Started by GitHub push by MathieuMorlighem Started by GitHub push by MathieuMorlighem Running as SYSTEM Building remotely on Debian_12-VM (debian linux) in workspace /home/jenkins/workspace/Debian_Linux-CoDiPack The recommended git tool is: NONE > git rev-parse --resolve-git-dir /home/jenkins/workspace/Debian_Linux-CoDiPack/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10 Fetching upstream changes from git@github.com:ISSMteam/ISSM.git > git --version # timeout=10 > git --version # 'git version 2.39.5' using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins Verifying host key using known hosts file > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/main^{commit} # timeout=10 Checking out Revision cb5429a9c9240b58811f8c1bdc98120b66802275 (refs/remotes/origin/main) > git config core.sparsecheckout # timeout=10 > git checkout -f cb5429a9c9240b58811f8c1bdc98120b66802275 # timeout=10 Commit message: "CHG: making sure scaling factor is >0 and not NaN" > git rev-list --no-walk 342ae88469b1a293f8d24aee3a009e23fd0de054 # timeout=10 [Debian_Linux-CoDiPack] $ /bin/bash /tmp/jenkins17358106456707155152.sh Cleaning up execution directory ====================================================== Determining installation type ====================================================== List of changed files --------------------- src/c/cores/controladm1qn3_core.cpp src/m/classes/independent.m src/m/classes/independent.py -- checking for changed externalpackages... no -- checking for reconfiguration... no -- checking for recompilation... yes ====================================================== Skipping autotools ====================================================== ====================================================== Skipping cmake ====================================================== ====================================================== Skipping petsc ====================================================== ====================================================== Skipping gsl ====================================================== ====================================================== Skipping triangle ====================================================== ====================================================== Skipping m1qn3 ====================================================== ====================================================== Skipping medipack ====================================================== ====================================================== Skipping codipack ====================================================== ====================================================== Skipping semic ====================================================== ====================================================== Skipping shell2junit ====================================================== ====================================================== Compiling ISSM ====================================================== Making with 8 CPUs make all-recursive make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' Making all in src make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' Making all in c make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' CXX cores/libISSMCore_la-controladm1qn3_core.lo CXXLD libISSMCore.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD libISSMModules.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD issm.exe CXXLD issm_slc.exe make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' Making all in m make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' Making all in wrappers make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' Making all in matlab make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' CXXLD libISSMMatlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD BamgConvertMesh_matlab.la CXXLD BamgTriangulate_matlab.la CXXLD BamgMesher_matlab.la CXXLD ContourToMesh_matlab.la CXXLD ContourToNodes_matlab.la CXXLD ExpSimplify_matlab.la CXXLD DistanceToMaskBoundary_matlab.la CXXLD ElementConnectivity_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ExpToLevelSet_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD InterpFromGridToMesh_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD InterpFromMesh2d_matlab.la CXXLD InterpFromMeshToGrid_matlab.la CXXLD InterpFromMeshToMesh2d_matlab.la CXXLD InterpFromMeshToMesh3d_matlab.la CXXLD IssmConfig_matlab.la CXXLD MeshPartition_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD MeshProfileIntersection_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD NodeConnectivity_matlab.la CXXLD PointCloudFindNeighbors_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ProcessRifts_matlab.la CXXLD PropagateFlagsFromConnectivity_matlab.la CXXLD Triangle_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' Making install in src make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' Making install in c make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' CXXLD issm.exe CXXLD issm_slc.exe make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' CXXLD issm.exe CXXLD issm_slc.exe /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libISSMCore.la libISSMOverload.la libISSMModules.la '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' libtool: install: /usr/bin/install -c .libs/libISSMCore.so /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.so libtool: install: /usr/bin/install -c .libs/libISSMCore.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.la libtool: install: /usr/bin/install -c .libs/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.so libtool: install: /usr/bin/install -c .libs/libISSMOverload.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.la libtool: warning: relinking 'libISSMModules.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/c; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -g -O2 -std=c++17 -g -O2 -std=c++17 -avoid-version -o libISSMModules.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ./shared/Threads/libISSMModules_la-LaunchThread.lo ./shared/Threads/libISSMModules_la-PartitionRange.lo ./shared/Exp/libISSMModules_la-exp.lo ./shared/Triangle/libISSMModules_la-AssociateSegmentToElement.lo ./shared/Triangle/libISSMModules_la-GridInsideHole.lo ./shared/Triangle/libISSMModules_la-OrderSegments.lo ./shared/Triangle/libISSMModules_la-SplitMeshForRifts.lo ./shared/Triangle/libISSMModules_la-TriangleUtils.lo ./modules/Trianglex/libISSMModules_la-Trianglex.lo ./modules/ProcessRiftsx/libISSMModules_la-ProcessRiftsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo ./modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo ./modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo ./modules/InterpFromMeshToGridx/libISSMModules_la-InterpFromMeshToGridx.lo ./modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo ./modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo ./modules/NodeConnectivityx/libISSMModules_la-NodeConnectivityx.lo ./modules/ElementConnectivityx/libISSMModules_la-ElementConnectivityx.lo ./modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo ./libISSMCore.la -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/triangle/install/lib -ltriangle -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lflapack -lfblas ) libtool: install: /usr/bin/install -c .libs/libISSMModules.soT /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.so libtool: install: /usr/bin/install -c .libs/libISSMModules.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.la libtool: install: /usr/bin/install -c .libs/libISSMCore.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.a libtool: install: /usr/bin/install -c .libs/libISSMOverload.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.a libtool: install: /usr/bin/install -c .libs/libISSMModules.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.a libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-CoDiPack/aux-config:/home/jenkins/workspace/Debian_Linux-CoDiPack/scripts:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ---------------------------------------------------------------------- Libraries have been installed in: /home/jenkins/workspace/Debian_Linux-CoDiPack/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c issm.exe issm_slc.exe '/home/jenkins/workspace/Debian_Linux-CoDiPack/bin' libtool: install: /usr/bin/install -c .libs/issm.exe /home/jenkins/workspace/Debian_Linux-CoDiPack/bin/issm.exe libtool: install: /usr/bin/install -c .libs/issm_slc.exe /home/jenkins/workspace/Debian_Linux-CoDiPack/bin/issm_slc.exe make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' Making install in m make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' Making install in wrappers make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' Making install in matlab make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' /bin/bash ../../../libtool --mode=install /usr/bin/install -c libISSMMatlab.la libISSMApi_matlab.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromGrid.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Triangle_matlab.la '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' libtool: warning: relinking 'libISSMMatlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -avoid-version -o libISSMMatlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ./io/libISSMMatlab_la-CheckNumMatlabArguments.lo ./io/libISSMMatlab_la-FetchMatlabData.lo ./io/libISSMMatlab_la-WriteMatlabData.lo ./../../c/libISSMCore.la ./../../c/libISSMModules.la -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -ldmumps -lmumps_common -lpord -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lscalapack -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lflapack -lfblas -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lparmetis -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lmetis -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/gsl/install/lib -lgsl -lgslcblas -lm -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/libISSMMatlab.soT /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.so libtool: install: /usr/bin/install -c .libs/libISSMMatlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.la libtool: install: /usr/bin/install -c .libs/libISSMApi_matlab.so /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi_matlab.so libtool: install: /usr/bin/install -c .libs/libISSMApi_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi_matlab.la libtool: warning: relinking 'BamgConvertMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgConvertMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../BamgConvertMesh/BamgConvertMesh_matlab_la-BamgConvertMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.la libtool: warning: relinking 'BamgMesher_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgMesher_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../BamgMesher/BamgMesher_matlab_la-BamgMesher.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.la libtool: warning: relinking 'BamgTriangulate_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgTriangulate_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../BamgTriangulate/BamgTriangulate_matlab_la-BamgTriangulate.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.la libtool: warning: relinking 'ContourToMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ContourToMesh/ContourToMesh_matlab_la-ContourToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.la libtool: warning: relinking 'ContourToNodes_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToNodes_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ContourToNodes/ContourToNodes_matlab_la-ContourToNodes.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.la libtool: warning: relinking 'DistanceToMaskBoundary_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o DistanceToMaskBoundary_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../DistanceToMaskBoundary/DistanceToMaskBoundary_matlab_la-DistanceToMaskBoundary.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.la libtool: warning: relinking 'ElementConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ElementConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ElementConnectivity/ElementConnectivity_matlab_la-ElementConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.la libtool: warning: relinking 'ExpSimplify_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpSimplify_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ExpSimplify/ExpSimplify_matlab_la-ExpSimplify.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.la libtool: warning: relinking 'ExpToLevelSet_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpToLevelSet_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ExpToLevelSet/ExpToLevelSet_matlab_la-ExpToLevelSet.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.la libtool: warning: relinking 'InterpFromGridToMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromGridToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromGridToMesh/InterpFromGridToMesh_matlab_la-InterpFromGridToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.la libtool: install: /usr/bin/install -c .libs/InterpFromGrid.mexa64 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGrid.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromGrid.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGrid.la libtool: warning: relinking 'InterpFromMesh2d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMesh2d/InterpFromMesh2d_matlab_la-InterpFromMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.la libtool: warning: relinking 'InterpFromMeshToGrid_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToGrid_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMeshToGrid/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.la libtool: warning: relinking 'InterpFromMeshToMesh2d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.la libtool: warning: relinking 'InterpFromMeshToMesh3d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh3d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.la libtool: warning: relinking 'IssmConfig_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o IssmConfig_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../IssmConfig/IssmConfig_matlab_la-IssmConfig.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.la libtool: warning: relinking 'MeshPartition_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshPartition_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../MeshPartition/MeshPartition_matlab_la-MeshPartition.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.la libtool: warning: relinking 'MeshProfileIntersection_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshProfileIntersection_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../MeshProfileIntersection/MeshProfileIntersection_matlab_la-MeshProfileIntersection.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.la libtool: warning: relinking 'NodeConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o NodeConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../NodeConnectivity/NodeConnectivity_matlab_la-NodeConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.la libtool: warning: relinking 'PointCloudFindNeighbors_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PointCloudFindNeighbors_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../PointCloudFindNeighbors/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.la libtool: warning: relinking 'ProcessRifts_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ProcessRifts_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ProcessRifts/ProcessRifts_matlab_la-ProcessRifts.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.la libtool: warning: relinking 'PropagateFlagsFromConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PropagateFlagsFromConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran ) libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.la libtool: warning: relinking 'Triangle_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++17 -g -O2 -std=c++17 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Triangle_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../Triangle/Triangle_matlab_la-Triangle.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/triangle/install/lib -ltriangle ) libtool: install: /usr/bin/install -c .libs/Triangle_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/Triangle_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.la libtool: install: /usr/bin/install -c .libs/libISSMMatlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.a libtool: install: /usr/bin/install -c .libs/libISSMApi_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi_matlab.a libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.a libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.a libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.a libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.a libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.a libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.a libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.a libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.a libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromGrid.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGrid.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGrid.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGrid.a libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.a libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.a libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.a libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.a libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.a libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.a libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.a libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.a libtool: install: /usr/bin/install -c .libs/Triangle_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.a libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-CoDiPack/aux-config:/home/jenkins/workspace/Debian_Linux-CoDiPack/scripts:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ---------------------------------------------------------------------- Libraries have been installed in: /home/jenkins/workspace/Debian_Linux-CoDiPack/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' +++ Removing old junit reports from: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog/results +++ Running case: MATLAB-3015 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero boundary conditions for stressbalance model: spc set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.723535 Total Core solution elapsed time: 0.554103 Linear solver elapsed time: 0.490634 (89%) Total elapsed time: 0 hrs 0 min 1 sec boundary conditions for stressbalance model: spc set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.044412 Total Core solution elapsed time: 0.0369501 Linear solver elapsed time: 0.0128103 (35%) Total elapsed time: 0 hrs 0 min 0 sec boundary conditions for stressbalance model: spc set as zero model not consistent: NaN values found in field 'autodiff.independents{1}.control_scaling_factor' Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md); Error in test3015 (line 81) md=solve(md,'Masstransport'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3015 test name: SquareShelfConstrainedMasstransp2dAdolcForwardDifference field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3015 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero boundary conditions for stressbalance model: spc set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.723535 Total Core solution elapsed time: 0.554103 Linear solver elapsed time: 0.490634 (89%) Total elapsed time: 0 hrs 0 min 1 sec boundary conditions for stressbalance model: spc set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.044412 Total Core solution elapsed time: 0.0369501 Linear solver elapsed time: 0.0128103 (35%) Total elapsed time: 0 hrs 0 min 0 sec boundary conditions for stressbalance model: spc set as zero model not consistent: NaN values found in field 'autodiff.independents{1}.control_scaling_factor' Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md); Error in test3015 (line 81) md=solve(md,'Masstransport'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3015 test name: SquareShelfConstrainedMasstransp2dAdolcForwardDifference field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3119 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: NaN values found in field 'autodiff.independents{1}.control_scaling_factor' Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md); Error in test3119 (line 18) md=solve(md,'Transient'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3119 test name: ReverseScalarDriver field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3119 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: NaN values found in field 'autodiff.independents{1}.control_scaling_factor' Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md); Error in test3119 (line 18) md=solve(md,'Transient'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3119 test name: ReverseScalarDriver field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3201 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.826187 Total Core solution elapsed time: 1.05662 Linear solver elapsed time: 0.780568 (74%) Total elapsed time: 0 hrs 0 min 1 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)= 26716 1.83e+04 1.104e-26 2.893e-26 6.644e-25 3.122e-24 178.5 885 2.54e+04 248.5 2 f(x)= 10514 2.17e+04 37.78 98.63 2166 67.41 61.31 253.7 7473 355.7 3 f(x)= 5480.1 8.46e+03 2.609 7.986 65.69 4.452 108.5 629.4 4520 141.5 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.144854 Total Core solution elapsed time: 0.422344 Linear solver elapsed time: 0.0198571 (4.7%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 2.3e-14 < 1e-12 test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: Gradient SUCCESS difference: 2.1e-14 < 1e-12 test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: Misfit SUCCESS difference: 3.6e-15 < 1e-12 test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: Rheology +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3201 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.826187 Total Core solution elapsed time: 1.05662 Linear solver elapsed time: 0.780568 (74%) Total elapsed time: 0 hrs 0 min 1 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)= 26716 1.83e+04 1.104e-26 2.893e-26 6.644e-25 3.122e-24 178.5 885 2.54e+04 248.5 2 f(x)= 10514 2.17e+04 37.78 98.63 2166 67.41 61.31 253.7 7473 355.7 3 f(x)= 5480.1 8.46e+03 2.609 7.986 65.69 4.452 108.5 629.4 4520 141.5 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.144854 Total Core solution elapsed time: 0.422344 Linear solver elapsed time: 0.0198571 (4.7%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 2.3e-14 < 1e-12 test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: Gradient SUCCESS difference: 2.1e-14 < 1e-12 test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: Misfit SUCCESS difference: 3.6e-15 < 1e-12 test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: Rheology +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3202 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0301859 Total Core solution elapsed time: 0.0843355 Linear solver elapsed time: 0.0316627 (38%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)= 22111 1.93e+04 4.98e-29 6.618e-29 1.055e-28 6.827e-25 143 656.2 2.114e+04 168.7 2 f(x)= 6555.5 1.69e+04 34.09 100.4 1843 61.21 30.67 152.7 4146 187 3 f(x)= 2512.1 6.36e+03 2.458 8.109 36.32 3.865 72.45 397.1 1919 72.41 4 f(x)= 1361.2 2.52e+03 3.688 12.3 31.33 5.808 52.61 303.7 892.5 59.2 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0765118 Total Core solution elapsed time: 0.524454 Linear solver elapsed time: 0.0177172 (3.4%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 7.8e-14 < 2e-12 test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: Gradient SUCCESS difference: 1.6e-14 < 1e-12 test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: Misfit SUCCESS difference: 2.1e-15 < 1e-12 test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: Rheology +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3202 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0301859 Total Core solution elapsed time: 0.0843355 Linear solver elapsed time: 0.0316627 (38%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)= 22111 1.93e+04 4.98e-29 6.618e-29 1.055e-28 6.827e-25 143 656.2 2.114e+04 168.7 2 f(x)= 6555.5 1.69e+04 34.09 100.4 1843 61.21 30.67 152.7 4146 187 3 f(x)= 2512.1 6.36e+03 2.458 8.109 36.32 3.865 72.45 397.1 1919 72.41 4 f(x)= 1361.2 2.52e+03 3.688 12.3 31.33 5.808 52.61 303.7 892.5 59.2 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0765118 Total Core solution elapsed time: 0.524454 Linear solver elapsed time: 0.0177172 (3.4%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 7.8e-14 < 2e-12 test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: Gradient SUCCESS difference: 1.6e-14 < 1e-12 test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: Misfit SUCCESS difference: 2.1e-15 < 1e-12 test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: Rheology +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3203 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0327816 Total Core solution elapsed time: 0.530121 Linear solver elapsed time: 0.123371 (23%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)=2.2088e+23 4.18e+15 6.229e+22 7.4e+22 8.458e+22 2 f(x)=2.2088e+23 0 6.229e+22 7.4e+22 8.458e+22 3 f(x)=2.2088e+23 0 6.229e+22 7.4e+22 8.458e+22 4 f(x)=2.2088e+23 0 6.229e+22 7.4e+22 8.458e+22 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.101732 Total Core solution elapsed time: 3.05769 Linear solver elapsed time: 0.112689 (3.7%) Total elapsed time: 0 hrs 0 min 3 sec SUCCESS difference: 0 < 1e-12 test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: Gradient SUCCESS difference: 2.1e-15 < 1e-12 test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: Misfit SUCCESS difference: 0 < 1e-12 test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: Rheology +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3203 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0327816 Total Core solution elapsed time: 0.530121 Linear solver elapsed time: 0.123371 (23%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)=2.2088e+23 4.18e+15 6.229e+22 7.4e+22 8.458e+22 2 f(x)=2.2088e+23 0 6.229e+22 7.4e+22 8.458e+22 3 f(x)=2.2088e+23 0 6.229e+22 7.4e+22 8.458e+22 4 f(x)=2.2088e+23 0 6.229e+22 7.4e+22 8.458e+22 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.101732 Total Core solution elapsed time: 3.05769 Linear solver elapsed time: 0.112689 (3.7%) Total elapsed time: 0 hrs 0 min 3 sec SUCCESS difference: 0 < 1e-12 test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: Gradient SUCCESS difference: 2.1e-15 < 1e-12 test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: Misfit SUCCESS difference: 0 < 1e-12 test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: Rheology +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3204 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0229524 Total Core solution elapsed time: 0.0660896 Linear solver elapsed time: 0.0230243 (35%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 1 f(x)= 26716 1.83e+04 7.072e-29 1.054e-28 2.928e-28 1.443e-24 178.5 885 2.54e+04 248.5 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 2 f(x)= 10514 2.17e+04 37.78 98.63 2166 67.41 61.31 253.7 7473 355.7 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 3 f(x)= 5480.1 8.46e+03 2.609 7.986 65.69 4.452 108.5 629.4 4520 141.5 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0822452 Total Core solution elapsed time: 0.816206 Linear solver elapsed time: 0.0227751 (2.8%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 4.3e-14 < 1e-12 test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: Gradient SUCCESS difference: 3.1e-14 < 1e-12 test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: Misfit SUCCESS difference: 4.4e-15 < 1e-12 test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: Rheology +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3204 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0229524 Total Core solution elapsed time: 0.0660896 Linear solver elapsed time: 0.0230243 (35%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 1 f(x)= 26716 1.83e+04 7.072e-29 1.054e-28 2.928e-28 1.443e-24 178.5 885 2.54e+04 248.5 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 2 f(x)= 10514 2.17e+04 37.78 98.63 2166 67.41 61.31 253.7 7473 355.7 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 3 f(x)= 5480.1 8.46e+03 2.609 7.986 65.69 4.452 108.5 629.4 4520 141.5 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0822452 Total Core solution elapsed time: 0.816206 Linear solver elapsed time: 0.0227751 (2.8%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 4.3e-14 < 1e-12 test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: Gradient SUCCESS difference: 3.1e-14 < 1e-12 test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: Misfit SUCCESS difference: 4.4e-15 < 1e-12 test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: Rheology +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3205 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0216487 Total Core solution elapsed time: 0.0731776 Linear solver elapsed time: 0.0267157 (37%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 1 f(x)= 22111 1.93e+04 5.403e-27 1.646e-26 4.881e-25 4.548e-24 143 656.2 2.114e+04 168.7 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 2 f(x)= 6555.5 1.69e+04 34.09 100.4 1843 61.21 30.67 152.7 4146 187 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 3 f(x)= 2512.1 6.36e+03 2.458 8.109 36.32 3.865 72.45 397.1 1919 72.41 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 4 f(x)= 1361.2 2.52e+03 3.688 12.3 31.33 5.808 52.61 303.7 892.5 59.2 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0916455 Total Core solution elapsed time: 1.07436 Linear solver elapsed time: 0.0244396 (2.3%) Total elapsed time: 0 hrs 0 min 1 sec SUCCESS difference: 2.1e-13 < 1e-12 test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: Gradient SUCCESS difference: 1.9e-14 < 1e-12 test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: Misfit SUCCESS difference: 6.8e-15 < 1e-12 test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: Rheology +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3205 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0216487 Total Core solution elapsed time: 0.0731776 Linear solver elapsed time: 0.0267157 (37%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 1 f(x)= 22111 1.93e+04 5.403e-27 1.646e-26 4.881e-25 4.548e-24 143 656.2 2.114e+04 168.7 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 2 f(x)= 6555.5 1.69e+04 34.09 100.4 1843 61.21 30.67 152.7 4146 187 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 3 f(x)= 2512.1 6.36e+03 2.458 8.109 36.32 3.865 72.45 397.1 1919 72.41 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 4 f(x)= 1361.2 2.52e+03 3.688 12.3 31.33 5.808 52.61 303.7 892.5 59.2 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0916455 Total Core solution elapsed time: 1.07436 Linear solver elapsed time: 0.0244396 (2.3%) Total elapsed time: 0 hrs 0 min 1 sec SUCCESS difference: 2.1e-13 < 1e-12 test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: Gradient SUCCESS difference: 1.9e-14 < 1e-12 test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: Misfit SUCCESS difference: 6.8e-15 < 1e-12 test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: Rheology +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3206 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0271377 Total Core solution elapsed time: 0.401638 Linear solver elapsed time: 0.0542017 (13%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 1 f(x)=1.6268e+06 3.32e+06 6.728e-29 36.23 1.11e+04 103.5 1.616e+06 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 2 f(x)= 16896 1.31e+04 0.0009795 185.1 1.598e+04 612.3 115.3 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 3 f(x)= 16856 9.46e+03 0.001043 185.6 1.597e+04 613.8 86.16 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.158157 Total Core solution elapsed time: 2.99377 Linear solver elapsed time: 0.0731312 (2.4%) Total elapsed time: 0 hrs 0 min 3 sec SUCCESS difference: 3.6e-14 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Gradient1 SUCCESS difference: 1.8e-12 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Gradient2 SUCCESS difference: 7.2e-16 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Misfit SUCCESS difference: 3.3e-16 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Rheology SUCCESS difference: 6.6e-16 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: DeepMelt +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3206 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0271377 Total Core solution elapsed time: 0.401638 Linear solver elapsed time: 0.0542017 (13%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 1 f(x)=1.6268e+06 3.32e+06 6.728e-29 36.23 1.11e+04 103.5 1.616e+06 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 2 f(x)= 16896 1.31e+04 0.0009795 185.1 1.598e+04 612.3 115.3 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 3 f(x)= 16856 9.46e+03 0.001043 185.6 1.597e+04 613.8 86.16 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.158157 Total Core solution elapsed time: 2.99377 Linear solver elapsed time: 0.0731312 (2.4%) Total elapsed time: 0 hrs 0 min 3 sec SUCCESS difference: 3.6e-14 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Gradient1 SUCCESS difference: 1.8e-12 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Gradient2 SUCCESS difference: 7.2e-16 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Misfit SUCCESS difference: 3.3e-16 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Rheology SUCCESS difference: 6.6e-16 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: DeepMelt +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3480 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)= 510.7 0.931 510.7 2 f(x)= 469.98 0.00729 470 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0499024 Total Core solution elapsed time: 0.573041 Linear solver elapsed time: 0.0464002 (8.1%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 6.2e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Gradient SUCCESS difference: 2.1e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Misfits SUCCESS difference: 2.7e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: FrictionCoefficient SUCCESS difference: 0 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Pressure1 SUCCESS difference: 1.2e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vel1 SUCCESS difference: 1.8e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vx1 SUCCESS difference: 1.3e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vy1 SUCCESS difference: 1.1e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Pressure2 SUCCESS difference: 1.4e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vel2 SUCCESS difference: 4.8e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vx2 SUCCESS difference: 1.4e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vy2 +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3480 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)= 510.7 0.931 510.7 2 f(x)= 469.98 0.00729 470 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0499024 Total Core solution elapsed time: 0.573041 Linear solver elapsed time: 0.0464002 (8.1%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 6.2e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Gradient SUCCESS difference: 2.1e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Misfits SUCCESS difference: 2.7e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: FrictionCoefficient SUCCESS difference: 0 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Pressure1 SUCCESS difference: 1.2e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vel1 SUCCESS difference: 1.8e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vx1 SUCCESS difference: 1.3e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vy1 SUCCESS difference: 1.1e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Pressure2 SUCCESS difference: 1.4e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vel2 SUCCESS difference: 4.8e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vx2 SUCCESS difference: 1.4e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vy2 +++ exit code: 0 +++ error: 0 ----------MATLAB exited in error!---------- < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 8 (23.2.0.2599560) 64-bit (glnxa64) April 29, 2024 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded ----------------starting:3015----------------------- boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero boundary conditions for stressbalance model: spc set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.723535 Total Core solution elapsed time: 0.554103 Linear solver elapsed time: 0.490634 (89%) Total elapsed time: 0 hrs 0 min 1 sec boundary conditions for stressbalance model: spc set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.044412 Total Core solution elapsed time: 0.0369501 Linear solver elapsed time: 0.0128103 (35%) Total elapsed time: 0 hrs 0 min 0 sec boundary conditions for stressbalance model: spc set as zero model not consistent: NaN values found in field 'autodiff.independents{1}.control_scaling_factor' Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md); Error in test3015 (line 81) md=solve(md,'Masstransport'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3015 test name: SquareShelfConstrainedMasstransp2dAdolcForwardDifference field: N/A ----------------finished:3015----------------------- ----------------starting:3119----------------------- boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: NaN values found in field 'autodiff.independents{1}.control_scaling_factor' Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md); Error in test3119 (line 18) md=solve(md,'Transient'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3119 test name: ReverseScalarDriver field: N/A ----------------finished:3119----------------------- MATLABEXITEDCORRECTLY < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 8 (23.2.0.2599560) 64-bit (glnxa64) April 29, 2024 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded ----------------starting:3201----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.826187 Total Core solution elapsed time: 1.05662 Linear solver elapsed time: 0.780568 (74%) Total elapsed time: 0 hrs 0 min 1 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)= 26716 1.83e+04 1.104e-26 2.893e-26 6.644e-25 3.122e-24 178.5 885 2.54e+04 248.5 2 f(x)= 10514 2.17e+04 37.78 98.63 2166 67.41 61.31 253.7 7473 355.7 3 f(x)= 5480.1 8.46e+03 2.609 7.986 65.69 4.452 108.5 629.4 4520 141.5 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.144854 Total Core solution elapsed time: 0.422344 Linear solver elapsed time: 0.0198571 (4.7%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 2.3e-14 < 1e-12 test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: Gradient SUCCESS difference: 2.1e-14 < 1e-12 test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: Misfit SUCCESS difference: 3.6e-15 < 1e-12 test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: Rheology ----------------finished:3201----------------------- ----------------starting:3202----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0301859 Total Core solution elapsed time: 0.0843355 Linear solver elapsed time: 0.0316627 (38%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)= 22111 1.93e+04 4.98e-29 6.618e-29 1.055e-28 6.827e-25 143 656.2 2.114e+04 168.7 2 f(x)= 6555.5 1.69e+04 34.09 100.4 1843 61.21 30.67 152.7 4146 187 3 f(x)= 2512.1 6.36e+03 2.458 8.109 36.32 3.865 72.45 397.1 1919 72.41 4 f(x)= 1361.2 2.52e+03 3.688 12.3 31.33 5.808 52.61 303.7 892.5 59.2 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0765118 Total Core solution elapsed time: 0.524454 Linear solver elapsed time: 0.0177172 (3.4%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 7.8e-14 < 2e-12 test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: Gradient SUCCESS difference: 1.6e-14 < 1e-12 test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: Misfit SUCCESS difference: 2.1e-15 < 1e-12 test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: Rheology ----------------finished:3202----------------------- ----------------starting:3203----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0327816 Total Core solution elapsed time: 0.530121 Linear solver elapsed time: 0.123371 (23%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)=2.2088e+23 4.18e+15 6.229e+22 7.4e+22 8.458e+22 2 f(x)=2.2088e+23 0 6.229e+22 7.4e+22 8.458e+22 3 f(x)=2.2088e+23 0 6.229e+22 7.4e+22 8.458e+22 4 f(x)=2.2088e+23 0 6.229e+22 7.4e+22 8.458e+22 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.101732 Total Core solution elapsed time: 3.05769 Linear solver elapsed time: 0.112689 (3.7%) Total elapsed time: 0 hrs 0 min 3 sec SUCCESS difference: 0 < 1e-12 test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: Gradient SUCCESS difference: 2.1e-15 < 1e-12 test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: Misfit SUCCESS difference: 0 < 1e-12 test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: Rheology ----------------finished:3203----------------------- ----------------starting:3204----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0229524 Total Core solution elapsed time: 0.0660896 Linear solver elapsed time: 0.0230243 (35%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 1 f(x)= 26716 1.83e+04 7.072e-29 1.054e-28 2.928e-28 1.443e-24 178.5 885 2.54e+04 248.5 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 2 f(x)= 10514 2.17e+04 37.78 98.63 2166 67.41 61.31 253.7 7473 355.7 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 3 f(x)= 5480.1 8.46e+03 2.609 7.986 65.69 4.452 108.5 629.4 4520 141.5 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0822452 Total Core solution elapsed time: 0.816206 Linear solver elapsed time: 0.0227751 (2.8%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 4.3e-14 < 1e-12 test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: Gradient SUCCESS difference: 3.1e-14 < 1e-12 test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: Misfit SUCCESS difference: 4.4e-15 < 1e-12 test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: Rheology ----------------finished:3204----------------------- ----------------starting:3205----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0216487 Total Core solution elapsed time: 0.0731776 Linear solver elapsed time: 0.0267157 (37%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 1 f(x)= 22111 1.93e+04 5.403e-27 1.646e-26 4.881e-25 4.548e-24 143 656.2 2.114e+04 168.7 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 2 f(x)= 6555.5 1.69e+04 34.09 100.4 1843 61.21 30.67 152.7 4146 187 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 3 f(x)= 2512.1 6.36e+03 2.458 8.109 36.32 3.865 72.45 397.1 1919 72.41 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 4 f(x)= 1361.2 2.52e+03 3.688 12.3 31.33 5.808 52.61 303.7 892.5 59.2 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0916455 Total Core solution elapsed time: 1.07436 Linear solver elapsed time: 0.0244396 (2.3%) Total elapsed time: 0 hrs 0 min 1 sec SUCCESS difference: 2.1e-13 < 1e-12 test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: Gradient SUCCESS difference: 1.9e-14 < 1e-12 test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: Misfit SUCCESS difference: 6.8e-15 < 1e-12 test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: Rheology ----------------finished:3205----------------------- ----------------starting:3206----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: write lock file: FemModel initialization elapsed time: 0.0271377 Total Core solution elapsed time: 0.401638 Linear solver elapsed time: 0.0542017 (13%) Total elapsed time: 0 hrs 0 min 0 sec INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 1 f(x)=1.6268e+06 3.32e+06 6.728e-29 36.23 1.11e+04 103.5 1.616e+06 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 2 f(x)= 16896 1.31e+04 0.0009795 185.1 1.598e+04 612.3 115.3 == restarting from AD_step_2_rank_0.ckpt == restarting from AD_step_1_rank_0.ckpt 3 f(x)= 16856 9.46e+03 0.001043 185.6 1.597e+04 613.8 86.16 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.158157 Total Core solution elapsed time: 2.99377 Linear solver elapsed time: 0.0731312 (2.4%) Total elapsed time: 0 hrs 0 min 3 sec SUCCESS difference: 3.6e-14 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Gradient1 SUCCESS difference: 1.8e-12 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Gradient2 SUCCESS difference: 7.2e-16 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Misfit SUCCESS difference: 3.3e-16 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: Rheology SUCCESS difference: 6.6e-16 < 1e-10 test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: DeepMelt ----------------finished:3206----------------------- ----------------starting:3480----------------------- boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero INFO: the outlog will look better if only md.verbose.control is turned on uploading input files launching solution sequence Ice-sheet and Sea-level System Model (ISSM) version 2026.1 GitHub: https://github.com/ISSMteam/ISSM/ Documentation: https://issmteam.github.io/ISSM-Documentation/ call computational core: Iter Cost function Grad. norm List of contributions 1 f(x)= 510.7 0.931 510.7 2 f(x)= 469.98 0.00729 470 Exit code 5: Maximum number of function calls exceeded write lock file: FemModel initialization elapsed time: 0.0499024 Total Core solution elapsed time: 0.573041 Linear solver elapsed time: 0.0464002 (8.1%) Total elapsed time: 0 hrs 0 min 0 sec SUCCESS difference: 6.2e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Gradient SUCCESS difference: 2.1e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Misfits SUCCESS difference: 2.7e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: FrictionCoefficient SUCCESS difference: 0 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Pressure1 SUCCESS difference: 1.2e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vel1 SUCCESS difference: 1.8e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vx1 SUCCESS difference: 1.3e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vy1 SUCCESS difference: 1.1e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Pressure2 SUCCESS difference: 1.4e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vel2 SUCCESS difference: 4.8e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vx2 SUCCESS difference: 1.4e-15 < 1e-11 test id: 3480 test name: SquareShelfAdolcStaticControls field: Vy2 ----------------finished:3480----------------------- MATLABEXITEDCORRECTLY -----------End of matlab_log.log----------- Build step 'Execute shell' marked build as failure Recording test results Finished: FAILURE