Debian Linux - Binaries - Python 3 Git changeshttps://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/changesDebian Linux - Binaries - Python 3 Git changes#180 CHG: Updating all nightlies to PETSc 3.25 as earlier versions do not play nicely with CMake 4 (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail0view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail0Fri, 18 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>jenkins/ross-debian_linux-full jenkins/ross-debian_linux-adolc-ampion jenkins/mac-intel-solid_earth jenkins/mac-silicon-basic jenkins/mac-silicon-examples jenkins/ross-debian_linux-full-valgrind jenkins/mac-silicon-python jenkins/mac-silicon-dakota jenkins/ross-debian_linux-solid_earth jenkins/mac-silicon-solid_earth jenkins/mac-intel-binaries-matlab jenkins/mac-intel-dakota externalpackages/petsc/install-3.25-linux-static.sh jenkins/mac-intel-binaries-python-3 jenkins/mac-silicon-binaries-python-3 jenkins/mac-silicon-full jenkins/ross-debian_linux-binaries-python-3 jenkins/ross-debian_linux-codipack jenkins/mac-intel-examples externalpackages/petsc/install-3.25-mac-static.sh jenkins/ross-debian_linux-full-mplapack externalpackages/petsc/install-3.25-win-msys2-mingw-msmpi-static.sh jenkins/mac-silicon-binaries-matlab jenkins/ross-debian_linux-iceocean jenkins/ross-debian_linux-basic jenkins/ross-debian_linux-binaries-matlab jenkins/ross-debian_linux-python jenkins/mac-intel-full jenkins/ross-debian_linux-dakota externalpackages/petsc/install-3.25-win-msys2-mingw-msmpi.sh jenkins/ross-debian_linux-adolc-ampioff externalpackages/petsc/install-3.25-mac.sh jenkins/mac-intel-basic #180 CHG: Reverting to 3.31.12 as there is still an issue with Dakota 6.2 and CMake > 3 and I don't have time to fix it right now (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail1view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail1Fri, 18 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>externalpackages/cmake/install.sh #180 NEW: working on calving stochastic (mmorligh)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail2view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail2Fri, 18 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/c/shared/Enum/issmenums.jl src/c/shared/Enum/Enumjl.vim src/c/shared/Enum/StringToEnumx.cpp src/c/modules/Calvingx/Calvingx.cpp src/m/classes/calvingstochastic.m src/c/shared/Enum/EnumDefinitions.h src/c/modules/Calvingx/Calvingx.h src/c/shared/Enum/EnumToStringx.cpp src/c/shared/Enum/Enum.vim src/c/classes/Elements/Tria.cpp src/c/analyses/LevelsetAnalysis.cpp #180 CHG: fixing calving law that requires effective strain rate (mmorligh)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail3view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail3Fri, 18 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/c/classes/Elements/Tria.cpp #180 CHG: finished calving propagation through connectivity (mmorligh)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail4view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail4Fri, 18 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/c/analyses/LevelsetAnalysis.cpp #180 CHG: replaced d by chi (mmorligh)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail5view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail5Fri, 18 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/c/modules/Calvingx/Calvingx.cpp #180 CHG: Do not treat free-form Fortran line length warning as an error. (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail6view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail6Fri, 18 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>externalpackages/petsc/install-3.25-mac-static.sh externalpackages/petsc/install-3.25-linux-static.sh #180 CHG: Adjusted tolerances (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail7view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail7Fri, 18 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>test/NightlyRun/test340.m test/NightlyRun/test340.py #180 CHG: Coerce the element array to int64. (inwoo0415)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail8view/Linux/job/Debian_Linux-Binaries-Python_3/180/changes#detail8Fri, 18 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/netcdf/read_netCDF.py src/m/netcdf/read_netCDF.m #178 CHG: Updating CMake version (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/178/changes#detail0view/Linux/job/Debian_Linux-Binaries-Python_3/178/changes#detail0Tue, 15 Sep 2026 14:06:32 -0700ISSM - Jenkins <issm.jpl@gmail.com>externalpackages/cmake/install.sh #177 CHG: Updating mirror for Autotools packages; formatting (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/177/changes#detail0view/Linux/job/Debian_Linux-Binaries-Python_3/177/changes#detail0Tue, 15 Sep 2026 11:37:16 -0700ISSM - Jenkins <issm.jpl@gmail.com>jenkins/jenkins.sh externalpackages/autotools/install-mac.sh externalpackages/autotools/install-linux.sh #177 NEW: starting new calving law implementation with Doug's Stochastic function (mathieu.morlighem)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/177/changes#detail1view/Linux/job/Debian_Linux-Binaries-Python_3/177/changes#detail1Tue, 15 Sep 2026 11:37:16 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/c/shared/Enum/issmenums.jl src/c/shared/Enum/Enumjl.vim src/c/shared/Enum/StringToEnumx.cpp src/m/classes/calvingstochastic.m src/c/shared/Enum/EnumDefinitions.h src/c/shared/Enum/EnumToStringx.cpp src/c/shared/Enum/Enum.vim src/c/shared/io/Marshalling/IoCodeConversions.cpp #177 CHG: cosmetics (mathieu.morlighem)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/177/changes#detail2view/Linux/job/Debian_Linux-Binaries-Python_3/177/changes#detail2Tue, 15 Sep 2026 11:37:16 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/friction.m #175 CHG: Strongly recommended to use the “.nc” extension when writing or reading NetCDF files. Without the extension, the file name can easily be confused with “.mat” files, which may lead to unexpected behavior or misinterpretation. (#183) (noreply)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/175/changes#detail0view/Linux/job/Debian_Linux-Binaries-Python_3/175/changes#detail0Tue, 15 Sep 2026 10:16:24 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/netcdf/read_netCDF.py src/m/netcdf/read_netCDF.m src/m/netcdf/write_netCDF.py src/m/netcdf/write_netCDF.m #175 BUG: Fix typo. (inwoopark0415)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/175/changes#detail1view/Linux/job/Debian_Linux-Binaries-Python_3/175/changes#detail1Tue, 15 Sep 2026 10:16:24 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/netcdf/read_netCDF.py #175 CHG: Coerce elements to integer when reading netcd file. (inwoopark0415)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/175/changes#detail2view/Linux/job/Debian_Linux-Binaries-Python_3/175/changes#detail2Tue, 15 Sep 2026 10:16:24 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/netcdf/read_netCDF.py src/m/netcdf/read_netCDF.m #175 CHG: Synchronize Matlab > Python in plotmodel and fix issue in "pairoptions" function. (#184) (noreply)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/175/changes#detail3view/Linux/job/Debian_Linux-Binaries-Python_3/175/changes#detail3Tue, 15 Sep 2026 10:16:24 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/plotoptions.py src/m/plot/plotmodel.py src/m/classes/pairoptions.py src/m/plot/applyoptions.py src/m/plot/plot_unit.py #172 ADD: a test for the friction emulator and a started the 5000 series of test for future ML models (tom.yinmin.liu)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/172/changes#detail0view/Linux/job/Debian_Linux-Binaries-Python_3/172/changes#detail0Mon, 14 Sep 2026 18:09:08 -0700ISSM - Jenkins <issm.jpl@gmail.com>test/NightlyRun/test5001.m test/Data/friction_emulator/model_sqrt_weighted_standard.pt test/Data/friction_emulator/friction_emulator.py test/Archives/Archive5001.arch #172 CHG:relax test5001 tolerances (tom.yinmin.liu)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/172/changes#detail1view/Linux/job/Debian_Linux-Binaries-Python_3/172/changes#detail1Mon, 14 Sep 2026 18:09:08 -0700ISSM - Jenkins <issm.jpl@gmail.com>test/NightlyRun/test5001.m #172 BUG:Exclude test5001 from Linux and macOS MATLAB binaries tests (tom.yinmin.liu)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/172/changes#detail2view/Linux/job/Debian_Linux-Binaries-Python_3/172/changes#detail2Mon, 14 Sep 2026 18:09:08 -0700ISSM - Jenkins <issm.jpl@gmail.com>packagers/mac/test-issm-mac-binaries-matlab.sh packagers/mac/complete-issm-mac-silicon-binaries-matlab.sh packagers/mac/complete-issm-mac-intel-binaries-matlab.sh packagers/linux/complete-issm-linux-binaries-matlab.sh #169 CHG: removed --enable-ad that was dead code and fixed POSIX syntax that can be problematic (mathieu.morlighem)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail0view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail0Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>m4/issm_options.m4 #169 CHG: some clusters do not have etcpath (mathieu.morlighem)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail1view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail1Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/clusters/cluster_defaults.m src/m/classes/clusters/cluster_defaults.py #169 FIX: update pfe options (helene.l.seroussi)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail2view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail2Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/clusters/pfe.py src/m/classes/clusters/pfe.m #169 CHF: changed defaults for pfe (helene.l.seroussi)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail3view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail3Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/clusters/pfe.py src/m/classes/clusters/pfe.m #169 CHG: wrong path to environment.sh (mathieu.morlighem)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail4view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail4Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/clusters/pfe.m #169 CHG: removing unnecessary print (mathieu.morlighem)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail5view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail5Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/os/issmscpout.m #169 Archive updates for CoDiPack tests; adjusted tolerances (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail6view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail6Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>test/Archives/Archive3201.arch test/Archives/Archive3204.arch test/Archives/Archive3206.arch test/Archives/Archive3480.arch test/Archives/Archive3205.arch test/NightlyRun/test803.m test/Archives/Archive3202.arch test/NightlyRun/test803.py test/Archives/Archive3203.arch #169 CHG: updated all node options for pleiades (helene.l.seroussi)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail7view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail7Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/clusters/pfe.m src/m/classes/clusters/pfe.py #169 Some changes and some reversions for Windows (still not passing all tests) (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail8view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail8Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>etc/environment.sh externalpackages/petsc/install-3.25-win-msys2-mingw-msmpi.sh externalpackages/petsc/install-3.25-win-msys2-mingw-msmpi-static.sh m4/issm_options.m4 jenkins/ross-win-msys2-mingw-msmpi-binaries-matlab jenkins/ross-win-msys2-mingw-msmpi-basic src/c/Makefile.am #169 Corrected MSMPI_ROOT path (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail9view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail9Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>etc/environment.sh #169 Updated examples datasets download script to handle pulling from GitHub documentation (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail10view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail10Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>scripts/DownloadExamplesDatasets.sh #169 Better way of stripping transient step coloring for test parsing; updated ignore list (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail11view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail11Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>jenkins/jenkins.sh .gitignore #169 Needed to do local install of MS-MPI again (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail12view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail12Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>jenkins/ross-win-msys2-mingw-msmpi-basic #169 CHG: Add stricter consistency checks for friction.coupling=4 (effective pressure from hydrology model). (inwoopark0415)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail13view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail13Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/friction.m src/m/classes/friction.py #169 Reverting changes to Gmsh install scripts (if you need a new major version, create copy and edit the install script); added major version 5 to gmshplanet allowlist (34657535+TidbitSoftware)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail14view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail14Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/mesh/planet/gmshplanet.m externalpackages/gmsh/install-4-pleiades.sh externalpackages/gmsh/install-4-mac.sh externalpackages/gmsh/install-4-linux.sh externalpackages/gmsh/install-4-linux-static.sh externalpackages/gmsh/install-4-mac-static.sh src/m/mesh/planet/gmshplanet.py #169 CHG: in checkconsistency use checkmessage instead of erroring out (mathieu.morlighem)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail15view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail15Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/friction.m src/m/classes/transient.m src/m/classes/friction.py #169 CHG: Synchronize Matlab to Python. Add HydrologyPrescribeAnalysis in TransientSolution and HydrologySolution. (inwoopark0415)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail16view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail16Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/consistency/ismodelselfconsistent.py #169 CHG: fix consistency check for "frictionschoof" with coupling=4 as like "friction.m". (inwoopark0415)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail17view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail17Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/frictionschoof.m src/m/classes/frictionschoof.py #169 CHG: fix typos. (inwoopark0415)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail18view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail18Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/frictionschoof.m #169 CHG: Enable effective_pressure collapse in friction and add support for frictionschoof collapse. (inwoopark0415)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail19view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail19Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/model.m src/m/classes/model.py #169 CHG: gadi cluster makes *.lock file. (inwoopark0415)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail20view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail20Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/m/classes/clusters/gadi.m src/m/classes/clusters/gadi.py #169 FIX: ocean connection mask should only be 0 or 1 (helene.l.seroussi)https://ross.ics.uci.edu/jenkins/view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail21view/Linux/job/Debian_Linux-Binaries-Python_3/169/changes#detail21Fri, 4 Sep 2026 04:47:00 -0700ISSM - Jenkins <issm.jpl@gmail.com>src/c/modules/MapOceanConnectivityx/MapOceanConnectivityx.cpp