Started by GitHub push by MathieuMorlighem Running as SYSTEM Building remotely on Windows_10-MSYS2-MinGW-VM (mingw win) in workspace C:\Users\jenkins\Jenkins\workspace\Windows-Basic The recommended git tool is: NONE > git rev-parse --resolve-git-dir C:\Users\jenkins\Jenkins\workspace\Windows-Basic\.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10 Fetching upstream changes from git@github.com:ISSMteam/ISSM.git > git --version # timeout=10 > git --version # 'git version 2.54.0' using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins Verifying host key using known hosts file You're using 'Known hosts file' strategy to verify ssh host keys, but your known_hosts file does not exist, please go to 'Manage Jenkins' -> 'Security' -> 'Git Host Key Verification Configuration' and configure host key verification. > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse "refs/remotes/origin/main^{commit}" # timeout=10 Checking out Revision d000b0d54c75e852d3b2c6eb7cf7af771d75b7e4 (refs/remotes/origin/main) > git config core.sparsecheckout # timeout=10 > git checkout -f d000b0d54c75e852d3b2c6eb7cf7af771d75b7e4 # timeout=10 Commit message: "Merge branch 'main' of github.com:ISSMteam/ISSM" > git rev-list --no-walk b019bb05952cbccd29ecb514efff7e53b48dcad4 # timeout=10 [Windows-Basic] $ C:\msys64\usr\bin\bash C:\Users\jenkins\jenkins15382535970911049860.sh Cleaning up execution directory ====================================================== Determining installation type ====================================================== List of changed files --------------------- src/c/classes/Elements/Element.cpp src/c/classes/Elements/Element.h src/c/classes/FemModel.cpp src/c/classes/Inputs/ControlInput.cpp src/c/classes/IoModel.cpp src/c/classes/IoModel.h src/c/classes/Vertex.cpp src/c/classes/Vertex.h src/c/modules/ModelProcessorx/CreateElementsVerticesAndMaterials.cpp -- checking for changed externalpackages... no -- checking for reconfiguration... yes -- checking for recompilation... yes ====================================================== Skipping msmpi ====================================================== ====================================================== Skipping petsc ====================================================== ====================================================== Skipping triangle ====================================================== ====================================================== Skipping shell2junit ====================================================== ====================================================== Cleaning up and reconfiguring ====================================================== make: *** No rule to make target 'uninstall'. Stop. make: *** No rule to make target 'distclean'. Stop. autoreconf-2.73: export WARNINGS= autoreconf-2.73: Entering directory '.' autoreconf-2.73: configure.ac: no obvious need to run autopoint autoreconf-2.73: running: aclocal --force -I m4 autoreconf-2.73: configure.ac: tracing autoreconf-2.73: configure.ac: creating directory ./aux-config autoreconf-2.73: running: libtoolize --copy --force libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, './aux-config'. libtoolize: copying file './aux-config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' autoreconf-2.73: configure.ac: not using Intltool autoreconf-2.73: configure.ac: not using Gtkdoc autoreconf-2.73: configure.ac: no need to run autopoint (confirmed) autoreconf-2.73: running: aclocal --force -I m4 autoreconf-2.73: running: /usr/bin/autoconf-2.73 --force autoreconf-2.73: running: /usr/bin/autoheader-2.73 --force autoreconf-2.73: running: automake --add-missing --copy --force-missing configure.ac:32: installing './aux-config/ar-lib' configure.ac:22: installing './aux-config/compile' configure.ac:19: installing './aux-config/config.guess' configure.ac:19: installing './aux-config/config.sub' configure.ac:29: installing './aux-config/install-sh' configure.ac:29: installing './aux-config/missing' src/c/Makefile.am: installing './aux-config/depcomp' autoreconf-2.73: './aux-config/config.sub' is updated autoreconf-2.73: './aux-config/config.guess' is updated autoreconf-2.73: configure.ac: not running make: --make not given autoreconf-2.73: Leaving directory '.' configure: ============================================================================ configure: = Ice-sheet and Sea-level System Model (ISSM) 2026.2 configuration = configure: ============================================================================ checking build system type... x86_64-pc-mingw64 checking host system type... x86_64-pc-mingw64 checking target system type... x86_64-pc-mingw64 checking for mpicc... no checking for icc... no checking for cl... no checking for icl... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.exe checking for suffix of executables... .exe checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C23 features... unsupported checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking how to run the C preprocessor... gcc -E checking for mpicxx... no checking for mpic++... no checking for icpc... no checking for cl... no checking for icl... no checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for mpifort... no checking for ifort... no checking for g77... no checking for gfortran... gfortran checking whether the compiler supports GNU Fortran 77... yes checking whether gfortran accepts -g... yes checking for mpifort... no checking for ifort... no checking for gfortran... gfortran checking whether the compiler supports GNU Fortran... yes checking whether gfortran accepts -g... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '197610' is supported by ustar format... yes checking whether GID '197121' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking dependency style of gcc... gcc3 checking dependency style of g++... gcc3 checking for ar... ar checking the archiver (ar) interface... ar checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... C:/msys64/mingw64/x86_64-w64-mingw32/bin/ld.exe checking if the linker (C:/msys64/mingw64/x86_64-w64-mingw32/bin/ld.exe) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /mingw64/bin/nm -B checking the name lister (/mingw64/bin/nm -B) interface... BSD nm checking whether ln -s works... no, using cp -pR checking the maximum length of command line arguments... 8192 checking how to convert x86_64-pc-mingw64 file names to x86_64-pc-mingw64 format... func_convert_file_msys_to_w32 checking how to convert x86_64-pc-mingw64 file names to toolchain format... func_convert_file_msys_to_w32 checking for C:/msys64/mingw64/x86_64-w64-mingw32/bin/ld.exe option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... file_magic ^x86 archive import|^x86 DLL checking for dlltool... dlltool checking how to associate runtime and link libraries... func_cygming_dll_for_implib checking for ranlib... ranlib checking for archiver @FILE support... @ checking for strip... strip checking command to parse /mingw64/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... no checking for as... as checking for dlltool... (cached) dlltool checking for objdump... (cached) objdump checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -DDLL_EXPORT -DPIC checking if gcc PIC flag -DDLL_EXPORT -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (C:/msys64/mingw64/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes checking whether -lc should be explicitly linked in... yes checking dynamic linker characteristics... Win32 ld.exe checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... C:/msys64/mingw64/x86_64-w64-mingw32/bin/ld.exe checking if the linker (C:/msys64/mingw64/x86_64-w64-mingw32/bin/ld.exe) is GNU ld... yes checking whether the g++ linker (C:/msys64/mingw64/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes checking for g++ option to produce PIC... -DDLL_EXPORT -DPIC checking if g++ PIC flag -DDLL_EXPORT -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (C:/msys64/mingw64/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes checking dynamic linker characteristics... Win32 ld.exe checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -DDLL_EXPORT checking if gfortran PIC flag -DDLL_EXPORT works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (C:/msys64/mingw64/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes checking dynamic linker characteristics... Win32 ld.exe checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -DDLL_EXPORT checking if gfortran PIC flag -DDLL_EXPORT works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (C:/msys64/mingw64/x86_64-w64-mingw32/bin/ld.exe) supports shared libraries... yes checking dynamic linker characteristics... Win32 ld.exe checking how to hardcode library paths into programs... immediate configure: ============================================================================ configure: = Checking ISSM specific options = configure: ============================================================================ checking for date... /usr/bin/date checking for build date... Wed Jul 1 16:38:53 PDT 2026 checking user name... jenkins checking host full OS name and version... mingw64 checking host cpu... x86_64 checking vendor... pc checking host OS name... mingw64 checking host OS version... 64 checking host OS architecture... x86_64 checking for debugging support... yes checking for development support... yes checking for standalone modules build... no checking for standalone executables build... no checking for standalone libraries build... no checking for wrappers compilation... yes checking operating system type... Windows (MSYS2 MinGW) checking for Xlib (graphics library)... done checking for MATLAB... yes checking MATLAB's mex compilation flags... done checking for JavaScript... no checking for triangle... configure: error: Triangle directory provided (/c/Users/jenkins/Jenkins/workspace/Windows-Basic/externalpackages/triangle/install) does not exist! ISSM configuration failed (see options below) \ --prefix=${ISSM_DIR} \ --enable-development \ --enable-debugging \ --with-numthreads=4 \ --with-matlab-dir="${MATLAB_PATH}" \ --with-mpi-include="${MSMPI_ROOT}/include" \ --with-mpi-libdir="-Wl,-L${MSMPI_ROOT}/lib" \ --with-mpi-libflags="-Wl,-lmsmpi" \ --with-fortran-lib="-Wl,-L/c/msys64/mingw64/lib -Wl,-lgfortran" \ --with-metis-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-parmetis-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-blas-lapack-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-scalapack-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-mumps-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-petsc-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-triangle-dir="${ISSM_DIR}/externalpackages/triangle/install" \ ISSM configuration failed! Build step 'Execute shell' marked build as failure Recording test results Finished: FAILURE