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rl.F write_fld_3d_rl.F; fi if [ ! -L write_fld_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rs.F write_fld_3d_rs.F; fi if [ ! -L write_fld_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rl.F write_fld_s3d_rl.F; fi if [ ! -L write_fld_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rs.F write_fld_s3d_rs.F; fi if [ ! -L write_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rl.F write_fld_xy_rl.F; fi if [ ! -L write_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rs.F write_fld_xy_rs.F; fi if [ ! -L write_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rl.F write_fld_xyz_rl.F; fi if [ ! -L write_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rs.F write_fld_xyz_rs.F; fi if [ ! -L write_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rl.F write_glvec_rl.F; fi if [ ! -L write_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rs.F write_glvec_rs.F; fi if [ ! -L write_local_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rl.F write_local_rl.F; fi if [ ! -L write_local_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rs.F write_local_rs.F; fi if [ ! -L write_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_rec.F write_rec.F; fi if [ ! -L shelfice_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_check.F shelfice_check.F; fi if [ ! -L shelfice_cost_accumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_accumulate.F shelfice_cost_accumulate.F; fi if [ ! -L shelfice_cost_final.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_final.F shelfice_cost_final.F; fi if [ ! -L shelfice_cost_shifwflx.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_shifwflx.F shelfice_cost_shifwflx.F; fi if [ ! -L shelfice_diagnostics_drag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_diagnostics_drag.F shelfice_diagnostics_drag.F; fi if [ ! -L shelfice_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing.F shelfice_forcing.F; fi if [ ! -L shelfice_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing_surf.F shelfice_forcing_surf.F; fi if [ ! -L shelfice_init_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_depths.F shelfice_init_depths.F; fi if [ ! -L shelfice_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_fixed.F shelfice_init_fixed.F; fi if [ ! -L shelfice_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_varia.F shelfice_init_varia.F; fi if [ ! -L shelfice_mask_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mask_seaice.F shelfice_mask_seaice.F; fi if [ ! -L shelfice_mnc_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mnc_init.F shelfice_mnc_init.F; fi if [ ! -L shelfice_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_output.F shelfice_output.F; fi if [ ! -L shelfice_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_readparms.F shelfice_readparms.F; fi if [ ! -L shelfice_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_read_pickup.F shelfice_read_pickup.F; fi if [ ! -L shelfice_remesh_calc_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_calc_w.F shelfice_remesh_calc_w.F; fi if [ ! -L shelfice_remesh_c_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_c_mask.F shelfice_remesh_c_mask.F; fi if [ ! -L shelfice_remeshing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remeshing.F shelfice_remeshing.F; fi if [ ! -L shelfice_remesh_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_state.F shelfice_remesh_state.F; fi if [ ! -L shelfice_remesh_uv_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_uv_mask.F shelfice_remesh_uv_mask.F; fi if [ ! -L shelfice_step_icemass.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_step_icemass.F shelfice_step_icemass.F; fi if [ ! -L shelfice_thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_thermodynamics.F shelfice_thermodynamics.F; fi if [ ! -L shelfice_u_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_u_drag_coeff.F shelfice_u_drag_coeff.F; fi if [ ! -L shelfice_v_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_v_drag_coeff.F shelfice_v_drag_coeff.F; fi if [ ! -L shelfice_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_write_pickup.F shelfice_write_pickup.F; fi if [ ! -L timeave_cumul_1k1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1k1t.F timeave_cumul_1k1t.F; fi if [ ! -L timeave_cumul_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1t.F timeave_cumul_1t.F; fi if [ ! -L timeave_cumul_1vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1vfc.F timeave_cumul_1vfc.F; fi if [ ! -L timeave_cumul_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2v.F timeave_cumul_2v.F; fi if [ ! -L timeave_cumul_2vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2vfc.F timeave_cumul_2vfc.F; fi if [ ! -L timeave_cumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumulate.F timeave_cumulate.F; fi if [ ! -L timeave_cumul_dif_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_dif_1t.F timeave_cumul_dif_1t.F; fi if [ ! -L timeave_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_init_fixed.F timeave_init_fixed.F; fi if [ ! -L timeave_norma_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_norma_2v.F timeave_norma_2v.F; fi if [ ! -L timeave_normalize.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_normalize.F timeave_normalize.F; fi if [ ! -L timeave_reset.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_reset.F timeave_reset.F; fi if [ ! -L timeave_statvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statvars.F timeave_statvars.F; fi if [ ! -L timeave_statv_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statv_write.F timeave_statv_write.F; fi if [ ! -L timeave_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_surf_flux.F timeave_surf_flux.F; fi if [ ! -L all_proc_die.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/all_proc_die.F all_proc_die.F; fi if [ ! -L bar2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar2.F bar2.F; fi if [ ! -L bar_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar_check.F bar_check.F; fi if [ ! -L barrier.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/barrier.F barrier.F; fi if [ ! -L check_threads.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/check_threads.F check_threads.F; fi if [ ! -L comm_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/comm_stats.F comm_stats.F; fi if [ ! -L cumulsum_z_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/cumulsum_z_tile.F cumulsum_z_tile.F; fi if [ ! -L different_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/different_multiple.F different_multiple.F; fi if [ ! -L diff_phase_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/diff_phase_multiple.F diff_phase_multiple.F; fi if [ ! -L eeboot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeboot.F eeboot.F; fi if [ ! -L eedata_example.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eedata_example.F eedata_example.F; fi if [ ! -L eeintro_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeintro_msg.F eeintro_msg.F; fi if [ ! -L eeset_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeset_parms.F eeset_parms.F; fi if [ ! -L eewrite_eeenv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eewrite_eeenv.F eewrite_eeenv.F; fi if [ ! -L exch0_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r4.F exch0_r4.F; fi if [ ! -L exch0_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r8.F exch0_r8.F; fi if [ ! -L exch0_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rl.F exch0_rl.F; fi if [ ! -L exch0_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rs.F exch0_rs.F; fi if [ ! -L exch1_bg_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r4_cube.F exch1_bg_r4_cube.F; fi if [ ! -L exch1_bg_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r8_cube.F exch1_bg_r8_cube.F; fi if [ ! -L exch1_bg_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rl_cube.F exch1_bg_rl_cube.F; fi if [ ! -L exch1_bg_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rs_cube.F exch1_bg_rs_cube.F; fi if [ ! -L exch1_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4_cube.F exch1_r4_cube.F; fi if [ ! -L exch1_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4.F exch1_r4.F; fi if [ ! -L exch1_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8_cube.F exch1_r8_cube.F; fi if [ ! -L exch1_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8.F exch1_r8.F; fi if [ ! -L exch1_rl_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_ad.F exch1_rl_ad.F; fi if [ ! -L exch1_rl_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube_ad.F exch1_rl_cube_ad.F; fi if [ ! -L exch1_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube.F exch1_rl_cube.F; fi if [ ! -L exch1_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl.F exch1_rl.F; fi if [ ! -L exch1_rs_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_ad.F exch1_rs_ad.F; fi if [ ! -L exch1_rs_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube_ad.F exch1_rs_cube_ad.F; fi if [ ! -L exch1_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube.F exch1_rs_cube.F; fi if [ ! -L exch1_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs.F exch1_rs.F; fi if [ ! -L exch1_uv_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r4_cube.F exch1_uv_r4_cube.F; fi if [ ! -L exch1_uv_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r8_cube.F exch1_uv_r8_cube.F; fi if [ ! -L exch1_uv_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rl_cube.F exch1_uv_rl_cube.F; fi if [ ! -L exch1_uv_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rs_cube.F exch1_uv_rs_cube.F; fi if [ ! -L exch1_z_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r4_cube.F exch1_z_r4_cube.F; fi if [ ! -L exch1_z_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r8_cube.F exch1_z_r8_cube.F; fi if [ ! -L exch1_z_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rl_cube.F exch1_z_rl_cube.F; fi if [ ! -L exch1_z_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rs_cube.F exch1_z_rs_cube.F; fi if [ ! -L exch_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r4.F exch_3d_r4.F; fi if [ ! -L exch_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r8.F exch_3d_r8.F; fi if [ ! -L exch_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rl.F exch_3d_rl.F; fi if [ ! -L exch_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rs.F exch_3d_rs.F; fi if [ ! -L exch_cycle_ebl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_cycle_ebl.F exch_cycle_ebl.F; fi if [ ! -L exch_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_init.F exch_init.F; fi if [ ! -L exch_r4_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_x.F exch_r4_recv_get_x.F; fi if [ ! -L exch_r4_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_y.F exch_r4_recv_get_y.F; fi if [ ! -L exch_r4_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_x.F exch_r4_send_put_x.F; fi if [ ! -L exch_r4_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_y.F exch_r4_send_put_y.F; fi if [ ! -L exch_r8_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_x.F exch_r8_recv_get_x.F; fi if [ ! -L exch_r8_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_y.F exch_r8_recv_get_y.F; fi if [ ! -L exch_r8_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_x.F exch_r8_send_put_x.F; fi if [ ! -L exch_r8_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_y.F exch_r8_send_put_y.F; fi if [ ! -L exch_rl_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_x.F exch_rl_recv_get_x.F; fi if [ ! -L exch_rl_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_y.F exch_rl_recv_get_y.F; fi if [ ! -L exch_rl_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_x.F exch_rl_send_put_x.F; fi if [ ! -L exch_rl_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_y.F exch_rl_send_put_y.F; fi if [ ! -L exch_rs_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_x.F exch_rs_recv_get_x.F; fi if [ ! -L exch_rs_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_y.F exch_rs_recv_get_y.F; fi if [ ! -L exch_rs_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_x.F exch_rs_send_put_x.F; fi if [ ! -L exch_rs_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_y.F exch_rs_send_put_y.F; fi if [ ! -L exch_s3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r4.F exch_s3d_r4.F; fi if [ ! -L exch_s3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r8.F exch_s3d_r8.F; fi if [ ! -L exch_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rl.F exch_s3d_rl.F; fi if [ ! -L exch_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rs.F exch_s3d_rs.F; fi if [ ! -L exch_sm_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r4.F exch_sm_3d_r4.F; fi if [ ! -L exch_sm_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r8.F exch_sm_3d_r8.F; fi if [ ! -L exch_sm_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rl.F exch_sm_3d_rl.F; fi if [ ! -L exch_sm_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rs.F exch_sm_3d_rs.F; fi if [ ! -L exch_uv_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r4.F exch_uv_3d_r4.F; fi if [ ! -L exch_uv_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r8.F exch_uv_3d_r8.F; fi if [ ! -L exch_uv_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rl.F exch_uv_3d_rl.F; fi if [ ! -L exch_uv_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rs.F exch_uv_3d_rs.F; fi if [ ! -L exch_uv_agrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r4.F; fi if [ ! -L exch_uv_agrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_r8.F; fi if [ ! -L exch_uv_agrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rl.F; fi if [ ! -L exch_uv_agrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rs.F exch_uv_agrid_3d_rs.F; fi if [ ! -L exch_uv_bgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r4.F; fi if [ ! -L exch_uv_bgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_r8.F; fi if [ ! -L exch_uv_bgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rl.F; fi if [ ! -L exch_uv_bgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rs.F exch_uv_bgrid_3d_rs.F; fi if [ ! -L exch_uv_dgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r4.F; fi if [ ! -L exch_uv_dgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_r8.F; fi if [ ! -L exch_uv_dgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rl.F; fi if [ ! -L exch_uv_dgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rs.F exch_uv_dgrid_3d_rs.F; fi if [ ! -L exch_uv_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r4.F exch_uv_xy_r4.F; fi if [ ! -L exch_uv_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r8.F exch_uv_xy_r8.F; fi if [ ! -L exch_uv_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rl.F exch_uv_xy_rl.F; fi if [ ! -L exch_uv_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rs.F exch_uv_xy_rs.F; fi if [ ! -L exch_uv_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r4.F exch_uv_xyz_r4.F; fi if [ ! -L exch_uv_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r8.F exch_uv_xyz_r8.F; fi if [ ! -L exch_uv_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rl.F exch_uv_xyz_rl.F; fi if [ ! -L exch_uv_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rs.F exch_uv_xyz_rs.F; fi if [ ! -L exch_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r4.F exch_xy_r4.F; fi if [ ! -L exch_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r8.F exch_xy_r8.F; fi if [ ! -L exch_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rl.F exch_xy_rl.F; fi if [ ! -L exch_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rs.F exch_xy_rs.F; fi if [ ! -L exch_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r4.F exch_xyz_r4.F; fi if [ ! -L exch_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r8.F exch_xyz_r8.F; fi if [ ! -L exch_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rl.F exch_xyz_rl.F; fi if [ ! -L exch_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rs.F exch_xyz_rs.F; fi if [ ! -L exch_z_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r4.F exch_z_3d_r4.F; fi if [ ! -L exch_z_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r8.F exch_z_3d_r8.F; fi if [ ! -L exch_z_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rl.F exch_z_3d_rl.F; fi if [ ! -L exch_z_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rs.F exch_z_3d_rs.F; fi if [ ! -L fill_cs_corner_ag_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_ag_rl.F fill_cs_corner_ag_rl.F; fi if [ ! -L fill_cs_corner_tr_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_tr_rl.F fill_cs_corner_tr_rl.F; fi if [ ! -L fill_cs_corner_uv_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rl.F fill_cs_corner_uv_rl.F; fi if [ ! -L fill_cs_corner_uv_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rs.F fill_cs_corner_uv_rs.F; fi if [ ! -L fool_the_compiler.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fool_the_compiler.F fool_the_compiler.F; fi if [ ! -L gather_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r4.F gather_2d_r4.F; fi if [ ! -L gather_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r8.F gather_2d_r8.F; fi if [ ! -L gather_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r4.F gather_2d_wh_r4.F; fi if [ ! -L gather_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r8.F gather_2d_wh_r8.F; fi if [ ! -L gather_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r4.F gather_vec_r4.F; fi if [ ! -L gather_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r8.F gather_vec_r8.F; fi if [ ! -L gather_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_xz.F gather_xz.F; fi if [ ! -L gather_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_yz.F gather_yz.F; fi if [ ! -L get_periodic_interval.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/get_periodic_interval.F get_periodic_interval.F; fi if [ ! -L global_max.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_max.F global_max.F; fi if [ ! -L global_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum.F global_sum.F; fi if [ ! -L global_sum_singlecpu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_singlecpu.F global_sum_singlecpu.F; fi if [ ! -L global_sum_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_tile.F global_sum_tile.F; fi if [ ! -L global_vec_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_vec_sum.F global_vec_sum.F; fi if [ ! -L gsum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsum.F gsum.F; fi if [ ! -L ini_communication_patterns.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_communication_patterns.F ini_communication_patterns.F; fi if [ ! -L ini_procs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_procs.F ini_procs.F; fi if [ ! -L ini_threading_environment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_threading_environment.F ini_threading_environment.F; fi if [ ! -L lef_zero.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/lef_zero.F lef_zero.F; fi if [ ! -L main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/main.F main.F; fi if [ ! -L master_cpu_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_io.F master_cpu_io.F; fi if [ ! -L master_cpu_thread.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_thread.F master_cpu_thread.F; fi if [ ! -L mds_byteswapi4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapi4.F mds_byteswapi4.F; fi if [ ! -L mds_byteswapr4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr4.F mds_byteswapr4.F; fi if [ ! -L mds_byteswapr8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr8.F mds_byteswapr8.F; fi if [ ! -L mdsfindunit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mdsfindunit.F mdsfindunit.F; fi if [ ! -L mds_flush.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_flush.F mds_flush.F; fi if [ ! -L mds_reclen.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_reclen.F mds_reclen.F; fi if [ ! -L memsync.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/memsync.F memsync.F; fi if [ ! -L nml_change_syntax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_change_syntax.F nml_change_syntax.F; fi if [ ! -L nml_set_terminator.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_set_terminator.F nml_set_terminator.F; fi if [ ! -L open_copy_data_file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/open_copy_data_file.F open_copy_data_file.F; fi if [ ! -L print.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/print.F print.F; fi if [ ! -L reset_halo.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/reset_halo.F reset_halo.F; fi if [ ! -L scatter_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r4.F scatter_2d_r4.F; fi if [ ! -L scatter_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r8.F scatter_2d_r8.F; fi if [ ! -L scatter_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r4.F scatter_2d_wh_r4.F; fi if [ ! -L scatter_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r8.F scatter_2d_wh_r8.F; fi if [ ! -L scatter_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r4.F scatter_vec_r4.F; fi if [ ! -L scatter_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r8.F scatter_vec_r8.F; fi if [ ! -L scatter_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_xz.F scatter_xz.F; fi if [ ! -L scatter_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_yz.F scatter_yz.F; fi if [ ! -L stop_if_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/stop_if_error.F stop_if_error.F; fi if [ ! -L timers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timers.F timers.F; fi if [ ! -L utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/utils.F utils.F; fi if [ ! -L write_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/write_utils.F write_utils.F; fi if [ ! -L adams_bashforth2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth2.F adams_bashforth2.F; fi if [ ! -L adams_bashforth3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth3.F adams_bashforth3.F; fi if [ ! -L add_walls2masks.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/add_walls2masks.F add_walls2masks.F; fi if [ ! -L apply_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/apply_forcing.F apply_forcing.F; fi if [ ! -L calc_3d_diffusivity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_3d_diffusivity.F calc_3d_diffusivity.F; fi if [ ! -L calc_adv_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_adv_flow.F calc_adv_flow.F; fi if [ ! -L calc_div_ghat.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_div_ghat.F calc_div_ghat.F; fi if [ ! -L calc_eddy_stress.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_eddy_stress.F calc_eddy_stress.F; fi if [ ! -L calc_grad_phi_fv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_fv.F calc_grad_phi_fv.F; fi if [ ! -L calc_grad_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_hyd.F calc_grad_phi_hyd.F; fi if [ ! -L calc_grad_phi_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_surf.F calc_grad_phi_surf.F; fi if [ ! -L calc_grid_angles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grid_angles.F calc_grid_angles.F; fi if [ ! -L calc_gw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_gw.F calc_gw.F; fi if [ ! -L calc_ivdc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_ivdc.F calc_ivdc.F; fi if [ ! -L calc_oce_mxlayer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_oce_mxlayer.F calc_oce_mxlayer.F; fi if [ ! -L calc_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_phi_hyd.F calc_phi_hyd.F; fi if [ ! -L calc_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_r_star.F calc_r_star.F; fi if [ ! -L calc_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_surf_dr.F calc_surf_dr.F; fi if [ ! -L calc_viscosity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_viscosity.F calc_viscosity.F; fi if [ ! -L calc_wsurf_tr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_wsurf_tr.F calc_wsurf_tr.F; fi if [ ! -L cg2d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_ex0.F cg2d_ex0.F; fi if [ ! -L cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d.F cg2d.F; fi if [ ! -L cg2d_nsa.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_nsa.F cg2d_nsa.F; fi if [ ! -L cg2d_sr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_sr.F cg2d_sr.F; fi if [ ! -L cg3d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d_ex0.F cg3d_ex0.F; fi if [ ! -L cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d.F cg3d.F; fi if [ ! -L check_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/check_pickup.F check_pickup.F; fi if [ ! -L config_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_check.F config_check.F; fi if [ ! -L config_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_summary.F config_summary.F; fi if [ ! -L convective_adjustment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment.F convective_adjustment.F; fi if [ ! -L convective_adjustment_ini.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment_ini.F convective_adjustment_ini.F; fi if [ ! -L convectively_mixtracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convectively_mixtracer.F convectively_mixtracer.F; fi if [ ! -L convective_weights.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_weights.F convective_weights.F; fi if [ ! -L correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/correction_step.F correction_step.F; fi if [ ! -L cycle_ab_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_ab_tracer.F cycle_ab_tracer.F; fi if [ ! -L cycle_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_tracer.F cycle_tracer.F; fi if [ ! -L diags_oceanic_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_oceanic_surf_flux.F diags_oceanic_surf_flux.F; fi if [ ! -L diags_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_hyd.F diags_phi_hyd.F; fi if [ ! -L diags_phi_rlow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_rlow.F diags_phi_rlow.F; fi if [ ! -L diags_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_rho.F diags_rho.F; fi if [ ! -L diags_sound_speed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_sound_speed.F diags_sound_speed.F; fi if [ ! -L do_atmospheric_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_atmospheric_phys.F do_atmospheric_phys.F; fi if [ ! -L do_fields_blocking_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_fields_blocking_exchanges.F do_fields_blocking_exchanges.F; fi if [ ! -L do_stagger_fields_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_stagger_fields_exchanges.F do_stagger_fields_exchanges.F; fi if [ ! -L do_statevars_diags.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_diags.F do_statevars_diags.F; fi if [ ! -L do_statevars_tave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_tave.F do_statevars_tave.F; fi if [ ! -L do_the_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_the_model_io.F do_the_model_io.F; fi if [ ! -L do_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_write_pickup.F do_write_pickup.F; fi if [ ! -L dynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/dynamics.F dynamics.F; fi if [ ! -L external_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_fields_load.F external_fields_load.F; fi if [ ! -L external_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing.F external_forcing.F; fi if [ ! -L external_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing_surf.F external_forcing_surf.F; fi if [ ! -L find_alpha.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_alpha.F find_alpha.F; fi if [ ! -L find_hyd_press_1d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_hyd_press_1d.F find_hyd_press_1d.F; fi if [ ! -L find_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_rho.F find_rho.F; fi if [ ! -L forcing_surf_relax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forcing_surf_relax.F forcing_surf_relax.F; fi if [ ! -L forward_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forward_step.F forward_step.F; fi if [ ! -L freesurf_rescale_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freesurf_rescale_g.F freesurf_rescale_g.F; fi if [ ! -L freeze_surface.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freeze_surface.F freeze_surface.F; fi if [ ! -L grad_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/grad_sigma.F grad_sigma.F; fi if [ ! -L gsw_teos10.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/gsw_teos10.F gsw_teos10.F; fi if [ ! -L impldiff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/impldiff.F impldiff.F; fi if [ ! -L ini_cartesian_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cartesian_grid.F ini_cartesian_grid.F; fi if [ ! -L ini_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg2d.F ini_cg2d.F; fi if [ ! -L ini_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg3d.F ini_cg3d.F; fi if [ ! -L ini_cori.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cori.F ini_cori.F; fi if [ ! -L ini_curvilinear_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_curvilinear_grid.F ini_curvilinear_grid.F; fi if [ ! -L ini_cylinder_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cylinder_grid.F ini_cylinder_grid.F; fi if [ ! -L ini_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_depths.F ini_depths.F; fi if [ ! -L ini_dynvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_dynvars.F ini_dynvars.F; fi if [ ! -L ini_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_eos.F ini_eos.F; fi if [ ! -L ini_ffields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_ffields.F ini_ffields.F; fi if [ ! -L ini_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_fields.F ini_fields.F; fi if [ ! -L ini_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_forcing.F ini_forcing.F; fi if [ ! -L ini_global_domain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_global_domain.F ini_global_domain.F; fi if [ ! -L ini_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_grid.F ini_grid.F; fi if [ ! -L ini_linear_phisurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_linear_phisurf.F ini_linear_phisurf.F; fi if [ ! -L ini_local_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_local_grid.F ini_local_grid.F; fi if [ ! -L ini_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_masks_etc.F ini_masks_etc.F; fi if [ ! -L ini_mixing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mixing.F ini_mixing.F; fi if [ ! -L ini_mnc_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mnc_vars.F ini_mnc_vars.F; fi if [ ! -L ini_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_model_io.F ini_model_io.F; fi if [ ! -L ini_nh_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_fields.F ini_nh_fields.F; fi if [ ! -L ini_nh_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_vars.F ini_nh_vars.F; fi if [ ! -L ini_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nlfs_vars.F ini_nlfs_vars.F; fi if [ ! -L ini_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_parms.F ini_parms.F; fi if [ ! -L ini_p_ground.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_p_ground.F ini_p_ground.F; fi if [ ! -L ini_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_pressure.F ini_pressure.F; fi if [ ! -L ini_psurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_psurf.F ini_psurf.F; fi if [ ! -L ini_salt.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_salt.F ini_salt.F; fi if [ ! -L ini_sigma_hfac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_sigma_hfac.F ini_sigma_hfac.F; fi if [ ! -L ini_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_spherical_polar_grid.F ini_spherical_polar_grid.F; fi if [ ! -L ini_theta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_theta.F ini_theta.F; fi if [ ! -L initialise_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_fixed.F initialise_fixed.F; fi if [ ! -L initialise_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_varia.F initialise_varia.F; fi if [ ! -L ini_vel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vel.F ini_vel.F; fi if [ ! -L ini_vertical_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vertical_grid.F ini_vertical_grid.F; fi if [ ! -L integrate_for_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integrate_for_w.F integrate_for_w.F; fi if [ ! -L integr_continuity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integr_continuity.F integr_continuity.F; fi if [ ! -L load_fields_driver.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_fields_driver.F load_fields_driver.F; fi if [ ! -L load_grid_spacing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_grid_spacing.F load_grid_spacing.F; fi if [ ! -L load_ref_files.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_ref_files.F load_ref_files.F; fi if [ ! -L main_do_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/main_do_loop.F main_do_loop.F; fi if [ ! -L momentum_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/momentum_correction_step.F momentum_correction_step.F; fi if [ ! -L packages_boot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_boot.F packages_boot.F; fi if [ ! -L packages_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_check.F packages_check.F; fi if [ ! -L packages_error_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_error_msg.F packages_error_msg.F; fi if [ ! -L packages_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_fixed.F packages_init_fixed.F; fi if [ ! -L packages_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_variables.F packages_init_variables.F; fi if [ ! -L packages_print_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_print_msg.F packages_print_msg.F; fi if [ ! -L packages_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_readparms.F packages_readparms.F; fi if [ ! -L packages_unused_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_unused_msg.F packages_unused_msg.F; fi if [ ! -L packages_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_write_pickup.F packages_write_pickup.F; fi if [ ! -L plot_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/plot_field.F plot_field.F; fi if [ ! -L port_rand.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/port_rand.F port_rand.F; fi if [ ! -L post_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/post_cg3d.F post_cg3d.F; fi if [ ! -L pre_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pre_cg3d.F pre_cg3d.F; fi if [ ! -L pressure_for_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pressure_for_eos.F pressure_for_eos.F; fi if [ ! -L read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/read_pickup.F read_pickup.F; fi if [ ! -L remove_mean.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/remove_mean.F remove_mean.F; fi if [ ! -L reset_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/reset_nlfs_vars.F reset_nlfs_vars.F; fi if [ ! -L rotate_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_spherical_polar_grid.F rotate_spherical_polar_grid.F; fi if [ ! -L rotate_uv2en.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_uv2en.F rotate_uv2en.F; fi if [ ! -L salt_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/salt_integrate.F salt_integrate.F; fi if [ ! -L seawater.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/seawater.F seawater.F; fi if [ ! -L set_defaults.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_defaults.F set_defaults.F; fi if [ ! -L set_grid_factors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_grid_factors.F set_grid_factors.F; fi if [ ! -L set_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_parms.F set_parms.F; fi if [ ! -L set_ref_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_ref_state.F set_ref_state.F; fi if [ ! -L solve_for_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_for_pressure.F solve_for_pressure.F; fi if [ ! -L solve_pentadiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_pentadiagonal.F solve_pentadiagonal.F; fi if [ ! -L solve_tridiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_tridiagonal.F solve_tridiagonal.F; fi if [ ! -L solve_uv_tridiago.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_uv_tridiago.F solve_uv_tridiago.F; fi if [ ! -L state_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/state_summary.F state_summary.F; fi if [ ! -L swfrac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/swfrac.F swfrac.F; fi if [ ! -L taueddy_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_init_varia.F taueddy_init_varia.F; fi if [ ! -L taueddy_tendency_apply.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_tendency_apply.F taueddy_tendency_apply.F; fi if [ ! -L temp_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/temp_integrate.F temp_integrate.F; fi if [ ! -L the_main_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_main_loop.F the_main_loop.F; fi if [ ! -L the_model_main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_model_main.F the_model_main.F; fi if [ ! -L thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/thermodynamics.F thermodynamics.F; fi if [ ! -L timestep.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep.F timestep.F; fi if [ ! -L timestep_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_tracer.F timestep_tracer.F; fi if [ ! -L timestep_wvel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_wvel.F timestep_wvel.F; fi if [ ! -L tracers_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_correction_step.F tracers_correction_step.F; fi if [ ! -L tracers_iigw_correction.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_iigw_correction.F tracers_iigw_correction.F; fi if [ ! -L turnoff_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/turnoff_model_io.F turnoff_model_io.F; fi if [ ! -L update_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_cg2d.F update_cg2d.F; fi if [ ! -L update_etah.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etah.F update_etah.F; fi if [ ! -L update_etaws.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etaws.F update_etaws.F; fi if [ ! -L update_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_masks_etc.F update_masks_etc.F; fi if [ ! -L update_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_r_star.F update_r_star.F; fi if [ ! -L update_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_sigma.F update_sigma.F; fi if [ ! -L update_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_surf_dr.F update_surf_dr.F; fi if [ ! -L write_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_grid.F write_grid.F; fi if [ ! -L write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_pickup.F write_pickup.F; fi if [ ! -L write_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_state.F write_state.F; fi if [ ! -L gsl_ieee_env.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsl_ieee_env.c gsl_ieee_env.c; fi if [ ! -L ptwrapper.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ptwrapper.c ptwrapper.c; fi if [ ! -L setdir.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setdir.c setdir.c; fi if [ ! -L setrlstk.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setrlstk.c setrlstk.c; fi if [ ! -L sigreg.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/sigreg.c sigreg.c; fi if [ ! -L tim.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/tim.c tim.c; fi if [ ! -L timer_stats.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timer_stats.c timer_stats.c; fi if [ ! -L CPP_EEOPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h CPP_EEOPTIONS.h; fi if [ ! -L SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/SIZE.h SIZE.h; fi if [ ! -L DEBUG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/DEBUG_OPTIONS.h DEBUG_OPTIONS.h; fi if [ ! -L DIAGNOSTICS_CALC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_CALC.h DIAGNOSTICS_CALC.h; fi if [ ! -L DIAGNOSTICS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS.h DIAGNOSTICS.h; fi if [ ! -L DIAGNOSTICS_SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_SIZE.h DIAGNOSTICS_SIZE.h; fi if [ ! -L DIAG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAG_OPTIONS.h DIAG_OPTIONS.h; fi if [ ! -L DIAGSTATS_REGIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGSTATS_REGIONS.h DIAGSTATS_REGIONS.h; fi if [ ! -L gad_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev1_dir.h gad_ad_check_lev1_dir.h; fi if [ ! -L gad_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev2_dir.h gad_ad_check_lev2_dir.h; fi if [ ! -L gad_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev3_dir.h gad_ad_check_lev3_dir.h; fi if [ ! -L gad_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev4_dir.h gad_ad_check_lev4_dir.h; fi if [ ! -L GAD_FLUX_LIMITER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_FLUX_LIMITER.h GAD_FLUX_LIMITER.h; fi if [ ! -L GAD.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD.h GAD.h; fi if [ ! -L GAD_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_OPTIONS.h GAD_OPTIONS.h; fi if [ ! -L GAD_SOM_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_SOM_VARS.h GAD_SOM_VARS.h; fi if [ ! -L MDSIO_BUFF_3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_3D.h MDSIO_BUFF_3D.h; fi if [ ! -L MDSIO_BUFF_WH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_WH.h MDSIO_BUFF_WH.h; fi if [ ! -L MDSIO_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_OPTIONS.h MDSIO_OPTIONS.h; fi if [ ! -L MOM_COMMON_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_COMMON_OPTIONS.h MOM_COMMON_OPTIONS.h; fi if [ ! -L MOM_VISC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_VISC.h MOM_VISC.h; fi if [ ! -L MOM_FLUXFORM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM.h MOM_FLUXFORM.h; fi if [ ! -L MOM_FLUXFORM_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MOM_FLUXFORM_OPTIONS.h; fi if [ ! -L MOM_VECINV_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MOM_VECINV_OPTIONS.h; fi if [ ! -L MONITOR.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR.h MONITOR.h; fi if [ ! -L MONITOR_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR_OPTIONS.h MONITOR_OPTIONS.h; fi if [ ! -L obcs_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev1_dir.h obcs_ad_check_lev1_dir.h; fi if [ ! -L obcs_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev2_dir.h obcs_ad_check_lev2_dir.h; fi if [ ! -L obcs_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev3_dir.h obcs_ad_check_lev3_dir.h; fi if [ ! -L obcs_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev4_dir.h obcs_ad_check_lev4_dir.h; fi if [ ! -L OBCS_FIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_FIELDS.h OBCS_FIELDS.h; fi if [ ! -L OBCS_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_GRID.h OBCS_GRID.h; fi if [ ! -L OBCS_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_OPTIONS.h OBCS_OPTIONS.h; fi if [ ! -L OBCS_PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PARAMS.h OBCS_PARAMS.h; fi if [ ! -L OBCS_PTRACERS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PTRACERS.h OBCS_PTRACERS.h; fi if [ ! -L OBCS_SEAICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_SEAICE.h OBCS_SEAICE.h; fi if [ ! -L ORLANSKI.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/ORLANSKI.h ORLANSKI.h; fi if [ ! -L RW_MFLDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_MFLDS.h RW_MFLDS.h; fi if [ ! -L RW_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_OPTIONS.h RW_OPTIONS.h; fi if [ ! -L shelfice_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev1_dir.h shelfice_ad_check_lev1_dir.h; fi if [ ! -L shelfice_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev2_dir.h shelfice_ad_check_lev2_dir.h; fi if [ ! -L shelfice_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev3_dir.h shelfice_ad_check_lev3_dir.h; fi if [ ! -L shelfice_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev4_dir.h shelfice_ad_check_lev4_dir.h; fi if [ ! -L SHELFICE_COST.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_COST.h SHELFICE_COST.h; fi if [ ! -L SHELFICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE.h SHELFICE.h; fi if [ ! -L SHELFICE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_OPTIONS.h SHELFICE_OPTIONS.h; fi if [ ! -L SHELFICE_TAVE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_TAVE.h SHELFICE_TAVE.h; fi if [ ! -L TIMEAVE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_OPTIONS.h TIMEAVE_OPTIONS.h; fi if [ ! -L TIMEAVE_STATV.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_STATV.h TIMEAVE_STATV.h; fi if [ ! -L cmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_c.h cmumps_c.h; fi if [ ! -L cmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_root.h cmumps_root.h; fi if [ ! -L cmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_struc.h cmumps_struc.h; fi if [ ! -L dmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_c.h dmumps_c.h; fi if [ ! -L dmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_root.h dmumps_root.h; fi if [ ! -L dmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_struc.h dmumps_struc.h; fi if [ ! -L gklib_defs.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_defs.h gklib_defs.h; fi if [ ! -L gklib_rename.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_rename.h gklib_rename.h; fi if [ ! -L gklib_tls.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_tls.h gklib_tls.h; fi if [ ! -L metis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/metis.h metis.h; fi if [ ! -L mpicxx.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpicxx.h mpicxx.h; fi if [ ! -L mpif.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpif.h mpif.h; fi if [ ! -L mpi.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi.h mpi.h; fi if [ ! -L mpiof.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpiof.h mpiof.h; fi if [ ! -L mpio.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpio.h mpio.h; fi if [ ! -L mpi_proto.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi_proto.h mpi_proto.h; fi if [ ! -L mumps_compat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_compat.h mumps_compat.h; fi if [ ! -L mumps_c_types.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_c_types.h mumps_c_types.h; fi if [ ! -L mumps_int_def.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_int_def.h mumps_int_def.h; fi if [ ! -L parmetis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/parmetis.h parmetis.h; fi if [ ! -L petscao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscao.h petscao.h; fi if [ ! -L petscbag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbag.h petscbag.h; fi if [ ! -L petscblaslapack.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack.h petscblaslapack.h; fi if [ ! -L petscblaslapack_mangle.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack_mangle.h petscblaslapack_mangle.h; fi if [ ! -L petscbt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbt.h petscbt.h; fi if [ ! -L petsccharacteristic.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccharacteristic.h petsccharacteristic.h; fi if [ ! -L petscconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf.h petscconf.h; fi if [ ! -L petscconfiginfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconfiginfo.h petscconfiginfo.h; fi if [ ! -L petscconf_poison.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf_poison.h petscconf_poison.h; fi if [ ! -L petscconvest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconvest.h petscconvest.h; fi if [ ! -L petscctable.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscctable.h petscctable.h; fi if [ ! -L petsccxxcomplexfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccxxcomplexfix.h petsccxxcomplexfix.h; fi if [ ! -L petscdevice_cuda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cuda.h petscdevice_cuda.h; fi if [ ! -L petscdevice_cupm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cupm.h petscdevice_cupm.h; fi if [ ! -L petscdevice.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice.h petscdevice.h; fi if [ ! -L petscdevice_hip.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_hip.h petscdevice_hip.h; fi if [ ! -L petscdevicetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevicetypes.h petscdevicetypes.h; fi if [ ! -L petscdmadaptor.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptor.h petscdmadaptor.h; fi if [ ! -L petscdmceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmceed.h petscdmceed.h; fi if [ ! -L petscdmcomposite.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmcomposite.h petscdmcomposite.h; fi if [ ! -L petscdmda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmda.h petscdmda.h; fi if [ ! -L petscdmdatypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmdatypes.h petscdmdatypes.h; fi if [ ! -L petscdmfield.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmfield.h petscdmfield.h; fi if [ ! -L petscdmforest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmforest.h petscdmforest.h; fi if [ ! -L petscdm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdm.h petscdm.h; fi if [ ! -L petscdmlabelephemeral.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabelephemeral.h petscdmlabelephemeral.h; fi if [ ! -L petscdmlabel.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabel.h petscdmlabel.h; fi if [ ! -L petscdmmoab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmmoab.h petscdmmoab.h; fi if [ ! -L petscdmnetwork.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmnetwork.h petscdmnetwork.h; fi if [ ! -L petscdmpatch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmpatch.h petscdmpatch.h; fi if [ ! -L petscdmplexceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexceed.h petscdmplexceed.h; fi if [ ! -L petscdmplex.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplex.h petscdmplex.h; fi if [ ! -L petscdmplextransform.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransform.h petscdmplextransform.h; fi if [ ! -L petscdmplextransformtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransformtypes.h petscdmplextransformtypes.h; fi if [ ! -L petscdmplextypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextypes.h petscdmplextypes.h; fi if [ ! -L petscdmproduct.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmproduct.h petscdmproduct.h; fi if [ ! -L petscdmredundant.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmredundant.h petscdmredundant.h; fi if [ ! -L petscdmshell.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmshell.h petscdmshell.h; fi if [ ! -L petscdmsliced.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmsliced.h petscdmsliced.h; fi if [ ! -L petscdmstag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmstag.h petscdmstag.h; fi if [ ! -L petscdmswarm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmswarm.h petscdmswarm.h; fi if [ ! -L petscdmtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmtypes.h petscdmtypes.h; fi if [ ! -L petscdraw.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdraw.h petscdraw.h; fi if [ ! -L petscdrawtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdrawtypes.h petscdrawtypes.h; fi if [ ! -L petscds.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscds.h petscds.h; fi if [ ! -L petscdstypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdstypes.h petscdstypes.h; fi if [ ! -L petscdt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdt.h petscdt.h; fi if [ ! -L petscdualspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdualspace.h petscdualspace.h; fi if [ ! -L petscerror.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscerror.h petscerror.h; fi if [ ! -L petscfeceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfeceed.h petscfeceed.h; fi if [ ! -L petscfe.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfe.h petscfe.h; fi if [ ! -L petscfetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfetypes.h petscfetypes.h; fi if [ ! -L petscfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfix.h petscfix.h; fi if [ ! -L petscfvceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvceed.h petscfvceed.h; fi if [ ! -L petscfv.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfv.h petscfv.h; fi if [ ! -L petscfvtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvtypes.h petscfvtypes.h; fi if [ ! -L petsc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsc.h petsc.h; fi if [ ! -L petscis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscis.h petscis.h; fi if [ ! -L petscistypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscistypes.h petscistypes.h; fi if [ ! -L petscksp.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscksp.h petscksp.h; fi if [ ! -L petsclandau.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclandau.h petsclandau.h; fi if [ ! -L petsclayouthdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclayouthdf5.h petsclayouthdf5.h; fi if [ ! -L petsclogdeprecated.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogdeprecated.h petsclogdeprecated.h; fi if [ ! -L petsclog.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclog.h petsclog.h; fi if [ ! -L petsclogtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogtypes.h petsclogtypes.h; fi if [ ! -L petscmachineinfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmachineinfo.h petscmachineinfo.h; fi if [ ! -L petscmacros.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmacros.h petscmacros.h; fi if [ ! -L petscmatcoarsen.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatcoarsen.h petscmatcoarsen.h; fi if [ ! -L petscmatelemental.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatelemental.h petscmatelemental.h; fi if [ ! -L petscmat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmat.h petscmat.h; fi if [ ! -L petscmath.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmath.h petscmath.h; fi if [ ! -L petscmathtool.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathtool.h petscmathtool.h; fi if [ ! -L petscmathypre.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathypre.h petscmathypre.h; fi if [ ! -L petscmatlab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatlab.h petscmatlab.h; fi if [ ! -L petscoptions.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscoptions.h petscoptions.h; fi if [ ! -L petscpartitioner.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpartitioner.h petscpartitioner.h; fi if [ ! -L petscpc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpc.h petscpc.h; fi if [ ! -L petscpctypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpctypes.h petscpctypes.h; fi if [ ! -L petscpf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpf.h petscpf.h; fi if [ ! -L petscpkg_version.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpkg_version.h petscpkg_version.h; fi if [ ! -L petscsection.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsection.h petscsection.h; fi if [ ! -L petscsectiontypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsectiontypes.h petscsectiontypes.h; fi if [ ! -L petscsf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsf.h petscsf.h; fi if [ ! -L petscsftypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsftypes.h petscsftypes.h; fi if [ ! -L petscsnes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnes.h petscsnes.h; fi if [ ! -L petscspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscspace.h petscspace.h; fi if [ ! -L petscstring.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscstring.h petscstring.h; fi if [ ! -L petscsys.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsys.h petscsys.h; fi if [ ! -L petscsystypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsystypes.h petscsystypes.h; fi if [ ! -L petsctao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao.h petsctao.h; fi if [ ! -L petsctaolinesearch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctaolinesearch.h petsctaolinesearch.h; fi if [ ! -L petsctime.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctime.h petsctime.h; fi if [ ! -L petscts.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscts.h petscts.h; fi if [ ! -L petscvec.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscvec.h petscvec.h; fi if [ ! -L petscversion.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscversion.h petscversion.h; fi if [ ! -L petscviennacl.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviennacl.h petscviennacl.h; fi if [ ! -L petscviewerexodusii.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerexodusii.h petscviewerexodusii.h; fi if [ ! -L petscviewer.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewer.h petscviewer.h; fi if [ ! -L petscviewerhdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerhdf5.h petscviewerhdf5.h; fi if [ ! -L petscviewersaws.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewersaws.h petscviewersaws.h; fi if [ ! -L petscviewertypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewertypes.h petscviewertypes.h; fi if [ ! -L petscwebclient.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscwebclient.h petscwebclient.h; fi if [ ! -L smumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_c.h smumps_c.h; fi if [ ! -L smumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_root.h smumps_root.h; fi if [ ! -L smumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_struc.h smumps_struc.h; fi if [ ! -L zconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zconf.h zconf.h; fi if [ ! -L zlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zlib.h zlib.h; fi if [ ! -L zmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_c.h zmumps_c.h; fi if [ ! -L zmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_root.h zmumps_root.h; fi if [ ! -L zmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_struc.h zmumps_struc.h; fi if [ ! -L BAR2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BAR2.h BAR2.h; fi if [ ! -L BARRIER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BARRIER.h BARRIER.h; fi if [ ! -L CPP_EEMACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CPP_EEMACROS.h CPP_EEMACROS.h; fi if [ ! -L CUMULSUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CUMULSUM.h CUMULSUM.h; fi if [ ! -L DEF_IN_MAKEFILE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/DEF_IN_MAKEFILE.h DEF_IN_MAKEFILE.h; fi if [ ! -L EEBUFF_SCPU.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEBUFF_SCPU.h EEBUFF_SCPU.h; fi if [ ! -L EEPARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEPARAMS.h EEPARAMS.h; fi if [ ! -L EESUPPORT.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EESUPPORT.h EESUPPORT.h; fi if [ ! -L EXCH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EXCH.h EXCH.h; fi if [ ! -L GLOBAL_MAX.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_MAX.h GLOBAL_MAX.h; fi if [ ! -L GLOBAL_SUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_SUM.h GLOBAL_SUM.h; fi if [ ! -L MAIN_PDIRECTIVES1.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES1.h MAIN_PDIRECTIVES1.h; fi if [ ! -L MAIN_PDIRECTIVES2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES2.h MAIN_PDIRECTIVES2.h; fi if [ ! -L MPI_INFO.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MPI_INFO.h MPI_INFO.h; fi if [ ! -L SIGREG.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/SIGREG.h SIGREG.h; fi if [ ! -L CG2D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG2D.h CG2D.h; fi if [ ! -L CG3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG3D.h CG3D.h; fi if [ ! -L CPP_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h CPP_OPTIONS.h; fi if [ ! -L DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXC_MACROS.h DXC_MACROS.h; fi if [ ! -L DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXF_MACROS.h DXF_MACROS.h; fi if [ ! -L DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXG_MACROS.h DXG_MACROS.h; fi if [ ! -L DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXV_MACROS.h DXV_MACROS.h; fi if [ ! -L DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYC_MACROS.h DYC_MACROS.h; fi if [ ! -L DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYF_MACROS.h DYF_MACROS.h; fi if [ ! -L DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYG_MACROS.h DYG_MACROS.h; fi if [ ! -L DYNVARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYNVARS.h DYNVARS.h; fi if [ ! -L DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYU_MACROS.h DYU_MACROS.h; fi if [ ! -L EOS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/EOS.h EOS.h; fi if [ ! -L FCORI_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FCORI_MACROS.h FCORI_MACROS.h; fi if [ ! -L FFIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FFIELDS.h FFIELDS.h; fi if [ ! -L GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID.h GRID.h; fi if [ ! -L GRID_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID_MACROS.h GRID_MACROS.h; fi if [ ! -L HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACC_MACROS.h HFACC_MACROS.h; fi if [ ! -L HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACS_MACROS.h HFACS_MACROS.h; fi if [ ! -L HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACW_MACROS.h HFACW_MACROS.h; fi if [ ! -L MASKS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKS_MACROS.h MASKS_MACROS.h; fi if [ ! -L MASKW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKW_MACROS.h MASKW_MACROS.h; fi if [ ! -L NH_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/NH_VARS.h NH_VARS.h; fi if [ ! -L PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/PARAMS.h PARAMS.h; fi if [ ! -L RA_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RA_MACROS.h RA_MACROS.h; fi if [ ! -L RAS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAS_MACROS.h RAS_MACROS.h; fi if [ ! -L RAW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAW_MACROS.h RAW_MACROS.h; fi if [ ! -L RECIP_DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXC_MACROS.h RECIP_DXC_MACROS.h; fi if [ ! -L RECIP_DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXF_MACROS.h RECIP_DXF_MACROS.h; fi if [ ! -L RECIP_DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXG_MACROS.h RECIP_DXG_MACROS.h; fi if [ ! -L RECIP_DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXV_MACROS.h RECIP_DXV_MACROS.h; fi if [ ! -L RECIP_DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYC_MACROS.h RECIP_DYC_MACROS.h; fi if [ ! -L RECIP_DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYF_MACROS.h RECIP_DYF_MACROS.h; fi if [ ! -L RECIP_DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYG_MACROS.h RECIP_DYG_MACROS.h; fi if [ ! -L RECIP_DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYU_MACROS.h RECIP_DYU_MACROS.h; fi if [ ! -L RECIP_HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACC_MACROS.h RECIP_HFACC_MACROS.h; fi if [ ! -L RECIP_HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACS_MACROS.h RECIP_HFACS_MACROS.h; fi if [ ! -L RECIP_HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACW_MACROS.h RECIP_HFACW_MACROS.h; fi if [ ! -L RESTART.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RESTART.h RESTART.h; fi if [ ! -L SET_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SET_GRID.h SET_GRID.h; fi if [ ! -L SOLVE_FOR_PRESSURE3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE3D.h SOLVE_FOR_PRESSURE3D.h; fi if [ ! -L SOLVE_FOR_PRESSURE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE.h SOLVE_FOR_PRESSURE.h; fi if [ ! -L SURFACE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SURFACE.h SURFACE.h; fi if [ ! -L TANPHIATU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATU_MACROS.h TANPHIATU_MACROS.h; fi if [ ! -L TANPHIATV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATV_MACROS.h TANPHIATV_MACROS.h; fi if [ ! -L THE_MODEL_COMMON_BLOCKS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/THE_MODEL_COMMON_BLOCKS.h THE_MODEL_COMMON_BLOCKS.h; fi if [ ! -L XC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/XC_MACROS.h XC_MACROS.h; fi if [ ! -L YC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/YC_MACROS.h YC_MACROS.h; fi Creating FC_NAMEMANGLE.h ... echo "#define FC_NAMEMANGLE(X) X ## _" > FC_NAMEMANGLE.h Creating BUILD_INFO.h ... echo "#define THISVER 'checkpoint68i'" > BUILD_INFO.h echo "#define THISUSER 'jenkins'" >> BUILD_INFO.h echo "#define THISDATE 'Thu Sep 12 12:50:46 PM PDT 2024'" >> BUILD_INFO.h echo "#define THISHOST 'Debian-12-VM'" >> BUILD_INFO.h make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build' /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/xmakedepend -f Makefile -o .f -DWORDLENGTH=4 -DNML_TERMINATOR -DALLOW_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_ETIME_SBR -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -DHAVE_FLUSH -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu -I/usr/include cpl_issm.F do_oceanic_phys.F eeboot_minimal.F eedie.F chksum_tiled.F debug_call.F debug_cs_corner_uv.F debug_enter.F debug_fld_stats_rl.F debug_fld_stats_rs.F debug_leave.F debug_msg.F debug_stats_rl.F debug_stats_rs.F fill_in_corners_rl.F write_fullarray_rl.F write_fullarray_rs.F diag_calc_psivel.F diag_cg2d.F diagnostics_addtolist.F diagnostics_calc_phivel.F diagnostics_check.F diagnostics_clear.F diagnostics_fill.F diagnostics_fill_field.F diagnostics_fill_rs.F diagnostics_fill_state.F diagnostics_fract_fill.F diagnostics_ini_io.F diagnostics_init_early.F diagnostics_init_fixed.F diagnostics_init_varia.F diagnostics_interp_p2p.F diagnostics_interp_vert.F diagnostics_is_on.F diagnostics_list_check.F diagnostics_main_init.F diagnostics_mnc_out.F diagnostics_out.F diagnostics_readparms.F diagnostics_read_pickup.F diagnostics_scale_fill.F diagnostics_scale_fill_rs.F diagnostics_set_calc.F diagnostics_setdiag.F diagnostics_set_levels.F diagnostics_set_pointers.F diagnostics_status_error.F diagnostics_sum_levels.F diagnostics_summary.F diagnostics_switch_onoff.F diagnostics_utils.F diagnostics_write_adj.F diagnostics_write.F diagnostics_write_pickup.F diagstats_ascii_out.F diagstats_calc.F diagstats_clear.F diagstats_close_io.F diagstats_fill.F diagstats_global.F diagstats_ini_io.F diagstats_local.F diagstats_mnc_out.F diagstats_others_calc.F diagstats_output.F diagstats_setdiag.F diagstats_set_pointers.F diagstats_set_regions.F diag_vegtile_fill.F gad_advection.F gad_advscheme.F gad_biharm_r.F gad_biharm_x.F gad_biharm_y.F gad_c2_adv_r.F gad_c2_adv_x.F gad_c2_adv_y.F gad_c2_impl_r.F gad_c4_adv_r.F gad_c4_adv_x.F gad_c4_adv_y.F gad_calc_rhs.F gad_check.F gad_del2.F gad_diagnostics_init.F gad_diagnostics_state.F gad_diff_r.F gad_diff_x.F gad_diff_y.F gad_dst2u1_adv_r.F gad_dst2u1_adv_x.F gad_dst2u1_adv_y.F gad_dst2u1_impl_r.F gad_dst3_adv_r.F gad_dst3_adv_x.F gad_dst3_adv_y.F gad_dst3fl_adv_r.F gad_dst3fl_adv_x.F gad_dst3fl_adv_y.F gad_dst3fl_impl_r.F gad_exch_som.F gad_fluxlimit_adv_r.F gad_fluxlimit_adv_x.F gad_fluxlimit_adv_y.F gad_fluxlimit_impl_r.F gad_grad_x.F gad_grad_y.F gad_implicit_r.F gad_init_fixed.F gad_init_varia.F gad_os7mp_adv_r.F gad_os7mp_adv_x.F gad_os7mp_adv_y.F gad_osc_hat_r.F gad_osc_hat_x.F gad_osc_hat_y.F gad_osc_mul_r.F gad_osc_mul_x.F gad_osc_mul_y.F gad_plm_fun.F gad_ppm_adv_r.F gad_ppm_adv_x.F gad_ppm_adv_y.F gad_ppm_flx_r.F gad_ppm_flx_x.F gad_ppm_flx_y.F gad_ppm_fun.F gad_ppm_hat_r.F gad_ppm_hat_x.F gad_ppm_hat_y.F gad_ppm_p3e_r.F gad_ppm_p3e_x.F gad_ppm_p3e_y.F gad_pqm_adv_r.F gad_pqm_adv_x.F gad_pqm_adv_y.F gad_pqm_flx_r.F gad_pqm_flx_x.F gad_pqm_flx_y.F gad_pqm_fun.F gad_pqm_hat_r.F gad_pqm_hat_x.F gad_pqm_hat_y.F gad_pqm_p5e_r.F gad_pqm_p5e_x.F gad_pqm_p5e_y.F gad_read_pickup.F gad_som_advect.F gad_som_adv_r.F gad_som_adv_x.F gad_som_adv_y.F gad_som_exchanges.F gad_som_fill_cs_corner.F gad_som_lim_r.F gad_som_prep_cs_corner.F gad_u3_adv_r.F gad_u3_adv_x.F gad_u3_adv_y.F gad_u3c4_impl_r.F gad_write_pickup.F salt_fill.F mdsio_buffertorl.F mdsio_buffertors.F mdsio_check4file.F mdsio_facef_read.F mdsio_gl.F mdsio_gl_slice.F mdsio_pass_r4torl.F mdsio_pass_r4tors.F mdsio_pass_r8torl.F mdsio_pass_r8tors.F mdsio_rd_rec_rl.F mdsio_rd_rec_rs.F mdsio_read_field.F mdsio_read_meta.F mdsio_read_section.F mdsio_read_tape.F mdsio_readvec_loc.F mdsio_read_whalos.F mdsio_rw_field.F mdsio_rw_slice.F mdsio_seg4torl.F mdsio_seg4tors.F mdsio_seg8torl.F mdsio_seg8tors.F mdsio_segxtorx_2d.F mdsio_write_field.F mdsio_writelocal.F mdsio_write_meta.F mdsio_write_section.F mdsio_write_tape.F mdsio_writevec_loc.F mdsio_write_whalos.F mdsio_wr_metafiles.F mdsio_wr_rec_rl.F mdsio_wr_rec_rs.F mom_calc_3d_strain.F mom_calc_absvort3.F mom_calc_hdiv.F mom_calc_hfacz.F mom_calc_ke.F mom_calc_relvort3.F mom_calc_smag_3d.F mom_calc_strain.F mom_calc_tension.F mom_calc_visc.F mom_diagnostics_init.F mom_hdissip.F mom_init_fixed.F mom_quasihydrostatic.F mom_u_botdrag_coeff.F mom_u_coriolis_nh.F mom_u_implicit_r.F mom_u_metric_nh.F mom_u_rviscflux.F mom_u_sidedrag.F mom_uv_smag_3d.F mom_v_botdrag_coeff.F mom_v_coriolis_nh.F mom_v_implicit_r.F mom_visc_qgl_limit.F mom_visc_qgl_stretch.F mom_v_metric_nh.F mom_v_rviscflux.F mom_v_sidedrag.F mom_w_coriolis_nh.F mom_w_metric_nh.F mom_w_sidedrag.F mom_w_smag_3d.F mom_calc_rtrans.F mom_fluxform.F mom_u_adv_uu.F mom_u_adv_vu.F mom_u_adv_wu.F mom_u_coriolis.F mom_u_del2u.F mom_u_metric_cylinder.F mom_u_metric_sphere.F mom_uv_boundary.F mom_u_xviscflux.F mom_u_yviscflux.F mom_v_adv_uv.F mom_v_adv_vv.F mom_v_adv_wv.F mom_v_coriolis.F mom_v_del2v.F mom_v_metric_cylinder.F mom_v_metric_sphere.F mom_v_xviscflux.F mom_v_yviscflux.F mom_vecinv.F mom_vi_coriolis.F mom_vi_del2uv.F mom_vi_hdissip.F mom_vi_u_coriolis_c4.F mom_vi_u_coriolis.F mom_vi_u_grad_ke.F mom_vi_u_vertshear.F mom_vi_v_coriolis_c4.F mom_vi_v_coriolis.F mom_vi_v_grad_ke.F mom_vi_v_vertshear.F mon_advcfl.F mon_advcflw2.F mon_advcflw.F mon_calc_advcfl.F mon_calc_stats_rl.F mon_calc_stats_rs.F mon_init.F monitor_ad.F monitor.F monitor_g.F mon_ke.F mon_out.F mon_printstats_rl.F mon_printstats_rs.F mon_set_iounit.F mon_set_pref.F mon_solution.F mon_stats_latbnd_rl.F mon_stats_rl.F mon_stats_rs.F mon_surfcor.F mon_vort3.F mon_writestats_rl.F mon_writestats_rs.F obcs_add_tides.F obcs_adjust.F obcs_adjust_uvice.F obcs_apply_eta.F obcs_apply_ptracer.F obcs_apply_r_star.F obcs_apply_seaice.F obcs_apply_surf_dr.F obcs_apply_ts.F obcs_apply_uv.F obcs_apply_uvice.F obcs_apply_w.F obcs_balance_flow.F obcs_calc.F obcs_calc_stevens.F obcs_check_depths.F obcs_check.F obcs_copy_tracer.F obcs_copy_uv_n.F obcs_diag_balance.F obcs_exchanges.F obcs_exf_load.F obcs_fields_load.F obcs_init_fixed.F obcs_init_variables.F obcs_monitor.F obcs_mon_stats.F obcs_output.F obcs_prescribe_read.F obcs_readparms.F obcs_read_pickup.F obcs_save_uv_n.F obcs_seaice_sponge.F obcs_set_connect.F obcs_sponge.F obcs_u1_adv_tracer.F obcs_write_pickup.F orlanski_east.F orlanski_init.F orlanski_north.F orlanski_south.F orlanski_west.F get_write_global_fld.F read_fld_xy_rl.F read_fld_xy_rs.F read_fld_xyz_rl.F read_fld_xyz_rs.F read_glvec_rl.F read_glvec_rs.F read_mflds.F read_rec.F rw_get_suffix.F set_write_global_fld.F write_fld_3d_rl.F write_fld_3d_rs.F write_fld_s3d_rl.F write_fld_s3d_rs.F write_fld_xy_rl.F write_fld_xy_rs.F write_fld_xyz_rl.F write_fld_xyz_rs.F write_glvec_rl.F write_glvec_rs.F write_local_rl.F write_local_rs.F write_rec.F shelfice_check.F shelfice_cost_accumulate.F shelfice_cost_final.F shelfice_cost_shifwflx.F shelfice_diagnostics_drag.F shelfice_forcing.F shelfice_forcing_surf.F shelfice_init_depths.F shelfice_init_fixed.F shelfice_init_varia.F shelfice_mask_seaice.F shelfice_mnc_init.F shelfice_output.F shelfice_readparms.F shelfice_read_pickup.F shelfice_remesh_calc_w.F shelfice_remesh_c_mask.F shelfice_remeshing.F shelfice_remesh_state.F shelfice_remesh_uv_mask.F shelfice_step_icemass.F shelfice_thermodynamics.F shelfice_u_drag_coeff.F shelfice_v_drag_coeff.F shelfice_write_pickup.F timeave_cumul_1k1t.F timeave_cumul_1t.F timeave_cumul_1vfc.F timeave_cumul_2v.F timeave_cumul_2vfc.F timeave_cumulate.F timeave_cumul_dif_1t.F timeave_init_fixed.F timeave_norma_2v.F timeave_normalize.F timeave_reset.F timeave_statvars.F timeave_statv_write.F timeave_surf_flux.F all_proc_die.F bar2.F bar_check.F barrier.F check_threads.F comm_stats.F cumulsum_z_tile.F different_multiple.F diff_phase_multiple.F eeboot.F eedata_example.F eeintro_msg.F eeset_parms.F eewrite_eeenv.F exch0_r4.F exch0_r8.F exch0_rl.F exch0_rs.F exch1_bg_r4_cube.F exch1_bg_r8_cube.F exch1_bg_rl_cube.F exch1_bg_rs_cube.F exch1_r4_cube.F exch1_r4.F exch1_r8_cube.F exch1_r8.F exch1_rl_ad.F exch1_rl_cube_ad.F exch1_rl_cube.F exch1_rl.F exch1_rs_ad.F exch1_rs_cube_ad.F exch1_rs_cube.F exch1_rs.F exch1_uv_r4_cube.F exch1_uv_r8_cube.F exch1_uv_rl_cube.F exch1_uv_rs_cube.F exch1_z_r4_cube.F exch1_z_r8_cube.F exch1_z_rl_cube.F exch1_z_rs_cube.F exch_3d_r4.F exch_3d_r8.F exch_3d_rl.F exch_3d_rs.F exch_cycle_ebl.F exch_init.F exch_r4_recv_get_x.F exch_r4_recv_get_y.F exch_r4_send_put_x.F exch_r4_send_put_y.F exch_r8_recv_get_x.F exch_r8_recv_get_y.F exch_r8_send_put_x.F exch_r8_send_put_y.F exch_rl_recv_get_x.F exch_rl_recv_get_y.F exch_rl_send_put_x.F exch_rl_send_put_y.F exch_rs_recv_get_x.F exch_rs_recv_get_y.F exch_rs_send_put_x.F exch_rs_send_put_y.F exch_s3d_r4.F exch_s3d_r8.F exch_s3d_rl.F exch_s3d_rs.F exch_sm_3d_r4.F exch_sm_3d_r8.F exch_sm_3d_rl.F exch_sm_3d_rs.F exch_uv_3d_r4.F exch_uv_3d_r8.F exch_uv_3d_rl.F exch_uv_3d_rs.F exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rs.F exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rs.F exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rs.F exch_uv_xy_r4.F exch_uv_xy_r8.F exch_uv_xy_rl.F exch_uv_xy_rs.F exch_uv_xyz_r4.F exch_uv_xyz_r8.F exch_uv_xyz_rl.F exch_uv_xyz_rs.F exch_xy_r4.F exch_xy_r8.F exch_xy_rl.F exch_xy_rs.F exch_xyz_r4.F exch_xyz_r8.F exch_xyz_rl.F exch_xyz_rs.F exch_z_3d_r4.F exch_z_3d_r8.F exch_z_3d_rl.F exch_z_3d_rs.F fill_cs_corner_ag_rl.F fill_cs_corner_tr_rl.F fill_cs_corner_uv_rl.F fill_cs_corner_uv_rs.F fool_the_compiler.F gather_2d_r4.F gather_2d_r8.F gather_2d_wh_r4.F gather_2d_wh_r8.F gather_vec_r4.F gather_vec_r8.F gather_xz.F gather_yz.F get_periodic_interval.F global_max.F global_sum.F global_sum_singlecpu.F global_sum_tile.F global_vec_sum.F gsum.F ini_communication_patterns.F ini_procs.F ini_threading_environment.F lef_zero.F main.F master_cpu_io.F master_cpu_thread.F mds_byteswapi4.F mds_byteswapr4.F mds_byteswapr8.F mdsfindunit.F mds_flush.F mds_reclen.F memsync.F nml_change_syntax.F nml_set_terminator.F open_copy_data_file.F print.F reset_halo.F scatter_2d_r4.F scatter_2d_r8.F scatter_2d_wh_r4.F scatter_2d_wh_r8.F scatter_vec_r4.F scatter_vec_r8.F scatter_xz.F scatter_yz.F stop_if_error.F timers.F utils.F write_utils.F adams_bashforth2.F adams_bashforth3.F add_walls2masks.F apply_forcing.F calc_3d_diffusivity.F calc_adv_flow.F calc_div_ghat.F calc_eddy_stress.F calc_grad_phi_fv.F calc_grad_phi_hyd.F calc_grad_phi_surf.F calc_grid_angles.F calc_gw.F calc_ivdc.F calc_oce_mxlayer.F calc_phi_hyd.F calc_r_star.F calc_surf_dr.F calc_viscosity.F calc_wsurf_tr.F cg2d_ex0.F cg2d.F cg2d_nsa.F cg2d_sr.F cg3d_ex0.F cg3d.F check_pickup.F config_check.F config_summary.F convective_adjustment.F convective_adjustment_ini.F convectively_mixtracer.F convective_weights.F correction_step.F cycle_ab_tracer.F cycle_tracer.F diags_oceanic_surf_flux.F diags_phi_hyd.F diags_phi_rlow.F diags_rho.F diags_sound_speed.F do_atmospheric_phys.F do_fields_blocking_exchanges.F do_stagger_fields_exchanges.F do_statevars_diags.F do_statevars_tave.F do_the_model_io.F do_write_pickup.F dynamics.F external_fields_load.F external_forcing.F external_forcing_surf.F find_alpha.F find_hyd_press_1d.F find_rho.F forcing_surf_relax.F forward_step.F freesurf_rescale_g.F freeze_surface.F grad_sigma.F gsw_teos10.F impldiff.F ini_cartesian_grid.F ini_cg2d.F ini_cg3d.F ini_cori.F ini_curvilinear_grid.F ini_cylinder_grid.F ini_depths.F ini_dynvars.F ini_eos.F ini_ffields.F ini_fields.F ini_forcing.F ini_global_domain.F ini_grid.F ini_linear_phisurf.F ini_local_grid.F ini_masks_etc.F ini_mixing.F ini_mnc_vars.F ini_model_io.F ini_nh_fields.F ini_nh_vars.F ini_nlfs_vars.F ini_parms.F ini_p_ground.F ini_pressure.F ini_psurf.F ini_salt.F ini_sigma_hfac.F ini_spherical_polar_grid.F ini_theta.F initialise_fixed.F initialise_varia.F ini_vel.F ini_vertical_grid.F integrate_for_w.F integr_continuity.F load_fields_driver.F load_grid_spacing.F load_ref_files.F main_do_loop.F momentum_correction_step.F packages_boot.F packages_check.F packages_error_msg.F packages_init_fixed.F packages_init_variables.F packages_print_msg.F packages_readparms.F packages_unused_msg.F packages_write_pickup.F plot_field.F port_rand.F post_cg3d.F pre_cg3d.F pressure_for_eos.F read_pickup.F remove_mean.F reset_nlfs_vars.F rotate_spherical_polar_grid.F rotate_uv2en.F salt_integrate.F seawater.F set_defaults.F set_grid_factors.F set_parms.F set_ref_state.F solve_for_pressure.F solve_pentadiagonal.F solve_tridiagonal.F solve_uv_tridiago.F state_summary.F swfrac.F taueddy_init_varia.F taueddy_tendency_apply.F temp_integrate.F the_main_loop.F the_model_main.F thermodynamics.F timestep.F timestep_tracer.F timestep_wvel.F tracers_correction_step.F tracers_iigw_correction.F turnoff_model_io.F update_cg2d.F update_etah.F update_etaws.F update_masks_etc.F update_r_star.F update_sigma.F update_surf_dr.F write_grid.F write_pickup.F write_state.F Appending dependencies to Makefile /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/f90mkdepend >> Makefile WARNING: f90mkdepend: no source file found for module `petscdtbinomial()` WARNING: f90mkdepend: no source file found for module `seterra()` WARNING: f90mkdepend: no source file found for module `seterra()` WARNING: f90mkdepend: no source file found for module `petsccalla()`. WARNING: f90mkdepend: no source file found for module `chkmema` WARNING: f90mkdepend: no source file found for module `petscstackpushexternal()` WARNING: f90mkdepend: no source file found for module `petscfunctionbeginuser` WARNING: f90mkdepend: no source file found for module this WARNING: f90mkdepend: no source file found for module `petscobjectoptionsbegin()` WARNING: f90mkdepend: no source file found for module `petsc_null_integer` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscintmulterror()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module `petscint64mult()` WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()` WARNING: f90mkdepend: no source file found for module the WARNING: f90mkdepend: no source file found for module `petscclassidregister()` WARNING: f90mkdepend: no source file found for module `petsccount_fmt` WARNING: f90mkdepend: no source file found for module of WARNING: f90mkdepend: no source file found for module `petscviewerfilesetmode()` rm -f makedepend.out [41;37m step #6: RunUncoupledMITgcm [0m Year: 0 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.083333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.16667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.25 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.33333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.41667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.5 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.58333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.66667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.75 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.83333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 0.91667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END Year: 1 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END [41;37m step #7: CreateMesh [0m Info: creating coordinates in polar stereographic (Std Latitude: 71S Meridian: 0) saving model as: Models/IceOcean.CreateMesh [41;37m step #8: MeshGeometry [0m saving model as: Models/IceOcean.MeshGeometry [41;37m step #9: ParameterizeIce [0m saving model as: Models/IceOcean.ParameterizeIce [41;37m step #10: RunUncoupledISSM [0m checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/12 time [yr]: 0.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 2/12 time [yr]: 0.17 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 3/12 time [yr]: 0.25 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 4/12 time [yr]: 0.33 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 5/12 time [yr]: 0.42 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 6/12 time [yr]: 0.50 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 7/12 time [yr]: 0.58 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 8/12 time [yr]: 0.67 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 9/12 time [yr]: 0.75 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 10/12 time [yr]: 0.83 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 11/12 time [yr]: 0.92 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results iteration 12/12 time [yr]: 1.00 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0941359 Total Core solution elapsed time: 3.13947 Linear solver elapsed time: 1.98447 (63%) Total elapsed time: 0 hrs 0 min 3 sec loading results from cluster saving model as: Models/IceOcean.RunUncoupledISSM [41;37m step #11: RunCoupledMITgcmISSM [0m Year: 0 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0460529 Total Core solution elapsed time: 0.573313 Linear solver elapsed time: 0.390745 (68%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.083333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.17 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0691329 Total Core solution elapsed time: 0.38811 Linear solver elapsed time: 0.230474 (59%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.16667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.25 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0792389 Total Core solution elapsed time: 0.391897 Linear solver elapsed time: 0.240358 (61%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.25 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.33 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0431134 Total Core solution elapsed time: 0.298402 Linear solver elapsed time: 0.186602 (63%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.33333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.42 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0485201 Total Core solution elapsed time: 0.305649 Linear solver elapsed time: 0.191515 (63%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.41667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.50 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0483121 Total Core solution elapsed time: 0.306386 Linear solver elapsed time: 0.178801 (58%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.5 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.58 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0456 Total Core solution elapsed time: 0.372944 Linear solver elapsed time: 0.213262 (57%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.58333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/2 time [yr]: 0.67 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0487121 Total Core solution elapsed time: 0.319031 Linear solver elapsed time: 0.189667 (59%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.66667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.75 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0523603 Total Core solution elapsed time: 0.332599 Linear solver elapsed time: 0.19587 (59%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.75 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 0.83 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0387228 Total Core solution elapsed time: 0.261444 Linear solver elapsed time: 0.160955 (62%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.83333 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/2 time [yr]: 0.92 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0340632 Total Core solution elapsed time: 0.236705 Linear solver elapsed time: 0.150585 (64%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 0.91667 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 1.00 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0352029 Total Core solution elapsed time: 0.297539 Linear solver elapsed time: 0.18309 (62%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster Year: 1 STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END STOP NORMAL END checking model consistency marshalling file test4001.bin uploading input file and queuing script launching solution sequence on remote cluster Ice-sheet and Sea-level System Model (ISSM) version 4.24 (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/) call computational core: iteration 1/1 time [yr]: 1.08 (time step: 0.08) computing smb computing new velocity computing basal mass balance computing mass transport call computational core computing new grounding line position updating vertices positions saving temporary results write lock file: FemModel initialization elapsed time: 0.0563632 Total Core solution elapsed time: 0.312737 Linear solver elapsed time: 0.208848 (67%) Total elapsed time: 0 hrs 0 min 0 sec loading results from cluster saving model as: Models/IceOcean.RunCoupledMITgcmISSM SUCCESS difference: 0 < 2e-13 test id: 4001 test name: IceOcean field: Base1 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: Melting1 SUCCESS difference: 9.7e-15 < 8e-06 test id: 4001 test name: IceOcean field: Vx2 SUCCESS difference: 1.5e-14 < 7e-06 test id: 4001 test name: IceOcean field: Vy2 SUCCESS difference: 9.9e-16 < 2e-07 test id: 4001 test name: IceOcean field: Thickness2 SUCCESS difference: 2.5e-16 < 2e-08 test id: 4001 test name: IceOcean field: Base2 SUCCESS difference: 3.4e-16 < 3e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset2 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate2 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: Melting2 SUCCESS difference: 1.2e-14 < 8e-06 test id: 4001 test name: IceOcean field: Vx3 SUCCESS difference: 1.9e-14 < 7e-06 test id: 4001 test name: IceOcean field: Vy3 SUCCESS difference: 1.7e-15 < 4e-07 test id: 4001 test name: IceOcean field: Thickness3 SUCCESS difference: 3.9e-16 < 3e-08 test id: 4001 test name: IceOcean field: Base3 SUCCESS difference: 3.4e-16 < 5e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset3 SUCCESS difference: 0 < 1e-13 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate3 SUCCESS difference: 0 < 6e-08 test id: 4001 test name: IceOcean field: Melting3 SUCCESS difference: 1.1e-14 < 8e-06 test id: 4001 test name: IceOcean field: Vx4 SUCCESS difference: 2.4e-14 < 7e-06 test id: 4001 test name: IceOcean field: Vy4 SUCCESS difference: 2.2e-15 < 5e-07 test id: 4001 test name: IceOcean field: Thickness4 SUCCESS difference: 5.3e-16 < 4e-08 test id: 4001 test name: IceOcean field: Base4 SUCCESS difference: 3.4e-16 < 8e-08 test id: 4001 test name: IceOcean field: MaskOceanLevelset4 SUCCESS difference: 0 < 6e-08 test id: 4001 test name: IceOcean field: FloatingiceMeltingRate4 SUCCESS difference: 0 < 3e-07 test id: 4001 test name: IceOcean field: Melting4 +++ exit code: 0 +++ error: 0 Recording test results Finished: SUCCESS