Started by GitHub push by TidbitSoftware
Running as SYSTEM
Building remotely on <a href='/jenkins/computer/Debian_12-VM/' class='jenkins-table__link model-link model-link--float'>Debian_12-VM</a> (debian linux) in workspace /home/jenkins/workspace/Debian_Linux-Ice-Ocean
The recommended git tool is: NONE
 &gt; git rev-parse --resolve-git-dir /home/jenkins/workspace/Debian_Linux-Ice-Ocean/.git # timeout=10
Fetching changes from the remote Git repository
 &gt; git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10
Fetching upstream changes from git@github.com:ISSMteam/ISSM.git
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.39.5'
using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins
Verifying host key using known hosts file
 &gt; git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 &gt; git rev-parse refs/remotes/origin/main^{commit} # timeout=10
Checking out Revision 1ead90845164b3607618f250d0dfb72f5b4a3628 (refs/remotes/origin/main)
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f 1ead90845164b3607618f250d0dfb72f5b4a3628 # timeout=10
Commit message: "Use system/developer copy of libblas/lapack on macOS"
 &gt; git rev-list --no-walk a9631cdc27544ebede68754b0bddb5ad37b28706 # timeout=10
[Debian_Linux-Ice-Ocean] $ /bin/bash /tmp/jenkins4922951793107459702.sh
Cleaning up execution directory
======================================================
             Determining installation type            
======================================================
   
List of changed files
---------------------
etc/environment.sh
externalpackages/petsc/install-3.23-linux.sh
externalpackages/petsc/install-3.23-mac.sh
   
-- checking for changed externalpackages... yes
-- checking for reconfiguration... yes
-- checking for recompilation... yes
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/etc/environment.sh: line 329: syntax error in conditional expression
======================================================
       Skipping autotools                          
======================================================
======================================================
       Skipping cmake                          
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======================================================
       Skipping petsc                          
======================================================
======================================================
       Skipping triangle                          
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======================================================
       Skipping m1qn3                          
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       Skipping semic                          
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       Skipping shell2junit                          
======================================================
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/etc/environment.sh: line 14: syntax error near unexpected token `-n'
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/etc/environment.sh: line 14: `if [[ -n "$ZSH_VERSION" ]]; then'
======================================================
             Cleaning up and reconfiguring            
======================================================
Making uninstall in src
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
Making uninstall in c
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
 ( cd '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin' &amp;&amp; rm -f issm.exe issm_slc.exe issm_ocean.exe kriging.exe )
 /bin/bash ../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so
 /bin/bash ../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so
 /bin/bash ../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
Making uninstall in m
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
Making uninstall in wrappers
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
Making uninstall in matlab
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi_matlab.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi_matlab.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi_matlab.so
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGrid.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGrid.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGrid.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGrid.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGrid.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64
 /bin/bash ../../../libtool   --mode=uninstall rm -f '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.la'
libtool: uninstall: rm -f /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.la /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[3]: Nothing to be done for 'uninstall-am'.
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[2]: Nothing to be done for 'uninstall-am'.
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
make[1]: Nothing to be done for 'uninstall-am'.
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
Making distclean in src
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
Making distclean in c
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
 rm -f issm.exe issm_slc.exe issm_ocean.exe kriging.exe
 rm -f issm issm_slc issm_ocean kriging
test -z "libISSMCore.la libISSMOverload.la libISSMModules.la" || rm -f libISSMCore.la libISSMOverload.la libISSMModules.la
rm -f ./so_locations
rm -rf .libs _libs
rm -rf ./analyses/.libs ./analyses/_libs
rm -rf ./bamg/.libs ./bamg/_libs
rm -rf ./classes/.libs ./classes/_libs
rm -rf ./classes/Constraints/.libs ./classes/Constraints/_libs
rm -rf ./classes/Dakota/.libs ./classes/Dakota/_libs
rm -rf ./classes/Elements/.libs ./classes/Elements/_libs
rm -rf ./classes/ExternalResults/.libs ./classes/ExternalResults/_libs
rm -rf ./classes/Inputs/.libs ./classes/Inputs/_libs
rm -rf ./classes/Loads/.libs ./classes/Loads/_libs
rm -rf ./classes/Materials/.libs ./classes/Materials/_libs
rm -rf ./classes/Options/.libs ./classes/Options/_libs
rm -rf ./classes/Params/.libs ./classes/Params/_libs
rm -rf ./classes/gauss/.libs ./classes/gauss/_libs
rm -rf ./classes/kriging/.libs ./classes/kriging/_libs
rm -rf ./classes/matrix/.libs ./classes/matrix/_libs
rm -rf ./cores/.libs ./cores/_libs
rm -rf ./datastructures/.libs ./datastructures/_libs
rm -rf ./main/.libs ./main/_libs
rm -rf ./modules/AllocateSystemMatricesx/.libs ./modules/AllocateSystemMatricesx/_libs
rm -rf ./modules/AverageOntoPartitionx/.libs ./modules/AverageOntoPartitionx/_libs
rm -rf ./modules/BamgConvertMeshx/.libs ./modules/BamgConvertMeshx/_libs
rm -rf ./modules/BamgTriangulatex/.libs ./modules/BamgTriangulatex/_libs
rm -rf ./modules/Bamgx/.libs ./modules/Bamgx/_libs
rm -rf ./modules/Calvingx/.libs ./modules/Calvingx/_libs
rm -rf ./modules/Chacox/.libs ./modules/Chacox/_libs
rm -rf ./modules/ConfigureObjectsx/.libs ./modules/ConfigureObjectsx/_libs
rm -rf ./modules/ConstraintsStatex/.libs ./modules/ConstraintsStatex/_libs
rm -rf ./modules/ContourToMeshx/.libs ./modules/ContourToMeshx/_libs
rm -rf ./modules/ContourToNodesx/.libs ./modules/ContourToNodesx/_libs
rm -rf ./modules/ControlInputSetGradientx/.libs ./modules/ControlInputSetGradientx/_libs
rm -rf ./modules/CoordinateSystemTransformx/.libs ./modules/CoordinateSystemTransformx/_libs
rm -rf ./modules/CreateJacobianMatrixx/.libs ./modules/CreateJacobianMatrixx/_libs
rm -rf ./modules/CreateNodalConstraintsx/.libs ./modules/CreateNodalConstraintsx/_libs
rm -rf ./modules/Damagex/.libs ./modules/Damagex/_libs
rm -rf ./modules/DistanceToMaskBoundaryx/.libs ./modules/DistanceToMaskBoundaryx/_libs
rm -rf ./modules/DragCoefficientAbsGradientx/.libs ./modules/DragCoefficientAbsGradientx/_libs
rm -rf ./modules/ElementConnectivityx/.libs ./modules/ElementConnectivityx/_libs
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rm -rf ./modules/GiaDeflectionCorex/.libs ./modules/GiaDeflectionCorex/_libs
rm -rf ./modules/Gradjx/.libs ./modules/Gradjx/_libs
rm -rf ./modules/GroundinglineMigrationx/.libs ./modules/GroundinglineMigrationx/_libs
rm -rf ./modules/InputDepthAverageAtBasex/.libs ./modules/InputDepthAverageAtBasex/_libs
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rm -rf ./modules/InputExtrudex/.libs ./modules/InputExtrudex/_libs
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rm -rf ./modules/Krigingx/.libs ./modules/Krigingx/_libs
rm -rf ./modules/Mergesolutionfromftogx/.libs ./modules/Mergesolutionfromftogx/_libs
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rm -rf ./modules/MeshProfileIntersectionx/.libs ./modules/MeshProfileIntersectionx/_libs
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rm -rf ./modules/MmeToInputx/.libs ./modules/MmeToInputx/_libs
rm -rf ./modules/ModelProcessorx/.libs ./modules/ModelProcessorx/_libs
rm -rf ./modules/ModelProcessorx/Autodiff/.libs ./modules/ModelProcessorx/Autodiff/_libs
rm -rf ./modules/ModelProcessorx/Control/.libs ./modules/ModelProcessorx/Control/_libs
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rm -rf ./modules/ModelProcessorx/Transient/.libs ./modules/ModelProcessorx/Transient/_libs
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rm -rf ./modules/NodesDofx/.libs ./modules/NodesDofx/_libs
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rm -rf ./modules/OutputDefinitionsResponsex/.libs ./modules/OutputDefinitionsResponsex/_libs
rm -rf ./modules/OutputResultsx/.libs ./modules/OutputResultsx/_libs
rm -rf ./modules/ParseToolkitsOptionsx/.libs ./modules/ParseToolkitsOptionsx/_libs
rm -rf ./modules/PointCloudFindNeighborsx/.libs ./modules/PointCloudFindNeighborsx/_libs
rm -rf ./modules/ProcessRiftsx/.libs ./modules/ProcessRiftsx/_libs
rm -rf ./modules/PropagateFlagsFromConnectivityx/.libs ./modules/PropagateFlagsFromConnectivityx/_libs
rm -rf ./modules/QmuStatisticsx/.libs ./modules/QmuStatisticsx/_libs
rm -rf ./modules/Reduceloadx/.libs ./modules/Reduceloadx/_libs
rm -rf ./modules/Reducevectorgtofx/.libs ./modules/Reducevectorgtofx/_libs
rm -rf ./modules/ResetConstraintsx/.libs ./modules/ResetConstraintsx/_libs
rm -rf ./modules/ResetFSBasalBoundaryConditionx/.libs ./modules/ResetFSBasalBoundaryConditionx/_libs
rm -rf ./modules/RheologyBAbsGradientx/.libs ./modules/RheologyBAbsGradientx/_libs
rm -rf ./modules/RheologyBbarAbsGradientx/.libs ./modules/RheologyBbarAbsGradientx/_libs
rm -rf ./modules/Scotchx/.libs ./modules/Scotchx/_libs
rm -rf ./modules/SetActiveNodesLSMx/.libs ./modules/SetActiveNodesLSMx/_libs
rm -rf ./modules/SetControlInputsFromVectorx/.libs ./modules/SetControlInputsFromVectorx/_libs
rm -rf ./modules/Solverx/.libs ./modules/Solverx/_libs
rm -rf ./modules/SpcNodesx/.libs ./modules/SpcNodesx/_libs
rm -rf ./modules/StochasticForcingx/.libs ./modules/StochasticForcingx/_libs
rm -rf ./modules/SurfaceAbsVelMisfitx/.libs ./modules/SurfaceAbsVelMisfitx/_libs
rm -rf ./modules/SurfaceAreax/.libs ./modules/SurfaceAreax/_libs
rm -rf ./modules/SurfaceAverageVelMisfitx/.libs ./modules/SurfaceAverageVelMisfitx/_libs
rm -rf ./modules/SurfaceLogVelMisfitx/.libs ./modules/SurfaceLogVelMisfitx/_libs
rm -rf ./modules/SurfaceLogVxVyMisfitx/.libs ./modules/SurfaceLogVxVyMisfitx/_libs
rm -rf ./modules/SurfaceMassBalancex/.libs ./modules/SurfaceMassBalancex/_libs
rm -rf ./modules/SurfaceRelVelMisfitx/.libs ./modules/SurfaceRelVelMisfitx/_libs
rm -rf ./modules/SystemMatricesx/.libs ./modules/SystemMatricesx/_libs
rm -rf ./modules/ThicknessAbsMisfitx/.libs ./modules/ThicknessAbsMisfitx/_libs
rm -rf ./modules/ThicknessAcrossGradientx/.libs ./modules/ThicknessAcrossGradientx/_libs
rm -rf ./modules/ThicknessAlongGradientx/.libs ./modules/ThicknessAlongGradientx/_libs
rm -rf ./modules/Trianglex/.libs ./modules/Trianglex/_libs
rm -rf ./modules/UpdateDynamicConstraintsx/.libs ./modules/UpdateDynamicConstraintsx/_libs
rm -rf ./modules/UpdateMmesx/.libs ./modules/UpdateMmesx/_libs
rm -rf ./modules/VertexCoordinatesx/.libs ./modules/VertexCoordinatesx/_libs
rm -rf ./modules/Zgesvx/.libs ./modules/Zgesvx/_libs
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rm -rf ./shared/Enum/.libs ./shared/Enum/_libs
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rm -rf ./shared/Exp/.libs ./shared/Exp/_libs
rm -rf ./shared/FSanalyticals/.libs ./shared/FSanalyticals/_libs
rm -rf ./shared/LatLong/.libs ./shared/LatLong/_libs
rm -rf ./shared/Matrix/.libs ./shared/Matrix/_libs
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rm -rf ./shared/Numerics/.libs ./shared/Numerics/_libs
rm -rf ./shared/Random/.libs ./shared/Random/_libs
rm -rf ./shared/Sorting/.libs ./shared/Sorting/_libs
rm -rf ./shared/String/.libs ./shared/String/_libs
rm -rf ./shared/Threads/.libs ./shared/Threads/_libs
rm -rf ./shared/Triangle/.libs ./shared/Triangle/_libs
rm -rf ./shared/io/Comm/.libs ./shared/io/Comm/_libs
rm -rf ./shared/io/Disk/.libs ./shared/io/Disk/_libs
rm -rf ./shared/io/Marshalling/.libs ./shared/io/Marshalling/_libs
rm -rf ./shared/io/Print/.libs ./shared/io/Print/_libs
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rm -f ./toolkits/petsc/objects/.deps/libISSMCore_la-PetscSolver.Plo
rm -f ./toolkits/petsc/objects/.deps/libISSMCore_la-PetscVec.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-ISSMToPetscInsertMode.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-ISSMToPetscMatrixType.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-ISSMToPetscNormMode.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-KSPFree.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-MatFree.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-MatToMPISerial.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-NewMat.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-NewVec.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-PetscOptionsDetermineSolverType.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-VecFree.Plo
rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-VecToMPISerial.Plo
rm -f main/.deps/issm-issm.Po
rm -f main/.deps/issm_dakota-issm_dakota.Po
rm -f main/.deps/issm_ocean-issm_ocean.Po
rm -f main/.deps/issm_post-issm_post.Po
rm -f main/.deps/issm_slc-issm_slc.Po
rm -f main/.deps/kriging-kriging.Po
rm -f Makefile
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
Making distclean in m
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
rm -rf .libs _libs
rm -f *.lo
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f Makefile
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
Making distclean in wrappers
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
Making distclean in matlab
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
test -z "libISSMMatlab.la libISSMApi_matlab.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromGrid.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la  Kriging_matlab.la  " || rm -f libISSMMatlab.la libISSMApi_matlab.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromGrid.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la  Kriging_matlab.la  
rm -f ./so_locations
rm -rf .libs _libs
rm -rf ../BamgConvertMesh/.libs ../BamgConvertMesh/_libs
rm -rf ../BamgMesher/.libs ../BamgMesher/_libs
rm -rf ../BamgTriangulate/.libs ../BamgTriangulate/_libs
rm -rf ../Chaco/.libs ../Chaco/_libs
rm -rf ../ContourToMesh/.libs ../ContourToMesh/_libs
rm -rf ../ContourToNodes/.libs ../ContourToNodes/_libs
rm -rf ../CoordTransform/.libs ../CoordTransform/_libs
rm -rf ../DistanceToMaskBoundary/.libs ../DistanceToMaskBoundary/_libs
rm -rf ../ElementConnectivity/.libs ../ElementConnectivity/_libs
rm -rf ../ExpSimplify/.libs ../ExpSimplify/_libs
rm -rf ../ExpToLevelSet/.libs ../ExpToLevelSet/_libs
rm -rf ../InterpFromGrid/.libs ../InterpFromGrid/_libs
rm -rf ../InterpFromGridToMesh/.libs ../InterpFromGridToMesh/_libs
rm -rf ../InterpFromMesh2d/.libs ../InterpFromMesh2d/_libs
rm -rf ../InterpFromMeshToGrid/.libs ../InterpFromMeshToGrid/_libs
rm -rf ../InterpFromMeshToMesh2d/.libs ../InterpFromMeshToMesh2d/_libs
rm -rf ../InterpFromMeshToMesh3d/.libs ../InterpFromMeshToMesh3d/_libs
rm -rf ../IssmConfig/.libs ../IssmConfig/_libs
rm -rf ../Kriging/.libs ../Kriging/_libs
rm -rf ../MeshPartition/.libs ../MeshPartition/_libs
rm -rf ../MeshProfileIntersection/.libs ../MeshProfileIntersection/_libs
rm -rf ../NodeConnectivity/.libs ../NodeConnectivity/_libs
rm -rf ../PointCloudFindNeighbors/.libs ../PointCloudFindNeighbors/_libs
rm -rf ../ProcessRifts/.libs ../ProcessRifts/_libs
rm -rf ../PropagateFlagsFromConnectivity/.libs ../PropagateFlagsFromConnectivity/_libs
rm -rf ../Scotch/.libs ../Scotch/_libs
rm -rf ../ShpRead/.libs ../ShpRead/_libs
rm -rf ../Triangle/.libs ../Triangle/_libs
rm -rf ./io/.libs ./io/_libs
rm -f *.o
rm -f ../BamgConvertMesh/*.o
rm -f ../BamgConvertMesh/*.lo
rm -f ../BamgMesher/*.o
rm -f ../BamgMesher/*.lo
rm -f ../BamgTriangulate/*.o
rm -f ../BamgTriangulate/*.lo
rm -f ../Chaco/*.o
rm -f ../Chaco/*.lo
rm -f ../ContourToMesh/*.o
rm -f ../ContourToMesh/*.lo
rm -f ../ContourToNodes/*.o
rm -f ../ContourToNodes/*.lo
rm -f ../CoordTransform/*.o
rm -f ../CoordTransform/*.lo
rm -f ../DistanceToMaskBoundary/*.o
rm -f ../DistanceToMaskBoundary/*.lo
rm -f ../ElementConnectivity/*.o
rm -f ../ElementConnectivity/*.lo
rm -f ../ExpSimplify/*.o
rm -f ../ExpSimplify/*.lo
rm -f ../ExpToLevelSet/*.o
rm -f ../ExpToLevelSet/*.lo
rm -f ../InterpFromGrid/*.o
rm -f ../InterpFromGrid/*.lo
rm -f ../InterpFromGridToMesh/*.o
rm -f ../InterpFromGridToMesh/*.lo
rm -f ../InterpFromMesh2d/*.o
rm -f ../InterpFromMesh2d/*.lo
rm -f ../InterpFromMeshToGrid/*.o
rm -f ../InterpFromMeshToGrid/*.lo
rm -f ../InterpFromMeshToMesh2d/*.o
rm -f ../InterpFromMeshToMesh2d/*.lo
rm -f ../InterpFromMeshToMesh3d/*.o
rm -f ../InterpFromMeshToMesh3d/*.lo
rm -f ../IssmConfig/*.o
rm -f ../IssmConfig/*.lo
rm -f ../Kriging/*.o
rm -f ../Kriging/*.lo
rm -f ../MeshPartition/*.o
rm -f ../MeshPartition/*.lo
rm -f ../MeshProfileIntersection/*.o
rm -f ../MeshProfileIntersection/*.lo
rm -f ../NodeConnectivity/*.o
rm -f ../NodeConnectivity/*.lo
rm -f ../PointCloudFindNeighbors/*.o
rm -f ../PointCloudFindNeighbors/*.lo
rm -f ../ProcessRifts/*.o
rm -f ../ProcessRifts/*.lo
rm -f ../PropagateFlagsFromConnectivity/*.o
rm -f ../PropagateFlagsFromConnectivity/*.lo
rm -f ../Scotch/*.o
rm -f ../Scotch/*.lo
rm -f ../ShpRead/*.o
rm -f ../ShpRead/*.lo
rm -f ../Triangle/*.o
rm -f ../Triangle/*.lo
rm -f ./io/*.o
rm -f ./io/*.lo
rm -f *.lo
rm -f *.tab.c
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f ../BamgConvertMesh/.deps/.dirstamp
rm -f ../BamgConvertMesh/.dirstamp
rm -f ../BamgMesher/.deps/.dirstamp
rm -f ../BamgMesher/.dirstamp
rm -f ../BamgTriangulate/.deps/.dirstamp
rm -f ../BamgTriangulate/.dirstamp
rm -f ../Chaco/.deps/.dirstamp
rm -f ../Chaco/.dirstamp
rm -f ../ContourToMesh/.deps/.dirstamp
rm -f ../ContourToMesh/.dirstamp
rm -f ../ContourToNodes/.deps/.dirstamp
rm -f ../ContourToNodes/.dirstamp
rm -f ../CoordTransform/.deps/.dirstamp
rm -f ../CoordTransform/.dirstamp
rm -f ../DistanceToMaskBoundary/.deps/.dirstamp
rm -f ../DistanceToMaskBoundary/.dirstamp
rm -f ../ElementConnectivity/.deps/.dirstamp
rm -f ../ElementConnectivity/.dirstamp
rm -f ../ExpSimplify/.deps/.dirstamp
rm -f ../ExpSimplify/.dirstamp
rm -f ../ExpToLevelSet/.deps/.dirstamp
rm -f ../ExpToLevelSet/.dirstamp
rm -f ../InterpFromGrid/.deps/.dirstamp
rm -f ../InterpFromGrid/.dirstamp
rm -f ../InterpFromGridToMesh/.deps/.dirstamp
rm -f ../InterpFromGridToMesh/.dirstamp
rm -f ../InterpFromMesh2d/.deps/.dirstamp
rm -f ../InterpFromMesh2d/.dirstamp
rm -f ../InterpFromMeshToGrid/.deps/.dirstamp
rm -f ../InterpFromMeshToGrid/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.dirstamp
rm -f ../InterpFromMeshToMesh3d/.deps/.dirstamp
rm -f ../InterpFromMeshToMesh3d/.dirstamp
rm -f ../IssmConfig/.deps/.dirstamp
rm -f ../IssmConfig/.dirstamp
rm -f ../Kriging/.deps/.dirstamp
rm -f ../Kriging/.dirstamp
rm -f ../MeshPartition/.deps/.dirstamp
rm -f ../MeshPartition/.dirstamp
rm -f ../MeshProfileIntersection/.deps/.dirstamp
rm -f ../MeshProfileIntersection/.dirstamp
rm -f ../NodeConnectivity/.deps/.dirstamp
rm -f ../NodeConnectivity/.dirstamp
rm -f ../PointCloudFindNeighbors/.deps/.dirstamp
rm -f ../PointCloudFindNeighbors/.dirstamp
rm -f ../ProcessRifts/.deps/.dirstamp
rm -f ../ProcessRifts/.dirstamp
rm -f ../PropagateFlagsFromConnectivity/.deps/.dirstamp
rm -f ../PropagateFlagsFromConnectivity/.dirstamp
rm -f ../Scotch/.deps/.dirstamp
rm -f ../Scotch/.dirstamp
rm -f ../ShpRead/.deps/.dirstamp
rm -f ../ShpRead/.dirstamp
rm -f ../Triangle/.deps/.dirstamp
rm -f ../Triangle/.dirstamp
rm -f io/.deps/.dirstamp
rm -f io/.dirstamp
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
rm -f ../BamgConvertMesh/.deps/BamgConvertMesh_matlab_la-BamgConvertMesh.Plo
rm -f ../BamgMesher/.deps/BamgMesher_matlab_la-BamgMesher.Plo
rm -f ../BamgTriangulate/.deps/BamgTriangulate_matlab_la-BamgTriangulate.Plo
rm -f ../Chaco/.deps/Chaco_matlab_la-Chaco.Plo
rm -f ../ContourToMesh/.deps/ContourToMesh_matlab_la-ContourToMesh.Plo
rm -f ../ContourToNodes/.deps/ContourToNodes_matlab_la-ContourToNodes.Plo
rm -f ../CoordTransform/.deps/CoordTransform_matlab_la-CoordTransform.Plo
rm -f ../DistanceToMaskBoundary/.deps/DistanceToMaskBoundary_matlab_la-DistanceToMaskBoundary.Plo
rm -f ../ElementConnectivity/.deps/ElementConnectivity_matlab_la-ElementConnectivity.Plo
rm -f ../ExpSimplify/.deps/ExpSimplify_matlab_la-ExpSimplify.Plo
rm -f ../ExpToLevelSet/.deps/ExpToLevelSet_matlab_la-ExpToLevelSet.Plo
rm -f ../InterpFromGrid/.deps/InterpFromGrid_la-InterpFromGrid.Plo
rm -f ../InterpFromGridToMesh/.deps/InterpFromGridToMesh_matlab_la-InterpFromGridToMesh.Plo
rm -f ../InterpFromMesh2d/.deps/InterpFromMesh2d_matlab_la-InterpFromMesh2d.Plo
rm -f ../InterpFromMeshToGrid/.deps/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.Plo
rm -f ../InterpFromMeshToMesh2d/.deps/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.Plo
rm -f ../InterpFromMeshToMesh3d/.deps/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.Plo
rm -f ../IssmConfig/.deps/IssmConfig_matlab_la-IssmConfig.Plo
rm -f ../Kriging/.deps/Kriging_matlab_la-Kriging.Plo
rm -f ../MeshPartition/.deps/MeshPartition_matlab_la-MeshPartition.Plo
rm -f ../MeshProfileIntersection/.deps/MeshProfileIntersection_matlab_la-MeshProfileIntersection.Plo
rm -f ../NodeConnectivity/.deps/NodeConnectivity_matlab_la-NodeConnectivity.Plo
rm -f ../PointCloudFindNeighbors/.deps/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.Plo
rm -f ../ProcessRifts/.deps/ProcessRifts_matlab_la-ProcessRifts.Plo
rm -f ../PropagateFlagsFromConnectivity/.deps/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.Plo
rm -f ../Scotch/.deps/Scotch_matlab_la-Scotch.Plo
rm -f ../ShpRead/.deps/ShpRead_matlab_la-ShpRead.Plo
rm -f ../Triangle/.deps/Triangle_matlab_la-Triangle.Plo
rm -f ./io/.deps/libISSMApi_matlab_la-ApiPrintf.Plo
rm -f ./io/.deps/libISSMMatlab_la-CheckNumMatlabArguments.Plo
rm -f ./io/.deps/libISSMMatlab_la-FetchMatlabData.Plo
rm -f ./io/.deps/libISSMMatlab_la-WriteMatlabData.Plo
rm -f Makefile
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
Making distclean in javascript
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/javascript'
 rm -f IssmModule.js
 rm -f IssmModule
test -z "libISSMJavascript.la libISSMApi_javascript.la" || rm -f libISSMJavascript.la libISSMApi_javascript.la
rm -f ./so_locations
rm -rf .libs _libs
rm -rf ./io/.libs ./io/_libs
rm -f *.o
rm -f ../BamgMesher/*.o
rm -f ../ContourToMesh/*.o
rm -f ../ElementConnectivity/*.o
rm -f ../InterpFromGridToMesh/*.o
rm -f ../InterpFromMeshToMesh2d/*.o
rm -f ../Issm/*.o
rm -f ../IssmConfig/*.o
rm -f ../NodeConnectivity/*.o
rm -f ../Triangle/*.o
rm -f ./io/*.o
rm -f ./io/*.lo
rm -f *.lo
rm -f *.tab.c
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f ../BamgMesher/.deps/.dirstamp
rm -f ../BamgMesher/.dirstamp
rm -f ../ContourToMesh/.deps/.dirstamp
rm -f ../ContourToMesh/.dirstamp
rm -f ../ElementConnectivity/.deps/.dirstamp
rm -f ../ElementConnectivity/.dirstamp
rm -f ../InterpFromGridToMesh/.deps/.dirstamp
rm -f ../InterpFromGridToMesh/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.dirstamp
rm -f ../Issm/.deps/.dirstamp
rm -f ../Issm/.dirstamp
rm -f ../IssmConfig/.deps/.dirstamp
rm -f ../IssmConfig/.dirstamp
rm -f ../NodeConnectivity/.deps/.dirstamp
rm -f ../NodeConnectivity/.dirstamp
rm -f ../Triangle/.deps/.dirstamp
rm -f ../Triangle/.dirstamp
rm -f io/.deps/.dirstamp
rm -f io/.dirstamp
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
rm -f ../BamgMesher/.deps/IssmModule-BamgMesher.Po
rm -f ../ContourToMesh/.deps/IssmModule-ContourToMesh.Po
rm -f ../ElementConnectivity/.deps/IssmModule-ElementConnectivity.Po
rm -f ../InterpFromGridToMesh/.deps/IssmModule-InterpFromGridToMesh.Po
rm -f ../InterpFromMeshToMesh2d/.deps/IssmModule-InterpFromMeshToMesh2d.Po
rm -f ../Issm/.deps/IssmModule-issm.Po
rm -f ../IssmConfig/.deps/IssmModule-IssmConfig.Po
rm -f ../NodeConnectivity/.deps/IssmModule-NodeConnectivity.Po
rm -f ../Triangle/.deps/IssmModule-Triangle.Po
rm -f ./io/.deps/libISSMApi_javascript_la-ApiPrintf.Plo
rm -f ./io/.deps/libISSMJavascript_la-FetchJavascriptData.Plo
rm -f ./io/.deps/libISSMJavascript_la-WriteJavascriptData.Plo
rm -f Makefile
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/javascript'
Making distclean in python
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/python'
test -z "libISSMPython.la libISSMApi_python.la BamgConvertMesh_python.la BamgMesher_python.la BamgTriangulate_python.la ContourToMesh_python.la ContourToNodes_python.la ElementConnectivity_python.la ExpToLevelSet_python.la InterpFromGridToMesh_python.la InterpFromMesh2d_python.la InterpFromMeshToGrid_python.la InterpFromMeshToMesh2d_python.la InterpFromMeshToMesh3d_python.la IssmConfig_python.la MeshPartition_python.la MeshProfileIntersection_python.la NodeConnectivity_python.la Triangle_python.la ProcessRifts_python.la " || rm -f libISSMPython.la libISSMApi_python.la BamgConvertMesh_python.la BamgMesher_python.la BamgTriangulate_python.la ContourToMesh_python.la ContourToNodes_python.la ElementConnectivity_python.la ExpToLevelSet_python.la InterpFromGridToMesh_python.la InterpFromMesh2d_python.la InterpFromMeshToGrid_python.la InterpFromMeshToMesh2d_python.la InterpFromMeshToMesh3d_python.la IssmConfig_python.la MeshPartition_python.la MeshProfileIntersection_python.la NodeConnectivity_python.la Triangle_python.la ProcessRifts_python.la 
rm -f ./so_locations
rm -rf .libs _libs
rm -rf ../BamgConvertMesh/.libs ../BamgConvertMesh/_libs
rm -rf ../BamgMesher/.libs ../BamgMesher/_libs
rm -rf ../BamgTriangulate/.libs ../BamgTriangulate/_libs
rm -rf ../Chaco/.libs ../Chaco/_libs
rm -rf ../ContourToMesh/.libs ../ContourToMesh/_libs
rm -rf ../ContourToNodes/.libs ../ContourToNodes/_libs
rm -rf ../ElementConnectivity/.libs ../ElementConnectivity/_libs
rm -rf ../ExpToLevelSet/.libs ../ExpToLevelSet/_libs
rm -rf ../InterpFromGridToMesh/.libs ../InterpFromGridToMesh/_libs
rm -rf ../InterpFromMesh2d/.libs ../InterpFromMesh2d/_libs
rm -rf ../InterpFromMeshToGrid/.libs ../InterpFromMeshToGrid/_libs
rm -rf ../InterpFromMeshToMesh2d/.libs ../InterpFromMeshToMesh2d/_libs
rm -rf ../InterpFromMeshToMesh3d/.libs ../InterpFromMeshToMesh3d/_libs
rm -rf ../IssmConfig/.libs ../IssmConfig/_libs
rm -rf ../MeshPartition/.libs ../MeshPartition/_libs
rm -rf ../MeshProfileIntersection/.libs ../MeshProfileIntersection/_libs
rm -rf ../NodeConnectivity/.libs ../NodeConnectivity/_libs
rm -rf ../ProcessRifts/.libs ../ProcessRifts/_libs
rm -rf ../Triangle/.libs ../Triangle/_libs
rm -rf ./io/.libs ./io/_libs
rm -f *.o
rm -f ../BamgConvertMesh/*.o
rm -f ../BamgConvertMesh/*.lo
rm -f ../BamgMesher/*.o
rm -f ../BamgMesher/*.lo
rm -f ../BamgTriangulate/*.o
rm -f ../BamgTriangulate/*.lo
rm -f ../Chaco/*.o
rm -f ../Chaco/*.lo
rm -f ../ContourToMesh/*.o
rm -f ../ContourToMesh/*.lo
rm -f ../ContourToNodes/*.o
rm -f ../ContourToNodes/*.lo
rm -f ../ElementConnectivity/*.o
rm -f ../ElementConnectivity/*.lo
rm -f ../ExpToLevelSet/*.o
rm -f ../ExpToLevelSet/*.lo
rm -f ../InterpFromGridToMesh/*.o
rm -f ../InterpFromGridToMesh/*.lo
rm -f ../InterpFromMesh2d/*.o
rm -f ../InterpFromMesh2d/*.lo
rm -f ../InterpFromMeshToGrid/*.o
rm -f ../InterpFromMeshToGrid/*.lo
rm -f ../InterpFromMeshToMesh2d/*.o
rm -f ../InterpFromMeshToMesh2d/*.lo
rm -f ../InterpFromMeshToMesh3d/*.o
rm -f ../InterpFromMeshToMesh3d/*.lo
rm -f ../IssmConfig/*.o
rm -f ../IssmConfig/*.lo
rm -f ../MeshPartition/*.o
rm -f ../MeshPartition/*.lo
rm -f ../MeshProfileIntersection/*.o
rm -f ../MeshProfileIntersection/*.lo
rm -f ../NodeConnectivity/*.o
rm -f ../NodeConnectivity/*.lo
rm -f ../ProcessRifts/*.o
rm -f ../ProcessRifts/*.lo
rm -f ../Triangle/*.o
rm -f ../Triangle/*.lo
rm -f ./io/*.o
rm -f ./io/*.lo
rm -f *.lo
rm -f *.tab.c
test -z "" || rm -f 
test . = "." || test -z "" || rm -f 
rm -f ../BamgConvertMesh/.deps/.dirstamp
rm -f ../BamgConvertMesh/.dirstamp
rm -f ../BamgMesher/.deps/.dirstamp
rm -f ../BamgMesher/.dirstamp
rm -f ../BamgTriangulate/.deps/.dirstamp
rm -f ../BamgTriangulate/.dirstamp
rm -f ../Chaco/.deps/.dirstamp
rm -f ../Chaco/.dirstamp
rm -f ../ContourToMesh/.deps/.dirstamp
rm -f ../ContourToMesh/.dirstamp
rm -f ../ContourToNodes/.deps/.dirstamp
rm -f ../ContourToNodes/.dirstamp
rm -f ../ElementConnectivity/.deps/.dirstamp
rm -f ../ElementConnectivity/.dirstamp
rm -f ../ExpToLevelSet/.deps/.dirstamp
rm -f ../ExpToLevelSet/.dirstamp
rm -f ../InterpFromGridToMesh/.deps/.dirstamp
rm -f ../InterpFromGridToMesh/.dirstamp
rm -f ../InterpFromMesh2d/.deps/.dirstamp
rm -f ../InterpFromMesh2d/.dirstamp
rm -f ../InterpFromMeshToGrid/.deps/.dirstamp
rm -f ../InterpFromMeshToGrid/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp
rm -f ../InterpFromMeshToMesh2d/.dirstamp
rm -f ../InterpFromMeshToMesh3d/.deps/.dirstamp
rm -f ../InterpFromMeshToMesh3d/.dirstamp
rm -f ../IssmConfig/.deps/.dirstamp
rm -f ../IssmConfig/.dirstamp
rm -f ../MeshPartition/.deps/.dirstamp
rm -f ../MeshPartition/.dirstamp
rm -f ../MeshProfileIntersection/.deps/.dirstamp
rm -f ../MeshProfileIntersection/.dirstamp
rm -f ../NodeConnectivity/.deps/.dirstamp
rm -f ../NodeConnectivity/.dirstamp
rm -f ../ProcessRifts/.deps/.dirstamp
rm -f ../ProcessRifts/.dirstamp
rm -f ../Triangle/.deps/.dirstamp
rm -f ../Triangle/.dirstamp
rm -f io/.deps/.dirstamp
rm -f io/.dirstamp
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
rm -f ../BamgConvertMesh/.deps/BamgConvertMesh_python_la-BamgConvertMesh.Plo
rm -f ../BamgMesher/.deps/BamgMesher_python_la-BamgMesher.Plo
rm -f ../BamgTriangulate/.deps/BamgTriangulate_python_la-BamgTriangulate.Plo
rm -f ../Chaco/.deps/Chaco_python_la-Chaco.Plo
rm -f ../ContourToMesh/.deps/ContourToMesh_python_la-ContourToMesh.Plo
rm -f ../ContourToNodes/.deps/ContourToNodes_python_la-ContourToNodes.Plo
rm -f ../ElementConnectivity/.deps/ElementConnectivity_python_la-ElementConnectivity.Plo
rm -f ../ExpToLevelSet/.deps/ExpToLevelSet_python_la-ExpToLevelSet.Plo
rm -f ../InterpFromGridToMesh/.deps/InterpFromGridToMesh_python_la-InterpFromGridToMesh.Plo
rm -f ../InterpFromMesh2d/.deps/InterpFromMesh2d_python_la-InterpFromMesh2d.Plo
rm -f ../InterpFromMeshToGrid/.deps/InterpFromMeshToGrid_python_la-InterpFromMeshToGrid.Plo
rm -f ../InterpFromMeshToMesh2d/.deps/InterpFromMeshToMesh2d_python_la-InterpFromMeshToMesh2d.Plo
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configure: ============================================================================
configure: =      Ice-sheet and Sea-level System Model (ISSM) 4.24 configuration      =
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configure: ============================================================================
configure: =                      Checking ISSM specific options                      =
configure: ============================================================================
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======================================================
                    Compiling ISSM                    
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Making with 8 CPUs
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  CXX      ../InterpFromMeshToGrid/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.lo
  CXX      ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.lo
  CXX      ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.lo
  CXX      ../IssmConfig/IssmConfig_matlab_la-IssmConfig.lo
  CXX      ../MeshPartition/MeshPartition_matlab_la-MeshPartition.lo
  CXX      ../MeshProfileIntersection/MeshProfileIntersection_matlab_la-MeshProfileIntersection.lo
  CXX      ../NodeConnectivity/NodeConnectivity_matlab_la-NodeConnectivity.lo
  CXX      ../PointCloudFindNeighbors/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.lo
  CXX      ../ProcessRifts/ProcessRifts_matlab_la-ProcessRifts.lo
  CXX      ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.lo
  CXX      ../Scotch/Scotch_matlab_la-Scotch.lo
  CXX      ../Triangle/Triangle_matlab_la-Triangle.lo
  CXX      ../Kriging/Kriging_matlab_la-Kriging.lo
  CXXLD    libISSMMatlab.la
  CXXLD    libISSMApi_matlab.la
  CXXLD    InterpFromGrid.la
  CXXLD    BamgConvertMesh_matlab.la
  CXXLD    BamgMesher_matlab.la
  CXXLD    BamgTriangulate_matlab.la
  CXXLD    ContourToMesh_matlab.la
  CXXLD    ContourToNodes_matlab.la
  CXXLD    DistanceToMaskBoundary_matlab.la
  CXXLD    ElementConnectivity_matlab.la
  CXXLD    ExpSimplify_matlab.la
  CXXLD    ExpToLevelSet_matlab.la
  CXXLD    InterpFromGridToMesh_matlab.la
  CXXLD    InterpFromMesh2d_matlab.la
  CXXLD    InterpFromMeshToGrid_matlab.la
  CXXLD    InterpFromMeshToMesh2d_matlab.la
  CXXLD    InterpFromMeshToMesh3d_matlab.la
  CXXLD    IssmConfig_matlab.la
  CXXLD    MeshPartition_matlab.la
  CXXLD    MeshProfileIntersection_matlab.la
  CXXLD    NodeConnectivity_matlab.la
  CXXLD    PointCloudFindNeighbors_matlab.la
  CXXLD    ProcessRifts_matlab.la
  CXXLD    PropagateFlagsFromConnectivity_matlab.la
  CXXLD    Scotch_matlab.la
  CXXLD    Triangle_matlab.la
  CXXLD    Kriging_matlab.la
make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[4]: Nothing to be done for 'all-am'.
make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[3]: Nothing to be done for 'all-am'.
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
Making install in src
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
Making install in c
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
  CXXLD    issm.exe
  CXXLD    issm_slc.exe
  CXXLD    issm_ocean.exe
  CXXLD    kriging.exe
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
  CXXLD    issm.exe
  CXXLD    issm_slc.exe
  CXXLD    issm_ocean.exe
  CXXLD    kriging.exe
 /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib'
 /bin/bash ../../libtool   --mode=install /usr/bin/install -c   libISSMCore.la libISSMOverload.la libISSMModules.la '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib'
libtool: install: /usr/bin/install -c .libs/libISSMCore.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.so
libtool: install: /usr/bin/install -c .libs/libISSMCore.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMCore.la
libtool: install: /usr/bin/install -c .libs/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.so
libtool: install: /usr/bin/install -c .libs/libISSMOverload.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMOverload.la
libtool: warning: relinking 'libISSMModules.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -g -O2 -g -O2 -avoid-version -o libISSMModules.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ./shared/Threads/libISSMModules_la-LaunchThread.lo ./shared/Threads/libISSMModules_la-PartitionRange.lo ./shared/Exp/libISSMModules_la-exp.lo ./shared/Triangle/libISSMModules_la-AssociateSegmentToElement.lo ./shared/Triangle/libISSMModules_la-GridInsideHole.lo ./shared/Triangle/libISSMModules_la-OrderSegments.lo ./shared/Triangle/libISSMModules_la-SplitMeshForRifts.lo ./shared/Triangle/libISSMModules_la-TriangleUtils.lo ./modules/Trianglex/libISSMModules_la-Trianglex.lo ./modules/ProcessRiftsx/libISSMModules_la-ProcessRiftsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo ./modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo ./modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo ./modules/InterpFromMeshToGridx/libISSMModules_la-InterpFromMeshToGridx.lo ./modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo ./modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo ./modules/NodeConnectivityx/libISSMModules_la-NodeConnectivityx.lo ./modules/ElementConnectivityx/libISSMModules_la-ElementConnectivityx.lo ./modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo ./modules/Krigingx/libISSMModules_la-Krigingx.lo ./modules/Krigingx/libISSMModules_la-pKrigingx.lo ./libISSMCore.la -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/triangle/install/lib -ltriangle -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lflapack -lfblas )
libtool: install: /usr/bin/install -c .libs/libISSMModules.soT /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.so
libtool: install: /usr/bin/install -c .libs/libISSMModules.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMModules.la
libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/scripts:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib
----------------------------------------------------------------------
Libraries have been installed in:
   /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib

If you ever happen to want to link against installed libraries
in a given directory, LIBDIR, you must either use libtool, and
specify the full pathname of the library, or use the '-LLIBDIR'
flag during linking and do at least one of the following:
   - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable
     during execution
   - add LIBDIR to the 'LD_RUN_PATH' environment variable
     during linking
   - use the '-Wl,-rpath -Wl,LIBDIR' linker flag
   - have your system administrator add LIBDIR to '/etc/ld.so.conf'

See any operating system documentation about shared libraries for
more information, such as the ld(1) and ld.so(8) manual pages.
----------------------------------------------------------------------
 /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin'
  /bin/bash ../../libtool   --mode=install /usr/bin/install -c issm.exe issm_slc.exe issm_ocean.exe kriging.exe '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin'
libtool: install: /usr/bin/install -c .libs/issm.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm.exe
libtool: install: /usr/bin/install -c .libs/issm_slc.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm_slc.exe
libtool: install: /usr/bin/install -c .libs/issm_ocean.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/issm_ocean.exe
libtool: install: /usr/bin/install -c .libs/kriging.exe /home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin/kriging.exe
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/c'
Making install in m
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
 /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/bin'
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/m'
Making install in wrappers
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
Making install in matlab
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
 /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib'
 /bin/bash ../../../libtool   --mode=install /usr/bin/install -c   libISSMMatlab.la libISSMApi_matlab.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromGrid.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la Kriging_matlab.la '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib'
libtool: warning: relinking 'libISSMMatlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -avoid-version -o libISSMMatlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ./io/libISSMMatlab_la-CheckNumMatlabArguments.lo ./io/libISSMMatlab_la-FetchMatlabData.lo ./io/libISSMMatlab_la-WriteMatlabData.lo ./../../c/libISSMCore.la ./../../c/libISSMModules.la -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lpetsc -ldl -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -ldmumps -lcmumps -lmumps_common -lpord -lzmumps -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lscalapack -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lflapack -lfblas -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lparmetis -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lmetis -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/libISSMMatlab.soT /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.so
libtool: install: /usr/bin/install -c .libs/libISSMMatlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMMatlab.la
libtool: install: /usr/bin/install -c .libs/libISSMApi_matlab.so /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi_matlab.so
libtool: install: /usr/bin/install -c .libs/libISSMApi_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/libISSMApi_matlab.la
libtool: warning: relinking 'BamgConvertMesh_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgConvertMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgConvertMesh/BamgConvertMesh_matlab_la-BamgConvertMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgConvertMesh_matlab.la
libtool: warning: relinking 'BamgMesher_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgMesher_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgMesher/BamgMesher_matlab_la-BamgMesher.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgMesher_matlab.la
libtool: warning: relinking 'BamgTriangulate_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgTriangulate_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../BamgTriangulate/BamgTriangulate_matlab_la-BamgTriangulate.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/BamgTriangulate_matlab.la
libtool: warning: relinking 'ContourToMesh_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ContourToMesh/ContourToMesh_matlab_la-ContourToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToMesh_matlab.la
libtool: warning: relinking 'ContourToNodes_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToNodes_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ContourToNodes/ContourToNodes_matlab_la-ContourToNodes.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ContourToNodes_matlab.la
libtool: warning: relinking 'DistanceToMaskBoundary_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o DistanceToMaskBoundary_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../DistanceToMaskBoundary/DistanceToMaskBoundary_matlab_la-DistanceToMaskBoundary.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/DistanceToMaskBoundary_matlab.la
libtool: warning: relinking 'ElementConnectivity_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ElementConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ElementConnectivity/ElementConnectivity_matlab_la-ElementConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ElementConnectivity_matlab.la
libtool: warning: relinking 'ExpSimplify_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpSimplify_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ExpSimplify/ExpSimplify_matlab_la-ExpSimplify.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpSimplify_matlab.la
libtool: warning: relinking 'ExpToLevelSet_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpToLevelSet_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ExpToLevelSet/ExpToLevelSet_matlab_la-ExpToLevelSet.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ExpToLevelSet_matlab.la
libtool: warning: relinking 'InterpFromGridToMesh_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromGridToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromGridToMesh/InterpFromGridToMesh_matlab_la-InterpFromGridToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGridToMesh_matlab.la
libtool: install: /usr/bin/install -c .libs/InterpFromGrid.mexa64 /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGrid.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromGrid.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromGrid.la
libtool: warning: relinking 'InterpFromMesh2d_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMesh2d/InterpFromMesh2d_matlab_la-InterpFromMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMesh2d_matlab.la
libtool: warning: relinking 'InterpFromMeshToGrid_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToGrid_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToGrid/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToGrid_matlab.la
libtool: warning: relinking 'InterpFromMeshToMesh2d_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh2d_matlab.la
libtool: warning: relinking 'InterpFromMeshToMesh3d_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh3d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/InterpFromMeshToMesh3d_matlab.la
libtool: warning: relinking 'IssmConfig_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o IssmConfig_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../IssmConfig/IssmConfig_matlab_la-IssmConfig.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/IssmConfig_matlab.la
libtool: warning: relinking 'MeshPartition_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshPartition_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../MeshPartition/MeshPartition_matlab_la-MeshPartition.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshPartition_matlab.la
libtool: warning: relinking 'MeshProfileIntersection_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshProfileIntersection_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../MeshProfileIntersection/MeshProfileIntersection_matlab_la-MeshProfileIntersection.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/MeshProfileIntersection_matlab.la
libtool: warning: relinking 'NodeConnectivity_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o NodeConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../NodeConnectivity/NodeConnectivity_matlab_la-NodeConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/NodeConnectivity_matlab.la
libtool: warning: relinking 'PointCloudFindNeighbors_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PointCloudFindNeighbors_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../PointCloudFindNeighbors/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PointCloudFindNeighbors_matlab.la
libtool: warning: relinking 'ProcessRifts_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ProcessRifts_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../ProcessRifts/ProcessRifts_matlab_la-ProcessRifts.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/ProcessRifts_matlab.la
libtool: warning: relinking 'PropagateFlagsFromConnectivity_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PropagateFlagsFromConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/PropagateFlagsFromConnectivity_matlab.la
libtool: warning: relinking 'Scotch_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Scotch_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Scotch/Scotch_matlab_la-Scotch.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/Scotch_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/Scotch_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Scotch_matlab.la
libtool: warning: relinking 'Triangle_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Triangle_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Triangle/Triangle_matlab_la-Triangle.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran -L/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/triangle/install/lib -ltriangle )
libtool: install: /usr/bin/install -c .libs/Triangle_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/Triangle_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Triangle_matlab.la
libtool: warning: relinking 'Kriging_matlab.la'
libtool: install: (cd /home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-Ice-Ocean/libtool"  --silent --tag CXX --mode=relink mpicxx -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -g -O2 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Kriging_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib ../Kriging/Kriging_matlab_la-Kriging.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/usr/lib/x86_64-linux-gnu -lgfortran )
libtool: install: /usr/bin/install -c .libs/Kriging_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.mexa64
libtool: install: /usr/bin/install -c .libs/Kriging_matlab.lai /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib/Kriging_matlab.la
libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/aux-config:/home/jenkins/workspace/Debian_Linux-Ice-Ocean/scripts:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib
----------------------------------------------------------------------
Libraries have been installed in:
   /home/jenkins/workspace/Debian_Linux-Ice-Ocean/lib

If you ever happen to want to link against installed libraries
in a given directory, LIBDIR, you must either use libtool, and
specify the full pathname of the library, or use the '-LLIBDIR'
flag during linking and do at least one of the following:
   - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable
     during execution
   - add LIBDIR to the 'LD_RUN_PATH' environment variable
     during linking
   - use the '-Wl,-rpath -Wl,LIBDIR' linker flag
   - have your system administrator add LIBDIR to '/etc/ld.so.conf'

See any operating system documentation about shared libraries for
more information, such as the ld(1) and ld.so(8) manual pages.
----------------------------------------------------------------------
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers/matlab'
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src/wrappers'
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[3]: Nothing to be done for 'install-exec-am'.
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/src'
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
make[2]: Nothing to be done for 'install-exec-am'.
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean'
+++ Removing old junit reports from: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/nightlylog/results 

+++ Running case: MATLAB-4001 
+++ working dir: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/nightlylog

[41;37m   step #1: Parameters   [0m

saving data in: Models/IceOcean.Parameters

[41;37m   step #2: Bathymetry   [0m

saving data in: Models/IceOcean.Bathymetry

[41;37m   step #3: IceSheetGeometry   [0m

saving data in: Models/IceOcean.IceSheetGeometry

[41;37m   step #4: GetMITgcm   [0m

--2025-09-03 10:43:07--  <a href='https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz'>https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz</a>
Resolving github.com (github.com)... 140.82.116.3
Connecting to github.com (github.com)|140.82.116.3|:443... connected.
HTTP request sent, awaiting response... 302 Found
Location: <a href='https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i'>https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i</a> [following]
--2025-09-03 10:43:08--  <a href='https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i'>https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i</a>
Resolving codeload.github.com (codeload.github.com)... 140.82.116.9
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2025-09-03 10:43:19 (14.9 MB/s) - checkpoint68i.tar.gz saved [172875785]

MITgcm-checkpoint68i/
MITgcm-checkpoint68i/.github/
MITgcm-checkpoint68i/.github/ISSUE_TEMPLATE.md
MITgcm-checkpoint68i/.github/PULL_REQUEST_TEMPLATE.md
MITgcm-checkpoint68i/.github/workflows/
MITgcm-checkpoint68i/.github/workflows/build_testing.yml
MITgcm-checkpoint68i/.gitignore
MITgcm-checkpoint68i/.readthedocs.yml
MITgcm-checkpoint68i/LICENSE.txt
MITgcm-checkpoint68i/README.md
MITgcm-checkpoint68i/doc/
MITgcm-checkpoint68i/doc/Makefile
MITgcm-checkpoint68i/doc/_extensions/
MITgcm-checkpoint68i/doc/_extensions/mitgcm.py
MITgcm-checkpoint68i/doc/_static/
MITgcm-checkpoint68i/doc/_static/css/
MITgcm-checkpoint68i/doc/_static/css/custom.css
MITgcm-checkpoint68i/doc/_static/css/wrap_tables.css
MITgcm-checkpoint68i/doc/algorithm/
MITgcm-checkpoint68i/doc/algorithm/adv-schemes.rst
MITgcm-checkpoint68i/doc/algorithm/algorithm.rst
MITgcm-checkpoint68i/doc/algorithm/c-grid.rst
MITgcm-checkpoint68i/doc/algorithm/crank-nicol.rst
MITgcm-checkpoint68i/doc/algorithm/figs/
MITgcm-checkpoint68i/doc/algorithm/figs/adams-bashforth-staggered.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/adams-bashforth-staggered.svg
MITgcm-checkpoint68i/doc/algorithm/figs/adams-bashforth-sync.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/adams-bashforth-sync.svg
MITgcm-checkpoint68i/doc/algorithm/figs/advect-1d-hi.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/advect-1d-hi.png
MITgcm-checkpoint68i/doc/algorithm/figs/advect-1d-lo.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/advect-1d-lo.png
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-hi-diag.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-hi-diag.png
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-lo-diag.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-lo-diag.png
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-mid-diag.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/advect-2d-mid-diag.png
MITgcm-checkpoint68i/doc/algorithm/figs/cgrid3d.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/cgrid3d.svg
MITgcm-checkpoint68i/doc/algorithm/figs/hgrid-abcd.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/hgrid-abcd.svg
MITgcm-checkpoint68i/doc/algorithm/figs/multiDim_CS.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/multiDim_CS.png
MITgcm-checkpoint68i/doc/algorithm/figs/oscil+damp_AB2.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/oscil+damp_AB2.png
MITgcm-checkpoint68i/doc/algorithm/figs/pressure-method-rigid-lid.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/pressure-method-rigid-lid.svg
MITgcm-checkpoint68i/doc/algorithm/figs/stab_AB3_dampR.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/stab_AB3_dampR.svg
MITgcm-checkpoint68i/doc/algorithm/figs/stab_AB3_oscil.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/stab_AB3_oscil.svg
MITgcm-checkpoint68i/doc/algorithm/figs/vgrid-accur-center.pdf
MITgcm-checkpoint68i/doc/algorithm/figs/vgrid-accur-center.svg
MITgcm-checkpoint68i/doc/algorithm/figs/vgrid-xz.pdf
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MITgcm-checkpoint68i/eesupp/src/exch_sm_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_agrid_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_bgrid_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_dgrid_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_xy_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_xyz_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_xy_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_xyz_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_z_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_ag_rl.F
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_tr_rl.F
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_uv_rl.F
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_uv_rs.F
MITgcm-checkpoint68i/eesupp/src/fool_the_compiler.F
MITgcm-checkpoint68i/eesupp/src/gather_2d_rx.template
MITgcm-checkpoint68i/eesupp/src/gather_2d_wh_rx.template
MITgcm-checkpoint68i/eesupp/src/gather_vec_rx.template
MITgcm-checkpoint68i/eesupp/src/gather_xz.F
MITgcm-checkpoint68i/eesupp/src/gather_yz.F
MITgcm-checkpoint68i/eesupp/src/get_periodic_interval.F
MITgcm-checkpoint68i/eesupp/src/global_max.F
MITgcm-checkpoint68i/eesupp/src/global_sum.F
MITgcm-checkpoint68i/eesupp/src/global_sum_singlecpu.F
MITgcm-checkpoint68i/eesupp/src/global_sum_tile.F
MITgcm-checkpoint68i/eesupp/src/global_vec_sum.F
MITgcm-checkpoint68i/eesupp/src/gsl_ieee_env.c
MITgcm-checkpoint68i/eesupp/src/gsum.F
MITgcm-checkpoint68i/eesupp/src/ini_communication_patterns.F
MITgcm-checkpoint68i/eesupp/src/ini_procs.F
MITgcm-checkpoint68i/eesupp/src/ini_threading_environment.F
MITgcm-checkpoint68i/eesupp/src/lef_zero.F
MITgcm-checkpoint68i/eesupp/src/main.F
MITgcm-checkpoint68i/eesupp/src/master_cpu_io.F
MITgcm-checkpoint68i/eesupp/src/master_cpu_thread.F
MITgcm-checkpoint68i/eesupp/src/mds_byteswapi4.F
MITgcm-checkpoint68i/eesupp/src/mds_byteswapr4.F
MITgcm-checkpoint68i/eesupp/src/mds_byteswapr8.F
MITgcm-checkpoint68i/eesupp/src/mds_flush.F
MITgcm-checkpoint68i/eesupp/src/mds_reclen.F
MITgcm-checkpoint68i/eesupp/src/mdsfindunit.F
MITgcm-checkpoint68i/eesupp/src/memsync.F
MITgcm-checkpoint68i/eesupp/src/nml_change_syntax.F
MITgcm-checkpoint68i/eesupp/src/nml_set_terminator.F
MITgcm-checkpoint68i/eesupp/src/open_copy_data_file.F
MITgcm-checkpoint68i/eesupp/src/print.F
MITgcm-checkpoint68i/eesupp/src/ptwrapper.c
MITgcm-checkpoint68i/eesupp/src/reset_halo.F
MITgcm-checkpoint68i/eesupp/src/scatter_2d_rx.template
MITgcm-checkpoint68i/eesupp/src/scatter_2d_wh_rx.template
MITgcm-checkpoint68i/eesupp/src/scatter_vec_rx.template
MITgcm-checkpoint68i/eesupp/src/scatter_xz.F
MITgcm-checkpoint68i/eesupp/src/scatter_yz.F
MITgcm-checkpoint68i/eesupp/src/setdir.c
MITgcm-checkpoint68i/eesupp/src/setrlstk.c
MITgcm-checkpoint68i/eesupp/src/sigreg.c
MITgcm-checkpoint68i/eesupp/src/stop_if_error.F
MITgcm-checkpoint68i/eesupp/src/tim.c
MITgcm-checkpoint68i/eesupp/src/timer_stats.c
MITgcm-checkpoint68i/eesupp/src/timers.F
MITgcm-checkpoint68i/eesupp/src/utils.F
MITgcm-checkpoint68i/eesupp/src/write_utils.F
MITgcm-checkpoint68i/jobs/
MITgcm-checkpoint68i/jobs/run_mitgcm_aer.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_eaps.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_gfdl.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_itrda.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_sp4_bluesky.csh
MITgcm-checkpoint68i/jobs/run_optim.csh
MITgcm-checkpoint68i/lsopt/
MITgcm-checkpoint68i/lsopt/Makefile
MITgcm-checkpoint68i/lsopt/Makefile_macosx
MITgcm-checkpoint68i/lsopt/README.md
MITgcm-checkpoint68i/lsopt/blas1.h
MITgcm-checkpoint68i/lsopt/cubic.F
MITgcm-checkpoint68i/lsopt/data.ctrl
MITgcm-checkpoint68i/lsopt/data.ecco
MITgcm-checkpoint68i/lsopt/data.optim
MITgcm-checkpoint68i/lsopt/dgscale.F
MITgcm-checkpoint68i/lsopt/dostore.F
MITgcm-checkpoint68i/lsopt/hessupd.F
MITgcm-checkpoint68i/lsopt/instore.F
MITgcm-checkpoint68i/lsopt/libblas1.a_IRIX64.gz
MITgcm-checkpoint68i/lsopt/libblas1.a_SUN.gz
MITgcm-checkpoint68i/lsopt/libgoto_it2-r0.95.so.gz
MITgcm-checkpoint68i/lsopt/libgoto_p4_512-r0.94.so.gz
MITgcm-checkpoint68i/lsopt/lsline.F
MITgcm-checkpoint68i/lsopt/lsopt_doc.txt
MITgcm-checkpoint68i/lsopt/lsopt_top.F
MITgcm-checkpoint68i/lsopt/lsupdxx.F
MITgcm-checkpoint68i/lsopt/lswri.F
MITgcm-checkpoint68i/lsopt/outstore.F
MITgcm-checkpoint68i/model/
MITgcm-checkpoint68i/model/inc/
MITgcm-checkpoint68i/model/inc/CG2D.h
MITgcm-checkpoint68i/model/inc/CG3D.h
MITgcm-checkpoint68i/model/inc/CPP_OPTIONS.h
MITgcm-checkpoint68i/model/inc/DXC_MACROS.h
MITgcm-checkpoint68i/model/inc/DXF_MACROS.h
MITgcm-checkpoint68i/model/inc/DXG_MACROS.h
MITgcm-checkpoint68i/model/inc/DXV_MACROS.h
MITgcm-checkpoint68i/model/inc/DYC_MACROS.h
MITgcm-checkpoint68i/model/inc/DYF_MACROS.h
MITgcm-checkpoint68i/model/inc/DYG_MACROS.h
MITgcm-checkpoint68i/model/inc/DYNVARS.h
MITgcm-checkpoint68i/model/inc/DYU_MACROS.h
MITgcm-checkpoint68i/model/inc/EOS.h
MITgcm-checkpoint68i/model/inc/FCORI_MACROS.h
MITgcm-checkpoint68i/model/inc/FFIELDS.h
MITgcm-checkpoint68i/model/inc/GRID.h
MITgcm-checkpoint68i/model/inc/GRID_MACROS.h
MITgcm-checkpoint68i/model/inc/HFACC_MACROS.h
MITgcm-checkpoint68i/model/inc/HFACS_MACROS.h
MITgcm-checkpoint68i/model/inc/HFACW_MACROS.h
MITgcm-checkpoint68i/model/inc/MASKS_MACROS.h
MITgcm-checkpoint68i/model/inc/MASKW_MACROS.h
MITgcm-checkpoint68i/model/inc/NH_VARS.h
MITgcm-checkpoint68i/model/inc/PARAMS.h
MITgcm-checkpoint68i/model/inc/RAS_MACROS.h
MITgcm-checkpoint68i/model/inc/RAW_MACROS.h
MITgcm-checkpoint68i/model/inc/RA_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXC_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXF_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXG_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXV_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYC_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYF_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYG_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYU_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_HFACC_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_HFACS_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_HFACW_MACROS.h
MITgcm-checkpoint68i/model/inc/RESTART.h
MITgcm-checkpoint68i/model/inc/SET_GRID.h
MITgcm-checkpoint68i/model/inc/SIZE.h
MITgcm-checkpoint68i/model/inc/SOLVE_FOR_PRESSURE.h
MITgcm-checkpoint68i/model/inc/SOLVE_FOR_PRESSURE3D.h
MITgcm-checkpoint68i/model/inc/SURFACE.h
MITgcm-checkpoint68i/model/inc/TANPHIATU_MACROS.h
MITgcm-checkpoint68i/model/inc/TANPHIATV_MACROS.h
MITgcm-checkpoint68i/model/inc/THE_MODEL_COMMON_BLOCKS.h
MITgcm-checkpoint68i/model/inc/XC_MACROS.h
MITgcm-checkpoint68i/model/inc/YC_MACROS.h
MITgcm-checkpoint68i/model/src/
MITgcm-checkpoint68i/model/src/adams_bashforth2.F
MITgcm-checkpoint68i/model/src/adams_bashforth3.F
MITgcm-checkpoint68i/model/src/add_walls2masks.F
MITgcm-checkpoint68i/model/src/apply_forcing.F
MITgcm-checkpoint68i/model/src/calc_3d_diffusivity.F
MITgcm-checkpoint68i/model/src/calc_adv_flow.F
MITgcm-checkpoint68i/model/src/calc_div_ghat.F
MITgcm-checkpoint68i/model/src/calc_eddy_stress.F
MITgcm-checkpoint68i/model/src/calc_grad_phi_fv.F
MITgcm-checkpoint68i/model/src/calc_grad_phi_hyd.F
MITgcm-checkpoint68i/model/src/calc_grad_phi_surf.F
MITgcm-checkpoint68i/model/src/calc_grid_angles.F
MITgcm-checkpoint68i/model/src/calc_gw.F
MITgcm-checkpoint68i/model/src/calc_ivdc.F
MITgcm-checkpoint68i/model/src/calc_oce_mxlayer.F
MITgcm-checkpoint68i/model/src/calc_phi_hyd.F
MITgcm-checkpoint68i/model/src/calc_r_star.F
MITgcm-checkpoint68i/model/src/calc_surf_dr.F
MITgcm-checkpoint68i/model/src/calc_viscosity.F
MITgcm-checkpoint68i/model/src/calc_wsurf_tr.F
MITgcm-checkpoint68i/model/src/cg2d.F
MITgcm-checkpoint68i/model/src/cg2d_ex0.F
MITgcm-checkpoint68i/model/src/cg2d_nsa.F
MITgcm-checkpoint68i/model/src/cg2d_sr.F
MITgcm-checkpoint68i/model/src/cg3d.F
MITgcm-checkpoint68i/model/src/cg3d_ex0.F
MITgcm-checkpoint68i/model/src/check_pickup.F
MITgcm-checkpoint68i/model/src/config_check.F
MITgcm-checkpoint68i/model/src/config_summary.F
MITgcm-checkpoint68i/model/src/convective_adjustment.F
MITgcm-checkpoint68i/model/src/convective_adjustment_ini.F
MITgcm-checkpoint68i/model/src/convective_weights.F
MITgcm-checkpoint68i/model/src/convectively_mixtracer.F
MITgcm-checkpoint68i/model/src/correction_step.F
MITgcm-checkpoint68i/model/src/cycle_ab_tracer.F
MITgcm-checkpoint68i/model/src/cycle_tracer.F
MITgcm-checkpoint68i/model/src/diags_oceanic_surf_flux.F
MITgcm-checkpoint68i/model/src/diags_phi_hyd.F
MITgcm-checkpoint68i/model/src/diags_phi_rlow.F
MITgcm-checkpoint68i/model/src/diags_rho.F
MITgcm-checkpoint68i/model/src/diags_sound_speed.F
MITgcm-checkpoint68i/model/src/do_atmospheric_phys.F
MITgcm-checkpoint68i/model/src/do_fields_blocking_exchanges.F
MITgcm-checkpoint68i/model/src/do_oceanic_phys.F
MITgcm-checkpoint68i/model/src/do_stagger_fields_exchanges.F
MITgcm-checkpoint68i/model/src/do_statevars_diags.F
MITgcm-checkpoint68i/model/src/do_statevars_tave.F
MITgcm-checkpoint68i/model/src/do_the_model_io.F
MITgcm-checkpoint68i/model/src/do_write_pickup.F
MITgcm-checkpoint68i/model/src/dynamics.F
MITgcm-checkpoint68i/model/src/external_fields_load.F
MITgcm-checkpoint68i/model/src/external_forcing.F
MITgcm-checkpoint68i/model/src/external_forcing_surf.F
MITgcm-checkpoint68i/model/src/find_alpha.F
MITgcm-checkpoint68i/model/src/find_hyd_press_1d.F
MITgcm-checkpoint68i/model/src/find_rho.F
MITgcm-checkpoint68i/model/src/forcing_surf_relax.F
MITgcm-checkpoint68i/model/src/forward_step.F
MITgcm-checkpoint68i/model/src/freesurf_rescale_g.F
MITgcm-checkpoint68i/model/src/freeze_surface.F
MITgcm-checkpoint68i/model/src/grad_sigma.F
MITgcm-checkpoint68i/model/src/gsw_teos10.F
MITgcm-checkpoint68i/model/src/impldiff.F
MITgcm-checkpoint68i/model/src/ini_cartesian_grid.F
MITgcm-checkpoint68i/model/src/ini_cg2d.F
MITgcm-checkpoint68i/model/src/ini_cg3d.F
MITgcm-checkpoint68i/model/src/ini_cori.F
MITgcm-checkpoint68i/model/src/ini_curvilinear_grid.F
MITgcm-checkpoint68i/model/src/ini_cylinder_grid.F
MITgcm-checkpoint68i/model/src/ini_depths.F
MITgcm-checkpoint68i/model/src/ini_dynvars.F
MITgcm-checkpoint68i/model/src/ini_eos.F
MITgcm-checkpoint68i/model/src/ini_ffields.F
MITgcm-checkpoint68i/model/src/ini_fields.F
MITgcm-checkpoint68i/model/src/ini_forcing.F
MITgcm-checkpoint68i/model/src/ini_global_domain.F
MITgcm-checkpoint68i/model/src/ini_grid.F
MITgcm-checkpoint68i/model/src/ini_linear_phisurf.F
MITgcm-checkpoint68i/model/src/ini_local_grid.F
MITgcm-checkpoint68i/model/src/ini_masks_etc.F
MITgcm-checkpoint68i/model/src/ini_mixing.F
MITgcm-checkpoint68i/model/src/ini_mnc_vars.F
MITgcm-checkpoint68i/model/src/ini_model_io.F
MITgcm-checkpoint68i/model/src/ini_nh_fields.F
MITgcm-checkpoint68i/model/src/ini_nh_vars.F
MITgcm-checkpoint68i/model/src/ini_nlfs_vars.F
MITgcm-checkpoint68i/model/src/ini_p_ground.F
MITgcm-checkpoint68i/model/src/ini_parms.F
MITgcm-checkpoint68i/model/src/ini_pressure.F
MITgcm-checkpoint68i/model/src/ini_psurf.F
MITgcm-checkpoint68i/model/src/ini_salt.F
MITgcm-checkpoint68i/model/src/ini_sigma_hfac.F
MITgcm-checkpoint68i/model/src/ini_spherical_polar_grid.F
MITgcm-checkpoint68i/model/src/ini_theta.F
MITgcm-checkpoint68i/model/src/ini_vel.F
MITgcm-checkpoint68i/model/src/ini_vertical_grid.F
MITgcm-checkpoint68i/model/src/initialise_fixed.F
MITgcm-checkpoint68i/model/src/initialise_varia.F
MITgcm-checkpoint68i/model/src/integr_continuity.F
MITgcm-checkpoint68i/model/src/integrate_for_w.F
MITgcm-checkpoint68i/model/src/load_fields_driver.F
MITgcm-checkpoint68i/model/src/load_grid_spacing.F
MITgcm-checkpoint68i/model/src/load_ref_files.F
MITgcm-checkpoint68i/model/src/main_do_loop.F
MITgcm-checkpoint68i/model/src/model_ad_diff.list
MITgcm-checkpoint68i/model/src/momentum_correction_step.F
MITgcm-checkpoint68i/model/src/packages_boot.F
MITgcm-checkpoint68i/model/src/packages_check.F
MITgcm-checkpoint68i/model/src/packages_error_msg.F
MITgcm-checkpoint68i/model/src/packages_init_fixed.F
MITgcm-checkpoint68i/model/src/packages_init_variables.F
MITgcm-checkpoint68i/model/src/packages_print_msg.F
MITgcm-checkpoint68i/model/src/packages_readparms.F
MITgcm-checkpoint68i/model/src/packages_unused_msg.F
MITgcm-checkpoint68i/model/src/packages_write_pickup.F
MITgcm-checkpoint68i/model/src/plot_field.F
MITgcm-checkpoint68i/model/src/port_rand.F
MITgcm-checkpoint68i/model/src/post_cg3d.F
MITgcm-checkpoint68i/model/src/pre_cg3d.F
MITgcm-checkpoint68i/model/src/pressure_for_eos.F
MITgcm-checkpoint68i/model/src/read_pickup.F
MITgcm-checkpoint68i/model/src/remove_mean.F
MITgcm-checkpoint68i/model/src/reset_nlfs_vars.F
MITgcm-checkpoint68i/model/src/rotate_spherical_polar_grid.F
MITgcm-checkpoint68i/model/src/rotate_uv2en.F
MITgcm-checkpoint68i/model/src/salt_integrate.F
MITgcm-checkpoint68i/model/src/seawater.F
MITgcm-checkpoint68i/model/src/set_defaults.F
MITgcm-checkpoint68i/model/src/set_grid_factors.F
MITgcm-checkpoint68i/model/src/set_parms.F
MITgcm-checkpoint68i/model/src/set_ref_state.F
MITgcm-checkpoint68i/model/src/solve_for_pressure.F
MITgcm-checkpoint68i/model/src/solve_pentadiagonal.F
MITgcm-checkpoint68i/model/src/solve_tridiagonal.F
MITgcm-checkpoint68i/model/src/solve_uv_tridiago.F
MITgcm-checkpoint68i/model/src/state_summary.F
MITgcm-checkpoint68i/model/src/swfrac.F
MITgcm-checkpoint68i/model/src/taueddy_init_varia.F
MITgcm-checkpoint68i/model/src/taueddy_tendency_apply.F
MITgcm-checkpoint68i/model/src/temp_integrate.F
MITgcm-checkpoint68i/model/src/the_main_loop.F
MITgcm-checkpoint68i/model/src/the_model_main.F
MITgcm-checkpoint68i/model/src/thermodynamics.F
MITgcm-checkpoint68i/model/src/timestep.F
MITgcm-checkpoint68i/model/src/timestep_tracer.F
MITgcm-checkpoint68i/model/src/timestep_wvel.F
MITgcm-checkpoint68i/model/src/tracers_correction_step.F
MITgcm-checkpoint68i/model/src/tracers_iigw_correction.F
MITgcm-checkpoint68i/model/src/turnoff_model_io.F
MITgcm-checkpoint68i/model/src/update_cg2d.F
MITgcm-checkpoint68i/model/src/update_etah.F
MITgcm-checkpoint68i/model/src/update_etaws.F
MITgcm-checkpoint68i/model/src/update_masks_etc.F
MITgcm-checkpoint68i/model/src/update_r_star.F
MITgcm-checkpoint68i/model/src/update_sigma.F
MITgcm-checkpoint68i/model/src/update_surf_dr.F
MITgcm-checkpoint68i/model/src/write_grid.F
MITgcm-checkpoint68i/model/src/write_pickup.F
MITgcm-checkpoint68i/model/src/write_state.F
MITgcm-checkpoint68i/optim/
MITgcm-checkpoint68i/optim/Makefile
MITgcm-checkpoint68i/optim/Makefile_macosx
MITgcm-checkpoint68i/optim/README.md
MITgcm-checkpoint68i/optim/blas1.h
MITgcm-checkpoint68i/optim/data.ctrl
MITgcm-checkpoint68i/optim/data.ecco
MITgcm-checkpoint68i/optim/data.optim
MITgcm-checkpoint68i/optim/flowchart_optim.txt
MITgcm-checkpoint68i/optim/minimization.h
MITgcm-checkpoint68i/optim/optim.h
MITgcm-checkpoint68i/optim/optim_initmod.F
MITgcm-checkpoint68i/optim/optim_main.F
MITgcm-checkpoint68i/optim/optim_numbmod.F
MITgcm-checkpoint68i/optim/optim_readdata.F
MITgcm-checkpoint68i/optim/optim_sub.F
MITgcm-checkpoint68i/optim/optim_write_control.F
MITgcm-checkpoint68i/optim/optim_writedata.F
MITgcm-checkpoint68i/optim/simul.F
MITgcm-checkpoint68i/optim/to_do.txt
MITgcm-checkpoint68i/optim/utils.F
MITgcm-checkpoint68i/optim/xerbla.F
MITgcm-checkpoint68i/pkg/
MITgcm-checkpoint68i/pkg/admtlm/
MITgcm-checkpoint68i/pkg/admtlm/ADMTLM_OPTIONS.h
MITgcm-checkpoint68i/pkg/admtlm/admtlm_bypassad.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_driver.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd2model.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_init_fixed.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_map.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_metric.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_model2dsvd.F
MITgcm-checkpoint68i/pkg/admtlm/arpack_debug.h
MITgcm-checkpoint68i/pkg/aim_v23/
MITgcm-checkpoint68i/pkg/aim_v23/AIM2DYN.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_CO2.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_FFIELDS.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_GRID.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_OPTIONS.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_PARAMS.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_SIZE.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_TAVE.h
MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2dyn.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2land.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_aim2sioce.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_diagnostics_init.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_do_co2.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_do_physics.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_dyn2aim.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_fields_load.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_initialise.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_land2aim.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_land_impl.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_mnc_init.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_readparms.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_sice2aim.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_sice_impl.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_surf_bc.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_tendency_apply.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_v23_description.tex
MITgcm-checkpoint68i/pkg/aim_v23/aim_write_local.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_write_phys.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_write_tave.F
MITgcm-checkpoint68i/pkg/aim_v23/com_cnvcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_forcing.h
MITgcm-checkpoint68i/pkg/aim_v23/com_forcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_lsccon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_physcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_physvar.h
MITgcm-checkpoint68i/pkg/aim_v23/com_radcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_radvar.h
MITgcm-checkpoint68i/pkg/aim_v23/com_sflcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_vdicon.h
MITgcm-checkpoint68i/pkg/aim_v23/phy_const.h
MITgcm-checkpoint68i/pkg/aim_v23/phy_convmf.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_driver.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_inphys.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_lscond.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_radiat.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_shtorh.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_snow_precip.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_land.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_ocean.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_post.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_prep.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_suflux_sice.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_vdifsc.F
MITgcm-checkpoint68i/pkg/atm2d/
MITgcm-checkpoint68i/pkg/atm2d/AGRID.h
MITgcm-checkpoint68i/pkg/atm2d/ATM2D_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm2d/ATM2D_VARS.h
MITgcm-checkpoint68i/pkg/atm2d/ATMSIZE.h
MITgcm-checkpoint68i/pkg/atm2d/CPLIDS.h
MITgcm-checkpoint68i/pkg/atm2d/DRIVER.h
MITgcm-checkpoint68i/pkg/atm2d/OCNIDS.h
MITgcm-checkpoint68i/pkg/atm2d/OCNSIZE.h
MITgcm-checkpoint68i/pkg/atm2d/OCNVARS.h
MITgcm-checkpoint68i/pkg/atm2d/accept_component_registrations.F
MITgcm-checkpoint68i/pkg/atm2d/atm2d_finish.F
MITgcm-checkpoint68i/pkg/atm2d/atm2d_init_fixed.F
MITgcm-checkpoint68i/pkg/atm2d/atm2d_init_vars.F
MITgcm-checkpoint68i/pkg/atm2d/atm2d_read_pickup.F
MITgcm-checkpoint68i/pkg/atm2d/atm2d_readparms.F
MITgcm-checkpoint68i/pkg/atm2d/atm2d_write_pickup.F
MITgcm-checkpoint68i/pkg/atm2d/atm2ocn_main.F
MITgcm-checkpoint68i/pkg/atm2d/calc_1dto2d.F
MITgcm-checkpoint68i/pkg/atm2d/calc_fileload.F
MITgcm-checkpoint68i/pkg/atm2d/calc_zonal_means.F
MITgcm-checkpoint68i/pkg/atm2d/cpl_recv_ocn_fields.F
MITgcm-checkpoint68i/pkg/atm2d/cpl_recv_ocn_ocnconfig.F
MITgcm-checkpoint68i/pkg/atm2d/cpl_register_ocn.F
MITgcm-checkpoint68i/pkg/atm2d/cpl_send_ocn_atmconfig.F
MITgcm-checkpoint68i/pkg/atm2d/cpl_send_ocn_fields.F
MITgcm-checkpoint68i/pkg/atm2d/ctrparam.h
MITgcm-checkpoint68i/pkg/atm2d/exch_component_configs.F
MITgcm-checkpoint68i/pkg/atm2d/fixed_flux_add.F
MITgcm-checkpoint68i/pkg/atm2d/forward_step_atm2d.F
MITgcm-checkpoint68i/pkg/atm2d/get_ocnvars.F
MITgcm-checkpoint68i/pkg/atm2d/init_atm2d.F
MITgcm-checkpoint68i/pkg/atm2d/init_sumvars.F
MITgcm-checkpoint68i/pkg/atm2d/initialise.F
MITgcm-checkpoint68i/pkg/atm2d/month_end_diags.F
MITgcm-checkpoint68i/pkg/atm2d/norm_ocn_fluxes.F
MITgcm-checkpoint68i/pkg/atm2d/pass_thsice_fluxes.F
MITgcm-checkpoint68i/pkg/atm2d/put_ocnvars.F
MITgcm-checkpoint68i/pkg/atm2d/read_atmos.F
MITgcm-checkpoint68i/pkg/atm2d/relax_add.F
MITgcm-checkpoint68i/pkg/atm2d/subtract_means.F
MITgcm-checkpoint68i/pkg/atm2d/sum_ocn_fluxes.F
MITgcm-checkpoint68i/pkg/atm2d/sum_thsice_out.F
MITgcm-checkpoint68i/pkg/atm2d/sum_yr_end_diags.F
MITgcm-checkpoint68i/pkg/atm2d/tave_end_diags.F
MITgcm-checkpoint68i/pkg/atm2d/yr_end_diags.F
MITgcm-checkpoint68i/pkg/atm_common/
MITgcm-checkpoint68i/pkg/atm_common/ATM_COMMON_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm_common/atm_diagnostics_init.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/
MITgcm-checkpoint68i/pkg/atm_compon_interf/ATMCPL.h
MITgcm-checkpoint68i/pkg/atm_compon_interf/ATM_CPL_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm_compon_interf/CPL_PARAMS.h
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_apply_import.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_check_cplconfig.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_cpl_read_pickup.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_export_atmconfig.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_export_fields.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_export_fld.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_get_atmconfig.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_import_fields.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_import_ocnconfig.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_aim_fields.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_aim_wndstr.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_dynvars.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_land.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_my_data.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_surfflux.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/atm_store_thsice.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_exch_configs.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_export_import_data.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_import_cplparms.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_ini_vars.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_init.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_init_fixed.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_output.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_readparms.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_register.F
MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_write_pickup.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/ATMIDS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/ATMVARS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPLIDS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPL_MAP2GRIDS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPL_PARAMS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPP_EEOPTIONS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPP_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/NOTES
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/OCNIDS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/OCNVARS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/README
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/accept_component_registrations.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/atm_to_ocn_maprunoff.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/atm_to_ocn_mapxyr8.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/coupler.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_check_cplconfig.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_init_atm_vars.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_init_ocn_vars.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_read_params.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_recv_atm_atmconfig.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_recv_atm_fields.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_recv_ocn_fields.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_recv_ocn_ocnconfig.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_register_atm.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_register_ocn.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_atm_cplparms.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_atm_fields.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_atm_ocnconfig.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_ocn_atmconfig.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_ocn_cplparms.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/cpl_send_ocn_fields.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/exch_component_configs.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/initialise.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/mds_byteswap.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/ocn_to_atm_mapxyr8.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/set_runoffmap.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/setdir.c
MITgcm-checkpoint68i/pkg/atm_phys/
MITgcm-checkpoint68i/pkg/atm_phys/ATM_PHYS_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm_phys/ATM_PHYS_PARAMS.h
MITgcm-checkpoint68i/pkg/atm_phys/ATM_PHYS_VARS.h
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_check.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_diagnostics_init.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_driver.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_dyn2phys.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_init_fixed.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_init_varia.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_read_pickup.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_readparms.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_tendency_apply.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_write_pickup.F
MITgcm-checkpoint68i/pkg/atm_phys/constants_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/dargan_bettsmiller_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/diffusivity_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/gcm_params_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/lscale_cond_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/mixed_layer_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/monin_obukhov_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/my25_turb_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/atm_phys_driver.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/constants.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/diffusivity.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/diffusivity.tech.ps
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/flux_exchange.tech.ps
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/lscale_cond.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/monin_obukhov.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/monin_obukhov.tech.ps
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/my25_turb.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/shallow_conv.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/vert_diff.html
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/vert_diff.tech.ps
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/vert_turb_driver.html
MITgcm-checkpoint68i/pkg/atm_phys/radiation_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/shallow_conv_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/simple_sat_vapor_pres_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/surface_flux_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/vert_diff_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/vert_turb_driver_mod.F90
MITgcm-checkpoint68i/pkg/autodiff/
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_MYFIELDS.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_OPTIONS.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_PARAMS.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_STORE.h
MITgcm-checkpoint68i/pkg/autodiff/ECCO_CPPOPTIONS.h
MITgcm-checkpoint68i/pkg/autodiff/README
MITgcm-checkpoint68i/pkg/autodiff/active_file.F
MITgcm-checkpoint68i/pkg/autodiff/active_file.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_ad.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_control.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_control.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_control_slice.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_g.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen_ad.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen_g.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc_ad.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc_g.F
MITgcm-checkpoint68i/pkg/autodiff/adautodiff_whtapeio_sync.F
MITgcm-checkpoint68i/pkg/autodiff/adcommon.h
MITgcm-checkpoint68i/pkg/autodiff/addamp_adj.F
MITgcm-checkpoint68i/pkg/autodiff/addummy_for_etan.F
MITgcm-checkpoint68i/pkg/autodiff/addummy_in_dynamics.F
MITgcm-checkpoint68i/pkg/autodiff/addummy_in_stepping.F
MITgcm-checkpoint68i/pkg/autodiff/adopen_adclose.F
MITgcm-checkpoint68i/pkg/autodiff/adread_adwrite.F
MITgcm-checkpoint68i/pkg/autodiff/adread_adwrite_i.F
MITgcm-checkpoint68i/pkg/autodiff/adzero_adj.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_ad_diff.list
MITgcm-checkpoint68i/pkg/autodiff/autodiff_check.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_findunit.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode.flow
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set_ad.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set_g.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset_ad.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset_g.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_ini_model_io.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_init_varia.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_readparms.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_restore.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_store.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_whtapeio_sync.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_whtapeio_sync.flow
MITgcm-checkpoint68i/pkg/autodiff/cg2d.flow
MITgcm-checkpoint68i/pkg/autodiff/cg2d_mad.F
MITgcm-checkpoint68i/pkg/autodiff/check_lev1_dir_forcing.h
MITgcm-checkpoint68i/pkg/autodiff/check_lev1_dir_ocephys.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint.flow
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev1_directives.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev1_template.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev2_directives.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev3_directives.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev4_directives.h
MITgcm-checkpoint68i/pkg/autodiff/common.flow
MITgcm-checkpoint68i/pkg/autodiff/copy_ad_uv_outp.F
MITgcm-checkpoint68i/pkg/autodiff/copy_advar_outp.F
MITgcm-checkpoint68i/pkg/autodiff/damp_adj.F
MITgcm-checkpoint68i/pkg/autodiff/damp_adj.flow
MITgcm-checkpoint68i/pkg/autodiff/dummy_for_etan.F
MITgcm-checkpoint68i/pkg/autodiff/dummy_for_etan.flow
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_dynamics.F
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_dynamics.flow
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_stepping.F
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_stepping.flow
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xy.F
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xy_uv.F
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xyz.F
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xyz_uv.F
MITgcm-checkpoint68i/pkg/autodiff/g_common.h
MITgcm-checkpoint68i/pkg/autodiff/g_dummy_for_etan.F
MITgcm-checkpoint68i/pkg/autodiff/g_dummy_in_dynamics.F
MITgcm-checkpoint68i/pkg/autodiff/g_dummy_in_stepping.F
MITgcm-checkpoint68i/pkg/autodiff/global_max_ad.F
MITgcm-checkpoint68i/pkg/autodiff/global_max_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/global_sum_ad.F
MITgcm-checkpoint68i/pkg/autodiff/global_sum_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/global_sum_tile_ad.F
MITgcm-checkpoint68i/pkg/autodiff/initialisation.flow
MITgcm-checkpoint68i/pkg/autodiff/model_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction.F
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction.flow
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction_ad.F
MITgcm-checkpoint68i/pkg/autodiff/system.flow
MITgcm-checkpoint68i/pkg/autodiff/tamc.h
MITgcm-checkpoint68i/pkg/autodiff/zero_adj.F
MITgcm-checkpoint68i/pkg/autodiff/zero_adj.flow
MITgcm-checkpoint68i/pkg/bbl/
MITgcm-checkpoint68i/pkg/bbl/BBL.h
MITgcm-checkpoint68i/pkg/bbl/BBL_OPTIONS.h
MITgcm-checkpoint68i/pkg/bbl/bbl_ad.flow
MITgcm-checkpoint68i/pkg/bbl/bbl_ad_diff.list
MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rho.F
MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rhs.F
MITgcm-checkpoint68i/pkg/bbl/bbl_check.F
MITgcm-checkpoint68i/pkg/bbl/bbl_description.tex
MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_state.F
MITgcm-checkpoint68i/pkg/bbl/bbl_init_fixed.F
MITgcm-checkpoint68i/pkg/bbl/bbl_init_varia.F
MITgcm-checkpoint68i/pkg/bbl/bbl_read_pickup.F
MITgcm-checkpoint68i/pkg/bbl/bbl_readparms.F
MITgcm-checkpoint68i/pkg/bbl/bbl_tendency_apply.F
MITgcm-checkpoint68i/pkg/bbl/bbl_write_pickup.F
MITgcm-checkpoint68i/pkg/bling/
MITgcm-checkpoint68i/pkg/bling/BLING_LOAD.h
MITgcm-checkpoint68i/pkg/bling/BLING_OPTIONS.h
MITgcm-checkpoint68i/pkg/bling/BLING_VARS.h
MITgcm-checkpoint68i/pkg/bling/CHANGES_TO_BLING.txt
MITgcm-checkpoint68i/pkg/bling/bling_ad.flow
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_diff.list
MITgcm-checkpoint68i/pkg/bling/bling_airseaflux.F
MITgcm-checkpoint68i/pkg/bling/bling_bio.F
MITgcm-checkpoint68i/pkg/bling/bling_bio_nitrogen.F
MITgcm-checkpoint68i/pkg/bling/bling_carbon_chem.F
MITgcm-checkpoint68i/pkg/bling/bling_carbonate_init.F
MITgcm-checkpoint68i/pkg/bling/bling_carbonate_sys.F
MITgcm-checkpoint68i/pkg/bling/bling_description.txt
MITgcm-checkpoint68i/pkg/bling/bling_diagnostics_init.F
MITgcm-checkpoint68i/pkg/bling/bling_fields_load.F
MITgcm-checkpoint68i/pkg/bling/bling_ini_forcing.F
MITgcm-checkpoint68i/pkg/bling/bling_init_fixed.F
MITgcm-checkpoint68i/pkg/bling/bling_init_varia.F
MITgcm-checkpoint68i/pkg/bling/bling_light.F
MITgcm-checkpoint68i/pkg/bling/bling_main.F
MITgcm-checkpoint68i/pkg/bling/bling_min_val.F
MITgcm-checkpoint68i/pkg/bling/bling_mixedlayer.F
MITgcm-checkpoint68i/pkg/bling/bling_read_pickup.F
MITgcm-checkpoint68i/pkg/bling/bling_readparms.F
MITgcm-checkpoint68i/pkg/bling/bling_sgs.F
MITgcm-checkpoint68i/pkg/bling/bling_solvesaphe.F
MITgcm-checkpoint68i/pkg/bling/bling_tr_register.F
MITgcm-checkpoint68i/pkg/bling/bling_write_pickup.F
MITgcm-checkpoint68i/pkg/bulk_force/
MITgcm-checkpoint68i/pkg/bulk_force/BULKF.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_CONSERV.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_INT.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_PARAMS.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_TAVE.h
MITgcm-checkpoint68i/pkg/bulk_force/BULK_FORCE_OPTIONS.h
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_ave.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_fields_load.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_flux_adjust.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_forcing.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_aim.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lanl.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lay.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_init_varia.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_output.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_readparms.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_sh2rh_aim.F
MITgcm-checkpoint68i/pkg/cal/
MITgcm-checkpoint68i/pkg/cal/CAL_OPTIONS.h
MITgcm-checkpoint68i/pkg/cal/cal.h
MITgcm-checkpoint68i/pkg/cal/cal_ad_diff.list
MITgcm-checkpoint68i/pkg/cal/cal_addtime.F
MITgcm-checkpoint68i/pkg/cal/cal_checkdate.F
MITgcm-checkpoint68i/pkg/cal/cal_compdates.F
MITgcm-checkpoint68i/pkg/cal/cal_convdate.F
MITgcm-checkpoint68i/pkg/cal/cal_copydate.F
MITgcm-checkpoint68i/pkg/cal/cal_daysformonth.F
MITgcm-checkpoint68i/pkg/cal/cal_dayspermonth.F
MITgcm-checkpoint68i/pkg/cal/cal_description.tex
MITgcm-checkpoint68i/pkg/cal/cal_fulldate.F
MITgcm-checkpoint68i/pkg/cal/cal_getdate.F
MITgcm-checkpoint68i/pkg/cal/cal_getmonthsrec.F
MITgcm-checkpoint68i/pkg/cal/cal_init_fixed.F
MITgcm-checkpoint68i/pkg/cal/cal_intdays.F
MITgcm-checkpoint68i/pkg/cal/cal_intmonths.F
MITgcm-checkpoint68i/pkg/cal/cal_intyears.F
MITgcm-checkpoint68i/pkg/cal/cal_isleap.F
MITgcm-checkpoint68i/pkg/cal/cal_monthsforyear.F
MITgcm-checkpoint68i/pkg/cal/cal_monthsperyear.F
MITgcm-checkpoint68i/pkg/cal/cal_numints.F
MITgcm-checkpoint68i/pkg/cal/cal_printdate.F
MITgcm-checkpoint68i/pkg/cal/cal_printerror.F
MITgcm-checkpoint68i/pkg/cal/cal_readparms.F
MITgcm-checkpoint68i/pkg/cal/cal_set.F
MITgcm-checkpoint68i/pkg/cal/cal_stepsforday.F
MITgcm-checkpoint68i/pkg/cal/cal_stepsperday.F
MITgcm-checkpoint68i/pkg/cal/cal_subdates.F
MITgcm-checkpoint68i/pkg/cal/cal_summary.F
MITgcm-checkpoint68i/pkg/cal/cal_time2dump.F
MITgcm-checkpoint68i/pkg/cal/cal_timeinterval.F
MITgcm-checkpoint68i/pkg/cal/cal_timepassed.F
MITgcm-checkpoint68i/pkg/cal/cal_timestamp.F
MITgcm-checkpoint68i/pkg/cal/cal_toseconds.F
MITgcm-checkpoint68i/pkg/cal/cal_weekday.F
MITgcm-checkpoint68i/pkg/cd_code/
MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_OPTIONS.h
MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_VARS.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad.flow
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_diff.list
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ini_vars.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_init_fixed.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_read_pickup.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_scheme.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_write_pickup.F
MITgcm-checkpoint68i/pkg/cfc/
MITgcm-checkpoint68i/pkg/cfc/CFC.h
MITgcm-checkpoint68i/pkg/cfc/CFC_ATMOS.h
MITgcm-checkpoint68i/pkg/cfc/CFC_SIZE.h
MITgcm-checkpoint68i/pkg/cfc/cfc11_forcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc11_surfforcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc12_forcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc12_surfforcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_diff.list
MITgcm-checkpoint68i/pkg/cfc/cfc_atmos.F
MITgcm-checkpoint68i/pkg/cfc/cfc_check.F
MITgcm-checkpoint68i/pkg/cfc/cfc_fields_load.F
MITgcm-checkpoint68i/pkg/cfc/cfc_param.F
MITgcm-checkpoint68i/pkg/cfc/cfc_readparms.F
MITgcm-checkpoint68i/pkg/cfc/cfc_tr_register.F
MITgcm-checkpoint68i/pkg/cheapaml/
MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML.h
MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML_OPTIONS.h
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_calc_rhs.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_coare3_flux.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_copy_edges.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_diagnostics_init.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_fields_load.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_fixed.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_varia.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_lanl_flux.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_read_pickup.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_readparms.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_seaice.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_timestep.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_write_pickup.F
MITgcm-checkpoint68i/pkg/chronos/
MITgcm-checkpoint68i/pkg/chronos/chronos.F
MITgcm-checkpoint68i/pkg/chronos/chronos.h
MITgcm-checkpoint68i/pkg/compon_communic/
MITgcm-checkpoint68i/pkg/compon_communic/CPLR_SIG.h
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/generate_tag.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_init.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_tile_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_init.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_tile_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_all_check.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2dbl.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2int.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2real.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_dbl2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init1.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2a.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2b.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_initcomp.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_int2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_match_comp.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_real2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_sortranks.F
MITgcm-checkpoint68i/pkg/cost/
MITgcm-checkpoint68i/pkg/cost/COST_OPTIONS.h
MITgcm-checkpoint68i/pkg/cost/adcost.h
MITgcm-checkpoint68i/pkg/cost/cost.h
MITgcm-checkpoint68i/pkg/cost/cost_accumulate_mean.F
MITgcm-checkpoint68i/pkg/cost/cost_ad.flow
MITgcm-checkpoint68i/pkg/cost/cost_ad_diff.list
MITgcm-checkpoint68i/pkg/cost/cost_atlantic_heat.F
MITgcm-checkpoint68i/pkg/cost/cost_check.F
MITgcm-checkpoint68i/pkg/cost/cost_dependent_init.F
MITgcm-checkpoint68i/pkg/cost/cost_depth.F
MITgcm-checkpoint68i/pkg/cost/cost_final.F
MITgcm-checkpoint68i/pkg/cost/cost_final_restore.F
MITgcm-checkpoint68i/pkg/cost/cost_final_store.F
MITgcm-checkpoint68i/pkg/cost/cost_init_varia.F
MITgcm-checkpoint68i/pkg/cost/cost_readparms.F
MITgcm-checkpoint68i/pkg/cost/cost_state_final.F
MITgcm-checkpoint68i/pkg/cost/cost_test.F
MITgcm-checkpoint68i/pkg/cost/cost_tile.F
MITgcm-checkpoint68i/pkg/cost/cost_tracer.F
MITgcm-checkpoint68i/pkg/cost/cost_vector.F
MITgcm-checkpoint68i/pkg/cost/g_cost.h
MITgcm-checkpoint68i/pkg/ctrl/
MITgcm-checkpoint68i/pkg/ctrl/CTRL_FIELDS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_GENARR.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_OBCS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_OPTIONS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_SIZE.h
MITgcm-checkpoint68i/pkg/ctrl/adctrl_bound.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_diff.list
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.flow
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound_tl.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_check.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_driver.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_depth_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_description.tex
MITgcm-checkpoint68i/pkg/ctrl/ctrl_dummy.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen_rec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_mask.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcse.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsn.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcss.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsw.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getrec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_hfacc_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_ctrlvar.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_obcs_variables.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_rec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_variables.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_wet.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_local_params.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_forcing.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_genarr.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_gentim2d.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_ecco.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_genarr.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gentim2d.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_pack.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_readparms.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_fname.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_smooth.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_summary.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_swapffields.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_toolbox.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_unpack.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_weights.h
MITgcm-checkpoint68i/pkg/ctrl/optim.h
MITgcm-checkpoint68i/pkg/ctrl/optim_readparms.F
MITgcm-checkpoint68i/pkg/debug/
MITgcm-checkpoint68i/pkg/debug/DEBUG_OPTIONS.h
MITgcm-checkpoint68i/pkg/debug/chksum_tiled.F
MITgcm-checkpoint68i/pkg/debug/debug_ad.flow
MITgcm-checkpoint68i/pkg/debug/debug_call.F
MITgcm-checkpoint68i/pkg/debug/debug_cs_corner_uv.F
MITgcm-checkpoint68i/pkg/debug/debug_enter.F
MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rl.F
MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rs.F
MITgcm-checkpoint68i/pkg/debug/debug_leave.F
MITgcm-checkpoint68i/pkg/debug/debug_msg.F
MITgcm-checkpoint68i/pkg/debug/debug_stats_rl.F
MITgcm-checkpoint68i/pkg/debug/debug_stats_rs.F
MITgcm-checkpoint68i/pkg/debug/fill_in_corners_rl.F
MITgcm-checkpoint68i/pkg/debug/write_fullarray_rl.F
MITgcm-checkpoint68i/pkg/debug/write_fullarray_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_CALC.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGSTATS_REGIONS.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAG_OPTIONS.h
MITgcm-checkpoint68i/pkg/diagnostics/diag_calc_psivel.F
MITgcm-checkpoint68i/pkg/diagnostics/diag_cg2d.F
MITgcm-checkpoint68i/pkg/diagnostics/diag_vegtile_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad.flow
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad_diff.list
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_addtolist.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_calc_phivel.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_check.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_clear.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_field.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_state.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fract_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ini_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_early.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_fixed.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_varia.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_p2p.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_vert.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_is_on.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_list_check.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_main_init.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_mnc_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_read_pickup.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_readparms.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_levels.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_pointers.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_setdiag.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_status_error.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_sum_levels.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_summary.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_switch_onoff.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_utils.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_adj.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_pickup.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ascii_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_clear.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_close_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_global.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ini_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_local.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_mnc_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_others_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_output.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_pointers.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_regions.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_setdiag.F
MITgcm-checkpoint68i/pkg/dic/
MITgcm-checkpoint68i/pkg/dic/DIC_ATMOS.h
MITgcm-checkpoint68i/pkg/dic/DIC_COST.h
MITgcm-checkpoint68i/pkg/dic/DIC_CTRL.h
MITgcm-checkpoint68i/pkg/dic/DIC_LOAD.h
MITgcm-checkpoint68i/pkg/dic/DIC_OPTIONS.h
MITgcm-checkpoint68i/pkg/dic/DIC_VARS.h
MITgcm-checkpoint68i/pkg/dic/alk_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/bio_export.F
MITgcm-checkpoint68i/pkg/dic/calcite_saturation.F
MITgcm-checkpoint68i/pkg/dic/car_flux.F
MITgcm-checkpoint68i/pkg/dic/car_flux_omega_top.F
MITgcm-checkpoint68i/pkg/dic/carbon_chem.F
MITgcm-checkpoint68i/pkg/dic/dic_ad.flow
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_diff.list
MITgcm-checkpoint68i/pkg/dic/dic_atmos.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_diags.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_forcing.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_init.F
MITgcm-checkpoint68i/pkg/dic/dic_cost.F
MITgcm-checkpoint68i/pkg/dic/dic_diagnostics_init.F
MITgcm-checkpoint68i/pkg/dic/dic_fields_load.F
MITgcm-checkpoint68i/pkg/dic/dic_fields_update.F
MITgcm-checkpoint68i/pkg/dic/dic_ini_atmos.F
MITgcm-checkpoint68i/pkg/dic/dic_ini_forcing.F
MITgcm-checkpoint68i/pkg/dic/dic_init_fixed.F
MITgcm-checkpoint68i/pkg/dic/dic_init_varia.F
MITgcm-checkpoint68i/pkg/dic/dic_mnc_init.F
MITgcm-checkpoint68i/pkg/dic/dic_read_co2_pickup.F
MITgcm-checkpoint68i/pkg/dic/dic_read_pickup.F
MITgcm-checkpoint68i/pkg/dic/dic_readparms.F
MITgcm-checkpoint68i/pkg/dic/dic_set_control.F
MITgcm-checkpoint68i/pkg/dic/dic_solvesaphe.F
MITgcm-checkpoint68i/pkg/dic/dic_store_fluxco2.F
MITgcm-checkpoint68i/pkg/dic/dic_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/dic_surfforcing_init.F
MITgcm-checkpoint68i/pkg/dic/dic_tr_register.F
MITgcm-checkpoint68i/pkg/dic/dic_write_pickup.F
MITgcm-checkpoint68i/pkg/dic/fe_chem.F
MITgcm-checkpoint68i/pkg/dic/insol.F
MITgcm-checkpoint68i/pkg/dic/o2_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/phos_flux.F
MITgcm-checkpoint68i/pkg/down_slope/
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_OPTIONS.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_PARAMS.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_SIZE.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_VARS.h
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_ad_diff.list
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_apply.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_flow.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_rho.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_diagnostics_init.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_fixed.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_varia.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_readparms.F
MITgcm-checkpoint68i/pkg/ebm/
MITgcm-checkpoint68i/pkg/ebm/EBM.h
MITgcm-checkpoint68i/pkg/ebm/EBM_OPTIONS.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_diff.list
MITgcm-checkpoint68i/pkg/ebm/ebm_area_t.F
MITgcm-checkpoint68i/pkg/ebm/ebm_atmosphere.F
MITgcm-checkpoint68i/pkg/ebm/ebm_driver.F
MITgcm-checkpoint68i/pkg/ebm/ebm_ini_vars.F
MITgcm-checkpoint68i/pkg/ebm/ebm_load_climatology.F
MITgcm-checkpoint68i/pkg/ebm/ebm_readparms.F
MITgcm-checkpoint68i/pkg/ebm/ebm_wind_perturb.F
MITgcm-checkpoint68i/pkg/ebm/ebm_zonalmean.F
MITgcm-checkpoint68i/pkg/ecco/
MITgcm-checkpoint68i/pkg/ecco/ECCO.h
MITgcm-checkpoint68i/pkg/ecco/ECCO_OPTIONS.h
MITgcm-checkpoint68i/pkg/ecco/ECCO_SIZE.h
MITgcm-checkpoint68i/pkg/ecco/cost_averagesfields.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesflags.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesgeneric.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesinit.F
MITgcm-checkpoint68i/pkg/ecco/cost_bp_read.F
MITgcm-checkpoint68i/pkg/ecco/cost_forcing.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencal.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_all.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_assignperiod.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_boxmean.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_bpv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_customize.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_glbmean.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_moc.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_seaicev4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sshv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sstv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_transp.F
MITgcm-checkpoint68i/pkg/ecco/cost_generic.F
MITgcm-checkpoint68i/pkg/ecco/cost_genread.F
MITgcm-checkpoint68i/pkg/ecco/cost_hyd.F
MITgcm-checkpoint68i/pkg/ecco/cost_internal_params.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcs.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcs_ageos.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcse.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsn.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcss.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsvol.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsw.F
MITgcm-checkpoint68i/pkg/ecco/cost_sla_read.F
MITgcm-checkpoint68i/pkg/ecco/cost_sla_read_yd.F
MITgcm-checkpoint68i/pkg/ecco/cost_ssh.F
MITgcm-checkpoint68i/pkg/ecco/ecco_ad.flow
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_diff.list
MITgcm-checkpoint68i/pkg/ecco/ecco_check.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost.h
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_driver.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_final.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_barfiles.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_fixed.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_varia.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_summary.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_weights.F
MITgcm-checkpoint68i/pkg/ecco/ecco_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ecco/ecco_init_fixed.F
MITgcm-checkpoint68i/pkg/ecco/ecco_init_varia.F
MITgcm-checkpoint68i/pkg/ecco/ecco_local_params.h
MITgcm-checkpoint68i/pkg/ecco/ecco_phys.F
MITgcm-checkpoint68i/pkg/ecco/ecco_readparms.F
MITgcm-checkpoint68i/pkg/ecco/ecco_summary.F
MITgcm-checkpoint68i/pkg/ecco/ecco_toolbox.F
MITgcm-checkpoint68i/pkg/ecco/stergloh_output.F
MITgcm-checkpoint68i/pkg/embed_files/
MITgcm-checkpoint68i/pkg/embed_files/EMBED_FILES_OPTIONS.h
MITgcm-checkpoint68i/pkg/embed_files/README.txt
MITgcm-checkpoint68i/pkg/embed_files/decode_files.c
MITgcm-checkpoint68i/pkg/embed_files/embed_files_init.F
MITgcm-checkpoint68i/pkg/exch2/
MITgcm-checkpoint68i/pkg/exch2/Makefile
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_BUFFER.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_PARAMS.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_SIZE.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_TOPOLOGY.h
MITgcm-checkpoint68i/pkg/exch2/W2_OPTIONS.h
MITgcm-checkpoint68i/pkg/exch2/exch2.flow
MITgcm-checkpoint68i/pkg/exch2/exch2_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_diff.list
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_check_depths.F
MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_get_scal_bounds.F
MITgcm-checkpoint68i/pkg/exch2/exch2_get_uv_bounds.F
MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube_ad.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube_ad.template
MITgcm-checkpoint68i/pkg/exch2/exch2_s3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_sm_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_agrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_bgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_cgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_dgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_z_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/w2_cumulsum_z_tile.F
MITgcm-checkpoint68i/pkg/exch2/w2_e2setup.F
MITgcm-checkpoint68i/pkg/exch2/w2_eeboot.F
MITgcm-checkpoint68i/pkg/exch2/w2_map_procs.F
MITgcm-checkpoint68i/pkg/exch2/w2_print_comm_sequence.F
MITgcm-checkpoint68i/pkg/exch2/w2_print_e2setup.F
MITgcm-checkpoint68i/pkg/exch2/w2_readparms.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_cs6_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_f2f_index.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_gen_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_map_cumsum.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_map_tiles.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_myown_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_single_facet.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_tile2tiles.F
MITgcm-checkpoint68i/pkg/exf/
MITgcm-checkpoint68i/pkg/exf/EXF_CONSTANTS.h
MITgcm-checkpoint68i/pkg/exf/EXF_FIELDS.h
MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_PARAM.h
MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_SIZE.h
MITgcm-checkpoint68i/pkg/exf/EXF_OPTIONS.h
MITgcm-checkpoint68i/pkg/exf/EXF_PARAM.h
MITgcm-checkpoint68i/pkg/exf/TODO.txt
MITgcm-checkpoint68i/pkg/exf/exf_ad.flow
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_diff.list
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots.F
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots__g.F
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots_ad.F
MITgcm-checkpoint68i/pkg/exf/exf_bulkformulae.F
MITgcm-checkpoint68i/pkg/exf/exf_check.F
MITgcm-checkpoint68i/pkg/exf/exf_check_range.F
MITgcm-checkpoint68i/pkg/exf/exf_description.tex
MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_init.F
MITgcm-checkpoint68i/pkg/exf/exf_filter_rl.F
MITgcm-checkpoint68i/pkg/exf/exf_getclim.F
MITgcm-checkpoint68i/pkg/exf/exf_getffield_start.F
MITgcm-checkpoint68i/pkg/exf/exf_getffieldrec.F
MITgcm-checkpoint68i/pkg/exf/exf_getffields.F
MITgcm-checkpoint68i/pkg/exf/exf_getfield_start.F
MITgcm-checkpoint68i/pkg/exf/exf_getforcing.F
MITgcm-checkpoint68i/pkg/exf/exf_getmonthsrec.F
MITgcm-checkpoint68i/pkg/exf/exf_getsurfacefluxes.F
MITgcm-checkpoint68i/pkg/exf/exf_getyearlyfieldname.F
MITgcm-checkpoint68i/pkg/exf/exf_init_fixed.F
MITgcm-checkpoint68i/pkg/exf/exf_init_fld.F
MITgcm-checkpoint68i/pkg/exf/exf_init_interp.F
MITgcm-checkpoint68i/pkg/exf/exf_init_varia.F
MITgcm-checkpoint68i/pkg/exf/exf_interp.F
MITgcm-checkpoint68i/pkg/exf/exf_interp_read.F
MITgcm-checkpoint68i/pkg/exf/exf_interp_uv.F
MITgcm-checkpoint68i/pkg/exf/exf_interpolate.F
MITgcm-checkpoint68i/pkg/exf/exf_mapfields.F
MITgcm-checkpoint68i/pkg/exf/exf_monitor.F
MITgcm-checkpoint68i/pkg/exf/exf_monitor_ad.F
MITgcm-checkpoint68i/pkg/exf/exf_radiation.F
MITgcm-checkpoint68i/pkg/exf/exf_readparms.F
MITgcm-checkpoint68i/pkg/exf/exf_set_fld.F
MITgcm-checkpoint68i/pkg/exf/exf_set_gen.F
MITgcm-checkpoint68i/pkg/exf/exf_set_obcs.F
MITgcm-checkpoint68i/pkg/exf/exf_set_uv.F
MITgcm-checkpoint68i/pkg/exf/exf_summary.F
MITgcm-checkpoint68i/pkg/exf/exf_swapffields.F
MITgcm-checkpoint68i/pkg/exf/exf_weight_sfx_diags.F
MITgcm-checkpoint68i/pkg/exf/exf_wind.F
MITgcm-checkpoint68i/pkg/exf/exf_zenithangle.F
MITgcm-checkpoint68i/pkg/exf/exf_zenithangle_table.F
MITgcm-checkpoint68i/pkg/fizhi/
MITgcm-checkpoint68i/pkg/fizhi/AtoC.F
MITgcm-checkpoint68i/pkg/fizhi/CtoA.F
MITgcm-checkpoint68i/pkg/fizhi/FIZHI_OPTIONS.h
MITgcm-checkpoint68i/pkg/fizhi/cah-dat.h
MITgcm-checkpoint68i/pkg/fizhi/cai-dat.h
MITgcm-checkpoint68i/pkg/fizhi/chronos.h
MITgcm-checkpoint68i/pkg/fizhi/co2-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/do_fizhi.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_SHP.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_SIZE.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_alarms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_chemistry_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_clockstuff.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagalarms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagnostics_init.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_driver.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_earth_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_fillnegs.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_gwdrag.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_chem.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_fixed.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vars.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_veg.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vegsurftiles.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_io_comms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_SIZE.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_lsm.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_lwrad.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_mnc_init.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_moist.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_mpistuff.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_ocean_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_rayleigh.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_read_pickup.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_readparms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_readwrite_vegtiles.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_step_diag.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_swrad.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_tendency_apply.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_turb.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_update_time.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_utils.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_wrapper.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_datetime.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_pickup.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_state.F
MITgcm-checkpoint68i/pkg/fizhi/getcon.F
MITgcm-checkpoint68i/pkg/fizhi/getpwhere.F
MITgcm-checkpoint68i/pkg/fizhi/h2o-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/o3-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/sibber.h
MITgcm-checkpoint68i/pkg/fizhi/slprs.F
MITgcm-checkpoint68i/pkg/fizhi/snwmid.h
MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_corr.F
MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_fg.F
MITgcm-checkpoint68i/pkg/fizhi/step_physics.F
MITgcm-checkpoint68i/pkg/fizhi/update_chemistry_exports.F
MITgcm-checkpoint68i/pkg/fizhi/update_earth_exports.F
MITgcm-checkpoint68i/pkg/fizhi/update_ocean_exports.F
MITgcm-checkpoint68i/pkg/flt/
MITgcm-checkpoint68i/pkg/flt/FLT.h
MITgcm-checkpoint68i/pkg/flt/FLT_BUFF.h
MITgcm-checkpoint68i/pkg/flt/FLT_OPTIONS.h
MITgcm-checkpoint68i/pkg/flt/FLT_SIZE.h
MITgcm-checkpoint68i/pkg/flt/README.flt
MITgcm-checkpoint68i/pkg/flt/exch2_recv_get_vec.F
MITgcm-checkpoint68i/pkg/flt/exch2_send_put_vec.F
MITgcm-checkpoint68i/pkg/flt/exch_recv_get_vec.F
MITgcm-checkpoint68i/pkg/flt/exch_send_put_vec.F
MITgcm-checkpoint68i/pkg/flt/flt_down.F
MITgcm-checkpoint68i/pkg/flt/flt_exch2.F
MITgcm-checkpoint68i/pkg/flt/flt_exchg.F
MITgcm-checkpoint68i/pkg/flt/flt_init_fixed.F
MITgcm-checkpoint68i/pkg/flt/flt_init_varia.F
MITgcm-checkpoint68i/pkg/flt/flt_interp_linear.F
MITgcm-checkpoint68i/pkg/flt/flt_main.F
MITgcm-checkpoint68i/pkg/flt/flt_mapping.F
MITgcm-checkpoint68i/pkg/flt/flt_readparms.F
MITgcm-checkpoint68i/pkg/flt/flt_runga2.F
MITgcm-checkpoint68i/pkg/flt/flt_runga4.F
MITgcm-checkpoint68i/pkg/flt/flt_traj.F
MITgcm-checkpoint68i/pkg/flt/flt_up.F
MITgcm-checkpoint68i/pkg/flt/flt_write_pickup.F
MITgcm-checkpoint68i/pkg/frazil/
MITgcm-checkpoint68i/pkg/frazil/FRAZIL.h
MITgcm-checkpoint68i/pkg/frazil/FRAZIL_OPTIONS.h
MITgcm-checkpoint68i/pkg/frazil/frazil_ad.flow
MITgcm-checkpoint68i/pkg/frazil/frazil_ad_diff.list
MITgcm-checkpoint68i/pkg/frazil/frazil_calc_rhs.F
MITgcm-checkpoint68i/pkg/frazil/frazil_description.tex
MITgcm-checkpoint68i/pkg/frazil/frazil_diagnostics_init.F
MITgcm-checkpoint68i/pkg/frazil/frazil_init_fixed.F
MITgcm-checkpoint68i/pkg/frazil/frazil_init_varia.F
MITgcm-checkpoint68i/pkg/frazil/frazil_tendency_apply.F
MITgcm-checkpoint68i/pkg/gchem/
MITgcm-checkpoint68i/pkg/gchem/GCHEM.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_FIELDS.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_OPTIONS.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_SIZE.h
MITgcm-checkpoint68i/pkg/gchem/gchem_ad_diff.list
MITgcm-checkpoint68i/pkg/gchem/gchem_add_tendency.F
MITgcm-checkpoint68i/pkg/gchem/gchem_calc_tendency.F
MITgcm-checkpoint68i/pkg/gchem/gchem_check.F
MITgcm-checkpoint68i/pkg/gchem/gchem_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gchem/gchem_fields_load.F
MITgcm-checkpoint68i/pkg/gchem/gchem_forcing_sep.F
MITgcm-checkpoint68i/pkg/gchem/gchem_init_fixed.F
MITgcm-checkpoint68i/pkg/gchem/gchem_init_vari.F
MITgcm-checkpoint68i/pkg/gchem/gchem_output.F
MITgcm-checkpoint68i/pkg/gchem/gchem_readparms.F
MITgcm-checkpoint68i/pkg/gchem/gchem_surfmean.F
MITgcm-checkpoint68i/pkg/gchem/gchem_tr_register.F
MITgcm-checkpoint68i/pkg/gchem/gchem_write_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_FLUX_LIMITER.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_OPTIONS.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_SOM_VARS.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_diff.list
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advection.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advscheme.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_calc_rhs.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_check.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_del2.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_init.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_state.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_exch_som.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_implicit_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_fixed.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_varia.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_plm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_read_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_advect.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_exchanges.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_fill_cs_corner.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_lim_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_prep_cs_corner.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3c4_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_write_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/generic_advdiff.tex
MITgcm-checkpoint68i/pkg/generic_advdiff/salt_fill.F
MITgcm-checkpoint68i/pkg/ggl90/
MITgcm-checkpoint68i/pkg/ggl90/GGL90.h
MITgcm-checkpoint68i/pkg/ggl90/GGL90_OPTIONS.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_diff.list
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_diff.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_visc.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_check.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_exchanges.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_idemix.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_fixed.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_varia.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_output.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_read_pickup.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_readparms.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_write_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/
MITgcm-checkpoint68i/pkg/gmredi/GMREDI.h
MITgcm-checkpoint68i/pkg/gmredi/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/pkg/gmredi/GMREDI_TAVE.h
MITgcm-checkpoint68i/pkg/gmredi/README_ADJOINT
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad.flow
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad_diff.list
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_bates_k.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_diff.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_eigs.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_b.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_bvp.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_qgleith.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_tensor.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_urms.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_check.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_description.tex
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_impl.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_do_exch.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_fixed.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_varia.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_mnc_init.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_output.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_read_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_readparms.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_residual_flow.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_rtransport.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_limit.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_psi.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_write_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_xtransport.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ytransport.F
MITgcm-checkpoint68i/pkg/gmredi/submeso_calc_psi.F
MITgcm-checkpoint68i/pkg/grdchk/
MITgcm-checkpoint68i/pkg/grdchk/GRDCHK_OPTIONS.h
MITgcm-checkpoint68i/pkg/grdchk/grdchk.h
MITgcm-checkpoint68i/pkg/grdchk/grdchk_check.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_description.tex
MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_obcs_mask.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_position.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_getadxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_getxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_init.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_loc.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_main.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_print.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_readparms.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_setxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_summary.F
MITgcm-checkpoint68i/pkg/gridalt/
MITgcm-checkpoint68i/pkg/gridalt/GRIDALT_OPTIONS.h
MITgcm-checkpoint68i/pkg/gridalt/dyn2phys.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_initialise.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_mapping.h
MITgcm-checkpoint68i/pkg/gridalt/gridalt_update.F
MITgcm-checkpoint68i/pkg/gridalt/make_phys_grid.F
MITgcm-checkpoint68i/pkg/gridalt/phys2dyn.F
MITgcm-checkpoint68i/pkg/icefront/
MITgcm-checkpoint68i/pkg/icefront/ICEFRONT.h
MITgcm-checkpoint68i/pkg/icefront/ICEFRONT_OPTIONS.h
MITgcm-checkpoint68i/pkg/icefront/ICFSymbol.txt
MITgcm-checkpoint68i/pkg/icefront/icefront_check.F
MITgcm-checkpoint68i/pkg/icefront/icefront_description.tex
MITgcm-checkpoint68i/pkg/icefront/icefront_diagnostics_init.F
MITgcm-checkpoint68i/pkg/icefront/icefront_init_fixed.F
MITgcm-checkpoint68i/pkg/icefront/icefront_init_varia.F
MITgcm-checkpoint68i/pkg/icefront/icefront_readparms.F
MITgcm-checkpoint68i/pkg/icefront/icefront_tendency_apply.F
MITgcm-checkpoint68i/pkg/icefront/icefront_thermodynamics.F
MITgcm-checkpoint68i/pkg/kl10/
MITgcm-checkpoint68i/pkg/kl10/KL10.h
MITgcm-checkpoint68i/pkg/kl10/KL10_DIAGS.h
MITgcm-checkpoint68i/pkg/kl10/KL10_OPTIONS.h
MITgcm-checkpoint68i/pkg/kl10/KL10_TAVE.h
MITgcm-checkpoint68i/pkg/kl10/kl10_calc.F
MITgcm-checkpoint68i/pkg/kl10/kl10_calc_diff.F
MITgcm-checkpoint68i/pkg/kl10/kl10_calc_visc.F
MITgcm-checkpoint68i/pkg/kl10/kl10_check.F
MITgcm-checkpoint68i/pkg/kl10/kl10_diagnostics_init.F
MITgcm-checkpoint68i/pkg/kl10/kl10_init_fixed.F
MITgcm-checkpoint68i/pkg/kl10/kl10_init_varia.F
MITgcm-checkpoint68i/pkg/kl10/kl10_output.F
MITgcm-checkpoint68i/pkg/kl10/kl10_readparms.F
MITgcm-checkpoint68i/pkg/kpp/
MITgcm-checkpoint68i/pkg/kpp/KPP.h
MITgcm-checkpoint68i/pkg/kpp/KPP_OPTIONS.h
MITgcm-checkpoint68i/pkg/kpp/KPP_PARAMS.h
MITgcm-checkpoint68i/pkg/kpp/KPP_TAVE.h
MITgcm-checkpoint68i/pkg/kpp/kpp_ad_diff.list
MITgcm-checkpoint68i/pkg/kpp/kpp_calc.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_ptr.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_s.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_t.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_visc.F
MITgcm-checkpoint68i/pkg/kpp/kpp_check.F
MITgcm-checkpoint68i/pkg/kpp/kpp_description.tex
MITgcm-checkpoint68i/pkg/kpp/kpp_diagnostics_init.F
MITgcm-checkpoint68i/pkg/kpp/kpp_do_exch.F
MITgcm-checkpoint68i/pkg/kpp/kpp_forcing_surf.F
MITgcm-checkpoint68i/pkg/kpp/kpp_init_fixed.F
MITgcm-checkpoint68i/pkg/kpp/kpp_init_varia.F
MITgcm-checkpoint68i/pkg/kpp/kpp_output.F
MITgcm-checkpoint68i/pkg/kpp/kpp_readparms.F
MITgcm-checkpoint68i/pkg/kpp/kpp_routines.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_ptr.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_s.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_t.F
MITgcm-checkpoint68i/pkg/land/
MITgcm-checkpoint68i/pkg/land/LAND_OPTIONS.h
MITgcm-checkpoint68i/pkg/land/LAND_PARAMS.h
MITgcm-checkpoint68i/pkg/land/LAND_SIZE.h
MITgcm-checkpoint68i/pkg/land/LAND_TAVE.h
MITgcm-checkpoint68i/pkg/land/LAND_VARS.h
MITgcm-checkpoint68i/pkg/land/land_albedo.F
MITgcm-checkpoint68i/pkg/land/land_check.F
MITgcm-checkpoint68i/pkg/land/land_diagnostics_init.F
MITgcm-checkpoint68i/pkg/land/land_diagnostics_state.F
MITgcm-checkpoint68i/pkg/land/land_do_diags.F
MITgcm-checkpoint68i/pkg/land/land_impl_temp.F
MITgcm-checkpoint68i/pkg/land/land_ini_vars.F
MITgcm-checkpoint68i/pkg/land/land_init_fixed.F
MITgcm-checkpoint68i/pkg/land/land_mnc_init.F
MITgcm-checkpoint68i/pkg/land/land_monitor.F
MITgcm-checkpoint68i/pkg/land/land_output.F
MITgcm-checkpoint68i/pkg/land/land_read_pickup.F
MITgcm-checkpoint68i/pkg/land/land_readparms.F
MITgcm-checkpoint68i/pkg/land/land_stepfwd.F
MITgcm-checkpoint68i/pkg/land/land_write_pickup.F
MITgcm-checkpoint68i/pkg/layers/
MITgcm-checkpoint68i/pkg/layers/LAYERS.h
MITgcm-checkpoint68i/pkg/layers/LAYERS_OPTIONS.h
MITgcm-checkpoint68i/pkg/layers/LAYERS_SIZE.h
MITgcm-checkpoint68i/pkg/layers/layers_ad_diff.list
MITgcm-checkpoint68i/pkg/layers/layers_calc.F
MITgcm-checkpoint68i/pkg/layers/layers_check.F
MITgcm-checkpoint68i/pkg/layers/layers_diagnostics_init.F
MITgcm-checkpoint68i/pkg/layers/layers_fluxcalc.F
MITgcm-checkpoint68i/pkg/layers/layers_init_fixed.F
MITgcm-checkpoint68i/pkg/layers/layers_init_varia.F
MITgcm-checkpoint68i/pkg/layers/layers_mnc_init.F
MITgcm-checkpoint68i/pkg/layers/layers_output.F
MITgcm-checkpoint68i/pkg/layers/layers_readparms.F
MITgcm-checkpoint68i/pkg/layers/layers_save.F
MITgcm-checkpoint68i/pkg/layers/layers_thermodynamics.F
MITgcm-checkpoint68i/pkg/layers/layers_wsurf_tr.F
MITgcm-checkpoint68i/pkg/longstep/
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP.h
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_OPTIONS.h
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_PARAMS.h
MITgcm-checkpoint68i/pkg/longstep/README
MITgcm-checkpoint68i/pkg/longstep/longstep_average.F
MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d_fac.F
MITgcm-checkpoint68i/pkg/longstep/longstep_check_iters.F
MITgcm-checkpoint68i/pkg/longstep/longstep_correction_step.F
MITgcm-checkpoint68i/pkg/longstep/longstep_diagnostics_init.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_fac.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_rs.F
MITgcm-checkpoint68i/pkg/longstep/longstep_forcing_surf.F
MITgcm-checkpoint68i/pkg/longstep/longstep_init_fixed.F
MITgcm-checkpoint68i/pkg/longstep/longstep_init_varia.F
MITgcm-checkpoint68i/pkg/longstep/longstep_readparms.F
MITgcm-checkpoint68i/pkg/longstep/longstep_reset_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_thermodynamics.F
MITgcm-checkpoint68i/pkg/matrix/
MITgcm-checkpoint68i/pkg/matrix/MATRIX.h
MITgcm-checkpoint68i/pkg/matrix/MATRIX_OPTIONS.h
MITgcm-checkpoint68i/pkg/matrix/matrix_init_varia.F
MITgcm-checkpoint68i/pkg/matrix/matrix_output.F
MITgcm-checkpoint68i/pkg/matrix/matrix_readparms.F
MITgcm-checkpoint68i/pkg/matrix/matrix_store_tendency.F
MITgcm-checkpoint68i/pkg/matrix/matrix_write_grid.F
MITgcm-checkpoint68i/pkg/matrix/matrix_write_tendency.F
MITgcm-checkpoint68i/pkg/mdsio/
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_3D.h
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_WH.h
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_OPTIONS.h
MITgcm-checkpoint68i/pkg/mdsio/mdsio_ad.flow
MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertorl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_check4file.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_facef_read.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl_slice.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rs.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_meta.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_section.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_tape.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_whalos.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_readvec_loc.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_slice.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_segxtorx_2d.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_metafiles.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rs.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_meta.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_section.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_tape.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_whalos.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_writelocal.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_writevec_loc.F
MITgcm-checkpoint68i/pkg/mnc/
MITgcm-checkpoint68i/pkg/mnc/CPP_OPTIONS.t
MITgcm-checkpoint68i/pkg/mnc/MNC_BUFF.h
MITgcm-checkpoint68i/pkg/mnc/MNC_COMMON.h
MITgcm-checkpoint68i/pkg/mnc/MNC_OPTIONS.h
MITgcm-checkpoint68i/pkg/mnc/MNC_PARAMS.h
MITgcm-checkpoint68i/pkg/mnc/MNC_SIZE.h
MITgcm-checkpoint68i/pkg/mnc/Makefile
MITgcm-checkpoint68i/pkg/mnc/PACKAGES_CONFIG.t
MITgcm-checkpoint68i/pkg/mnc/README.txt
MITgcm-checkpoint68i/pkg/mnc/SIZE.t
MITgcm-checkpoint68i/pkg/mnc/TESTING_README.txt
MITgcm-checkpoint68i/pkg/mnc/build_netcdf_stubs
MITgcm-checkpoint68i/pkg/mnc/mnc_ad.flow
MITgcm-checkpoint68i/pkg/mnc/mnc_create_dir.c
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_citer.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_cvars.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_fsize.c
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_init.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_missingvals.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_model_attr.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_readwrite.template
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_udim.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_write_grid_info.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cwrapper.F
MITgcm-checkpoint68i/pkg/mnc/mnc_description.tex
MITgcm-checkpoint68i/pkg/mnc/mnc_dim.F
MITgcm-checkpoint68i/pkg/mnc/mnc_dump.F
MITgcm-checkpoint68i/pkg/mnc/mnc_file.F
MITgcm-checkpoint68i/pkg/mnc/mnc_grid.F
MITgcm-checkpoint68i/pkg/mnc/mnc_init.F
MITgcm-checkpoint68i/pkg/mnc/mnc_readparms.F
MITgcm-checkpoint68i/pkg/mnc/mnc_test_001.T
MITgcm-checkpoint68i/pkg/mnc/mnc_test_002.T
MITgcm-checkpoint68i/pkg/mnc/mnc_test_utils.T
MITgcm-checkpoint68i/pkg/mnc/mnc_update_time.F
MITgcm-checkpoint68i/pkg/mnc/mnc_utils.F
MITgcm-checkpoint68i/pkg/mnc/mnc_var.F
MITgcm-checkpoint68i/pkg/mnc/parse_local_info
MITgcm-checkpoint68i/pkg/mnc/pre-defined_grids.txt
MITgcm-checkpoint68i/pkg/mom_common/
MITgcm-checkpoint68i/pkg/mom_common/MOM_COMMON_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_common/MOM_VISC.h
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_3d_strain.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_absvort3.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hdiv.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hfacz.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_ke.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_relvort3.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_strain.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_tension.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_visc.F
MITgcm-checkpoint68i/pkg/mom_common/mom_common_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_common/mom_diagnostics_init.F
MITgcm-checkpoint68i/pkg/mom_common/mom_hdissip.F
MITgcm-checkpoint68i/pkg/mom_common/mom_init_fixed.F
MITgcm-checkpoint68i/pkg/mom_common/mom_quasihydrostatic.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_botdrag_coeff.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_implicit_r.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_rviscflux.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_uv_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_botdrag_coeff.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_implicit_r.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_rviscflux.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_limit.F
MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_stretch.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_fluxform/
MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM.h
MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_calc_rtrans.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_uu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_vu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_wu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_coriolis.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_del2u.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_cylinder.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_sphere.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_xviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_yviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_uv_boundary.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_uv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_vv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_wv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_coriolis.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_del2v.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_cylinder.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_sphere.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_xviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_yviscflux.F
MITgcm-checkpoint68i/pkg/mom_vecinv/
MITgcm-checkpoint68i/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_del2uv.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_hdissip.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_grad_ke.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_vertshear.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_grad_ke.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_vertshear.F
MITgcm-checkpoint68i/pkg/monitor/
MITgcm-checkpoint68i/pkg/monitor/MONITOR.h
MITgcm-checkpoint68i/pkg/monitor/MONITOR_OPTIONS.h
MITgcm-checkpoint68i/pkg/monitor/mon_advcfl.F
MITgcm-checkpoint68i/pkg/monitor/mon_advcflw.F
MITgcm-checkpoint68i/pkg/monitor/mon_advcflw2.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_advcfl.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_description.tex
MITgcm-checkpoint68i/pkg/monitor/mon_init.F
MITgcm-checkpoint68i/pkg/monitor/mon_ke.F
MITgcm-checkpoint68i/pkg/monitor/mon_out.F
MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_set_iounit.F
MITgcm-checkpoint68i/pkg/monitor/mon_set_pref.F
MITgcm-checkpoint68i/pkg/monitor/mon_solution.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_latbnd_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_surfcor.F
MITgcm-checkpoint68i/pkg/monitor/mon_vort3.F
MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rs.F
MITgcm-checkpoint68i/pkg/monitor/monitor.F
MITgcm-checkpoint68i/pkg/monitor/monitor_ad.F
MITgcm-checkpoint68i/pkg/monitor/monitor_ad.flow
MITgcm-checkpoint68i/pkg/monitor/monitor_description.tex
MITgcm-checkpoint68i/pkg/monitor/monitor_g.F
MITgcm-checkpoint68i/pkg/my82/
MITgcm-checkpoint68i/pkg/my82/MY82.h
MITgcm-checkpoint68i/pkg/my82/MY82_OPTIONS.h
MITgcm-checkpoint68i/pkg/my82/my82_calc.F
MITgcm-checkpoint68i/pkg/my82/my82_calc_diff.F
MITgcm-checkpoint68i/pkg/my82/my82_calc_visc.F
MITgcm-checkpoint68i/pkg/my82/my82_check.F
MITgcm-checkpoint68i/pkg/my82/my82_diagnostics_init.F
MITgcm-checkpoint68i/pkg/my82/my82_init_fixed.F
MITgcm-checkpoint68i/pkg/my82/my82_init_varia.F
MITgcm-checkpoint68i/pkg/my82/my82_output.F
MITgcm-checkpoint68i/pkg/my82/my82_readparms.F
MITgcm-checkpoint68i/pkg/my82/my82_ri_number.F
MITgcm-checkpoint68i/pkg/mypackage/
MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE.h
MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE_OPTIONS.h
MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad.flow
MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad_diff.list
MITgcm-checkpoint68i/pkg/mypackage/mypackage_calc_rhs.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_check.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_description.tex
MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_init.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_state.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_fixed.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_varia.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_mnc_init.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_read_pickup.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_readparms.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_tendency_apply.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_write_pickup.F
MITgcm-checkpoint68i/pkg/obcs/
MITgcm-checkpoint68i/pkg/obcs/OBCS_FIELDS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_GRID.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_OPTIONS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_PARAMS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_PTRACERS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_SEAICE.h
MITgcm-checkpoint68i/pkg/obcs/ORLANSKI.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad.flow
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_diff.list
MITgcm-checkpoint68i/pkg/obcs/obcs_add_tides.F
MITgcm-checkpoint68i/pkg/obcs/obcs_adjust.F
MITgcm-checkpoint68i/pkg/obcs/obcs_adjust_uvice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_eta.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ptracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_r_star.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_seaice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_surf_dr.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ts.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uv.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uvice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_w.F
MITgcm-checkpoint68i/pkg/obcs/obcs_balance_flow.F
MITgcm-checkpoint68i/pkg/obcs/obcs_calc.F
MITgcm-checkpoint68i/pkg/obcs/obcs_calc_stevens.F
MITgcm-checkpoint68i/pkg/obcs/obcs_check.F
MITgcm-checkpoint68i/pkg/obcs/obcs_check_depths.F
MITgcm-checkpoint68i/pkg/obcs/obcs_copy_tracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_copy_uv_n.F
MITgcm-checkpoint68i/pkg/obcs/obcs_description.tex
MITgcm-checkpoint68i/pkg/obcs/obcs_diag_balance.F
MITgcm-checkpoint68i/pkg/obcs/obcs_exchanges.F
MITgcm-checkpoint68i/pkg/obcs/obcs_exf_load.F
MITgcm-checkpoint68i/pkg/obcs/obcs_fields_load.F
MITgcm-checkpoint68i/pkg/obcs/obcs_init_fixed.F
MITgcm-checkpoint68i/pkg/obcs/obcs_init_variables.F
MITgcm-checkpoint68i/pkg/obcs/obcs_mon_stats.F
MITgcm-checkpoint68i/pkg/obcs/obcs_monitor.F
MITgcm-checkpoint68i/pkg/obcs/obcs_output.F
MITgcm-checkpoint68i/pkg/obcs/obcs_prescribe_read.F
MITgcm-checkpoint68i/pkg/obcs/obcs_read_pickup.F
MITgcm-checkpoint68i/pkg/obcs/obcs_readparms.F
MITgcm-checkpoint68i/pkg/obcs/obcs_save_uv_n.F
MITgcm-checkpoint68i/pkg/obcs/obcs_seaice_sponge.F
MITgcm-checkpoint68i/pkg/obcs/obcs_set_connect.F
MITgcm-checkpoint68i/pkg/obcs/obcs_sponge.F
MITgcm-checkpoint68i/pkg/obcs/obcs_u1_adv_tracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_write_pickup.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_east.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_init.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_north.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_south.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_west.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/
MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_PARAMS.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_TAVE.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCNCPL.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCN_CPL_OPTIONS.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_exch_configs.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_export_import_data.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_import_cplparms.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_ini_vars.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init_fixed.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_output.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_readparms.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_register.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_write_pickup.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_apply_import.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_check_cplconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_diags.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_read_pickup.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_data.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_fields.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_ocnconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_atmconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_fields.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_store_my_data.F
MITgcm-checkpoint68i/pkg/offline/
MITgcm-checkpoint68i/pkg/offline/OFFLINE.h
MITgcm-checkpoint68i/pkg/offline/OFFLINE_OPTIONS.h
MITgcm-checkpoint68i/pkg/offline/OFFLINE_SWITCH.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_diff.list
MITgcm-checkpoint68i/pkg/offline/offline_check.F
MITgcm-checkpoint68i/pkg/offline/offline_fields_load.F
MITgcm-checkpoint68i/pkg/offline/offline_get_diffus.F
MITgcm-checkpoint68i/pkg/offline/offline_init_varia.F
MITgcm-checkpoint68i/pkg/offline/offline_readparms.F
MITgcm-checkpoint68i/pkg/offline/offline_reset_parms.F
MITgcm-checkpoint68i/pkg/openad/
MITgcm-checkpoint68i/pkg/openad/OPENAD_OPTIONS.h
MITgcm-checkpoint68i/pkg/openad/ad_s_different_multiple.F
MITgcm-checkpoint68i/pkg/openad/ad_s_ifnblnk.F
MITgcm-checkpoint68i/pkg/openad/ad_s_ilnblnk.F
MITgcm-checkpoint68i/pkg/openad/ad_s_mds_reclen.F
MITgcm-checkpoint68i/pkg/openad/externalDummies.F
MITgcm-checkpoint68i/pkg/openad/findAndDiff.bash
MITgcm-checkpoint68i/pkg/openad/inner_do_loop.F
MITgcm-checkpoint68i/pkg/openad/openad_ad_diff.list
MITgcm-checkpoint68i/pkg/openad/openad_checkpointInit.F
MITgcm-checkpoint68i/pkg/openad/openad_dumpAdjoint.F
MITgcm-checkpoint68i/pkg/openad/seawater.F
MITgcm-checkpoint68i/pkg/openad/the_model_main.F
MITgcm-checkpoint68i/pkg/opps/
MITgcm-checkpoint68i/pkg/opps/OPPS.h
MITgcm-checkpoint68i/pkg/opps/OPPS_OPTIONS.h
MITgcm-checkpoint68i/pkg/opps/opps_calc.F
MITgcm-checkpoint68i/pkg/opps/opps_check.F
MITgcm-checkpoint68i/pkg/opps/opps_init.F
MITgcm-checkpoint68i/pkg/opps/opps_interface.F
MITgcm-checkpoint68i/pkg/opps/opps_readparms.F
MITgcm-checkpoint68i/pkg/pkg_depend
MITgcm-checkpoint68i/pkg/pkg_groups
MITgcm-checkpoint68i/pkg/pp81/
MITgcm-checkpoint68i/pkg/pp81/PP81.h
MITgcm-checkpoint68i/pkg/pp81/PP81_OPTIONS.h
MITgcm-checkpoint68i/pkg/pp81/pp81_calc.F
MITgcm-checkpoint68i/pkg/pp81/pp81_calc_diff.F
MITgcm-checkpoint68i/pkg/pp81/pp81_calc_visc.F
MITgcm-checkpoint68i/pkg/pp81/pp81_check.F
MITgcm-checkpoint68i/pkg/pp81/pp81_diagnostics_init.F
MITgcm-checkpoint68i/pkg/pp81/pp81_init_fixed.F
MITgcm-checkpoint68i/pkg/pp81/pp81_init_varia.F
MITgcm-checkpoint68i/pkg/pp81/pp81_output.F
MITgcm-checkpoint68i/pkg/pp81/pp81_readparms.F
MITgcm-checkpoint68i/pkg/pp81/pp81_ri_number.F
MITgcm-checkpoint68i/pkg/profiles/
MITgcm-checkpoint68i/pkg/profiles/PROFILES_OPTIONS.h
MITgcm-checkpoint68i/pkg/profiles/PROFILES_SIZE.h
MITgcm-checkpoint68i/pkg/profiles/active_file_control_profiles.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.flow
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_ad.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_g.F
MITgcm-checkpoint68i/pkg/profiles/cost_profiles.F
MITgcm-checkpoint68i/pkg/profiles/profiles.flow
MITgcm-checkpoint68i/pkg/profiles/profiles.h
MITgcm-checkpoint68i/pkg/profiles/profiles_ad_diff.list
MITgcm-checkpoint68i/pkg/profiles/profiles_findunit.F
MITgcm-checkpoint68i/pkg/profiles/profiles_ini_io.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_fixed.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_ncfile.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_varia.F
MITgcm-checkpoint68i/pkg/profiles/profiles_inloop.F
MITgcm-checkpoint68i/pkg/profiles/profiles_interp.F
MITgcm-checkpoint68i/pkg/profiles/profiles_readparms.F
MITgcm-checkpoint68i/pkg/profiles/profiles_readvector.F
MITgcm-checkpoint68i/pkg/ptracers/
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_FIELDS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_MOD.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_OPTIONS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_PARAMS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_SIZE.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_START.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_TAVE.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad.flow
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_diff.list
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_dump.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_adcommon.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_apply_forcing.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_calc_wsurf_tr.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_check.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_check_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_convect.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_debug.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_state.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_data_mod.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_mod.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_fields_blocking_exch.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_forcing_surf.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_fixed.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_varia.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_integrate.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_mnc_init.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor_ad.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_output.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_read_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_readparms.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_reset.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_set_iolabel.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_switch_onoff.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_timeave.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_turnoff_io.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_state.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_timeave.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_zonal_filt_apply.F
MITgcm-checkpoint68i/pkg/rbcs/
MITgcm-checkpoint68i/pkg/rbcs/RBCS_FIELDS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_OPTIONS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_PARAMS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_SIZE.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_diff.list
MITgcm-checkpoint68i/pkg/rbcs/rbcs_add_tendency.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_fields_load.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_fixed.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_varia.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_readparms.F
MITgcm-checkpoint68i/pkg/regrid/
MITgcm-checkpoint68i/pkg/regrid/Makefile
MITgcm-checkpoint68i/pkg/regrid/REGRID.h
MITgcm-checkpoint68i/pkg/regrid/REGRID_OPTIONS.h
MITgcm-checkpoint68i/pkg/regrid/REGRID_SIZE.h
MITgcm-checkpoint68i/pkg/regrid/regrid_check.F
MITgcm-checkpoint68i/pkg/regrid/regrid_description.tex
MITgcm-checkpoint68i/pkg/regrid/regrid_init_fixed.F
MITgcm-checkpoint68i/pkg/regrid/regrid_init_varia.F
MITgcm-checkpoint68i/pkg/regrid/regrid_mnc_init.F
MITgcm-checkpoint68i/pkg/regrid/regrid_readparms.F
MITgcm-checkpoint68i/pkg/regrid/regrid_scalar_out.template
MITgcm-checkpoint68i/pkg/runclock/
MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK.h
MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK_OPTIONS.h
MITgcm-checkpoint68i/pkg/runclock/runclock_check.F
MITgcm-checkpoint68i/pkg/runclock/runclock_continue.F
MITgcm-checkpoint68i/pkg/runclock/runclock_gettime.F
MITgcm-checkpoint68i/pkg/runclock/runclock_init.F
MITgcm-checkpoint68i/pkg/runclock/runclock_readparms.F
MITgcm-checkpoint68i/pkg/rw/
MITgcm-checkpoint68i/pkg/rw/RW_MFLDS.h
MITgcm-checkpoint68i/pkg/rw/RW_OPTIONS.h
MITgcm-checkpoint68i/pkg/rw/get_write_global_fld.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rl.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rs.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rl.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rs.F
MITgcm-checkpoint68i/pkg/rw/read_glvec_rl.F
MITgcm-checkpoint68i/pkg/rw/read_glvec_rs.F
MITgcm-checkpoint68i/pkg/rw/read_mflds.F
MITgcm-checkpoint68i/pkg/rw/read_rec.F
MITgcm-checkpoint68i/pkg/rw/rw_ad.flow
MITgcm-checkpoint68i/pkg/rw/rw_ad_diff.list
MITgcm-checkpoint68i/pkg/rw/rw_get_suffix.F
MITgcm-checkpoint68i/pkg/rw/set_write_global_fld.F
MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rs.F
MITgcm-checkpoint68i/pkg/rw/write_glvec_rl.F
MITgcm-checkpoint68i/pkg/rw/write_glvec_rs.F
MITgcm-checkpoint68i/pkg/rw/write_local_rl.F
MITgcm-checkpoint68i/pkg/rw/write_local_rs.F
MITgcm-checkpoint68i/pkg/rw/write_rec.F
MITgcm-checkpoint68i/pkg/salt_plume/
MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME.h
MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME_OPTIONS.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_diff.list
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_apply.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_calc_depth.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_check.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_description.tex
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_init.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_do_exch.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_forcing_surf.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_frac.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_fixed.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_varia.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_mnc_init.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_readparms.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_s.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_t.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_volfrac.F
MITgcm-checkpoint68i/pkg/sbo/
MITgcm-checkpoint68i/pkg/sbo/SBO.h
MITgcm-checkpoint68i/pkg/sbo/SBO_OPTIONS.h
MITgcm-checkpoint68i/pkg/sbo/sbo_calc.F
MITgcm-checkpoint68i/pkg/sbo/sbo_check.F
MITgcm-checkpoint68i/pkg/sbo/sbo_description.tex
MITgcm-checkpoint68i/pkg/sbo/sbo_output.F
MITgcm-checkpoint68i/pkg/sbo/sbo_readparms.F
MITgcm-checkpoint68i/pkg/sbo/sbo_rho.F
MITgcm-checkpoint68i/pkg/seaice/
MITgcm-checkpoint68i/pkg/seaice/SEAICE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_COST.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_PARAMS.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_SIZE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_TAVE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_TRACER.h
MITgcm-checkpoint68i/pkg/seaice/advect.F
MITgcm-checkpoint68i/pkg/seaice/cost_ice_test.F
MITgcm-checkpoint68i/pkg/seaice/diffus.F
MITgcm-checkpoint68i/pkg/seaice/dynsolver.F
MITgcm-checkpoint68i/pkg/seaice/lsr.F
MITgcm-checkpoint68i/pkg/seaice/ostres.F
MITgcm-checkpoint68i/pkg/seaice/seaice.flow
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_diff.list
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_dump.F
MITgcm-checkpoint68i/pkg/seaice/seaice_advdiff.F
MITgcm-checkpoint68i/pkg/seaice/seaice_advection.F
MITgcm-checkpoint68i/pkg/seaice/seaice_bottomdrag_coeffs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_budget_ocean.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_ice_strength.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_lhs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_residual.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_rhs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_strainrates.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_stressdiv.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_viscosities.F
MITgcm-checkpoint68i/pkg/seaice/seaice_check.F
MITgcm-checkpoint68i/pkg/seaice/seaice_check_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_accumulate_mean.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_areasst.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_concentration.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_driver.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_export.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_final.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_fixed.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_varia.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sensi.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sss.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sst.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_weights.F
MITgcm-checkpoint68i/pkg/seaice/seaice_ctrl_map_ini.F
MITgcm-checkpoint68i/pkg/seaice/seaice_description.tex
MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_init.F
MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/seaice/seaice_diffusion.F
MITgcm-checkpoint68i/pkg/seaice/seaice_do_ridging.F
MITgcm-checkpoint68i/pkg/seaice/seaice_dynsolver.F
MITgcm-checkpoint68i/pkg/seaice/seaice_evp.F
MITgcm-checkpoint68i/pkg/seaice/seaice_fake.F
MITgcm-checkpoint68i/pkg/seaice/seaice_fgmres.F
MITgcm-checkpoint68i/pkg/seaice/seaice_freedrift.F
MITgcm-checkpoint68i/pkg/seaice/seaice_get_dynforcing.F
MITgcm-checkpoint68i/pkg/seaice/seaice_growth.F
MITgcm-checkpoint68i/pkg/seaice/seaice_growth_adx.F
MITgcm-checkpoint68i/pkg/seaice/seaice_init_fixed.F
MITgcm-checkpoint68i/pkg/seaice/seaice_init_varia.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_redist.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_remap.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_sum.F
MITgcm-checkpoint68i/pkg/seaice/seaice_jacvec.F
MITgcm-checkpoint68i/pkg/seaice/seaice_jfnk.F
MITgcm-checkpoint68i/pkg/seaice/seaice_krylov.F
MITgcm-checkpoint68i/pkg/seaice/seaice_lsr.F
MITgcm-checkpoint68i/pkg/seaice/seaice_map_thsice.F
MITgcm-checkpoint68i/pkg/seaice/seaice_mnc_init.F
MITgcm-checkpoint68i/pkg/seaice/seaice_model.F
MITgcm-checkpoint68i/pkg/seaice/seaice_mom_advection.F
MITgcm-checkpoint68i/pkg/seaice/seaice_monitor.F
MITgcm-checkpoint68i/pkg/seaice/seaice_monitor_ad.F
MITgcm-checkpoint68i/pkg/seaice/seaice_obcs_output.F
MITgcm-checkpoint68i/pkg/seaice/seaice_ocean_stress.F
MITgcm-checkpoint68i/pkg/seaice/seaice_oceandrag_coeffs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_output.F
MITgcm-checkpoint68i/pkg/seaice/seaice_preconditioner.F
MITgcm-checkpoint68i/pkg/seaice/seaice_prepare_ridging.F
MITgcm-checkpoint68i/pkg/seaice/seaice_read_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_readparms.F
MITgcm-checkpoint68i/pkg/seaice/seaice_reg_ridge.F
MITgcm-checkpoint68i/pkg/seaice/seaice_solve4temp.F
MITgcm-checkpoint68i/pkg/seaice/seaice_summary.F
MITgcm-checkpoint68i/pkg/seaice/seaice_tracer_phys.F
MITgcm-checkpoint68i/pkg/seaice/seaice_turnoff_io.F
MITgcm-checkpoint68i/pkg/seaice/seaice_write_pickup.F
MITgcm-checkpoint68i/pkg/shap_filt/
MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT.h
MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT_OPTIONS.h
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_ad_diff.list
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_ts.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_uv.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_computvort.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_diagnostics_init.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_init_fixed.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_readparms.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_relvort3.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s1.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s2.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s4.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracerold.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_u.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s1.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2c.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s4.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_v.F
MITgcm-checkpoint68i/pkg/shelfice/
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_COST.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_TAVE.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_diff.list
MITgcm-checkpoint68i/pkg/shelfice/shelfice_check.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_accumulate.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_final.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_shifwflx.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_diagnostics_drag.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing_surf.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_depths.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_fixed.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_varia.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_mask_seaice.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_mnc_init.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_output.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_read_pickup.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_readparms.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_c_mask.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_calc_w.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_state.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_uv_mask.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remeshing.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_step_icemass.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_thermodynamics.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_u_drag_coeff.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_v_drag_coeff.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_write_pickup.F
MITgcm-checkpoint68i/pkg/showflops/
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS.h
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_INIT.h
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_OPTIONS.h
MITgcm-checkpoint68i/pkg/showflops/showflops_ad.flow
MITgcm-checkpoint68i/pkg/showflops/showflops_init.F
MITgcm-checkpoint68i/pkg/showflops/showflops_inloop.F
MITgcm-checkpoint68i/pkg/showflops/showflops_insolve.F
MITgcm-checkpoint68i/pkg/smooth/
MITgcm-checkpoint68i/pkg/smooth/SMOOTH.h
MITgcm-checkpoint68i/pkg/smooth/SMOOTH_OPTIONS.h
MITgcm-checkpoint68i/pkg/smooth/smooth2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_ad_diff.list
MITgcm-checkpoint68i/pkg/smooth/smooth_basic2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_check.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl2dw.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_description.tex
MITgcm-checkpoint68i/pkg/smooth/smooth_diff2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_diff3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_hetero2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_impldiff.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init_fixed.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init_varia.F
MITgcm-checkpoint68i/pkg/smooth/smooth_readparms.F
MITgcm-checkpoint68i/pkg/smooth/smooth_rhs.F
MITgcm-checkpoint68i/pkg/sphere/
MITgcm-checkpoint68i/pkg/sphere/exch_all_2d_rl.F
MITgcm-checkpoint68i/pkg/sphere/sphere.F
MITgcm-checkpoint68i/pkg/sphere/sphere.h
MITgcm-checkpoint68i/pkg/sphere/sphere_ad.flow
MITgcm-checkpoint68i/pkg/sphere/sphere_ad_diff.list
MITgcm-checkpoint68i/pkg/streamice/
MITgcm-checkpoint68i/pkg/streamice/STREAMICE.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_ADV.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_BDRY.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CG.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CTRL_FLUX.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_PETSC.h
MITgcm-checkpoint68i/pkg/streamice/adstreamice_cg_solve.F
MITgcm-checkpoint68i/pkg/streamice/adstreamice_invert_surf_forthick.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_prime_streamice.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice_prime.F
MITgcm-checkpoint68i/pkg/streamice/phi_gl_streamice.F
MITgcm-checkpoint68i/pkg/streamice/slope_limiter.F
MITgcm-checkpoint68i/pkg/streamice/streamice.flow
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_diff.list
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_x.F
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_y.F
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_front.F
MITgcm-checkpoint68i/pkg/streamice/streamice_advect_2dtracer.F
MITgcm-checkpoint68i/pkg/streamice/streamice_advect_thickness.F
MITgcm-checkpoint68i/pkg/streamice/streamice_apply_flux_ctrl.F
MITgcm-checkpoint68i/pkg/streamice/streamice_bstress_exponent.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_functions.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_matfree.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_wrapper.F
MITgcm-checkpoint68i/pkg/streamice/streamice_check.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cost_surf_accum.F
MITgcm-checkpoint68i/pkg/streamice/streamice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_fd.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_ppm.F
MITgcm-checkpoint68i/pkg/streamice/streamice_dump.F
MITgcm-checkpoint68i/pkg/streamice/streamice_dump_ad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_fields_load.F
MITgcm-checkpoint68i/pkg/streamice/streamice_finalize_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_forced_buttress.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_fp_err_oad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_fp_err.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err_oad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_diagnostics.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_fixed.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_phi.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_varia.F
MITgcm-checkpoint68i/pkg/streamice/streamice_initialise_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_invert_surf_forthick.F
MITgcm-checkpoint68i/pkg/streamice/streamice_petsc_numerate.F
MITgcm-checkpoint68i/pkg/streamice/streamice_petscmatdestroy.F
MITgcm-checkpoint68i/pkg/streamice/streamice_read_pickup.F
MITgcm-checkpoint68i/pkg/streamice/streamice_readparms.F
MITgcm-checkpoint68i/pkg/streamice/streamice_taub.F
MITgcm-checkpoint68i/pkg/streamice/streamice_timestep.F
MITgcm-checkpoint68i/pkg/streamice/streamice_tridiag_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_upd_ffrac_uncoupled.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phi.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phistage.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve_openad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_velmask_upd.F
MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta.F
MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta_hybrid.F
MITgcm-checkpoint68i/pkg/streamice/streamice_write_pickup.F
MITgcm-checkpoint68i/pkg/thsice/
MITgcm-checkpoint68i/pkg/thsice/THSICE_COST.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_DEBUG.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_PARAMS.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_SIZE.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_TAVE.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_VARS.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad.flow
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_diff.list
MITgcm-checkpoint68i/pkg/thsice/thsice_advdiff.F
MITgcm-checkpoint68i/pkg/thsice/thsice_advection.F
MITgcm-checkpoint68i/pkg/thsice/thsice_albedo.F
MITgcm-checkpoint68i/pkg/thsice/thsice_ave.F
MITgcm-checkpoint68i/pkg/thsice/thsice_balance_frw.F
MITgcm-checkpoint68i/pkg/thsice/thsice_calc_thickn.F
MITgcm-checkpoint68i/pkg/thsice/thsice_check.F
MITgcm-checkpoint68i/pkg/thsice/thsice_check_conserv.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_driver.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_final.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_init_varia.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_test.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_init.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diffusion.F
MITgcm-checkpoint68i/pkg/thsice/thsice_do_advect.F
MITgcm-checkpoint68i/pkg/thsice/thsice_do_exch.F
MITgcm-checkpoint68i/pkg/thsice/thsice_extend.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_bulkf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_exf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_ocean.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_precip.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_velocity.F
MITgcm-checkpoint68i/pkg/thsice/thsice_impl_temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_ini_vars.F
MITgcm-checkpoint68i/pkg/thsice/thsice_init_fixed.F
MITgcm-checkpoint68i/pkg/thsice/thsice_main.F
MITgcm-checkpoint68i/pkg/thsice/thsice_map_exf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_mnc_init.F
MITgcm-checkpoint68i/pkg/thsice/thsice_monitor.F
MITgcm-checkpoint68i/pkg/thsice/thsice_output.F
MITgcm-checkpoint68i/pkg/thsice/thsice_read_pickup.F
MITgcm-checkpoint68i/pkg/thsice/thsice_readparms.F
MITgcm-checkpoint68i/pkg/thsice/thsice_reshape_layers.F
MITgcm-checkpoint68i/pkg/thsice/thsice_salt_plume.F
MITgcm-checkpoint68i/pkg/thsice/thsice_slab_ocean.F
MITgcm-checkpoint68i/pkg/thsice/thsice_solve4temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_step_fwd.F
MITgcm-checkpoint68i/pkg/thsice/thsice_step_temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_test_addfluid.h
MITgcm-checkpoint68i/pkg/thsice/thsice_turnoff_io.F
MITgcm-checkpoint68i/pkg/thsice/thsice_write_pickup.F
MITgcm-checkpoint68i/pkg/timeave/
MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_OPTIONS.h
MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_STATV.h
MITgcm-checkpoint68i/pkg/timeave/timeave_ad_diff.list
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1k1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1vfc.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2v.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2vfc.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_dif_1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumulate.F
MITgcm-checkpoint68i/pkg/timeave/timeave_description.tex
MITgcm-checkpoint68i/pkg/timeave/timeave_init_fixed.F
MITgcm-checkpoint68i/pkg/timeave/timeave_norma_2v.F
MITgcm-checkpoint68i/pkg/timeave/timeave_normalize.F
MITgcm-checkpoint68i/pkg/timeave/timeave_reset.F
MITgcm-checkpoint68i/pkg/timeave/timeave_statv_write.F
MITgcm-checkpoint68i/pkg/timeave/timeave_statvars.F
MITgcm-checkpoint68i/pkg/timeave/timeave_surf_flux.F
MITgcm-checkpoint68i/pkg/zonal_filt/
MITgcm-checkpoint68i/pkg/zonal_filt/FFTPACK.h
MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT.h
MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT_OPTIONS.h
MITgcm-checkpoint68i/pkg/zonal_filt/fftpack.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_ts.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_uv.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_init.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_nofill.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_postsmooth.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_presmooth.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_readparms.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filter.F
MITgcm-checkpoint68i/tools/
MITgcm-checkpoint68i/tools/OAD_support/
MITgcm-checkpoint68i/tools/OAD_support/OAD_active.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_cp.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_regular_cp.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_rev.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_tape.F90
MITgcm-checkpoint68i/tools/OAD_support/ad_inline.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xy.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xyz.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_write_xy.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.dummy_in_stepping.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rl.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rs.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_max_r8.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_r8.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_tile_rl.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.regular.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.revolve.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.sa_cg2d.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.split.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.split_non_anonymous.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_cg_solve.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_fp_err_oad.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_vel_resid_err_oad.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_invert_surf_forthick.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_smooth_adjoint_field.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_vel_phistage.F
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.awk
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.csh
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.awk
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.csh
MITgcm-checkpoint68i/tools/OAD_support/cb2mUseModules.bash
MITgcm-checkpoint68i/tools/OAD_support/dontCompile
MITgcm-checkpoint68i/tools/OAD_support/dontTransform
MITgcm-checkpoint68i/tools/OAD_support/fixData.sed
MITgcm-checkpoint68i/tools/OAD_support/iaddr.c
MITgcm-checkpoint68i/tools/OAD_support/insertTemplateDir.bash
MITgcm-checkpoint68i/tools/OAD_support/keepOriginal
MITgcm-checkpoint68i/tools/OAD_support/revolve.F90
MITgcm-checkpoint68i/tools/OAD_support/stop2print.sed
MITgcm-checkpoint68i/tools/OAD_support/strip.sed
MITgcm-checkpoint68i/tools/OAD_support/timeRatio.c
MITgcm-checkpoint68i/tools/OAD_support/w2f__types.F90
MITgcm-checkpoint68i/tools/ad_taf_output.f.adtrick.diff
MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_del1
MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_full
MITgcm-checkpoint68i/tools/ad_taf_output.f.onlyfwd.diff
MITgcm-checkpoint68i/tools/adjoint_options/
MITgcm-checkpoint68i/tools/adjoint_options/MITgcm-c64l-TAFv2.patch
MITgcm-checkpoint68i/tools/adjoint_options/README.patch
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_default
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_diva
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_f95
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_oad
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_state_final
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_tamc_compatibility
MITgcm-checkpoint68i/tools/adjoint_sed
MITgcm-checkpoint68i/tools/as
MITgcm-checkpoint68i/tools/build_options/
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-6_f90+mpi_caspur
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-6_sx90_dkrz
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-ACE_sxf90_awi
MITgcm-checkpoint68i/tools/build_options/cygwin_ia32_g77
MITgcm-checkpoint68i/tools/build_options/darwin_absoft_f77
MITgcm-checkpoint68i/tools/build_options/darwin_amd64_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_arm64_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_g95
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_ifort
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_pgf95_trane
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_f95
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_g77
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther+wienders
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther_baylor
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_tiger_baylor
MITgcm-checkpoint68i/tools/build_options/linux_alpha_g77
MITgcm-checkpoint68i/tools/build_options/linux_amd64_absoft
MITgcm-checkpoint68i/tools/build_options/linux_amd64_g77
MITgcm-checkpoint68i/tools/build_options/linux_amd64_g95
MITgcm-checkpoint68i/tools/build_options/linux_amd64_gfortran
MITgcm-checkpoint68i/tools/build_options/linux_amd64_gfortran_greenplanet
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+gcc
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi_engaging
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi_stampede2_knl
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi_stampede2_skx
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+mpi_ice_nas
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+mpi_sal_oxford
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+mpi_yellowstone
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort10-
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort11
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_beagle
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_discover
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_fimm_default
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_fimm_emic
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_uv100
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MITgcm-checkpoint68i/tools/icard
MITgcm-checkpoint68i/tools/mpack-1.6/
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MITgcm-checkpoint68i/tools/set64bitConst.csh
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MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/OBCS_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/packages.conf
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/Qnet.forcing
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/T.init
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/data
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/data.obcs
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/data.pkg
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/dx.bin
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/eedata
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/eedata.mth
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/gendata.m
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/topog.slope
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/results/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/run/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/README.md
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/cmap_bluetored.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/matlab_plots.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/py_notebook.ipynb
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/build/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/LAYERS_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/SIZE.h_eddy
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/packages.conf
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/SST_relax.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/T_relax_mask.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/bathy.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.diagnostics
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.gmredi
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.layers
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.pkg
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.rbcs
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/eedata
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/eedata.mth
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.50km.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.50km.py
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.5km.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.5km.py
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/temperature.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/zonal_wind.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/results/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/run/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/build/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/apply_forcing.F
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/packages.conf
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/bathyPolR.bin
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data.mnc
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data.pkg
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/eedata
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/eedata.mth
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/reduce_size.m
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/thetaPolR.bin
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/results/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/run/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/DESCRIPTION
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/README
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/build/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/AUTODIFF_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/COST_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/CTRL_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/CTRL_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/GAD_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/MDSIO_BUFF_WH.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/packages.conf
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/ptracers_forcing_surf.F
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/tamc.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/AUTODIFF_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/COST_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/CTRL_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/CTRL_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/GAD_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/OPENAD_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/cb2mFiles
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/ctrl_map_ini_genarr.F
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/packages.conf
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/ptracers_forcing_surf.F
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad.som81/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad.som81/data
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.autodiff
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.cost
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.ctrl
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.gmredi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.grdchk
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.optim
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.pkg
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.ptracers
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/eedata
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/prepare_run
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.autodiff
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.cost
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.ctrl
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.gmredi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.grdchk
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.optim
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.pkg
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.ptracers
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/eedata
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/ncheckLev.conf
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/prepare_run
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_adm.som81.txt
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_adm.txt
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_oadm.txt
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_tlm.som81.txt.gz
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_tlm.txt.gz
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/.gitignore
MITgcm-checkpoint68i/verification/verification_parser.py
MITgcm-checkpoint68i/verification/vermix/
MITgcm-checkpoint68i/verification/vermix/build/
MITgcm-checkpoint68i/verification/vermix/build/.gitignore
MITgcm-checkpoint68i/verification/vermix/code/
MITgcm-checkpoint68i/verification/vermix/code/CPP_EEOPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/verification/vermix/code/KPP_OPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/SIZE.h
MITgcm-checkpoint68i/verification/vermix/code/packages.conf
MITgcm-checkpoint68i/verification/vermix/input.dd/
MITgcm-checkpoint68i/verification/vermix/input.dd/data
MITgcm-checkpoint68i/verification/vermix/input.dd/data.kpp
MITgcm-checkpoint68i/verification/vermix/input.ggl90/
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.ggl90
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.my82/
MITgcm-checkpoint68i/verification/vermix/input.my82/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.my82/data.my82
MITgcm-checkpoint68i/verification/vermix/input.my82/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.opps/
MITgcm-checkpoint68i/verification/vermix/input.opps/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.opps/data.opps
MITgcm-checkpoint68i/verification/vermix/input.opps/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.pp81/
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pp81
MITgcm-checkpoint68i/verification/vermix/input/
MITgcm-checkpoint68i/verification/vermix/input/Qnet_72.forcing
MITgcm-checkpoint68i/verification/vermix/input/S.doublediff
MITgcm-checkpoint68i/verification/vermix/input/S.init
MITgcm-checkpoint68i/verification/vermix/input/T.doublediff
MITgcm-checkpoint68i/verification/vermix/input/TKE.init
MITgcm-checkpoint68i/verification/vermix/input/T_26.init
MITgcm-checkpoint68i/verification/vermix/input/data
MITgcm-checkpoint68i/verification/vermix/input/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input/data.kpp
MITgcm-checkpoint68i/verification/vermix/input/data.mnc
MITgcm-checkpoint68i/verification/vermix/input/data.pkg
MITgcm-checkpoint68i/verification/vermix/input/eedata
MITgcm-checkpoint68i/verification/vermix/input/gendata.m
MITgcm-checkpoint68i/verification/vermix/input/taux_72.forcing
MITgcm-checkpoint68i/verification/vermix/input/tr_checklist
MITgcm-checkpoint68i/verification/vermix/results/
MITgcm-checkpoint68i/verification/vermix/results/output.dd.txt
MITgcm-checkpoint68i/verification/vermix/results/output.ggl90.txt
MITgcm-checkpoint68i/verification/vermix/results/output.my82.txt
MITgcm-checkpoint68i/verification/vermix/results/output.opps.txt
MITgcm-checkpoint68i/verification/vermix/results/output.pp81.txt
MITgcm-checkpoint68i/verification/vermix/results/output.txt
MITgcm-checkpoint68i/verification/vermix/run/
MITgcm-checkpoint68i/verification/vermix/run/.gitignore

[41;37m   step #5: BuildMITgcm   [0m


GENMAKE :

A program for GENerating MAKEfiles for the MITgcm project.
   For a quick list of options, use "genmake2 -h"
or for more detail see the documentation, section "Building the model"
   (under "Getting Started") at:  <a href='https://mitgcm.readthedocs.io/'>https://mitgcm.readthedocs.io/</a>

===  Processing options files and arguments  ===
  getting local config information:  none found
  getting OPTFILE information:
Warning: no OPTFILE specified so we'll look for possible settings

===  Searching for possible settings for OPTFILE  ===
  The platform appears to be:  linux_amd64
  The possible FORTRAN compilers found in your path are:  gfortran f77 f95 mpif77
  Setting OPTFILE to: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran
    using OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran"
    get Compiler-version: '12'
  getting AD_OPTFILE information:
    using AD_OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/adjoint_options/adjoint_default"
  check Fortran Compiler...  pass  (set FC_CHECK=5/5)
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/genmake2: line 1886: echo: write error: Broken pipe
  check makedepend (local: 0, system: 1, 1)
  Turning on MPI cpp macros

===  Checking system libraries  ===
  Do we have the system() command using mpif77...  yes
  Do we have the fdate() command using mpif77...  yes
  Do we have the etime() command using mpif77... c,r: yes (SbR)
  Can we call simple C routines (here, "cloc()") using mpif77...  yes
  Can we unlimit the stack size using mpif77...  yes
  Can we register a signal handler using mpif77...  yes
  Can we use stat() through C calls...  yes
  Can we create NetCDF-enabled binaries...  no
    skip check for LAPACK Libs
  Can we call FLUSH intrinsic subroutine...  yes

===  Setting defaults  ===
  Adding MODS directories: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code 
  Making source files in eesupp from templates
  Making source files in pkg/exch2 from templates
  Making source files in pkg/regrid from templates

===  Determining package settings  ===
  getting package dependency info from  /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_depend
  getting package groups info from      /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_groups
  checking list of packages to compile:
    using PKG_LIST="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/packages.conf"
    before group expansion packages are: gfd obcs shelfice diagnostics timeave
    replacing "gfd" with:  mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor
    after group expansion packages are:  mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor obcs shelfice diagnostics timeave
  applying DISABLE settings
  applying ENABLE settings
    packages are:  debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave
  applying package dependency rules
    packages are:  debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave
  Adding STANDARDDIRS='eesupp model'
  Searching for *OPTIONS.h files in order to warn about the presence
    of "#define "-type statements that are no longer allowed:
    found CPP_EEOPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h"
    found CPP_OPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h"
  Creating the list of files for the adjoint compiler.

===  Creating the Makefile  ===
  setting INCLUDES
  Determining the list of source and include files
  Writing makefile: Makefile
  Add the source list for AD code generation
  Making list of "exceptions" that need ".p" files
  Making list of NOOPTFILES
  Add rules for links
  Adding makedepend marker

===  Done  ===
  original 'Makefile' generated successfully
=&gt; next steps:
  &gt; make depend
  &gt; make       (&lt;-- to generate executable)
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build'
if [ ! -L cpl_issm.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/cpl_issm.F cpl_issm.F; fi
if [ ! -L do_oceanic_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/do_oceanic_phys.F do_oceanic_phys.F; fi
if [ ! -L eeboot_minimal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eeboot_minimal.F eeboot_minimal.F; fi
if [ ! -L eedie.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eedie.F eedie.F; fi
if [ ! -L chksum_tiled.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/chksum_tiled.F chksum_tiled.F; fi
if [ ! -L debug_call.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_call.F debug_call.F; fi
if [ ! -L debug_cs_corner_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_cs_corner_uv.F debug_cs_corner_uv.F; fi
if [ ! -L debug_enter.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_enter.F debug_enter.F; fi
if [ ! -L debug_fld_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rl.F debug_fld_stats_rl.F; fi
if [ ! -L debug_fld_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rs.F debug_fld_stats_rs.F; fi
if [ ! -L debug_leave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_leave.F debug_leave.F; fi
if [ ! -L debug_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_msg.F debug_msg.F; fi
if [ ! -L debug_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rl.F debug_stats_rl.F; fi
if [ ! -L debug_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rs.F debug_stats_rs.F; fi
if [ ! -L fill_in_corners_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/fill_in_corners_rl.F fill_in_corners_rl.F; fi
if [ ! -L write_fullarray_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rl.F write_fullarray_rl.F; fi
if [ ! -L write_fullarray_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rs.F write_fullarray_rs.F; fi
if [ ! -L diag_calc_psivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_calc_psivel.F diag_calc_psivel.F; fi
if [ ! -L diag_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_cg2d.F diag_cg2d.F; fi
if [ ! -L diagnostics_addtolist.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_addtolist.F diagnostics_addtolist.F; fi
if [ ! -L diagnostics_calc_phivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_calc_phivel.F diagnostics_calc_phivel.F; fi
if [ ! -L diagnostics_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_check.F diagnostics_check.F; fi
if [ ! -L diagnostics_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_clear.F diagnostics_clear.F; fi
if [ ! -L diagnostics_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill.F diagnostics_fill.F; fi
if [ ! -L diagnostics_fill_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_field.F diagnostics_fill_field.F; fi
if [ ! -L diagnostics_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_rs.F diagnostics_fill_rs.F; fi
if [ ! -L diagnostics_fill_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_state.F diagnostics_fill_state.F; fi
if [ ! -L diagnostics_fract_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fract_fill.F diagnostics_fract_fill.F; fi
if [ ! -L diagnostics_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_ini_io.F diagnostics_ini_io.F; fi
if [ ! -L diagnostics_init_early.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_early.F diagnostics_init_early.F; fi
if [ ! -L diagnostics_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_fixed.F diagnostics_init_fixed.F; fi
if [ ! -L diagnostics_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_varia.F diagnostics_init_varia.F; fi
if [ ! -L diagnostics_interp_p2p.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_p2p.F diagnostics_interp_p2p.F; fi
if [ ! -L diagnostics_interp_vert.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_vert.F diagnostics_interp_vert.F; fi
if [ ! -L diagnostics_is_on.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_is_on.F diagnostics_is_on.F; fi
if [ ! -L diagnostics_list_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_list_check.F diagnostics_list_check.F; fi
if [ ! -L diagnostics_main_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_main_init.F diagnostics_main_init.F; fi
if [ ! -L diagnostics_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_mnc_out.F diagnostics_mnc_out.F; fi
if [ ! -L diagnostics_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_out.F diagnostics_out.F; fi
if [ ! -L diagnostics_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_readparms.F diagnostics_readparms.F; fi
if [ ! -L diagnostics_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_read_pickup.F diagnostics_read_pickup.F; fi
if [ ! -L diagnostics_scale_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill.F diagnostics_scale_fill.F; fi
if [ ! -L diagnostics_scale_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill_rs.F diagnostics_scale_fill_rs.F; fi
if [ ! -L diagnostics_set_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_calc.F diagnostics_set_calc.F; fi
if [ ! -L diagnostics_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_setdiag.F diagnostics_setdiag.F; fi
if [ ! -L diagnostics_set_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_levels.F diagnostics_set_levels.F; fi
if [ ! -L diagnostics_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_pointers.F diagnostics_set_pointers.F; fi
if [ ! -L diagnostics_status_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_status_error.F diagnostics_status_error.F; fi
if [ ! -L diagnostics_sum_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_sum_levels.F diagnostics_sum_levels.F; fi
if [ ! -L diagnostics_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_summary.F diagnostics_summary.F; fi
if [ ! -L diagnostics_switch_onoff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_switch_onoff.F diagnostics_switch_onoff.F; fi
if [ ! -L diagnostics_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_utils.F diagnostics_utils.F; fi
if [ ! -L diagnostics_write_adj.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_adj.F diagnostics_write_adj.F; fi
if [ ! -L diagnostics_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write.F diagnostics_write.F; fi
if [ ! -L diagnostics_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_pickup.F diagnostics_write_pickup.F; fi
if [ ! -L diagstats_ascii_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ascii_out.F diagstats_ascii_out.F; fi
if [ ! -L diagstats_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_calc.F diagstats_calc.F; fi
if [ ! -L diagstats_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_clear.F diagstats_clear.F; fi
if [ ! -L diagstats_close_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_close_io.F diagstats_close_io.F; fi
if [ ! -L diagstats_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_fill.F diagstats_fill.F; fi
if [ ! -L diagstats_global.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_global.F diagstats_global.F; fi
if [ ! -L diagstats_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ini_io.F diagstats_ini_io.F; fi
if [ ! -L diagstats_local.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_local.F diagstats_local.F; fi
if [ ! -L diagstats_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_mnc_out.F diagstats_mnc_out.F; fi
if [ ! -L diagstats_others_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_others_calc.F diagstats_others_calc.F; fi
if [ ! -L diagstats_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_output.F diagstats_output.F; fi
if [ ! -L diagstats_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_setdiag.F diagstats_setdiag.F; fi
if [ ! -L diagstats_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_pointers.F diagstats_set_pointers.F; fi
if [ ! -L diagstats_set_regions.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_regions.F diagstats_set_regions.F; fi
if [ ! -L diag_vegtile_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_vegtile_fill.F diag_vegtile_fill.F; fi
if [ ! -L gad_advection.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advection.F gad_advection.F; fi
if [ ! -L gad_advscheme.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advscheme.F gad_advscheme.F; fi
if [ ! -L gad_biharm_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_r.F gad_biharm_r.F; fi
if [ ! -L gad_biharm_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_x.F gad_biharm_x.F; fi
if [ ! -L gad_biharm_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_y.F gad_biharm_y.F; fi
if [ ! -L gad_c2_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_r.F gad_c2_adv_r.F; fi
if [ ! -L gad_c2_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_x.F gad_c2_adv_x.F; fi
if [ ! -L gad_c2_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_y.F gad_c2_adv_y.F; fi
if [ ! -L gad_c2_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_impl_r.F gad_c2_impl_r.F; fi
if [ ! -L gad_c4_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_r.F gad_c4_adv_r.F; fi
if [ ! -L gad_c4_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_x.F gad_c4_adv_x.F; fi
if [ ! -L gad_c4_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_y.F gad_c4_adv_y.F; fi
if [ ! -L gad_calc_rhs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_calc_rhs.F gad_calc_rhs.F; fi
if [ ! -L gad_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_check.F gad_check.F; fi
if [ ! -L gad_del2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_del2.F gad_del2.F; fi
if [ ! -L gad_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_init.F gad_diagnostics_init.F; fi
if [ ! -L gad_diagnostics_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_state.F gad_diagnostics_state.F; fi
if [ ! -L gad_diff_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_r.F gad_diff_r.F; fi
if [ ! -L gad_diff_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_x.F gad_diff_x.F; fi
if [ ! -L gad_diff_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_y.F gad_diff_y.F; fi
if [ ! -L gad_dst2u1_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_r.F gad_dst2u1_adv_r.F; fi
if [ ! -L gad_dst2u1_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_x.F gad_dst2u1_adv_x.F; fi
if [ ! -L gad_dst2u1_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_y.F gad_dst2u1_adv_y.F; fi
if [ ! -L gad_dst2u1_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_impl_r.F gad_dst2u1_impl_r.F; fi
if [ ! -L gad_dst3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_r.F gad_dst3_adv_r.F; fi
if [ ! -L gad_dst3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_x.F gad_dst3_adv_x.F; fi
if [ ! -L gad_dst3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_y.F gad_dst3_adv_y.F; fi
if [ ! -L gad_dst3fl_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_r.F gad_dst3fl_adv_r.F; fi
if [ ! -L gad_dst3fl_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_x.F gad_dst3fl_adv_x.F; fi
if [ ! -L gad_dst3fl_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_y.F gad_dst3fl_adv_y.F; fi
if [ ! -L gad_dst3fl_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_impl_r.F gad_dst3fl_impl_r.F; fi
if [ ! -L gad_exch_som.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_exch_som.F gad_exch_som.F; fi
if [ ! -L gad_fluxlimit_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_r.F gad_fluxlimit_adv_r.F; fi
if [ ! -L gad_fluxlimit_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_x.F gad_fluxlimit_adv_x.F; fi
if [ ! -L gad_fluxlimit_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_y.F gad_fluxlimit_adv_y.F; fi
if [ ! -L gad_fluxlimit_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_impl_r.F gad_fluxlimit_impl_r.F; fi
if [ ! -L gad_grad_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_x.F gad_grad_x.F; fi
if [ ! -L gad_grad_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_y.F gad_grad_y.F; fi
if [ ! -L gad_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_implicit_r.F gad_implicit_r.F; fi
if [ ! -L gad_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_fixed.F gad_init_fixed.F; fi
if [ ! -L gad_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_varia.F gad_init_varia.F; fi
if [ ! -L gad_os7mp_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_r.F gad_os7mp_adv_r.F; fi
if [ ! -L gad_os7mp_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_x.F gad_os7mp_adv_x.F; fi
if [ ! -L gad_os7mp_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_y.F gad_os7mp_adv_y.F; fi
if [ ! -L gad_osc_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_r.F gad_osc_hat_r.F; fi
if [ ! -L gad_osc_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_x.F gad_osc_hat_x.F; fi
if [ ! -L gad_osc_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_y.F gad_osc_hat_y.F; fi
if [ ! -L gad_osc_mul_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_r.F gad_osc_mul_r.F; fi
if [ ! -L gad_osc_mul_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_x.F gad_osc_mul_x.F; fi
if [ ! -L gad_osc_mul_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_y.F gad_osc_mul_y.F; fi
if [ ! -L gad_plm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_plm_fun.F gad_plm_fun.F; fi
if [ ! -L gad_ppm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_r.F gad_ppm_adv_r.F; fi
if [ ! -L gad_ppm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_x.F gad_ppm_adv_x.F; fi
if [ ! -L gad_ppm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_y.F gad_ppm_adv_y.F; fi
if [ ! -L gad_ppm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_r.F gad_ppm_flx_r.F; fi
if [ ! -L gad_ppm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_x.F gad_ppm_flx_x.F; fi
if [ ! -L gad_ppm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_y.F gad_ppm_flx_y.F; fi
if [ ! -L gad_ppm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_fun.F gad_ppm_fun.F; fi
if [ ! -L gad_ppm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_r.F gad_ppm_hat_r.F; fi
if [ ! -L gad_ppm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_x.F gad_ppm_hat_x.F; fi
if [ ! -L gad_ppm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_y.F gad_ppm_hat_y.F; fi
if [ ! -L gad_ppm_p3e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_r.F gad_ppm_p3e_r.F; fi
if [ ! -L gad_ppm_p3e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_x.F gad_ppm_p3e_x.F; fi
if [ ! -L gad_ppm_p3e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_y.F gad_ppm_p3e_y.F; fi
if [ ! -L gad_pqm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_r.F gad_pqm_adv_r.F; fi
if [ ! -L gad_pqm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_x.F gad_pqm_adv_x.F; fi
if [ ! -L gad_pqm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_y.F gad_pqm_adv_y.F; fi
if [ ! -L gad_pqm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_r.F gad_pqm_flx_r.F; fi
if [ ! -L gad_pqm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_x.F gad_pqm_flx_x.F; fi
if [ ! -L gad_pqm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_y.F gad_pqm_flx_y.F; fi
if [ ! -L gad_pqm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_fun.F gad_pqm_fun.F; fi
if [ ! -L gad_pqm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_r.F gad_pqm_hat_r.F; fi
if [ ! -L gad_pqm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_x.F gad_pqm_hat_x.F; fi
if [ ! -L gad_pqm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_y.F gad_pqm_hat_y.F; fi
if [ ! -L gad_pqm_p5e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_r.F gad_pqm_p5e_r.F; fi
if [ ! -L gad_pqm_p5e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_x.F gad_pqm_p5e_x.F; fi
if [ ! -L gad_pqm_p5e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_y.F gad_pqm_p5e_y.F; fi
if [ ! -L gad_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_read_pickup.F gad_read_pickup.F; fi
if [ ! -L gad_som_advect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_advect.F gad_som_advect.F; fi
if [ ! -L gad_som_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_r.F gad_som_adv_r.F; fi
if [ ! -L gad_som_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_x.F gad_som_adv_x.F; fi
if [ ! -L gad_som_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_y.F gad_som_adv_y.F; fi
if [ ! -L gad_som_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_exchanges.F gad_som_exchanges.F; fi
if [ ! -L gad_som_fill_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_fill_cs_corner.F gad_som_fill_cs_corner.F; fi
if [ ! -L gad_som_lim_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_lim_r.F gad_som_lim_r.F; fi
if [ ! -L gad_som_prep_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_prep_cs_corner.F gad_som_prep_cs_corner.F; fi
if [ ! -L gad_u3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_r.F gad_u3_adv_r.F; fi
if [ ! -L gad_u3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_x.F gad_u3_adv_x.F; fi
if [ ! -L gad_u3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_y.F gad_u3_adv_y.F; fi
if [ ! -L gad_u3c4_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3c4_impl_r.F gad_u3c4_impl_r.F; fi
if [ ! -L gad_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_write_pickup.F gad_write_pickup.F; fi
if [ ! -L salt_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/salt_fill.F salt_fill.F; fi
if [ ! -L mdsio_buffertorl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertorl.F mdsio_buffertorl.F; fi
if [ ! -L mdsio_buffertors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertors.F mdsio_buffertors.F; fi
if [ ! -L mdsio_check4file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_check4file.F mdsio_check4file.F; fi
if [ ! -L mdsio_facef_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_facef_read.F mdsio_facef_read.F; fi
if [ ! -L mdsio_gl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl.F mdsio_gl.F; fi
if [ ! -L mdsio_gl_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl_slice.F mdsio_gl_slice.F; fi
if [ ! -L mdsio_pass_r4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4torl.F mdsio_pass_r4torl.F; fi
if [ ! -L mdsio_pass_r4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4tors.F mdsio_pass_r4tors.F; fi
if [ ! -L mdsio_pass_r8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8torl.F mdsio_pass_r8torl.F; fi
if [ ! -L mdsio_pass_r8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8tors.F mdsio_pass_r8tors.F; fi
if [ ! -L mdsio_rd_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rl.F mdsio_rd_rec_rl.F; fi
if [ ! -L mdsio_rd_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rs.F mdsio_rd_rec_rs.F; fi
if [ ! -L mdsio_read_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_field.F mdsio_read_field.F; fi
if [ ! -L mdsio_read_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_meta.F mdsio_read_meta.F; fi
if [ ! -L mdsio_read_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_section.F mdsio_read_section.F; fi
if [ ! -L mdsio_read_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_tape.F mdsio_read_tape.F; fi
if [ ! -L mdsio_readvec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_readvec_loc.F mdsio_readvec_loc.F; fi
if [ ! -L mdsio_read_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_whalos.F mdsio_read_whalos.F; fi
if [ ! -L mdsio_rw_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_field.F mdsio_rw_field.F; fi
if [ ! -L mdsio_rw_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_slice.F mdsio_rw_slice.F; fi
if [ ! -L mdsio_seg4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4torl.F mdsio_seg4torl.F; fi
if [ ! -L mdsio_seg4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4tors.F mdsio_seg4tors.F; fi
if [ ! -L mdsio_seg8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8torl.F mdsio_seg8torl.F; fi
if [ ! -L mdsio_seg8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8tors.F mdsio_seg8tors.F; fi
if [ ! -L mdsio_segxtorx_2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_segxtorx_2d.F mdsio_segxtorx_2d.F; fi
if [ ! -L mdsio_write_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_field.F mdsio_write_field.F; fi
if [ ! -L mdsio_writelocal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writelocal.F mdsio_writelocal.F; fi
if [ ! -L mdsio_write_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_meta.F mdsio_write_meta.F; fi
if [ ! -L mdsio_write_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_section.F mdsio_write_section.F; fi
if [ ! -L mdsio_write_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_tape.F mdsio_write_tape.F; fi
if [ ! -L mdsio_writevec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writevec_loc.F mdsio_writevec_loc.F; fi
if [ ! -L mdsio_write_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_whalos.F mdsio_write_whalos.F; fi
if [ ! -L mdsio_wr_metafiles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_metafiles.F mdsio_wr_metafiles.F; fi
if [ ! -L mdsio_wr_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rl.F mdsio_wr_rec_rl.F; fi
if [ ! -L mdsio_wr_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rs.F mdsio_wr_rec_rs.F; fi
if [ ! -L mom_calc_3d_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_3d_strain.F mom_calc_3d_strain.F; fi
if [ ! -L mom_calc_absvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_absvort3.F mom_calc_absvort3.F; fi
if [ ! -L mom_calc_hdiv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hdiv.F mom_calc_hdiv.F; fi
if [ ! -L mom_calc_hfacz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hfacz.F mom_calc_hfacz.F; fi
if [ ! -L mom_calc_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_ke.F mom_calc_ke.F; fi
if [ ! -L mom_calc_relvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_relvort3.F mom_calc_relvort3.F; fi
if [ ! -L mom_calc_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_smag_3d.F mom_calc_smag_3d.F; fi
if [ ! -L mom_calc_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_strain.F mom_calc_strain.F; fi
if [ ! -L mom_calc_tension.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_tension.F mom_calc_tension.F; fi
if [ ! -L mom_calc_visc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_visc.F mom_calc_visc.F; fi
if [ ! -L mom_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_diagnostics_init.F mom_diagnostics_init.F; fi
if [ ! -L mom_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_hdissip.F mom_hdissip.F; fi
if [ ! -L mom_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_init_fixed.F mom_init_fixed.F; fi
if [ ! -L mom_quasihydrostatic.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_quasihydrostatic.F mom_quasihydrostatic.F; fi
if [ ! -L mom_u_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_botdrag_coeff.F mom_u_botdrag_coeff.F; fi
if [ ! -L mom_u_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_coriolis_nh.F mom_u_coriolis_nh.F; fi
if [ ! -L mom_u_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_implicit_r.F mom_u_implicit_r.F; fi
if [ ! -L mom_u_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_metric_nh.F mom_u_metric_nh.F; fi
if [ ! -L mom_u_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_rviscflux.F mom_u_rviscflux.F; fi
if [ ! -L mom_u_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_sidedrag.F mom_u_sidedrag.F; fi
if [ ! -L mom_uv_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_uv_smag_3d.F mom_uv_smag_3d.F; fi
if [ ! -L mom_v_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_botdrag_coeff.F mom_v_botdrag_coeff.F; fi
if [ ! -L mom_v_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_coriolis_nh.F mom_v_coriolis_nh.F; fi
if [ ! -L mom_v_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_implicit_r.F mom_v_implicit_r.F; fi
if [ ! -L mom_visc_qgl_limit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_limit.F mom_visc_qgl_limit.F; fi
if [ ! -L mom_visc_qgl_stretch.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_stretch.F mom_visc_qgl_stretch.F; fi
if [ ! -L mom_v_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_metric_nh.F mom_v_metric_nh.F; fi
if [ ! -L mom_v_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_rviscflux.F mom_v_rviscflux.F; fi
if [ ! -L mom_v_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_sidedrag.F mom_v_sidedrag.F; fi
if [ ! -L mom_w_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_coriolis_nh.F mom_w_coriolis_nh.F; fi
if [ ! -L mom_w_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_metric_nh.F mom_w_metric_nh.F; fi
if [ ! -L mom_w_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_sidedrag.F mom_w_sidedrag.F; fi
if [ ! -L mom_w_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_smag_3d.F mom_w_smag_3d.F; fi
if [ ! -L mom_calc_rtrans.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_calc_rtrans.F mom_calc_rtrans.F; fi
if [ ! -L mom_fluxform.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_fluxform.F mom_fluxform.F; fi
if [ ! -L mom_u_adv_uu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_uu.F mom_u_adv_uu.F; fi
if [ ! -L mom_u_adv_vu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_vu.F mom_u_adv_vu.F; fi
if [ ! -L mom_u_adv_wu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_wu.F mom_u_adv_wu.F; fi
if [ ! -L mom_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_coriolis.F mom_u_coriolis.F; fi
if [ ! -L mom_u_del2u.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_del2u.F mom_u_del2u.F; fi
if [ ! -L mom_u_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_cylinder.F mom_u_metric_cylinder.F; fi
if [ ! -L mom_u_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_sphere.F mom_u_metric_sphere.F; fi
if [ ! -L mom_uv_boundary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_uv_boundary.F mom_uv_boundary.F; fi
if [ ! -L mom_u_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_xviscflux.F mom_u_xviscflux.F; fi
if [ ! -L mom_u_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_yviscflux.F mom_u_yviscflux.F; fi
if [ ! -L mom_v_adv_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_uv.F mom_v_adv_uv.F; fi
if [ ! -L mom_v_adv_vv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_vv.F mom_v_adv_vv.F; fi
if [ ! -L mom_v_adv_wv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_wv.F mom_v_adv_wv.F; fi
if [ ! -L mom_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_coriolis.F mom_v_coriolis.F; fi
if [ ! -L mom_v_del2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_del2v.F mom_v_del2v.F; fi
if [ ! -L mom_v_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_cylinder.F mom_v_metric_cylinder.F; fi
if [ ! -L mom_v_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_sphere.F mom_v_metric_sphere.F; fi
if [ ! -L mom_v_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_xviscflux.F mom_v_xviscflux.F; fi
if [ ! -L mom_v_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_yviscflux.F mom_v_yviscflux.F; fi
if [ ! -L mom_vecinv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vecinv.F mom_vecinv.F; fi
if [ ! -L mom_vi_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_coriolis.F mom_vi_coriolis.F; fi
if [ ! -L mom_vi_del2uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_del2uv.F mom_vi_del2uv.F; fi
if [ ! -L mom_vi_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_hdissip.F mom_vi_hdissip.F; fi
if [ ! -L mom_vi_u_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F mom_vi_u_coriolis_c4.F; fi
if [ ! -L mom_vi_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis.F mom_vi_u_coriolis.F; fi
if [ ! -L mom_vi_u_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_grad_ke.F mom_vi_u_grad_ke.F; fi
if [ ! -L mom_vi_u_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_vertshear.F mom_vi_u_vertshear.F; fi
if [ ! -L mom_vi_v_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F mom_vi_v_coriolis_c4.F; fi
if [ ! -L mom_vi_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis.F mom_vi_v_coriolis.F; fi
if [ ! -L mom_vi_v_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_grad_ke.F mom_vi_v_grad_ke.F; fi
if [ ! -L mom_vi_v_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_vertshear.F mom_vi_v_vertshear.F; fi
if [ ! -L mon_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcfl.F mon_advcfl.F; fi
if [ ! -L mon_advcflw2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw2.F mon_advcflw2.F; fi
if [ ! -L mon_advcflw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw.F mon_advcflw.F; fi
if [ ! -L mon_calc_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_advcfl.F mon_calc_advcfl.F; fi
if [ ! -L mon_calc_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rl.F mon_calc_stats_rl.F; fi
if [ ! -L mon_calc_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rs.F mon_calc_stats_rs.F; fi
if [ ! -L mon_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_init.F mon_init.F; fi
if [ ! -L monitor_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_ad.F monitor_ad.F; fi
if [ ! -L monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor.F monitor.F; fi
if [ ! -L monitor_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_g.F monitor_g.F; fi
if [ ! -L mon_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_ke.F mon_ke.F; fi
if [ ! -L mon_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_out.F mon_out.F; fi
if [ ! -L mon_printstats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rl.F mon_printstats_rl.F; fi
if [ ! -L mon_printstats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rs.F mon_printstats_rs.F; fi
if [ ! -L mon_set_iounit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_iounit.F mon_set_iounit.F; fi
if [ ! -L mon_set_pref.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_pref.F mon_set_pref.F; fi
if [ ! -L mon_solution.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_solution.F mon_solution.F; fi
if [ ! -L mon_stats_latbnd_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_latbnd_rl.F mon_stats_latbnd_rl.F; fi
if [ ! -L mon_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rl.F mon_stats_rl.F; fi
if [ ! -L mon_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rs.F mon_stats_rs.F; fi
if [ ! -L mon_surfcor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_surfcor.F mon_surfcor.F; fi
if [ ! -L mon_vort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_vort3.F mon_vort3.F; fi
if [ ! -L mon_writestats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rl.F mon_writestats_rl.F; fi
if [ ! -L mon_writestats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rs.F mon_writestats_rs.F; fi
if [ ! -L obcs_add_tides.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_add_tides.F obcs_add_tides.F; fi
if [ ! -L obcs_adjust.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust.F obcs_adjust.F; fi
if [ ! -L obcs_adjust_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust_uvice.F obcs_adjust_uvice.F; fi
if [ ! -L obcs_apply_eta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_eta.F obcs_apply_eta.F; fi
if [ ! -L obcs_apply_ptracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ptracer.F obcs_apply_ptracer.F; fi
if [ ! -L obcs_apply_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_r_star.F obcs_apply_r_star.F; fi
if [ ! -L obcs_apply_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_seaice.F obcs_apply_seaice.F; fi
if [ ! -L obcs_apply_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_surf_dr.F obcs_apply_surf_dr.F; fi
if [ ! -L obcs_apply_ts.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ts.F obcs_apply_ts.F; fi
if [ ! -L obcs_apply_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uv.F obcs_apply_uv.F; fi
if [ ! -L obcs_apply_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uvice.F obcs_apply_uvice.F; fi
if [ ! -L obcs_apply_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_w.F obcs_apply_w.F; fi
if [ ! -L obcs_balance_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_balance_flow.F obcs_balance_flow.F; fi
if [ ! -L obcs_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc.F obcs_calc.F; fi
if [ ! -L obcs_calc_stevens.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc_stevens.F obcs_calc_stevens.F; fi
if [ ! -L obcs_check_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check_depths.F obcs_check_depths.F; fi
if [ ! -L obcs_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check.F obcs_check.F; fi
if [ ! -L obcs_copy_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_tracer.F obcs_copy_tracer.F; fi
if [ ! -L obcs_copy_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_uv_n.F obcs_copy_uv_n.F; fi
if [ ! -L obcs_diag_balance.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_diag_balance.F obcs_diag_balance.F; fi
if [ ! -L obcs_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exchanges.F obcs_exchanges.F; fi
if [ ! -L obcs_exf_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exf_load.F obcs_exf_load.F; fi
if [ ! -L obcs_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_fields_load.F obcs_fields_load.F; fi
if [ ! -L obcs_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_fixed.F obcs_init_fixed.F; fi
if [ ! -L obcs_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_variables.F obcs_init_variables.F; fi
if [ ! -L obcs_monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_monitor.F obcs_monitor.F; fi
if [ ! -L obcs_mon_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_mon_stats.F obcs_mon_stats.F; fi
if [ ! -L obcs_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_output.F obcs_output.F; fi
if [ ! -L obcs_prescribe_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_prescribe_read.F obcs_prescribe_read.F; fi
if [ ! -L obcs_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_readparms.F obcs_readparms.F; fi
if [ ! -L obcs_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_read_pickup.F obcs_read_pickup.F; fi
if [ ! -L obcs_save_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_save_uv_n.F obcs_save_uv_n.F; fi
if [ ! -L obcs_seaice_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_seaice_sponge.F obcs_seaice_sponge.F; fi
if [ ! -L obcs_set_connect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_set_connect.F obcs_set_connect.F; fi
if [ ! -L obcs_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_sponge.F obcs_sponge.F; fi
if [ ! -L obcs_u1_adv_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_u1_adv_tracer.F obcs_u1_adv_tracer.F; fi
if [ ! -L obcs_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_write_pickup.F obcs_write_pickup.F; fi
if [ ! -L orlanski_east.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_east.F orlanski_east.F; fi
if [ ! -L orlanski_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_init.F orlanski_init.F; fi
if [ ! -L orlanski_north.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_north.F orlanski_north.F; fi
if [ ! -L orlanski_south.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_south.F orlanski_south.F; fi
if [ ! -L orlanski_west.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_west.F orlanski_west.F; fi
if [ ! -L get_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/get_write_global_fld.F get_write_global_fld.F; fi
if [ ! -L read_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rl.F read_fld_xy_rl.F; fi
if [ ! -L read_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rs.F read_fld_xy_rs.F; fi
if [ ! -L read_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rl.F read_fld_xyz_rl.F; fi
if [ ! -L read_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rs.F read_fld_xyz_rs.F; fi
if [ ! -L read_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rl.F read_glvec_rl.F; fi
if [ ! -L read_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rs.F read_glvec_rs.F; fi
if [ ! -L read_mflds.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_mflds.F read_mflds.F; fi
if [ ! -L read_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_rec.F read_rec.F; fi
if [ ! -L rw_get_suffix.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/rw_get_suffix.F rw_get_suffix.F; fi
if [ ! -L set_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/set_write_global_fld.F set_write_global_fld.F; fi
if [ ! -L write_fld_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rl.F write_fld_3d_rl.F; fi
if [ ! -L write_fld_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rs.F write_fld_3d_rs.F; fi
if [ ! -L write_fld_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rl.F write_fld_s3d_rl.F; fi
if [ ! -L write_fld_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rs.F write_fld_s3d_rs.F; fi
if [ ! -L write_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rl.F write_fld_xy_rl.F; fi
if [ ! -L write_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rs.F write_fld_xy_rs.F; fi
if [ ! -L write_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rl.F write_fld_xyz_rl.F; fi
if [ ! -L write_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rs.F write_fld_xyz_rs.F; fi
if [ ! -L write_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rl.F write_glvec_rl.F; fi
if [ ! -L write_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rs.F write_glvec_rs.F; fi
if [ ! -L write_local_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rl.F write_local_rl.F; fi
if [ ! -L write_local_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rs.F write_local_rs.F; fi
if [ ! -L write_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_rec.F write_rec.F; fi
if [ ! -L shelfice_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_check.F shelfice_check.F; fi
if [ ! -L shelfice_cost_accumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_accumulate.F shelfice_cost_accumulate.F; fi
if [ ! -L shelfice_cost_final.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_final.F shelfice_cost_final.F; fi
if [ ! -L shelfice_cost_shifwflx.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_shifwflx.F shelfice_cost_shifwflx.F; fi
if [ ! -L shelfice_diagnostics_drag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_diagnostics_drag.F shelfice_diagnostics_drag.F; fi
if [ ! -L shelfice_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing.F shelfice_forcing.F; fi
if [ ! -L shelfice_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing_surf.F shelfice_forcing_surf.F; fi
if [ ! -L shelfice_init_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_depths.F shelfice_init_depths.F; fi
if [ ! -L shelfice_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_fixed.F shelfice_init_fixed.F; fi
if [ ! -L shelfice_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_varia.F shelfice_init_varia.F; fi
if [ ! -L shelfice_mask_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mask_seaice.F shelfice_mask_seaice.F; fi
if [ ! -L shelfice_mnc_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mnc_init.F shelfice_mnc_init.F; fi
if [ ! -L shelfice_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_output.F shelfice_output.F; fi
if [ ! -L shelfice_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_readparms.F shelfice_readparms.F; fi
if [ ! -L shelfice_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_read_pickup.F shelfice_read_pickup.F; fi
if [ ! -L shelfice_remesh_calc_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_calc_w.F shelfice_remesh_calc_w.F; fi
if [ ! -L shelfice_remesh_c_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_c_mask.F shelfice_remesh_c_mask.F; fi
if [ ! -L shelfice_remeshing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remeshing.F shelfice_remeshing.F; fi
if [ ! -L shelfice_remesh_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_state.F shelfice_remesh_state.F; fi
if [ ! -L shelfice_remesh_uv_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_uv_mask.F shelfice_remesh_uv_mask.F; fi
if [ ! -L shelfice_step_icemass.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_step_icemass.F shelfice_step_icemass.F; fi
if [ ! -L shelfice_thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_thermodynamics.F shelfice_thermodynamics.F; fi
if [ ! -L shelfice_u_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_u_drag_coeff.F shelfice_u_drag_coeff.F; fi
if [ ! -L shelfice_v_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_v_drag_coeff.F shelfice_v_drag_coeff.F; fi
if [ ! -L shelfice_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_write_pickup.F shelfice_write_pickup.F; fi
if [ ! -L timeave_cumul_1k1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1k1t.F timeave_cumul_1k1t.F; fi
if [ ! -L timeave_cumul_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1t.F timeave_cumul_1t.F; fi
if [ ! -L timeave_cumul_1vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1vfc.F timeave_cumul_1vfc.F; fi
if [ ! -L timeave_cumul_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2v.F timeave_cumul_2v.F; fi
if [ ! -L timeave_cumul_2vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2vfc.F timeave_cumul_2vfc.F; fi
if [ ! -L timeave_cumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumulate.F timeave_cumulate.F; fi
if [ ! -L timeave_cumul_dif_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_dif_1t.F timeave_cumul_dif_1t.F; fi
if [ ! -L timeave_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_init_fixed.F timeave_init_fixed.F; fi
if [ ! -L timeave_norma_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_norma_2v.F timeave_norma_2v.F; fi
if [ ! -L timeave_normalize.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_normalize.F timeave_normalize.F; fi
if [ ! -L timeave_reset.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_reset.F timeave_reset.F; fi
if [ ! -L timeave_statvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statvars.F timeave_statvars.F; fi
if [ ! -L timeave_statv_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statv_write.F timeave_statv_write.F; fi
if [ ! -L timeave_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_surf_flux.F timeave_surf_flux.F; fi
if [ ! -L all_proc_die.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/all_proc_die.F all_proc_die.F; fi
if [ ! -L bar2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar2.F bar2.F; fi
if [ ! -L bar_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar_check.F bar_check.F; fi
if [ ! -L barrier.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/barrier.F barrier.F; fi
if [ ! -L check_threads.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/check_threads.F check_threads.F; fi
if [ ! -L comm_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/comm_stats.F comm_stats.F; fi
if [ ! -L cumulsum_z_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/cumulsum_z_tile.F cumulsum_z_tile.F; fi
if [ ! -L different_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/different_multiple.F different_multiple.F; fi
if [ ! -L diff_phase_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/diff_phase_multiple.F diff_phase_multiple.F; fi
if [ ! -L eeboot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeboot.F eeboot.F; fi
if [ ! -L eedata_example.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eedata_example.F eedata_example.F; fi
if [ ! -L eeintro_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeintro_msg.F eeintro_msg.F; fi
if [ ! -L eeset_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeset_parms.F eeset_parms.F; fi
if [ ! -L eewrite_eeenv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eewrite_eeenv.F eewrite_eeenv.F; fi
if [ ! -L exch0_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r4.F exch0_r4.F; fi
if [ ! -L exch0_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r8.F exch0_r8.F; fi
if [ ! -L exch0_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rl.F exch0_rl.F; fi
if [ ! -L exch0_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rs.F exch0_rs.F; fi
if [ ! -L exch1_bg_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r4_cube.F exch1_bg_r4_cube.F; fi
if [ ! -L exch1_bg_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r8_cube.F exch1_bg_r8_cube.F; fi
if [ ! -L exch1_bg_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rl_cube.F exch1_bg_rl_cube.F; fi
if [ ! -L exch1_bg_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rs_cube.F exch1_bg_rs_cube.F; fi
if [ ! -L exch1_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4_cube.F exch1_r4_cube.F; fi
if [ ! -L exch1_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4.F exch1_r4.F; fi
if [ ! -L exch1_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8_cube.F exch1_r8_cube.F; fi
if [ ! -L exch1_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8.F exch1_r8.F; fi
if [ ! -L exch1_rl_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_ad.F exch1_rl_ad.F; fi
if [ ! -L exch1_rl_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube_ad.F exch1_rl_cube_ad.F; fi
if [ ! -L exch1_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube.F exch1_rl_cube.F; fi
if [ ! -L exch1_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl.F exch1_rl.F; fi
if [ ! -L exch1_rs_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_ad.F exch1_rs_ad.F; fi
if [ ! -L exch1_rs_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube_ad.F exch1_rs_cube_ad.F; fi
if [ ! -L exch1_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube.F exch1_rs_cube.F; fi
if [ ! -L exch1_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs.F exch1_rs.F; fi
if [ ! -L exch1_uv_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r4_cube.F exch1_uv_r4_cube.F; fi
if [ ! -L exch1_uv_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r8_cube.F exch1_uv_r8_cube.F; fi
if [ ! -L exch1_uv_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rl_cube.F exch1_uv_rl_cube.F; fi
if [ ! -L exch1_uv_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rs_cube.F exch1_uv_rs_cube.F; fi
if [ ! -L exch1_z_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r4_cube.F exch1_z_r4_cube.F; fi
if [ ! -L exch1_z_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r8_cube.F exch1_z_r8_cube.F; fi
if [ ! -L exch1_z_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rl_cube.F exch1_z_rl_cube.F; fi
if [ ! -L exch1_z_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rs_cube.F exch1_z_rs_cube.F; fi
if [ ! -L exch_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r4.F exch_3d_r4.F; fi
if [ ! -L exch_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r8.F exch_3d_r8.F; fi
if [ ! -L exch_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rl.F exch_3d_rl.F; fi
if [ ! -L exch_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rs.F exch_3d_rs.F; fi
if [ ! -L exch_cycle_ebl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_cycle_ebl.F exch_cycle_ebl.F; fi
if [ ! -L exch_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_init.F exch_init.F; fi
if [ ! -L exch_r4_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_x.F exch_r4_recv_get_x.F; fi
if [ ! -L exch_r4_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_y.F exch_r4_recv_get_y.F; fi
if [ ! -L exch_r4_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_x.F exch_r4_send_put_x.F; fi
if [ ! -L exch_r4_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_y.F exch_r4_send_put_y.F; fi
if [ ! -L exch_r8_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_x.F exch_r8_recv_get_x.F; fi
if [ ! -L exch_r8_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_y.F exch_r8_recv_get_y.F; fi
if [ ! -L exch_r8_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_x.F exch_r8_send_put_x.F; fi
if [ ! -L exch_r8_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_y.F exch_r8_send_put_y.F; fi
if [ ! -L exch_rl_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_x.F exch_rl_recv_get_x.F; fi
if [ ! -L exch_rl_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_y.F exch_rl_recv_get_y.F; fi
if [ ! -L exch_rl_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_x.F exch_rl_send_put_x.F; fi
if [ ! -L exch_rl_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_y.F exch_rl_send_put_y.F; fi
if [ ! -L exch_rs_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_x.F exch_rs_recv_get_x.F; fi
if [ ! -L exch_rs_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_y.F exch_rs_recv_get_y.F; fi
if [ ! -L exch_rs_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_x.F exch_rs_send_put_x.F; fi
if [ ! -L exch_rs_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_y.F exch_rs_send_put_y.F; fi
if [ ! -L exch_s3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r4.F exch_s3d_r4.F; fi
if [ ! -L exch_s3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r8.F exch_s3d_r8.F; fi
if [ ! -L exch_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rl.F exch_s3d_rl.F; fi
if [ ! -L exch_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rs.F exch_s3d_rs.F; fi
if [ ! -L exch_sm_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r4.F exch_sm_3d_r4.F; fi
if [ ! -L exch_sm_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r8.F exch_sm_3d_r8.F; fi
if [ ! -L exch_sm_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rl.F exch_sm_3d_rl.F; fi
if [ ! -L exch_sm_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rs.F exch_sm_3d_rs.F; fi
if [ ! -L exch_uv_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r4.F exch_uv_3d_r4.F; fi
if [ ! -L exch_uv_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r8.F exch_uv_3d_r8.F; fi
if [ ! -L exch_uv_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rl.F exch_uv_3d_rl.F; fi
if [ ! -L exch_uv_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rs.F exch_uv_3d_rs.F; fi
if [ ! -L exch_uv_agrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r4.F; fi
if [ ! -L exch_uv_agrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_r8.F; fi
if [ ! -L exch_uv_agrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rl.F; fi
if [ ! -L exch_uv_agrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rs.F exch_uv_agrid_3d_rs.F; fi
if [ ! -L exch_uv_bgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r4.F; fi
if [ ! -L exch_uv_bgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_r8.F; fi
if [ ! -L exch_uv_bgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rl.F; fi
if [ ! -L exch_uv_bgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rs.F exch_uv_bgrid_3d_rs.F; fi
if [ ! -L exch_uv_dgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r4.F; fi
if [ ! -L exch_uv_dgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_r8.F; fi
if [ ! -L exch_uv_dgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rl.F; fi
if [ ! -L exch_uv_dgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rs.F exch_uv_dgrid_3d_rs.F; fi
if [ ! -L exch_uv_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r4.F exch_uv_xy_r4.F; fi
if [ ! -L exch_uv_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r8.F exch_uv_xy_r8.F; fi
if [ ! -L exch_uv_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rl.F exch_uv_xy_rl.F; fi
if [ ! -L exch_uv_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rs.F exch_uv_xy_rs.F; fi
if [ ! -L exch_uv_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r4.F exch_uv_xyz_r4.F; fi
if [ ! -L exch_uv_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r8.F exch_uv_xyz_r8.F; fi
if [ ! -L exch_uv_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rl.F exch_uv_xyz_rl.F; fi
if [ ! -L exch_uv_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rs.F exch_uv_xyz_rs.F; fi
if [ ! -L exch_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r4.F exch_xy_r4.F; fi
if [ ! -L exch_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r8.F exch_xy_r8.F; fi
if [ ! -L exch_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rl.F exch_xy_rl.F; fi
if [ ! -L exch_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rs.F exch_xy_rs.F; fi
if [ ! -L exch_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r4.F exch_xyz_r4.F; fi
if [ ! -L exch_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r8.F exch_xyz_r8.F; fi
if [ ! -L exch_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rl.F exch_xyz_rl.F; fi
if [ ! -L exch_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rs.F exch_xyz_rs.F; fi
if [ ! -L exch_z_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r4.F exch_z_3d_r4.F; fi
if [ ! -L exch_z_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r8.F exch_z_3d_r8.F; fi
if [ ! -L exch_z_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rl.F exch_z_3d_rl.F; fi
if [ ! -L exch_z_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rs.F exch_z_3d_rs.F; fi
if [ ! -L fill_cs_corner_ag_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_ag_rl.F fill_cs_corner_ag_rl.F; fi
if [ ! -L fill_cs_corner_tr_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_tr_rl.F fill_cs_corner_tr_rl.F; fi
if [ ! -L fill_cs_corner_uv_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rl.F fill_cs_corner_uv_rl.F; fi
if [ ! -L fill_cs_corner_uv_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rs.F fill_cs_corner_uv_rs.F; fi
if [ ! -L fool_the_compiler.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fool_the_compiler.F fool_the_compiler.F; fi
if [ ! -L gather_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r4.F gather_2d_r4.F; fi
if [ ! -L gather_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r8.F gather_2d_r8.F; fi
if [ ! -L gather_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r4.F gather_2d_wh_r4.F; fi
if [ ! -L gather_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r8.F gather_2d_wh_r8.F; fi
if [ ! -L gather_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r4.F gather_vec_r4.F; fi
if [ ! -L gather_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r8.F gather_vec_r8.F; fi
if [ ! -L gather_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_xz.F gather_xz.F; fi
if [ ! -L gather_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_yz.F gather_yz.F; fi
if [ ! -L get_periodic_interval.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/get_periodic_interval.F get_periodic_interval.F; fi
if [ ! -L global_max.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_max.F global_max.F; fi
if [ ! -L global_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum.F global_sum.F; fi
if [ ! -L global_sum_singlecpu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_singlecpu.F global_sum_singlecpu.F; fi
if [ ! -L global_sum_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_tile.F global_sum_tile.F; fi
if [ ! -L global_vec_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_vec_sum.F global_vec_sum.F; fi
if [ ! -L gsum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsum.F gsum.F; fi
if [ ! -L ini_communication_patterns.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_communication_patterns.F ini_communication_patterns.F; fi
if [ ! -L ini_procs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_procs.F ini_procs.F; fi
if [ ! -L ini_threading_environment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_threading_environment.F ini_threading_environment.F; fi
if [ ! -L lef_zero.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/lef_zero.F lef_zero.F; fi
if [ ! -L main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/main.F main.F; fi
if [ ! -L master_cpu_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_io.F master_cpu_io.F; fi
if [ ! -L master_cpu_thread.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_thread.F master_cpu_thread.F; fi
if [ ! -L mds_byteswapi4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapi4.F mds_byteswapi4.F; fi
if [ ! -L mds_byteswapr4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr4.F mds_byteswapr4.F; fi
if [ ! -L mds_byteswapr8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr8.F mds_byteswapr8.F; fi
if [ ! -L mdsfindunit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mdsfindunit.F mdsfindunit.F; fi
if [ ! -L mds_flush.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_flush.F mds_flush.F; fi
if [ ! -L mds_reclen.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_reclen.F mds_reclen.F; fi
if [ ! -L memsync.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/memsync.F memsync.F; fi
if [ ! -L nml_change_syntax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_change_syntax.F nml_change_syntax.F; fi
if [ ! -L nml_set_terminator.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_set_terminator.F nml_set_terminator.F; fi
if [ ! -L open_copy_data_file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/open_copy_data_file.F open_copy_data_file.F; fi
if [ ! -L print.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/print.F print.F; fi
if [ ! -L reset_halo.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/reset_halo.F reset_halo.F; fi
if [ ! -L scatter_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r4.F scatter_2d_r4.F; fi
if [ ! -L scatter_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r8.F scatter_2d_r8.F; fi
if [ ! -L scatter_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r4.F scatter_2d_wh_r4.F; fi
if [ ! -L scatter_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r8.F scatter_2d_wh_r8.F; fi
if [ ! -L scatter_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r4.F scatter_vec_r4.F; fi
if [ ! -L scatter_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r8.F scatter_vec_r8.F; fi
if [ ! -L scatter_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_xz.F scatter_xz.F; fi
if [ ! -L scatter_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_yz.F scatter_yz.F; fi
if [ ! -L stop_if_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/stop_if_error.F stop_if_error.F; fi
if [ ! -L timers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timers.F timers.F; fi
if [ ! -L utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/utils.F utils.F; fi
if [ ! -L write_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/write_utils.F write_utils.F; fi
if [ ! -L adams_bashforth2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth2.F adams_bashforth2.F; fi
if [ ! -L adams_bashforth3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth3.F adams_bashforth3.F; fi
if [ ! -L add_walls2masks.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/add_walls2masks.F add_walls2masks.F; fi
if [ ! -L apply_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/apply_forcing.F apply_forcing.F; fi
if [ ! -L calc_3d_diffusivity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_3d_diffusivity.F calc_3d_diffusivity.F; fi
if [ ! -L calc_adv_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_adv_flow.F calc_adv_flow.F; fi
if [ ! -L calc_div_ghat.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_div_ghat.F calc_div_ghat.F; fi
if [ ! -L calc_eddy_stress.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_eddy_stress.F calc_eddy_stress.F; fi
if [ ! -L calc_grad_phi_fv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_fv.F calc_grad_phi_fv.F; fi
if [ ! -L calc_grad_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_hyd.F calc_grad_phi_hyd.F; fi
if [ ! -L calc_grad_phi_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_surf.F calc_grad_phi_surf.F; fi
if [ ! -L calc_grid_angles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grid_angles.F calc_grid_angles.F; fi
if [ ! -L calc_gw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_gw.F calc_gw.F; fi
if [ ! -L calc_ivdc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_ivdc.F calc_ivdc.F; fi
if [ ! -L calc_oce_mxlayer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_oce_mxlayer.F calc_oce_mxlayer.F; fi
if [ ! -L calc_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_phi_hyd.F calc_phi_hyd.F; fi
if [ ! -L calc_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_r_star.F calc_r_star.F; fi
if [ ! -L calc_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_surf_dr.F calc_surf_dr.F; fi
if [ ! -L calc_viscosity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_viscosity.F calc_viscosity.F; fi
if [ ! -L calc_wsurf_tr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_wsurf_tr.F calc_wsurf_tr.F; fi
if [ ! -L cg2d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_ex0.F cg2d_ex0.F; fi
if [ ! -L cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d.F cg2d.F; fi
if [ ! -L cg2d_nsa.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_nsa.F cg2d_nsa.F; fi
if [ ! -L cg2d_sr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_sr.F cg2d_sr.F; fi
if [ ! -L cg3d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d_ex0.F cg3d_ex0.F; fi
if [ ! -L cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d.F cg3d.F; fi
if [ ! -L check_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/check_pickup.F check_pickup.F; fi
if [ ! -L config_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_check.F config_check.F; fi
if [ ! -L config_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_summary.F config_summary.F; fi
if [ ! -L convective_adjustment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment.F convective_adjustment.F; fi
if [ ! -L convective_adjustment_ini.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment_ini.F convective_adjustment_ini.F; fi
if [ ! -L convectively_mixtracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convectively_mixtracer.F convectively_mixtracer.F; fi
if [ ! -L convective_weights.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_weights.F convective_weights.F; fi
if [ ! -L correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/correction_step.F correction_step.F; fi
if [ ! -L cycle_ab_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_ab_tracer.F cycle_ab_tracer.F; fi
if [ ! -L cycle_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_tracer.F cycle_tracer.F; fi
if [ ! -L diags_oceanic_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_oceanic_surf_flux.F diags_oceanic_surf_flux.F; fi
if [ ! -L diags_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_hyd.F diags_phi_hyd.F; fi
if [ ! -L diags_phi_rlow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_rlow.F diags_phi_rlow.F; fi
if [ ! -L diags_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_rho.F diags_rho.F; fi
if [ ! -L diags_sound_speed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_sound_speed.F diags_sound_speed.F; fi
if [ ! -L do_atmospheric_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_atmospheric_phys.F do_atmospheric_phys.F; fi
if [ ! -L do_fields_blocking_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_fields_blocking_exchanges.F do_fields_blocking_exchanges.F; fi
if [ ! -L do_stagger_fields_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_stagger_fields_exchanges.F do_stagger_fields_exchanges.F; fi
if [ ! -L do_statevars_diags.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_diags.F do_statevars_diags.F; fi
if [ ! -L do_statevars_tave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_tave.F do_statevars_tave.F; fi
if [ ! -L do_the_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_the_model_io.F do_the_model_io.F; fi
if [ ! -L do_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_write_pickup.F do_write_pickup.F; fi
if [ ! -L dynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/dynamics.F dynamics.F; fi
if [ ! -L external_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_fields_load.F external_fields_load.F; fi
if [ ! -L external_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing.F external_forcing.F; fi
if [ ! -L external_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing_surf.F external_forcing_surf.F; fi
if [ ! -L find_alpha.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_alpha.F find_alpha.F; fi
if [ ! -L find_hyd_press_1d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_hyd_press_1d.F find_hyd_press_1d.F; fi
if [ ! -L find_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_rho.F find_rho.F; fi
if [ ! -L forcing_surf_relax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forcing_surf_relax.F forcing_surf_relax.F; fi
if [ ! -L forward_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forward_step.F forward_step.F; fi
if [ ! -L freesurf_rescale_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freesurf_rescale_g.F freesurf_rescale_g.F; fi
if [ ! -L freeze_surface.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freeze_surface.F freeze_surface.F; fi
if [ ! -L grad_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/grad_sigma.F grad_sigma.F; fi
if [ ! -L gsw_teos10.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/gsw_teos10.F gsw_teos10.F; fi
if [ ! -L impldiff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/impldiff.F impldiff.F; fi
if [ ! -L ini_cartesian_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cartesian_grid.F ini_cartesian_grid.F; fi
if [ ! -L ini_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg2d.F ini_cg2d.F; fi
if [ ! -L ini_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg3d.F ini_cg3d.F; fi
if [ ! -L ini_cori.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cori.F ini_cori.F; fi
if [ ! -L ini_curvilinear_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_curvilinear_grid.F ini_curvilinear_grid.F; fi
if [ ! -L ini_cylinder_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cylinder_grid.F ini_cylinder_grid.F; fi
if [ ! -L ini_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_depths.F ini_depths.F; fi
if [ ! -L ini_dynvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_dynvars.F ini_dynvars.F; fi
if [ ! -L ini_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_eos.F ini_eos.F; fi
if [ ! -L ini_ffields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_ffields.F ini_ffields.F; fi
if [ ! -L ini_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_fields.F ini_fields.F; fi
if [ ! -L ini_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_forcing.F ini_forcing.F; fi
if [ ! -L ini_global_domain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_global_domain.F ini_global_domain.F; fi
if [ ! -L ini_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_grid.F ini_grid.F; fi
if [ ! -L ini_linear_phisurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_linear_phisurf.F ini_linear_phisurf.F; fi
if [ ! -L ini_local_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_local_grid.F ini_local_grid.F; fi
if [ ! -L ini_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_masks_etc.F ini_masks_etc.F; fi
if [ ! -L ini_mixing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mixing.F ini_mixing.F; fi
if [ ! -L ini_mnc_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mnc_vars.F ini_mnc_vars.F; fi
if [ ! -L ini_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_model_io.F ini_model_io.F; fi
if [ ! -L ini_nh_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_fields.F ini_nh_fields.F; fi
if [ ! -L ini_nh_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_vars.F ini_nh_vars.F; fi
if [ ! -L ini_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nlfs_vars.F ini_nlfs_vars.F; fi
if [ ! -L ini_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_parms.F ini_parms.F; fi
if [ ! -L ini_p_ground.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_p_ground.F ini_p_ground.F; fi
if [ ! -L ini_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_pressure.F ini_pressure.F; fi
if [ ! -L ini_psurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_psurf.F ini_psurf.F; fi
if [ ! -L ini_salt.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_salt.F ini_salt.F; fi
if [ ! -L ini_sigma_hfac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_sigma_hfac.F ini_sigma_hfac.F; fi
if [ ! -L ini_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_spherical_polar_grid.F ini_spherical_polar_grid.F; fi
if [ ! -L ini_theta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_theta.F ini_theta.F; fi
if [ ! -L initialise_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_fixed.F initialise_fixed.F; fi
if [ ! -L initialise_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_varia.F initialise_varia.F; fi
if [ ! -L ini_vel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vel.F ini_vel.F; fi
if [ ! -L ini_vertical_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vertical_grid.F ini_vertical_grid.F; fi
if [ ! -L integrate_for_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integrate_for_w.F integrate_for_w.F; fi
if [ ! -L integr_continuity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integr_continuity.F integr_continuity.F; fi
if [ ! -L load_fields_driver.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_fields_driver.F load_fields_driver.F; fi
if [ ! -L load_grid_spacing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_grid_spacing.F load_grid_spacing.F; fi
if [ ! -L load_ref_files.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_ref_files.F load_ref_files.F; fi
if [ ! -L main_do_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/main_do_loop.F main_do_loop.F; fi
if [ ! -L momentum_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/momentum_correction_step.F momentum_correction_step.F; fi
if [ ! -L packages_boot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_boot.F packages_boot.F; fi
if [ ! -L packages_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_check.F packages_check.F; fi
if [ ! -L packages_error_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_error_msg.F packages_error_msg.F; fi
if [ ! -L packages_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_fixed.F packages_init_fixed.F; fi
if [ ! -L packages_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_variables.F packages_init_variables.F; fi
if [ ! -L packages_print_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_print_msg.F packages_print_msg.F; fi
if [ ! -L packages_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_readparms.F packages_readparms.F; fi
if [ ! -L packages_unused_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_unused_msg.F packages_unused_msg.F; fi
if [ ! -L packages_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_write_pickup.F packages_write_pickup.F; fi
if [ ! -L plot_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/plot_field.F plot_field.F; fi
if [ ! -L port_rand.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/port_rand.F port_rand.F; fi
if [ ! -L post_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/post_cg3d.F post_cg3d.F; fi
if [ ! -L pre_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pre_cg3d.F pre_cg3d.F; fi
if [ ! -L pressure_for_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pressure_for_eos.F pressure_for_eos.F; fi
if [ ! -L read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/read_pickup.F read_pickup.F; fi
if [ ! -L remove_mean.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/remove_mean.F remove_mean.F; fi
if [ ! -L reset_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/reset_nlfs_vars.F reset_nlfs_vars.F; fi
if [ ! -L rotate_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_spherical_polar_grid.F rotate_spherical_polar_grid.F; fi
if [ ! -L rotate_uv2en.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_uv2en.F rotate_uv2en.F; fi
if [ ! -L salt_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/salt_integrate.F salt_integrate.F; fi
if [ ! -L seawater.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/seawater.F seawater.F; fi
if [ ! -L set_defaults.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_defaults.F set_defaults.F; fi
if [ ! -L set_grid_factors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_grid_factors.F set_grid_factors.F; fi
if [ ! -L set_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_parms.F set_parms.F; fi
if [ ! -L set_ref_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_ref_state.F set_ref_state.F; fi
if [ ! -L solve_for_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_for_pressure.F solve_for_pressure.F; fi
if [ ! -L solve_pentadiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_pentadiagonal.F solve_pentadiagonal.F; fi
if [ ! -L solve_tridiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_tridiagonal.F solve_tridiagonal.F; fi
if [ ! -L solve_uv_tridiago.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_uv_tridiago.F solve_uv_tridiago.F; fi
if [ ! -L state_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/state_summary.F state_summary.F; fi
if [ ! -L swfrac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/swfrac.F swfrac.F; fi
if [ ! -L taueddy_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_init_varia.F taueddy_init_varia.F; fi
if [ ! -L taueddy_tendency_apply.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_tendency_apply.F taueddy_tendency_apply.F; fi
if [ ! -L temp_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/temp_integrate.F temp_integrate.F; fi
if [ ! -L the_main_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_main_loop.F the_main_loop.F; fi
if [ ! -L the_model_main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_model_main.F the_model_main.F; fi
if [ ! -L thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/thermodynamics.F thermodynamics.F; fi
if [ ! -L timestep.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep.F timestep.F; fi
if [ ! -L timestep_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_tracer.F timestep_tracer.F; fi
if [ ! -L timestep_wvel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_wvel.F timestep_wvel.F; fi
if [ ! -L tracers_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_correction_step.F tracers_correction_step.F; fi
if [ ! -L tracers_iigw_correction.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_iigw_correction.F tracers_iigw_correction.F; fi
if [ ! -L turnoff_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/turnoff_model_io.F turnoff_model_io.F; fi
if [ ! -L update_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_cg2d.F update_cg2d.F; fi
if [ ! -L update_etah.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etah.F update_etah.F; fi
if [ ! -L update_etaws.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etaws.F update_etaws.F; fi
if [ ! -L update_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_masks_etc.F update_masks_etc.F; fi
if [ ! -L update_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_r_star.F update_r_star.F; fi
if [ ! -L update_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_sigma.F update_sigma.F; fi
if [ ! -L update_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_surf_dr.F update_surf_dr.F; fi
if [ ! -L write_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_grid.F write_grid.F; fi
if [ ! -L write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_pickup.F write_pickup.F; fi
if [ ! -L write_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_state.F write_state.F; fi
if [ ! -L gsl_ieee_env.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsl_ieee_env.c gsl_ieee_env.c; fi
if [ ! -L ptwrapper.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ptwrapper.c ptwrapper.c; fi
if [ ! -L setdir.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setdir.c setdir.c; fi
if [ ! -L setrlstk.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setrlstk.c setrlstk.c; fi
if [ ! -L sigreg.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/sigreg.c sigreg.c; fi
if [ ! -L tim.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/tim.c tim.c; fi
if [ ! -L timer_stats.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timer_stats.c timer_stats.c; fi
if [ ! -L CPP_EEOPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h CPP_EEOPTIONS.h; fi
if [ ! -L SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/SIZE.h SIZE.h; fi
if [ ! -L DEBUG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/DEBUG_OPTIONS.h DEBUG_OPTIONS.h; fi
if [ ! -L DIAGNOSTICS_CALC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_CALC.h DIAGNOSTICS_CALC.h; fi
if [ ! -L DIAGNOSTICS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS.h DIAGNOSTICS.h; fi
if [ ! -L DIAGNOSTICS_SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_SIZE.h DIAGNOSTICS_SIZE.h; fi
if [ ! -L DIAG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAG_OPTIONS.h DIAG_OPTIONS.h; fi
if [ ! -L DIAGSTATS_REGIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGSTATS_REGIONS.h DIAGSTATS_REGIONS.h; fi
if [ ! -L gad_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev1_dir.h gad_ad_check_lev1_dir.h; fi
if [ ! -L gad_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev2_dir.h gad_ad_check_lev2_dir.h; fi
if [ ! -L gad_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev3_dir.h gad_ad_check_lev3_dir.h; fi
if [ ! -L gad_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev4_dir.h gad_ad_check_lev4_dir.h; fi
if [ ! -L GAD_FLUX_LIMITER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_FLUX_LIMITER.h GAD_FLUX_LIMITER.h; fi
if [ ! -L GAD.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD.h GAD.h; fi
if [ ! -L GAD_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_OPTIONS.h GAD_OPTIONS.h; fi
if [ ! -L GAD_SOM_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_SOM_VARS.h GAD_SOM_VARS.h; fi
if [ ! -L MDSIO_BUFF_3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_3D.h MDSIO_BUFF_3D.h; fi
if [ ! -L MDSIO_BUFF_WH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_WH.h MDSIO_BUFF_WH.h; fi
if [ ! -L MDSIO_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_OPTIONS.h MDSIO_OPTIONS.h; fi
if [ ! -L MOM_COMMON_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_COMMON_OPTIONS.h MOM_COMMON_OPTIONS.h; fi
if [ ! -L MOM_VISC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_VISC.h MOM_VISC.h; fi
if [ ! -L MOM_FLUXFORM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM.h MOM_FLUXFORM.h; fi
if [ ! -L MOM_FLUXFORM_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MOM_FLUXFORM_OPTIONS.h; fi
if [ ! -L MOM_VECINV_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MOM_VECINV_OPTIONS.h; fi
if [ ! -L MONITOR.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR.h MONITOR.h; fi
if [ ! -L MONITOR_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR_OPTIONS.h MONITOR_OPTIONS.h; fi
if [ ! -L obcs_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev1_dir.h obcs_ad_check_lev1_dir.h; fi
if [ ! -L obcs_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev2_dir.h obcs_ad_check_lev2_dir.h; fi
if [ ! -L obcs_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev3_dir.h obcs_ad_check_lev3_dir.h; fi
if [ ! -L obcs_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev4_dir.h obcs_ad_check_lev4_dir.h; fi
if [ ! -L OBCS_FIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_FIELDS.h OBCS_FIELDS.h; fi
if [ ! -L OBCS_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_GRID.h OBCS_GRID.h; fi
if [ ! -L OBCS_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_OPTIONS.h OBCS_OPTIONS.h; fi
if [ ! -L OBCS_PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PARAMS.h OBCS_PARAMS.h; fi
if [ ! -L OBCS_PTRACERS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PTRACERS.h OBCS_PTRACERS.h; fi
if [ ! -L OBCS_SEAICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_SEAICE.h OBCS_SEAICE.h; fi
if [ ! -L ORLANSKI.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/ORLANSKI.h ORLANSKI.h; fi
if [ ! -L RW_MFLDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_MFLDS.h RW_MFLDS.h; fi
if [ ! -L RW_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_OPTIONS.h RW_OPTIONS.h; fi
if [ ! -L shelfice_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev1_dir.h shelfice_ad_check_lev1_dir.h; fi
if [ ! -L shelfice_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev2_dir.h shelfice_ad_check_lev2_dir.h; fi
if [ ! -L shelfice_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev3_dir.h shelfice_ad_check_lev3_dir.h; fi
if [ ! -L shelfice_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev4_dir.h shelfice_ad_check_lev4_dir.h; fi
if [ ! -L SHELFICE_COST.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_COST.h SHELFICE_COST.h; fi
if [ ! -L SHELFICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE.h SHELFICE.h; fi
if [ ! -L SHELFICE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_OPTIONS.h SHELFICE_OPTIONS.h; fi
if [ ! -L SHELFICE_TAVE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_TAVE.h SHELFICE_TAVE.h; fi
if [ ! -L TIMEAVE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_OPTIONS.h TIMEAVE_OPTIONS.h; fi
if [ ! -L TIMEAVE_STATV.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_STATV.h TIMEAVE_STATV.h; fi
if [ ! -L cmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_c.h cmumps_c.h; fi
if [ ! -L cmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_root.h cmumps_root.h; fi
if [ ! -L cmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_struc.h cmumps_struc.h; fi
if [ ! -L dmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_c.h dmumps_c.h; fi
if [ ! -L dmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_root.h dmumps_root.h; fi
if [ ! -L dmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_struc.h dmumps_struc.h; fi
if [ ! -L gklib_defs.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_defs.h gklib_defs.h; fi
if [ ! -L gklib_rename.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_rename.h gklib_rename.h; fi
if [ ! -L gklib_tls.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_tls.h gklib_tls.h; fi
if [ ! -L metis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/metis.h metis.h; fi
if [ ! -L mpicxx.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpicxx.h mpicxx.h; fi
if [ ! -L mpif.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpif.h mpif.h; fi
if [ ! -L mpi.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi.h mpi.h; fi
if [ ! -L mpiof.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpiof.h mpiof.h; fi
if [ ! -L mpio.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpio.h mpio.h; fi
if [ ! -L mpi_proto.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi_proto.h mpi_proto.h; fi
if [ ! -L mumps_compat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_compat.h mumps_compat.h; fi
if [ ! -L mumps_c_types.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_c_types.h mumps_c_types.h; fi
if [ ! -L mumps_int_def.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_int_def.h mumps_int_def.h; fi
if [ ! -L parmetis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/parmetis.h parmetis.h; fi
if [ ! -L petscao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscao.h petscao.h; fi
if [ ! -L petscbag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbag.h petscbag.h; fi
if [ ! -L petscblaslapack.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack.h petscblaslapack.h; fi
if [ ! -L petscblaslapack_mangle.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack_mangle.h petscblaslapack_mangle.h; fi
if [ ! -L petscbm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbm.h petscbm.h; fi
if [ ! -L petscbt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbt.h petscbt.h; fi
if [ ! -L petsccharacteristic.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccharacteristic.h petsccharacteristic.h; fi
if [ ! -L petscconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf.h petscconf.h; fi
if [ ! -L petscconfiginfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconfiginfo.h petscconfiginfo.h; fi
if [ ! -L petscconf_poison.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf_poison.h petscconf_poison.h; fi
if [ ! -L petscconvest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconvest.h petscconvest.h; fi
if [ ! -L petsccxxcomplexfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccxxcomplexfix.h petsccxxcomplexfix.h; fi
if [ ! -L petscdevice_cuda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cuda.h petscdevice_cuda.h; fi
if [ ! -L petscdevice_cupm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cupm.h petscdevice_cupm.h; fi
if [ ! -L petscdevice.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice.h petscdevice.h; fi
if [ ! -L petscdevice_hip.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_hip.h petscdevice_hip.h; fi
if [ ! -L petscdevicetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevicetypes.h petscdevicetypes.h; fi
if [ ! -L petscdmadaptor.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptor.h petscdmadaptor.h; fi
if [ ! -L petscdmadaptortypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptortypes.h petscdmadaptortypes.h; fi
if [ ! -L petscdmceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmceed.h petscdmceed.h; fi
if [ ! -L petscdmcomposite.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmcomposite.h petscdmcomposite.h; fi
if [ ! -L petscdmda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmda.h petscdmda.h; fi
if [ ! -L petscdmdatypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmdatypes.h petscdmdatypes.h; fi
if [ ! -L petscdmfield.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmfield.h petscdmfield.h; fi
if [ ! -L petscdmforest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmforest.h petscdmforest.h; fi
if [ ! -L petscdm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdm.h petscdm.h; fi
if [ ! -L petscdmlabelephemeral.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabelephemeral.h petscdmlabelephemeral.h; fi
if [ ! -L petscdmlabel.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabel.h petscdmlabel.h; fi
if [ ! -L petscdmlabeltypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabeltypes.h petscdmlabeltypes.h; fi
if [ ! -L petscdmmoab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmmoab.h petscdmmoab.h; fi
if [ ! -L petscdmnetwork.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmnetwork.h petscdmnetwork.h; fi
if [ ! -L petscdmpatch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmpatch.h petscdmpatch.h; fi
if [ ! -L petscdmplexceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexceed.h petscdmplexceed.h; fi
if [ ! -L petscdmplexegads.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexegads.h petscdmplexegads.h; fi
if [ ! -L petscdmplex.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplex.h petscdmplex.h; fi
if [ ! -L petscdmplextransform.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransform.h petscdmplextransform.h; fi
if [ ! -L petscdmplextransformtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransformtypes.h petscdmplextransformtypes.h; fi
if [ ! -L petscdmplextypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextypes.h petscdmplextypes.h; fi
if [ ! -L petscdmproduct.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmproduct.h petscdmproduct.h; fi
if [ ! -L petscdmredundant.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmredundant.h petscdmredundant.h; fi
if [ ! -L petscdmshell.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmshell.h petscdmshell.h; fi
if [ ! -L petscdmsliced.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmsliced.h petscdmsliced.h; fi
if [ ! -L petscdmstag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmstag.h petscdmstag.h; fi
if [ ! -L petscdmswarm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmswarm.h petscdmswarm.h; fi
if [ ! -L petscdmtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmtypes.h petscdmtypes.h; fi
if [ ! -L petscdraw.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdraw.h petscdraw.h; fi
if [ ! -L petscdrawtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdrawtypes.h petscdrawtypes.h; fi
if [ ! -L petscds.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscds.h petscds.h; fi
if [ ! -L petscdstypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdstypes.h petscdstypes.h; fi
if [ ! -L petscdt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdt.h petscdt.h; fi
if [ ! -L petscdualspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdualspace.h petscdualspace.h; fi
if [ ! -L petscerror.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscerror.h petscerror.h; fi
if [ ! -L petscfeceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfeceed.h petscfeceed.h; fi
if [ ! -L petscfe.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfe.h petscfe.h; fi
if [ ! -L petscfetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfetypes.h petscfetypes.h; fi
if [ ! -L petscfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfix.h petscfix.h; fi
if [ ! -L petscfvceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvceed.h petscfvceed.h; fi
if [ ! -L petscfv.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfv.h petscfv.h; fi
if [ ! -L petscfvtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvtypes.h petscfvtypes.h; fi
if [ ! -L petsc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsc.h petsc.h; fi
if [ ! -L petscis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscis.h petscis.h; fi
if [ ! -L petscistypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscistypes.h petscistypes.h; fi
if [ ! -L petscksp.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscksp.h petscksp.h; fi
if [ ! -L petsclandau.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclandau.h petsclandau.h; fi
if [ ! -L petsclayouthdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclayouthdf5.h petsclayouthdf5.h; fi
if [ ! -L petsclogdeprecated.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogdeprecated.h petsclogdeprecated.h; fi
if [ ! -L petsclog.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclog.h petsclog.h; fi
if [ ! -L petsclogtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogtypes.h petsclogtypes.h; fi
if [ ! -L petscmachineinfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmachineinfo.h petscmachineinfo.h; fi
if [ ! -L petscmacros.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmacros.h petscmacros.h; fi
if [ ! -L petscmatcoarsen.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatcoarsen.h petscmatcoarsen.h; fi
if [ ! -L petscmatelemental.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatelemental.h petscmatelemental.h; fi
if [ ! -L petscmat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmat.h petscmat.h; fi
if [ ! -L petscmath.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmath.h petscmath.h; fi
if [ ! -L petscmathtool.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathtool.h petscmathtool.h; fi
if [ ! -L petscmathypre.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathypre.h petscmathypre.h; fi
if [ ! -L petscmatlab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatlab.h petscmatlab.h; fi
if [ ! -L petscoptions.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscoptions.h petscoptions.h; fi
if [ ! -L petscpartitioner.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpartitioner.h petscpartitioner.h; fi
if [ ! -L petscpc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpc.h petscpc.h; fi
if [ ! -L petscpctypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpctypes.h petscpctypes.h; fi
if [ ! -L petscpf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpf.h petscpf.h; fi
if [ ! -L petscpkg_version.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpkg_version.h petscpkg_version.h; fi
if [ ! -L petscsection.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsection.h petscsection.h; fi
if [ ! -L petscsectiontypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsectiontypes.h petscsectiontypes.h; fi
if [ ! -L petscsf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsf.h petscsf.h; fi
if [ ! -L petscsftypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsftypes.h petscsftypes.h; fi
if [ ! -L petscsnes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnes.h petscsnes.h; fi
if [ ! -L petscsnestypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnestypes.h petscsnestypes.h; fi
if [ ! -L petscspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscspace.h petscspace.h; fi
if [ ! -L petscstring.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscstring.h petscstring.h; fi
if [ ! -L petscsys.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsys.h petscsys.h; fi
if [ ! -L petscsystypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsystypes.h petscsystypes.h; fi
if [ ! -L petsctao_deprecations.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao_deprecations.h petsctao_deprecations.h; fi
if [ ! -L petsctao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao.h petsctao.h; fi
if [ ! -L petsctaolinesearch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctaolinesearch.h petsctaolinesearch.h; fi
if [ ! -L petsctime.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctime.h petsctime.h; fi
if [ ! -L petscts.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscts.h petscts.h; fi
if [ ! -L petscvec.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscvec.h petscvec.h; fi
if [ ! -L petscversion.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscversion.h petscversion.h; fi
if [ ! -L petscviennacl.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviennacl.h petscviennacl.h; fi
if [ ! -L petscviewerexodusii.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerexodusii.h petscviewerexodusii.h; fi
if [ ! -L petscviewer.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewer.h petscviewer.h; fi
if [ ! -L petscviewerhdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerhdf5.h petscviewerhdf5.h; fi
if [ ! -L petscviewersaws.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewersaws.h petscviewersaws.h; fi
if [ ! -L petscviewertypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewertypes.h petscviewertypes.h; fi
if [ ! -L petscwebclient.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscwebclient.h petscwebclient.h; fi
if [ ! -L smumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_c.h smumps_c.h; fi
if [ ! -L smumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_root.h smumps_root.h; fi
if [ ! -L smumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_struc.h smumps_struc.h; fi
if [ ! -L zconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zconf.h zconf.h; fi
if [ ! -L zlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zlib.h zlib.h; fi
if [ ! -L zmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_c.h zmumps_c.h; fi
if [ ! -L zmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_root.h zmumps_root.h; fi
if [ ! -L zmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_struc.h zmumps_struc.h; fi
if [ ! -L BAR2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BAR2.h BAR2.h; fi
if [ ! -L BARRIER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BARRIER.h BARRIER.h; fi
if [ ! -L CPP_EEMACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CPP_EEMACROS.h CPP_EEMACROS.h; fi
if [ ! -L CUMULSUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CUMULSUM.h CUMULSUM.h; fi
if [ ! -L DEF_IN_MAKEFILE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/DEF_IN_MAKEFILE.h DEF_IN_MAKEFILE.h; fi
if [ ! -L EEBUFF_SCPU.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEBUFF_SCPU.h EEBUFF_SCPU.h; fi
if [ ! -L EEPARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEPARAMS.h EEPARAMS.h; fi
if [ ! -L EESUPPORT.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EESUPPORT.h EESUPPORT.h; fi
if [ ! -L EXCH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EXCH.h EXCH.h; fi
if [ ! -L GLOBAL_MAX.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_MAX.h GLOBAL_MAX.h; fi
if [ ! -L GLOBAL_SUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_SUM.h GLOBAL_SUM.h; fi
if [ ! -L MAIN_PDIRECTIVES1.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES1.h MAIN_PDIRECTIVES1.h; fi
if [ ! -L MAIN_PDIRECTIVES2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES2.h MAIN_PDIRECTIVES2.h; fi
if [ ! -L MPI_INFO.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MPI_INFO.h MPI_INFO.h; fi
if [ ! -L SIGREG.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/SIGREG.h SIGREG.h; fi
if [ ! -L CG2D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG2D.h CG2D.h; fi
if [ ! -L CG3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG3D.h CG3D.h; fi
if [ ! -L CPP_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h CPP_OPTIONS.h; fi
if [ ! -L DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXC_MACROS.h DXC_MACROS.h; fi
if [ ! -L DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXF_MACROS.h DXF_MACROS.h; fi
if [ ! -L DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXG_MACROS.h DXG_MACROS.h; fi
if [ ! -L DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXV_MACROS.h DXV_MACROS.h; fi
if [ ! -L DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYC_MACROS.h DYC_MACROS.h; fi
if [ ! -L DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYF_MACROS.h DYF_MACROS.h; fi
if [ ! -L DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYG_MACROS.h DYG_MACROS.h; fi
if [ ! -L DYNVARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYNVARS.h DYNVARS.h; fi
if [ ! -L DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYU_MACROS.h DYU_MACROS.h; fi
if [ ! -L EOS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/EOS.h EOS.h; fi
if [ ! -L FCORI_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FCORI_MACROS.h FCORI_MACROS.h; fi
if [ ! -L FFIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FFIELDS.h FFIELDS.h; fi
if [ ! -L GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID.h GRID.h; fi
if [ ! -L GRID_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID_MACROS.h GRID_MACROS.h; fi
if [ ! -L HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACC_MACROS.h HFACC_MACROS.h; fi
if [ ! -L HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACS_MACROS.h HFACS_MACROS.h; fi
if [ ! -L HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACW_MACROS.h HFACW_MACROS.h; fi
if [ ! -L MASKS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKS_MACROS.h MASKS_MACROS.h; fi
if [ ! -L MASKW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKW_MACROS.h MASKW_MACROS.h; fi
if [ ! -L NH_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/NH_VARS.h NH_VARS.h; fi
if [ ! -L PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/PARAMS.h PARAMS.h; fi
if [ ! -L RA_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RA_MACROS.h RA_MACROS.h; fi
if [ ! -L RAS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAS_MACROS.h RAS_MACROS.h; fi
if [ ! -L RAW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAW_MACROS.h RAW_MACROS.h; fi
if [ ! -L RECIP_DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXC_MACROS.h RECIP_DXC_MACROS.h; fi
if [ ! -L RECIP_DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXF_MACROS.h RECIP_DXF_MACROS.h; fi
if [ ! -L RECIP_DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXG_MACROS.h RECIP_DXG_MACROS.h; fi
if [ ! -L RECIP_DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXV_MACROS.h RECIP_DXV_MACROS.h; fi
if [ ! -L RECIP_DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYC_MACROS.h RECIP_DYC_MACROS.h; fi
if [ ! -L RECIP_DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYF_MACROS.h RECIP_DYF_MACROS.h; fi
if [ ! -L RECIP_DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYG_MACROS.h RECIP_DYG_MACROS.h; fi
if [ ! -L RECIP_DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYU_MACROS.h RECIP_DYU_MACROS.h; fi
if [ ! -L RECIP_HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACC_MACROS.h RECIP_HFACC_MACROS.h; fi
if [ ! -L RECIP_HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACS_MACROS.h RECIP_HFACS_MACROS.h; fi
if [ ! -L RECIP_HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACW_MACROS.h RECIP_HFACW_MACROS.h; fi
if [ ! -L RESTART.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RESTART.h RESTART.h; fi
if [ ! -L SET_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SET_GRID.h SET_GRID.h; fi
if [ ! -L SOLVE_FOR_PRESSURE3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE3D.h SOLVE_FOR_PRESSURE3D.h; fi
if [ ! -L SOLVE_FOR_PRESSURE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE.h SOLVE_FOR_PRESSURE.h; fi
if [ ! -L SURFACE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SURFACE.h SURFACE.h; fi
if [ ! -L TANPHIATU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATU_MACROS.h TANPHIATU_MACROS.h; fi
if [ ! -L TANPHIATV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATV_MACROS.h TANPHIATV_MACROS.h; fi
if [ ! -L THE_MODEL_COMMON_BLOCKS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/THE_MODEL_COMMON_BLOCKS.h THE_MODEL_COMMON_BLOCKS.h; fi
if [ ! -L XC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/XC_MACROS.h XC_MACROS.h; fi
if [ ! -L YC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/YC_MACROS.h YC_MACROS.h; fi
Creating FC_NAMEMANGLE.h ...
echo "#define FC_NAMEMANGLE(X)  X ## _" &gt; FC_NAMEMANGLE.h
Creating BUILD_INFO.h ...
echo "#define THISVER 'checkpoint68i'" &gt; BUILD_INFO.h
echo "#define THISUSER 'jenkins'" &gt;&gt; BUILD_INFO.h
echo "#define THISDATE 'Wed Sep  3 10:43:26 AM PDT 2025'" &gt;&gt; BUILD_INFO.h
echo "#define THISHOST 'Debian-12-VM'" &gt;&gt; BUILD_INFO.h
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build'
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/xmakedepend -f Makefile -o .f -DWORDLENGTH=4 -DNML_TERMINATOR -DALLOW_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_ETIME_SBR -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -DHAVE_FLUSH  -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu -I/usr/include cpl_issm.F do_oceanic_phys.F eeboot_minimal.F eedie.F chksum_tiled.F debug_call.F debug_cs_corner_uv.F debug_enter.F debug_fld_stats_rl.F debug_fld_stats_rs.F debug_leave.F debug_msg.F debug_stats_rl.F debug_stats_rs.F fill_in_corners_rl.F write_fullarray_rl.F write_fullarray_rs.F diag_calc_psivel.F diag_cg2d.F diagnostics_addtolist.F diagnostics_calc_phivel.F diagnostics_check.F diagnostics_clear.F diagnostics_fill.F diagnostics_fill_field.F diagnostics_fill_rs.F diagnostics_fill_state.F diagnostics_fract_fill.F diagnostics_ini_io.F diagnostics_init_early.F diagnostics_init_fixed.F diagnostics_init_varia.F diagnostics_interp_p2p.F diagnostics_interp_vert.F diagnostics_is_on.F diagnostics_list_check.F diagnostics_main_init.F diagnostics_mnc_out.F diagnostics_out.F diagnostics_readparms.F diagnostics_read_pickup.F diagnostics_scale_fill.F diagnostics_scale_fill_rs.F diagnostics_set_calc.F diagnostics_setdiag.F diagnostics_set_levels.F diagnostics_set_pointers.F diagnostics_status_error.F diagnostics_sum_levels.F diagnostics_summary.F diagnostics_switch_onoff.F diagnostics_utils.F diagnostics_write_adj.F diagnostics_write.F diagnostics_write_pickup.F diagstats_ascii_out.F diagstats_calc.F diagstats_clear.F diagstats_close_io.F diagstats_fill.F diagstats_global.F diagstats_ini_io.F diagstats_local.F diagstats_mnc_out.F diagstats_others_calc.F diagstats_output.F diagstats_setdiag.F diagstats_set_pointers.F diagstats_set_regions.F diag_vegtile_fill.F gad_advection.F gad_advscheme.F gad_biharm_r.F gad_biharm_x.F gad_biharm_y.F gad_c2_adv_r.F gad_c2_adv_x.F gad_c2_adv_y.F gad_c2_impl_r.F gad_c4_adv_r.F gad_c4_adv_x.F gad_c4_adv_y.F gad_calc_rhs.F gad_check.F gad_del2.F gad_diagnostics_init.F gad_diagnostics_state.F gad_diff_r.F gad_diff_x.F gad_diff_y.F gad_dst2u1_adv_r.F gad_dst2u1_adv_x.F gad_dst2u1_adv_y.F gad_dst2u1_impl_r.F gad_dst3_adv_r.F gad_dst3_adv_x.F gad_dst3_adv_y.F gad_dst3fl_adv_r.F gad_dst3fl_adv_x.F gad_dst3fl_adv_y.F gad_dst3fl_impl_r.F gad_exch_som.F gad_fluxlimit_adv_r.F gad_fluxlimit_adv_x.F gad_fluxlimit_adv_y.F gad_fluxlimit_impl_r.F gad_grad_x.F gad_grad_y.F gad_implicit_r.F gad_init_fixed.F gad_init_varia.F gad_os7mp_adv_r.F gad_os7mp_adv_x.F gad_os7mp_adv_y.F gad_osc_hat_r.F gad_osc_hat_x.F gad_osc_hat_y.F gad_osc_mul_r.F gad_osc_mul_x.F gad_osc_mul_y.F gad_plm_fun.F gad_ppm_adv_r.F gad_ppm_adv_x.F gad_ppm_adv_y.F gad_ppm_flx_r.F gad_ppm_flx_x.F gad_ppm_flx_y.F gad_ppm_fun.F gad_ppm_hat_r.F gad_ppm_hat_x.F gad_ppm_hat_y.F gad_ppm_p3e_r.F gad_ppm_p3e_x.F gad_ppm_p3e_y.F gad_pqm_adv_r.F gad_pqm_adv_x.F gad_pqm_adv_y.F gad_pqm_flx_r.F gad_pqm_flx_x.F gad_pqm_flx_y.F gad_pqm_fun.F gad_pqm_hat_r.F gad_pqm_hat_x.F gad_pqm_hat_y.F gad_pqm_p5e_r.F gad_pqm_p5e_x.F gad_pqm_p5e_y.F gad_read_pickup.F gad_som_advect.F gad_som_adv_r.F gad_som_adv_x.F gad_som_adv_y.F gad_som_exchanges.F gad_som_fill_cs_corner.F gad_som_lim_r.F gad_som_prep_cs_corner.F gad_u3_adv_r.F gad_u3_adv_x.F gad_u3_adv_y.F gad_u3c4_impl_r.F gad_write_pickup.F salt_fill.F mdsio_buffertorl.F mdsio_buffertors.F mdsio_check4file.F mdsio_facef_read.F mdsio_gl.F mdsio_gl_slice.F mdsio_pass_r4torl.F mdsio_pass_r4tors.F mdsio_pass_r8torl.F mdsio_pass_r8tors.F mdsio_rd_rec_rl.F mdsio_rd_rec_rs.F mdsio_read_field.F mdsio_read_meta.F mdsio_read_section.F mdsio_read_tape.F mdsio_readvec_loc.F mdsio_read_whalos.F mdsio_rw_field.F mdsio_rw_slice.F mdsio_seg4torl.F mdsio_seg4tors.F mdsio_seg8torl.F mdsio_seg8tors.F mdsio_segxtorx_2d.F mdsio_write_field.F mdsio_writelocal.F mdsio_write_meta.F mdsio_write_section.F mdsio_write_tape.F mdsio_writevec_loc.F mdsio_write_whalos.F mdsio_wr_metafiles.F mdsio_wr_rec_rl.F mdsio_wr_rec_rs.F mom_calc_3d_strain.F mom_calc_absvort3.F mom_calc_hdiv.F mom_calc_hfacz.F mom_calc_ke.F mom_calc_relvort3.F mom_calc_smag_3d.F mom_calc_strain.F mom_calc_tension.F mom_calc_visc.F mom_diagnostics_init.F mom_hdissip.F mom_init_fixed.F mom_quasihydrostatic.F mom_u_botdrag_coeff.F mom_u_coriolis_nh.F mom_u_implicit_r.F mom_u_metric_nh.F mom_u_rviscflux.F mom_u_sidedrag.F mom_uv_smag_3d.F mom_v_botdrag_coeff.F mom_v_coriolis_nh.F mom_v_implicit_r.F mom_visc_qgl_limit.F mom_visc_qgl_stretch.F mom_v_metric_nh.F mom_v_rviscflux.F mom_v_sidedrag.F mom_w_coriolis_nh.F mom_w_metric_nh.F mom_w_sidedrag.F mom_w_smag_3d.F mom_calc_rtrans.F mom_fluxform.F mom_u_adv_uu.F mom_u_adv_vu.F mom_u_adv_wu.F mom_u_coriolis.F mom_u_del2u.F mom_u_metric_cylinder.F mom_u_metric_sphere.F mom_uv_boundary.F mom_u_xviscflux.F mom_u_yviscflux.F mom_v_adv_uv.F mom_v_adv_vv.F mom_v_adv_wv.F mom_v_coriolis.F mom_v_del2v.F mom_v_metric_cylinder.F mom_v_metric_sphere.F mom_v_xviscflux.F mom_v_yviscflux.F mom_vecinv.F mom_vi_coriolis.F mom_vi_del2uv.F mom_vi_hdissip.F mom_vi_u_coriolis_c4.F mom_vi_u_coriolis.F mom_vi_u_grad_ke.F mom_vi_u_vertshear.F mom_vi_v_coriolis_c4.F mom_vi_v_coriolis.F mom_vi_v_grad_ke.F mom_vi_v_vertshear.F mon_advcfl.F mon_advcflw2.F mon_advcflw.F mon_calc_advcfl.F mon_calc_stats_rl.F mon_calc_stats_rs.F mon_init.F monitor_ad.F monitor.F monitor_g.F mon_ke.F mon_out.F mon_printstats_rl.F mon_printstats_rs.F mon_set_iounit.F mon_set_pref.F mon_solution.F mon_stats_latbnd_rl.F mon_stats_rl.F mon_stats_rs.F mon_surfcor.F mon_vort3.F mon_writestats_rl.F mon_writestats_rs.F obcs_add_tides.F obcs_adjust.F obcs_adjust_uvice.F obcs_apply_eta.F obcs_apply_ptracer.F obcs_apply_r_star.F obcs_apply_seaice.F obcs_apply_surf_dr.F obcs_apply_ts.F obcs_apply_uv.F obcs_apply_uvice.F obcs_apply_w.F obcs_balance_flow.F obcs_calc.F obcs_calc_stevens.F obcs_check_depths.F obcs_check.F obcs_copy_tracer.F obcs_copy_uv_n.F obcs_diag_balance.F obcs_exchanges.F obcs_exf_load.F obcs_fields_load.F obcs_init_fixed.F obcs_init_variables.F obcs_monitor.F obcs_mon_stats.F obcs_output.F obcs_prescribe_read.F obcs_readparms.F obcs_read_pickup.F obcs_save_uv_n.F obcs_seaice_sponge.F obcs_set_connect.F obcs_sponge.F obcs_u1_adv_tracer.F obcs_write_pickup.F orlanski_east.F orlanski_init.F orlanski_north.F orlanski_south.F orlanski_west.F get_write_global_fld.F read_fld_xy_rl.F read_fld_xy_rs.F read_fld_xyz_rl.F read_fld_xyz_rs.F read_glvec_rl.F read_glvec_rs.F read_mflds.F read_rec.F rw_get_suffix.F set_write_global_fld.F write_fld_3d_rl.F write_fld_3d_rs.F write_fld_s3d_rl.F write_fld_s3d_rs.F write_fld_xy_rl.F write_fld_xy_rs.F write_fld_xyz_rl.F write_fld_xyz_rs.F write_glvec_rl.F write_glvec_rs.F write_local_rl.F write_local_rs.F write_rec.F shelfice_check.F shelfice_cost_accumulate.F shelfice_cost_final.F shelfice_cost_shifwflx.F shelfice_diagnostics_drag.F shelfice_forcing.F shelfice_forcing_surf.F shelfice_init_depths.F shelfice_init_fixed.F shelfice_init_varia.F shelfice_mask_seaice.F shelfice_mnc_init.F shelfice_output.F shelfice_readparms.F shelfice_read_pickup.F shelfice_remesh_calc_w.F shelfice_remesh_c_mask.F shelfice_remeshing.F shelfice_remesh_state.F shelfice_remesh_uv_mask.F shelfice_step_icemass.F shelfice_thermodynamics.F shelfice_u_drag_coeff.F shelfice_v_drag_coeff.F shelfice_write_pickup.F timeave_cumul_1k1t.F timeave_cumul_1t.F timeave_cumul_1vfc.F timeave_cumul_2v.F timeave_cumul_2vfc.F timeave_cumulate.F timeave_cumul_dif_1t.F timeave_init_fixed.F timeave_norma_2v.F timeave_normalize.F timeave_reset.F timeave_statvars.F timeave_statv_write.F timeave_surf_flux.F all_proc_die.F bar2.F bar_check.F barrier.F check_threads.F comm_stats.F cumulsum_z_tile.F different_multiple.F diff_phase_multiple.F eeboot.F eedata_example.F eeintro_msg.F eeset_parms.F eewrite_eeenv.F exch0_r4.F exch0_r8.F exch0_rl.F exch0_rs.F exch1_bg_r4_cube.F exch1_bg_r8_cube.F exch1_bg_rl_cube.F exch1_bg_rs_cube.F exch1_r4_cube.F exch1_r4.F exch1_r8_cube.F exch1_r8.F exch1_rl_ad.F exch1_rl_cube_ad.F exch1_rl_cube.F exch1_rl.F exch1_rs_ad.F exch1_rs_cube_ad.F exch1_rs_cube.F exch1_rs.F exch1_uv_r4_cube.F exch1_uv_r8_cube.F exch1_uv_rl_cube.F exch1_uv_rs_cube.F exch1_z_r4_cube.F exch1_z_r8_cube.F exch1_z_rl_cube.F exch1_z_rs_cube.F exch_3d_r4.F exch_3d_r8.F exch_3d_rl.F exch_3d_rs.F exch_cycle_ebl.F exch_init.F exch_r4_recv_get_x.F exch_r4_recv_get_y.F exch_r4_send_put_x.F exch_r4_send_put_y.F exch_r8_recv_get_x.F exch_r8_recv_get_y.F exch_r8_send_put_x.F exch_r8_send_put_y.F exch_rl_recv_get_x.F exch_rl_recv_get_y.F exch_rl_send_put_x.F exch_rl_send_put_y.F exch_rs_recv_get_x.F exch_rs_recv_get_y.F exch_rs_send_put_x.F exch_rs_send_put_y.F exch_s3d_r4.F exch_s3d_r8.F exch_s3d_rl.F exch_s3d_rs.F exch_sm_3d_r4.F exch_sm_3d_r8.F exch_sm_3d_rl.F exch_sm_3d_rs.F exch_uv_3d_r4.F exch_uv_3d_r8.F exch_uv_3d_rl.F exch_uv_3d_rs.F exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rs.F exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rs.F exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rs.F exch_uv_xy_r4.F exch_uv_xy_r8.F exch_uv_xy_rl.F exch_uv_xy_rs.F exch_uv_xyz_r4.F exch_uv_xyz_r8.F exch_uv_xyz_rl.F exch_uv_xyz_rs.F exch_xy_r4.F exch_xy_r8.F exch_xy_rl.F exch_xy_rs.F exch_xyz_r4.F exch_xyz_r8.F exch_xyz_rl.F exch_xyz_rs.F exch_z_3d_r4.F exch_z_3d_r8.F exch_z_3d_rl.F exch_z_3d_rs.F fill_cs_corner_ag_rl.F fill_cs_corner_tr_rl.F fill_cs_corner_uv_rl.F fill_cs_corner_uv_rs.F fool_the_compiler.F gather_2d_r4.F gather_2d_r8.F gather_2d_wh_r4.F gather_2d_wh_r8.F gather_vec_r4.F gather_vec_r8.F gather_xz.F gather_yz.F get_periodic_interval.F global_max.F global_sum.F global_sum_singlecpu.F global_sum_tile.F global_vec_sum.F gsum.F ini_communication_patterns.F ini_procs.F ini_threading_environment.F lef_zero.F main.F master_cpu_io.F master_cpu_thread.F mds_byteswapi4.F mds_byteswapr4.F mds_byteswapr8.F mdsfindunit.F mds_flush.F mds_reclen.F memsync.F nml_change_syntax.F nml_set_terminator.F open_copy_data_file.F print.F reset_halo.F scatter_2d_r4.F scatter_2d_r8.F scatter_2d_wh_r4.F scatter_2d_wh_r8.F scatter_vec_r4.F scatter_vec_r8.F scatter_xz.F scatter_yz.F stop_if_error.F timers.F utils.F write_utils.F adams_bashforth2.F adams_bashforth3.F add_walls2masks.F apply_forcing.F calc_3d_diffusivity.F calc_adv_flow.F calc_div_ghat.F calc_eddy_stress.F calc_grad_phi_fv.F calc_grad_phi_hyd.F calc_grad_phi_surf.F calc_grid_angles.F calc_gw.F calc_ivdc.F calc_oce_mxlayer.F calc_phi_hyd.F calc_r_star.F calc_surf_dr.F calc_viscosity.F calc_wsurf_tr.F cg2d_ex0.F cg2d.F cg2d_nsa.F cg2d_sr.F cg3d_ex0.F cg3d.F check_pickup.F config_check.F config_summary.F convective_adjustment.F convective_adjustment_ini.F convectively_mixtracer.F convective_weights.F correction_step.F cycle_ab_tracer.F cycle_tracer.F diags_oceanic_surf_flux.F diags_phi_hyd.F diags_phi_rlow.F diags_rho.F diags_sound_speed.F do_atmospheric_phys.F do_fields_blocking_exchanges.F do_stagger_fields_exchanges.F do_statevars_diags.F do_statevars_tave.F do_the_model_io.F do_write_pickup.F dynamics.F external_fields_load.F external_forcing.F external_forcing_surf.F find_alpha.F find_hyd_press_1d.F find_rho.F forcing_surf_relax.F forward_step.F freesurf_rescale_g.F freeze_surface.F grad_sigma.F gsw_teos10.F impldiff.F ini_cartesian_grid.F ini_cg2d.F ini_cg3d.F ini_cori.F ini_curvilinear_grid.F ini_cylinder_grid.F ini_depths.F ini_dynvars.F ini_eos.F ini_ffields.F ini_fields.F ini_forcing.F ini_global_domain.F ini_grid.F ini_linear_phisurf.F ini_local_grid.F ini_masks_etc.F ini_mixing.F ini_mnc_vars.F ini_model_io.F ini_nh_fields.F ini_nh_vars.F ini_nlfs_vars.F ini_parms.F ini_p_ground.F ini_pressure.F ini_psurf.F ini_salt.F ini_sigma_hfac.F ini_spherical_polar_grid.F ini_theta.F initialise_fixed.F initialise_varia.F ini_vel.F ini_vertical_grid.F integrate_for_w.F integr_continuity.F load_fields_driver.F load_grid_spacing.F load_ref_files.F main_do_loop.F momentum_correction_step.F packages_boot.F packages_check.F packages_error_msg.F packages_init_fixed.F packages_init_variables.F packages_print_msg.F packages_readparms.F packages_unused_msg.F packages_write_pickup.F plot_field.F port_rand.F post_cg3d.F pre_cg3d.F pressure_for_eos.F read_pickup.F remove_mean.F reset_nlfs_vars.F rotate_spherical_polar_grid.F rotate_uv2en.F salt_integrate.F seawater.F set_defaults.F set_grid_factors.F set_parms.F set_ref_state.F solve_for_pressure.F solve_pentadiagonal.F solve_tridiagonal.F solve_uv_tridiago.F state_summary.F swfrac.F taueddy_init_varia.F taueddy_tendency_apply.F temp_integrate.F the_main_loop.F the_model_main.F thermodynamics.F timestep.F timestep_tracer.F timestep_wvel.F tracers_correction_step.F tracers_iigw_correction.F turnoff_model_io.F update_cg2d.F update_etah.F update_etaws.F update_masks_etc.F update_r_star.F update_sigma.F update_surf_dr.F write_grid.F write_pickup.F write_state.F
Appending dependencies to Makefile
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/f90mkdepend &gt;&gt; Makefile
WARNING: f90mkdepend: no source file found for module a
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WARNING: f90mkdepend: no source file found for module `petsccount_fmt`
WARNING: f90mkdepend: no source file found for module of
WARNING: f90mkdepend: no source file found for module `tssettype()`
WARNING: f90mkdepend: no source file found for module `petscviewerfilesetmode()`
rm -f makedepend.out

[41;37m   step #6: RunUncoupledMITgcm   [0m

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[41;37m   step #7: CreateMesh   [0m

Info: creating coordinates in polar stereographic (Std Latitude: 71S Meridian: 0)
saving model as: Models/IceOcean.CreateMesh

[41;37m   step #8: MeshGeometry   [0m

saving model as: Models/IceOcean.MeshGeometry

[41;37m   step #9: ParameterizeIce   [0m

saving model as: Models/IceOcean.ParameterizeIce

[41;37m   step #10: RunUncoupledISSM   [0m

checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster
/home/jenkins/workspace/Debian_Linux-Ice-Ocean//etc/environment.sh: line 329: syntax error in conditional expression
loading results from cluster
cp: cannot stat '/home/jenkins/workspace/Debian_Linux-Ice-Ocean//execution/test4001-09-03-2025-10-46-10-2177023//test4001.outlog': No such file or directory
cp: cannot stat '/home/jenkins/workspace/Debian_Linux-Ice-Ocean//execution/test4001-09-03-2025-10-46-10-2177023//test4001.errlog': No such file or directory
cp: cannot stat '/home/jenkins/workspace/Debian_Linux-Ice-Ocean//execution/test4001-09-03-2025-10-46-10-2177023//test4001.outbin': No such file or directory
Error using loadresultsfromdisk

=========================================================================
   Binary file test4001.outbin not found

   This typically results from an error encountered during the simulation
   Please check for error messages above or in the outlog
=========================================================================


Error in loadresultsfromcluster (line 50)
md=loadresultsfromdisk(md,[md.miscellaneous.name '.outbin']);

Error in solve (line 180)
	md=loadresultsfromcluster(md);

Error in test4001 (line 556)
    md=solve(md,'Transient');

Error in run (line 99)
evalin('caller', strcat(script, ';'));

Error in runme (line 156)
		run(['test' num2str(id)]);

Error in matlab_run2 (line 3)
			runme('benchmark','all','id',[4001],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 4001 test name: IceOcean field: N/A
+++ exit code: 0
+++ error: 0

+++ Running case: MATLAB-4001 
+++ working dir: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/nightlylog

[41;37m   step #1: Parameters   [0m

saving data in: Models/IceOcean.Parameters

[41;37m   step #2: Bathymetry   [0m

saving data in: Models/IceOcean.Bathymetry

[41;37m   step #3: IceSheetGeometry   [0m

saving data in: Models/IceOcean.IceSheetGeometry

[41;37m   step #4: GetMITgcm   [0m

--2025-09-03 10:43:07--  <a href='https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz'>https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz</a>
Resolving github.com (github.com)... 140.82.116.3
Connecting to github.com (github.com)|140.82.116.3|:443... connected.
HTTP request sent, awaiting response... 302 Found
Location: <a href='https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i'>https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i</a> [following]
--2025-09-03 10:43:08--  <a href='https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i'>https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i</a>
Resolving codeload.github.com (codeload.github.com)... 140.82.116.9
Connecting to codeload.github.com (codeload.github.com)|140.82.116.9|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: unspecified [application/x-gzip]
Saving to: checkpoint68i.tar.gz

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2025-09-03 10:43:19 (14.9 MB/s) - checkpoint68i.tar.gz saved [172875785]

MITgcm-checkpoint68i/
MITgcm-checkpoint68i/.github/
MITgcm-checkpoint68i/.github/ISSUE_TEMPLATE.md
MITgcm-checkpoint68i/.github/PULL_REQUEST_TEMPLATE.md
MITgcm-checkpoint68i/.github/workflows/
MITgcm-checkpoint68i/.github/workflows/build_testing.yml
MITgcm-checkpoint68i/.gitignore
MITgcm-checkpoint68i/.readthedocs.yml
MITgcm-checkpoint68i/LICENSE.txt
MITgcm-checkpoint68i/README.md
MITgcm-checkpoint68i/doc/
MITgcm-checkpoint68i/doc/Makefile
MITgcm-checkpoint68i/doc/_extensions/
MITgcm-checkpoint68i/doc/_extensions/mitgcm.py
MITgcm-checkpoint68i/doc/_static/
MITgcm-checkpoint68i/doc/_static/css/
MITgcm-checkpoint68i/doc/_static/css/custom.css
MITgcm-checkpoint68i/doc/_static/css/wrap_tables.css
MITgcm-checkpoint68i/doc/algorithm/
MITgcm-checkpoint68i/doc/algorithm/adv-schemes.rst
MITgcm-checkpoint68i/doc/algorithm/algorithm.rst
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MITgcm-checkpoint68i/eesupp/src/Makefile
MITgcm-checkpoint68i/eesupp/src/all_proc_die.F
MITgcm-checkpoint68i/eesupp/src/bar2.F
MITgcm-checkpoint68i/eesupp/src/bar_check.F
MITgcm-checkpoint68i/eesupp/src/barrier.F
MITgcm-checkpoint68i/eesupp/src/check_threads.F
MITgcm-checkpoint68i/eesupp/src/comm_stats.F
MITgcm-checkpoint68i/eesupp/src/cumulsum_z_tile.F
MITgcm-checkpoint68i/eesupp/src/diff_phase_multiple.F
MITgcm-checkpoint68i/eesupp/src/different_multiple.F
MITgcm-checkpoint68i/eesupp/src/eeboot.F
MITgcm-checkpoint68i/eesupp/src/eeboot_minimal.F
MITgcm-checkpoint68i/eesupp/src/eedata_example.F
MITgcm-checkpoint68i/eesupp/src/eedie.F
MITgcm-checkpoint68i/eesupp/src/eeintro_msg.F
MITgcm-checkpoint68i/eesupp/src/eeset_parms.F
MITgcm-checkpoint68i/eesupp/src/eesupp.flow
MITgcm-checkpoint68i/eesupp/src/eesupp_ad_diff.list
MITgcm-checkpoint68i/eesupp/src/eewrite_eeenv.F
MITgcm-checkpoint68i/eesupp/src/exch0_rx.template
MITgcm-checkpoint68i/eesupp/src/exch1_ad.flow
MITgcm-checkpoint68i/eesupp/src/exch1_bg_rx_cube.template
MITgcm-checkpoint68i/eesupp/src/exch1_rx.template
MITgcm-checkpoint68i/eesupp/src/exch1_rx_ad.template
MITgcm-checkpoint68i/eesupp/src/exch1_rx_cube.template
MITgcm-checkpoint68i/eesupp/src/exch1_rx_cube_ad.template
MITgcm-checkpoint68i/eesupp/src/exch1_uv_rx_cube.template
MITgcm-checkpoint68i/eesupp/src/exch1_z_rx_cube.template
MITgcm-checkpoint68i/eesupp/src/exch_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_ad_diff.list
MITgcm-checkpoint68i/eesupp/src/exch_cycle_ebl.F
MITgcm-checkpoint68i/eesupp/src/exch_init.F
MITgcm-checkpoint68i/eesupp/src/exch_rx_recv_get_x.template
MITgcm-checkpoint68i/eesupp/src/exch_rx_recv_get_y.template
MITgcm-checkpoint68i/eesupp/src/exch_rx_send_put_x.template
MITgcm-checkpoint68i/eesupp/src/exch_rx_send_put_y.template
MITgcm-checkpoint68i/eesupp/src/exch_s3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_sm_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_agrid_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_bgrid_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_dgrid_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_xy_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_uv_xyz_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_xy_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_xyz_rx.template
MITgcm-checkpoint68i/eesupp/src/exch_z_3d_rx.template
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_ag_rl.F
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_tr_rl.F
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_uv_rl.F
MITgcm-checkpoint68i/eesupp/src/fill_cs_corner_uv_rs.F
MITgcm-checkpoint68i/eesupp/src/fool_the_compiler.F
MITgcm-checkpoint68i/eesupp/src/gather_2d_rx.template
MITgcm-checkpoint68i/eesupp/src/gather_2d_wh_rx.template
MITgcm-checkpoint68i/eesupp/src/gather_vec_rx.template
MITgcm-checkpoint68i/eesupp/src/gather_xz.F
MITgcm-checkpoint68i/eesupp/src/gather_yz.F
MITgcm-checkpoint68i/eesupp/src/get_periodic_interval.F
MITgcm-checkpoint68i/eesupp/src/global_max.F
MITgcm-checkpoint68i/eesupp/src/global_sum.F
MITgcm-checkpoint68i/eesupp/src/global_sum_singlecpu.F
MITgcm-checkpoint68i/eesupp/src/global_sum_tile.F
MITgcm-checkpoint68i/eesupp/src/global_vec_sum.F
MITgcm-checkpoint68i/eesupp/src/gsl_ieee_env.c
MITgcm-checkpoint68i/eesupp/src/gsum.F
MITgcm-checkpoint68i/eesupp/src/ini_communication_patterns.F
MITgcm-checkpoint68i/eesupp/src/ini_procs.F
MITgcm-checkpoint68i/eesupp/src/ini_threading_environment.F
MITgcm-checkpoint68i/eesupp/src/lef_zero.F
MITgcm-checkpoint68i/eesupp/src/main.F
MITgcm-checkpoint68i/eesupp/src/master_cpu_io.F
MITgcm-checkpoint68i/eesupp/src/master_cpu_thread.F
MITgcm-checkpoint68i/eesupp/src/mds_byteswapi4.F
MITgcm-checkpoint68i/eesupp/src/mds_byteswapr4.F
MITgcm-checkpoint68i/eesupp/src/mds_byteswapr8.F
MITgcm-checkpoint68i/eesupp/src/mds_flush.F
MITgcm-checkpoint68i/eesupp/src/mds_reclen.F
MITgcm-checkpoint68i/eesupp/src/mdsfindunit.F
MITgcm-checkpoint68i/eesupp/src/memsync.F
MITgcm-checkpoint68i/eesupp/src/nml_change_syntax.F
MITgcm-checkpoint68i/eesupp/src/nml_set_terminator.F
MITgcm-checkpoint68i/eesupp/src/open_copy_data_file.F
MITgcm-checkpoint68i/eesupp/src/print.F
MITgcm-checkpoint68i/eesupp/src/ptwrapper.c
MITgcm-checkpoint68i/eesupp/src/reset_halo.F
MITgcm-checkpoint68i/eesupp/src/scatter_2d_rx.template
MITgcm-checkpoint68i/eesupp/src/scatter_2d_wh_rx.template
MITgcm-checkpoint68i/eesupp/src/scatter_vec_rx.template
MITgcm-checkpoint68i/eesupp/src/scatter_xz.F
MITgcm-checkpoint68i/eesupp/src/scatter_yz.F
MITgcm-checkpoint68i/eesupp/src/setdir.c
MITgcm-checkpoint68i/eesupp/src/setrlstk.c
MITgcm-checkpoint68i/eesupp/src/sigreg.c
MITgcm-checkpoint68i/eesupp/src/stop_if_error.F
MITgcm-checkpoint68i/eesupp/src/tim.c
MITgcm-checkpoint68i/eesupp/src/timer_stats.c
MITgcm-checkpoint68i/eesupp/src/timers.F
MITgcm-checkpoint68i/eesupp/src/utils.F
MITgcm-checkpoint68i/eesupp/src/write_utils.F
MITgcm-checkpoint68i/jobs/
MITgcm-checkpoint68i/jobs/run_mitgcm_aer.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_eaps.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_gfdl.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_itrda.csh
MITgcm-checkpoint68i/jobs/run_mitgcm_sp4_bluesky.csh
MITgcm-checkpoint68i/jobs/run_optim.csh
MITgcm-checkpoint68i/lsopt/
MITgcm-checkpoint68i/lsopt/Makefile
MITgcm-checkpoint68i/lsopt/Makefile_macosx
MITgcm-checkpoint68i/lsopt/README.md
MITgcm-checkpoint68i/lsopt/blas1.h
MITgcm-checkpoint68i/lsopt/cubic.F
MITgcm-checkpoint68i/lsopt/data.ctrl
MITgcm-checkpoint68i/lsopt/data.ecco
MITgcm-checkpoint68i/lsopt/data.optim
MITgcm-checkpoint68i/lsopt/dgscale.F
MITgcm-checkpoint68i/lsopt/dostore.F
MITgcm-checkpoint68i/lsopt/hessupd.F
MITgcm-checkpoint68i/lsopt/instore.F
MITgcm-checkpoint68i/lsopt/libblas1.a_IRIX64.gz
MITgcm-checkpoint68i/lsopt/libblas1.a_SUN.gz
MITgcm-checkpoint68i/lsopt/libgoto_it2-r0.95.so.gz
MITgcm-checkpoint68i/lsopt/libgoto_p4_512-r0.94.so.gz
MITgcm-checkpoint68i/lsopt/lsline.F
MITgcm-checkpoint68i/lsopt/lsopt_doc.txt
MITgcm-checkpoint68i/lsopt/lsopt_top.F
MITgcm-checkpoint68i/lsopt/lsupdxx.F
MITgcm-checkpoint68i/lsopt/lswri.F
MITgcm-checkpoint68i/lsopt/outstore.F
MITgcm-checkpoint68i/model/
MITgcm-checkpoint68i/model/inc/
MITgcm-checkpoint68i/model/inc/CG2D.h
MITgcm-checkpoint68i/model/inc/CG3D.h
MITgcm-checkpoint68i/model/inc/CPP_OPTIONS.h
MITgcm-checkpoint68i/model/inc/DXC_MACROS.h
MITgcm-checkpoint68i/model/inc/DXF_MACROS.h
MITgcm-checkpoint68i/model/inc/DXG_MACROS.h
MITgcm-checkpoint68i/model/inc/DXV_MACROS.h
MITgcm-checkpoint68i/model/inc/DYC_MACROS.h
MITgcm-checkpoint68i/model/inc/DYF_MACROS.h
MITgcm-checkpoint68i/model/inc/DYG_MACROS.h
MITgcm-checkpoint68i/model/inc/DYNVARS.h
MITgcm-checkpoint68i/model/inc/DYU_MACROS.h
MITgcm-checkpoint68i/model/inc/EOS.h
MITgcm-checkpoint68i/model/inc/FCORI_MACROS.h
MITgcm-checkpoint68i/model/inc/FFIELDS.h
MITgcm-checkpoint68i/model/inc/GRID.h
MITgcm-checkpoint68i/model/inc/GRID_MACROS.h
MITgcm-checkpoint68i/model/inc/HFACC_MACROS.h
MITgcm-checkpoint68i/model/inc/HFACS_MACROS.h
MITgcm-checkpoint68i/model/inc/HFACW_MACROS.h
MITgcm-checkpoint68i/model/inc/MASKS_MACROS.h
MITgcm-checkpoint68i/model/inc/MASKW_MACROS.h
MITgcm-checkpoint68i/model/inc/NH_VARS.h
MITgcm-checkpoint68i/model/inc/PARAMS.h
MITgcm-checkpoint68i/model/inc/RAS_MACROS.h
MITgcm-checkpoint68i/model/inc/RAW_MACROS.h
MITgcm-checkpoint68i/model/inc/RA_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXC_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXF_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXG_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DXV_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYC_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYF_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYG_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_DYU_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_HFACC_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_HFACS_MACROS.h
MITgcm-checkpoint68i/model/inc/RECIP_HFACW_MACROS.h
MITgcm-checkpoint68i/model/inc/RESTART.h
MITgcm-checkpoint68i/model/inc/SET_GRID.h
MITgcm-checkpoint68i/model/inc/SIZE.h
MITgcm-checkpoint68i/model/inc/SOLVE_FOR_PRESSURE.h
MITgcm-checkpoint68i/model/inc/SOLVE_FOR_PRESSURE3D.h
MITgcm-checkpoint68i/model/inc/SURFACE.h
MITgcm-checkpoint68i/model/inc/TANPHIATU_MACROS.h
MITgcm-checkpoint68i/model/inc/TANPHIATV_MACROS.h
MITgcm-checkpoint68i/model/inc/THE_MODEL_COMMON_BLOCKS.h
MITgcm-checkpoint68i/model/inc/XC_MACROS.h
MITgcm-checkpoint68i/model/inc/YC_MACROS.h
MITgcm-checkpoint68i/model/src/
MITgcm-checkpoint68i/model/src/adams_bashforth2.F
MITgcm-checkpoint68i/model/src/adams_bashforth3.F
MITgcm-checkpoint68i/model/src/add_walls2masks.F
MITgcm-checkpoint68i/model/src/apply_forcing.F
MITgcm-checkpoint68i/model/src/calc_3d_diffusivity.F
MITgcm-checkpoint68i/model/src/calc_adv_flow.F
MITgcm-checkpoint68i/model/src/calc_div_ghat.F
MITgcm-checkpoint68i/model/src/calc_eddy_stress.F
MITgcm-checkpoint68i/model/src/calc_grad_phi_fv.F
MITgcm-checkpoint68i/model/src/calc_grad_phi_hyd.F
MITgcm-checkpoint68i/model/src/calc_grad_phi_surf.F
MITgcm-checkpoint68i/model/src/calc_grid_angles.F
MITgcm-checkpoint68i/model/src/calc_gw.F
MITgcm-checkpoint68i/model/src/calc_ivdc.F
MITgcm-checkpoint68i/model/src/calc_oce_mxlayer.F
MITgcm-checkpoint68i/model/src/calc_phi_hyd.F
MITgcm-checkpoint68i/model/src/calc_r_star.F
MITgcm-checkpoint68i/model/src/calc_surf_dr.F
MITgcm-checkpoint68i/model/src/calc_viscosity.F
MITgcm-checkpoint68i/model/src/calc_wsurf_tr.F
MITgcm-checkpoint68i/model/src/cg2d.F
MITgcm-checkpoint68i/model/src/cg2d_ex0.F
MITgcm-checkpoint68i/model/src/cg2d_nsa.F
MITgcm-checkpoint68i/model/src/cg2d_sr.F
MITgcm-checkpoint68i/model/src/cg3d.F
MITgcm-checkpoint68i/model/src/cg3d_ex0.F
MITgcm-checkpoint68i/model/src/check_pickup.F
MITgcm-checkpoint68i/model/src/config_check.F
MITgcm-checkpoint68i/model/src/config_summary.F
MITgcm-checkpoint68i/model/src/convective_adjustment.F
MITgcm-checkpoint68i/model/src/convective_adjustment_ini.F
MITgcm-checkpoint68i/model/src/convective_weights.F
MITgcm-checkpoint68i/model/src/convectively_mixtracer.F
MITgcm-checkpoint68i/model/src/correction_step.F
MITgcm-checkpoint68i/model/src/cycle_ab_tracer.F
MITgcm-checkpoint68i/model/src/cycle_tracer.F
MITgcm-checkpoint68i/model/src/diags_oceanic_surf_flux.F
MITgcm-checkpoint68i/model/src/diags_phi_hyd.F
MITgcm-checkpoint68i/model/src/diags_phi_rlow.F
MITgcm-checkpoint68i/model/src/diags_rho.F
MITgcm-checkpoint68i/model/src/diags_sound_speed.F
MITgcm-checkpoint68i/model/src/do_atmospheric_phys.F
MITgcm-checkpoint68i/model/src/do_fields_blocking_exchanges.F
MITgcm-checkpoint68i/model/src/do_oceanic_phys.F
MITgcm-checkpoint68i/model/src/do_stagger_fields_exchanges.F
MITgcm-checkpoint68i/model/src/do_statevars_diags.F
MITgcm-checkpoint68i/model/src/do_statevars_tave.F
MITgcm-checkpoint68i/model/src/do_the_model_io.F
MITgcm-checkpoint68i/model/src/do_write_pickup.F
MITgcm-checkpoint68i/model/src/dynamics.F
MITgcm-checkpoint68i/model/src/external_fields_load.F
MITgcm-checkpoint68i/model/src/external_forcing.F
MITgcm-checkpoint68i/model/src/external_forcing_surf.F
MITgcm-checkpoint68i/model/src/find_alpha.F
MITgcm-checkpoint68i/model/src/find_hyd_press_1d.F
MITgcm-checkpoint68i/model/src/find_rho.F
MITgcm-checkpoint68i/model/src/forcing_surf_relax.F
MITgcm-checkpoint68i/model/src/forward_step.F
MITgcm-checkpoint68i/model/src/freesurf_rescale_g.F
MITgcm-checkpoint68i/model/src/freeze_surface.F
MITgcm-checkpoint68i/model/src/grad_sigma.F
MITgcm-checkpoint68i/model/src/gsw_teos10.F
MITgcm-checkpoint68i/model/src/impldiff.F
MITgcm-checkpoint68i/model/src/ini_cartesian_grid.F
MITgcm-checkpoint68i/model/src/ini_cg2d.F
MITgcm-checkpoint68i/model/src/ini_cg3d.F
MITgcm-checkpoint68i/model/src/ini_cori.F
MITgcm-checkpoint68i/model/src/ini_curvilinear_grid.F
MITgcm-checkpoint68i/model/src/ini_cylinder_grid.F
MITgcm-checkpoint68i/model/src/ini_depths.F
MITgcm-checkpoint68i/model/src/ini_dynvars.F
MITgcm-checkpoint68i/model/src/ini_eos.F
MITgcm-checkpoint68i/model/src/ini_ffields.F
MITgcm-checkpoint68i/model/src/ini_fields.F
MITgcm-checkpoint68i/model/src/ini_forcing.F
MITgcm-checkpoint68i/model/src/ini_global_domain.F
MITgcm-checkpoint68i/model/src/ini_grid.F
MITgcm-checkpoint68i/model/src/ini_linear_phisurf.F
MITgcm-checkpoint68i/model/src/ini_local_grid.F
MITgcm-checkpoint68i/model/src/ini_masks_etc.F
MITgcm-checkpoint68i/model/src/ini_mixing.F
MITgcm-checkpoint68i/model/src/ini_mnc_vars.F
MITgcm-checkpoint68i/model/src/ini_model_io.F
MITgcm-checkpoint68i/model/src/ini_nh_fields.F
MITgcm-checkpoint68i/model/src/ini_nh_vars.F
MITgcm-checkpoint68i/model/src/ini_nlfs_vars.F
MITgcm-checkpoint68i/model/src/ini_p_ground.F
MITgcm-checkpoint68i/model/src/ini_parms.F
MITgcm-checkpoint68i/model/src/ini_pressure.F
MITgcm-checkpoint68i/model/src/ini_psurf.F
MITgcm-checkpoint68i/model/src/ini_salt.F
MITgcm-checkpoint68i/model/src/ini_sigma_hfac.F
MITgcm-checkpoint68i/model/src/ini_spherical_polar_grid.F
MITgcm-checkpoint68i/model/src/ini_theta.F
MITgcm-checkpoint68i/model/src/ini_vel.F
MITgcm-checkpoint68i/model/src/ini_vertical_grid.F
MITgcm-checkpoint68i/model/src/initialise_fixed.F
MITgcm-checkpoint68i/model/src/initialise_varia.F
MITgcm-checkpoint68i/model/src/integr_continuity.F
MITgcm-checkpoint68i/model/src/integrate_for_w.F
MITgcm-checkpoint68i/model/src/load_fields_driver.F
MITgcm-checkpoint68i/model/src/load_grid_spacing.F
MITgcm-checkpoint68i/model/src/load_ref_files.F
MITgcm-checkpoint68i/model/src/main_do_loop.F
MITgcm-checkpoint68i/model/src/model_ad_diff.list
MITgcm-checkpoint68i/model/src/momentum_correction_step.F
MITgcm-checkpoint68i/model/src/packages_boot.F
MITgcm-checkpoint68i/model/src/packages_check.F
MITgcm-checkpoint68i/model/src/packages_error_msg.F
MITgcm-checkpoint68i/model/src/packages_init_fixed.F
MITgcm-checkpoint68i/model/src/packages_init_variables.F
MITgcm-checkpoint68i/model/src/packages_print_msg.F
MITgcm-checkpoint68i/model/src/packages_readparms.F
MITgcm-checkpoint68i/model/src/packages_unused_msg.F
MITgcm-checkpoint68i/model/src/packages_write_pickup.F
MITgcm-checkpoint68i/model/src/plot_field.F
MITgcm-checkpoint68i/model/src/port_rand.F
MITgcm-checkpoint68i/model/src/post_cg3d.F
MITgcm-checkpoint68i/model/src/pre_cg3d.F
MITgcm-checkpoint68i/model/src/pressure_for_eos.F
MITgcm-checkpoint68i/model/src/read_pickup.F
MITgcm-checkpoint68i/model/src/remove_mean.F
MITgcm-checkpoint68i/model/src/reset_nlfs_vars.F
MITgcm-checkpoint68i/model/src/rotate_spherical_polar_grid.F
MITgcm-checkpoint68i/model/src/rotate_uv2en.F
MITgcm-checkpoint68i/model/src/salt_integrate.F
MITgcm-checkpoint68i/model/src/seawater.F
MITgcm-checkpoint68i/model/src/set_defaults.F
MITgcm-checkpoint68i/model/src/set_grid_factors.F
MITgcm-checkpoint68i/model/src/set_parms.F
MITgcm-checkpoint68i/model/src/set_ref_state.F
MITgcm-checkpoint68i/model/src/solve_for_pressure.F
MITgcm-checkpoint68i/model/src/solve_pentadiagonal.F
MITgcm-checkpoint68i/model/src/solve_tridiagonal.F
MITgcm-checkpoint68i/model/src/solve_uv_tridiago.F
MITgcm-checkpoint68i/model/src/state_summary.F
MITgcm-checkpoint68i/model/src/swfrac.F
MITgcm-checkpoint68i/model/src/taueddy_init_varia.F
MITgcm-checkpoint68i/model/src/taueddy_tendency_apply.F
MITgcm-checkpoint68i/model/src/temp_integrate.F
MITgcm-checkpoint68i/model/src/the_main_loop.F
MITgcm-checkpoint68i/model/src/the_model_main.F
MITgcm-checkpoint68i/model/src/thermodynamics.F
MITgcm-checkpoint68i/model/src/timestep.F
MITgcm-checkpoint68i/model/src/timestep_tracer.F
MITgcm-checkpoint68i/model/src/timestep_wvel.F
MITgcm-checkpoint68i/model/src/tracers_correction_step.F
MITgcm-checkpoint68i/model/src/tracers_iigw_correction.F
MITgcm-checkpoint68i/model/src/turnoff_model_io.F
MITgcm-checkpoint68i/model/src/update_cg2d.F
MITgcm-checkpoint68i/model/src/update_etah.F
MITgcm-checkpoint68i/model/src/update_etaws.F
MITgcm-checkpoint68i/model/src/update_masks_etc.F
MITgcm-checkpoint68i/model/src/update_r_star.F
MITgcm-checkpoint68i/model/src/update_sigma.F
MITgcm-checkpoint68i/model/src/update_surf_dr.F
MITgcm-checkpoint68i/model/src/write_grid.F
MITgcm-checkpoint68i/model/src/write_pickup.F
MITgcm-checkpoint68i/model/src/write_state.F
MITgcm-checkpoint68i/optim/
MITgcm-checkpoint68i/optim/Makefile
MITgcm-checkpoint68i/optim/Makefile_macosx
MITgcm-checkpoint68i/optim/README.md
MITgcm-checkpoint68i/optim/blas1.h
MITgcm-checkpoint68i/optim/data.ctrl
MITgcm-checkpoint68i/optim/data.ecco
MITgcm-checkpoint68i/optim/data.optim
MITgcm-checkpoint68i/optim/flowchart_optim.txt
MITgcm-checkpoint68i/optim/minimization.h
MITgcm-checkpoint68i/optim/optim.h
MITgcm-checkpoint68i/optim/optim_initmod.F
MITgcm-checkpoint68i/optim/optim_main.F
MITgcm-checkpoint68i/optim/optim_numbmod.F
MITgcm-checkpoint68i/optim/optim_readdata.F
MITgcm-checkpoint68i/optim/optim_sub.F
MITgcm-checkpoint68i/optim/optim_write_control.F
MITgcm-checkpoint68i/optim/optim_writedata.F
MITgcm-checkpoint68i/optim/simul.F
MITgcm-checkpoint68i/optim/to_do.txt
MITgcm-checkpoint68i/optim/utils.F
MITgcm-checkpoint68i/optim/xerbla.F
MITgcm-checkpoint68i/pkg/
MITgcm-checkpoint68i/pkg/admtlm/
MITgcm-checkpoint68i/pkg/admtlm/ADMTLM_OPTIONS.h
MITgcm-checkpoint68i/pkg/admtlm/admtlm_bypassad.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_driver.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_dsvd2model.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_init_fixed.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_map.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_metric.F
MITgcm-checkpoint68i/pkg/admtlm/admtlm_model2dsvd.F
MITgcm-checkpoint68i/pkg/admtlm/arpack_debug.h
MITgcm-checkpoint68i/pkg/aim_v23/
MITgcm-checkpoint68i/pkg/aim_v23/AIM2DYN.h
MITgcm-checkpoint68i/pkg/aim_v23/AIM_CO2.h
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MITgcm-checkpoint68i/pkg/aim_v23/aim_do_physics.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_dyn2aim.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_fields_load.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_initialise.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_land2aim.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_land_impl.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_mnc_init.F
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MITgcm-checkpoint68i/pkg/aim_v23/aim_sice_impl.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_surf_bc.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_tendency_apply.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_v23_description.tex
MITgcm-checkpoint68i/pkg/aim_v23/aim_write_local.F
MITgcm-checkpoint68i/pkg/aim_v23/aim_write_phys.F
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MITgcm-checkpoint68i/pkg/aim_v23/com_lsccon.h
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MITgcm-checkpoint68i/pkg/aim_v23/phy_const.h
MITgcm-checkpoint68i/pkg/aim_v23/phy_convmf.F
MITgcm-checkpoint68i/pkg/aim_v23/phy_driver.F
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MITgcm-checkpoint68i/pkg/atm_ocn_coupler/ocn_to_atm_mapxyr8.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/set_runoffmap.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/setdir.c
MITgcm-checkpoint68i/pkg/atm_phys/
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MITgcm-checkpoint68i/pkg/atm_phys/ATM_PHYS_PARAMS.h
MITgcm-checkpoint68i/pkg/atm_phys/ATM_PHYS_VARS.h
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MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_diagnostics_init.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_driver.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_dyn2phys.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_init_fixed.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_init_varia.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_read_pickup.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_readparms.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_tendency_apply.F
MITgcm-checkpoint68i/pkg/atm_phys/atm_phys_write_pickup.F
MITgcm-checkpoint68i/pkg/atm_phys/constants_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/dargan_bettsmiller_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/diffusivity_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/gcm_params_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/lscale_cond_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/mixed_layer_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/monin_obukhov_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/my25_turb_mod.F90
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MITgcm-checkpoint68i/pkg/atm_phys/old_doc/diffusivity.tech.ps
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MITgcm-checkpoint68i/pkg/atm_phys/old_doc/shallow_conv.html
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MITgcm-checkpoint68i/pkg/atm_phys/old_doc/vert_diff.tech.ps
MITgcm-checkpoint68i/pkg/atm_phys/old_doc/vert_turb_driver.html
MITgcm-checkpoint68i/pkg/atm_phys/radiation_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/shallow_conv_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/simple_sat_vapor_pres_mod.F90
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MITgcm-checkpoint68i/pkg/atm_phys/vert_turb_driver_mod.F90
MITgcm-checkpoint68i/pkg/autodiff/
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MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_MYFIELDS.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_OPTIONS.h
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MITgcm-checkpoint68i/pkg/autodiff/ECCO_CPPOPTIONS.h
MITgcm-checkpoint68i/pkg/autodiff/README
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MITgcm-checkpoint68i/pkg/autodiff/global_max_ad.F
MITgcm-checkpoint68i/pkg/autodiff/global_max_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/global_sum_ad.F
MITgcm-checkpoint68i/pkg/autodiff/global_sum_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/global_sum_tile_ad.F
MITgcm-checkpoint68i/pkg/autodiff/initialisation.flow
MITgcm-checkpoint68i/pkg/autodiff/model_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction.F
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction.flow
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction_ad.F
MITgcm-checkpoint68i/pkg/autodiff/system.flow
MITgcm-checkpoint68i/pkg/autodiff/tamc.h
MITgcm-checkpoint68i/pkg/autodiff/zero_adj.F
MITgcm-checkpoint68i/pkg/autodiff/zero_adj.flow
MITgcm-checkpoint68i/pkg/bbl/
MITgcm-checkpoint68i/pkg/bbl/BBL.h
MITgcm-checkpoint68i/pkg/bbl/BBL_OPTIONS.h
MITgcm-checkpoint68i/pkg/bbl/bbl_ad.flow
MITgcm-checkpoint68i/pkg/bbl/bbl_ad_diff.list
MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rho.F
MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rhs.F
MITgcm-checkpoint68i/pkg/bbl/bbl_check.F
MITgcm-checkpoint68i/pkg/bbl/bbl_description.tex
MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_state.F
MITgcm-checkpoint68i/pkg/bbl/bbl_init_fixed.F
MITgcm-checkpoint68i/pkg/bbl/bbl_init_varia.F
MITgcm-checkpoint68i/pkg/bbl/bbl_read_pickup.F
MITgcm-checkpoint68i/pkg/bbl/bbl_readparms.F
MITgcm-checkpoint68i/pkg/bbl/bbl_tendency_apply.F
MITgcm-checkpoint68i/pkg/bbl/bbl_write_pickup.F
MITgcm-checkpoint68i/pkg/bling/
MITgcm-checkpoint68i/pkg/bling/BLING_LOAD.h
MITgcm-checkpoint68i/pkg/bling/BLING_OPTIONS.h
MITgcm-checkpoint68i/pkg/bling/BLING_VARS.h
MITgcm-checkpoint68i/pkg/bling/CHANGES_TO_BLING.txt
MITgcm-checkpoint68i/pkg/bling/bling_ad.flow
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_diff.list
MITgcm-checkpoint68i/pkg/bling/bling_airseaflux.F
MITgcm-checkpoint68i/pkg/bling/bling_bio.F
MITgcm-checkpoint68i/pkg/bling/bling_bio_nitrogen.F
MITgcm-checkpoint68i/pkg/bling/bling_carbon_chem.F
MITgcm-checkpoint68i/pkg/bling/bling_carbonate_init.F
MITgcm-checkpoint68i/pkg/bling/bling_carbonate_sys.F
MITgcm-checkpoint68i/pkg/bling/bling_description.txt
MITgcm-checkpoint68i/pkg/bling/bling_diagnostics_init.F
MITgcm-checkpoint68i/pkg/bling/bling_fields_load.F
MITgcm-checkpoint68i/pkg/bling/bling_ini_forcing.F
MITgcm-checkpoint68i/pkg/bling/bling_init_fixed.F
MITgcm-checkpoint68i/pkg/bling/bling_init_varia.F
MITgcm-checkpoint68i/pkg/bling/bling_light.F
MITgcm-checkpoint68i/pkg/bling/bling_main.F
MITgcm-checkpoint68i/pkg/bling/bling_min_val.F
MITgcm-checkpoint68i/pkg/bling/bling_mixedlayer.F
MITgcm-checkpoint68i/pkg/bling/bling_read_pickup.F
MITgcm-checkpoint68i/pkg/bling/bling_readparms.F
MITgcm-checkpoint68i/pkg/bling/bling_sgs.F
MITgcm-checkpoint68i/pkg/bling/bling_solvesaphe.F
MITgcm-checkpoint68i/pkg/bling/bling_tr_register.F
MITgcm-checkpoint68i/pkg/bling/bling_write_pickup.F
MITgcm-checkpoint68i/pkg/bulk_force/
MITgcm-checkpoint68i/pkg/bulk_force/BULKF.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_CONSERV.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_INT.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_PARAMS.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_TAVE.h
MITgcm-checkpoint68i/pkg/bulk_force/BULK_FORCE_OPTIONS.h
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_ave.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_fields_load.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_flux_adjust.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_forcing.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_aim.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lanl.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lay.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_init_varia.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_output.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_readparms.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_sh2rh_aim.F
MITgcm-checkpoint68i/pkg/cal/
MITgcm-checkpoint68i/pkg/cal/CAL_OPTIONS.h
MITgcm-checkpoint68i/pkg/cal/cal.h
MITgcm-checkpoint68i/pkg/cal/cal_ad_diff.list
MITgcm-checkpoint68i/pkg/cal/cal_addtime.F
MITgcm-checkpoint68i/pkg/cal/cal_checkdate.F
MITgcm-checkpoint68i/pkg/cal/cal_compdates.F
MITgcm-checkpoint68i/pkg/cal/cal_convdate.F
MITgcm-checkpoint68i/pkg/cal/cal_copydate.F
MITgcm-checkpoint68i/pkg/cal/cal_daysformonth.F
MITgcm-checkpoint68i/pkg/cal/cal_dayspermonth.F
MITgcm-checkpoint68i/pkg/cal/cal_description.tex
MITgcm-checkpoint68i/pkg/cal/cal_fulldate.F
MITgcm-checkpoint68i/pkg/cal/cal_getdate.F
MITgcm-checkpoint68i/pkg/cal/cal_getmonthsrec.F
MITgcm-checkpoint68i/pkg/cal/cal_init_fixed.F
MITgcm-checkpoint68i/pkg/cal/cal_intdays.F
MITgcm-checkpoint68i/pkg/cal/cal_intmonths.F
MITgcm-checkpoint68i/pkg/cal/cal_intyears.F
MITgcm-checkpoint68i/pkg/cal/cal_isleap.F
MITgcm-checkpoint68i/pkg/cal/cal_monthsforyear.F
MITgcm-checkpoint68i/pkg/cal/cal_monthsperyear.F
MITgcm-checkpoint68i/pkg/cal/cal_numints.F
MITgcm-checkpoint68i/pkg/cal/cal_printdate.F
MITgcm-checkpoint68i/pkg/cal/cal_printerror.F
MITgcm-checkpoint68i/pkg/cal/cal_readparms.F
MITgcm-checkpoint68i/pkg/cal/cal_set.F
MITgcm-checkpoint68i/pkg/cal/cal_stepsforday.F
MITgcm-checkpoint68i/pkg/cal/cal_stepsperday.F
MITgcm-checkpoint68i/pkg/cal/cal_subdates.F
MITgcm-checkpoint68i/pkg/cal/cal_summary.F
MITgcm-checkpoint68i/pkg/cal/cal_time2dump.F
MITgcm-checkpoint68i/pkg/cal/cal_timeinterval.F
MITgcm-checkpoint68i/pkg/cal/cal_timepassed.F
MITgcm-checkpoint68i/pkg/cal/cal_timestamp.F
MITgcm-checkpoint68i/pkg/cal/cal_toseconds.F
MITgcm-checkpoint68i/pkg/cal/cal_weekday.F
MITgcm-checkpoint68i/pkg/cd_code/
MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_OPTIONS.h
MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_VARS.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad.flow
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_diff.list
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ini_vars.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_init_fixed.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_read_pickup.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_scheme.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_write_pickup.F
MITgcm-checkpoint68i/pkg/cfc/
MITgcm-checkpoint68i/pkg/cfc/CFC.h
MITgcm-checkpoint68i/pkg/cfc/CFC_ATMOS.h
MITgcm-checkpoint68i/pkg/cfc/CFC_SIZE.h
MITgcm-checkpoint68i/pkg/cfc/cfc11_forcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc11_surfforcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc12_forcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc12_surfforcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_diff.list
MITgcm-checkpoint68i/pkg/cfc/cfc_atmos.F
MITgcm-checkpoint68i/pkg/cfc/cfc_check.F
MITgcm-checkpoint68i/pkg/cfc/cfc_fields_load.F
MITgcm-checkpoint68i/pkg/cfc/cfc_param.F
MITgcm-checkpoint68i/pkg/cfc/cfc_readparms.F
MITgcm-checkpoint68i/pkg/cfc/cfc_tr_register.F
MITgcm-checkpoint68i/pkg/cheapaml/
MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML.h
MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML_OPTIONS.h
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_calc_rhs.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_coare3_flux.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_copy_edges.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_diagnostics_init.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_fields_load.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_fixed.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_varia.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_lanl_flux.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_read_pickup.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_readparms.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_seaice.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_timestep.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_write_pickup.F
MITgcm-checkpoint68i/pkg/chronos/
MITgcm-checkpoint68i/pkg/chronos/chronos.F
MITgcm-checkpoint68i/pkg/chronos/chronos.h
MITgcm-checkpoint68i/pkg/compon_communic/
MITgcm-checkpoint68i/pkg/compon_communic/CPLR_SIG.h
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/generate_tag.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_init.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_tile_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_init.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_tile_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_all_check.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2dbl.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2int.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2real.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_dbl2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init1.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2a.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2b.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_initcomp.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_int2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_match_comp.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_real2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_sortranks.F
MITgcm-checkpoint68i/pkg/cost/
MITgcm-checkpoint68i/pkg/cost/COST_OPTIONS.h
MITgcm-checkpoint68i/pkg/cost/adcost.h
MITgcm-checkpoint68i/pkg/cost/cost.h
MITgcm-checkpoint68i/pkg/cost/cost_accumulate_mean.F
MITgcm-checkpoint68i/pkg/cost/cost_ad.flow
MITgcm-checkpoint68i/pkg/cost/cost_ad_diff.list
MITgcm-checkpoint68i/pkg/cost/cost_atlantic_heat.F
MITgcm-checkpoint68i/pkg/cost/cost_check.F
MITgcm-checkpoint68i/pkg/cost/cost_dependent_init.F
MITgcm-checkpoint68i/pkg/cost/cost_depth.F
MITgcm-checkpoint68i/pkg/cost/cost_final.F
MITgcm-checkpoint68i/pkg/cost/cost_final_restore.F
MITgcm-checkpoint68i/pkg/cost/cost_final_store.F
MITgcm-checkpoint68i/pkg/cost/cost_init_varia.F
MITgcm-checkpoint68i/pkg/cost/cost_readparms.F
MITgcm-checkpoint68i/pkg/cost/cost_state_final.F
MITgcm-checkpoint68i/pkg/cost/cost_test.F
MITgcm-checkpoint68i/pkg/cost/cost_tile.F
MITgcm-checkpoint68i/pkg/cost/cost_tracer.F
MITgcm-checkpoint68i/pkg/cost/cost_vector.F
MITgcm-checkpoint68i/pkg/cost/g_cost.h
MITgcm-checkpoint68i/pkg/ctrl/
MITgcm-checkpoint68i/pkg/ctrl/CTRL_FIELDS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_GENARR.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_OBCS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_OPTIONS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_SIZE.h
MITgcm-checkpoint68i/pkg/ctrl/adctrl_bound.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_diff.list
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.flow
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound_tl.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_check.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_driver.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_depth_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_description.tex
MITgcm-checkpoint68i/pkg/ctrl/ctrl_dummy.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen_rec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_mask.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcse.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsn.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcss.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsw.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getrec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_hfacc_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_ctrlvar.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_obcs_variables.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_rec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_variables.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_wet.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_local_params.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_forcing.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_genarr.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_gentim2d.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_ecco.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_genarr.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gentim2d.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_pack.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_readparms.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_fname.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_smooth.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_summary.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_swapffields.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_toolbox.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_unpack.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_weights.h
MITgcm-checkpoint68i/pkg/ctrl/optim.h
MITgcm-checkpoint68i/pkg/ctrl/optim_readparms.F
MITgcm-checkpoint68i/pkg/debug/
MITgcm-checkpoint68i/pkg/debug/DEBUG_OPTIONS.h
MITgcm-checkpoint68i/pkg/debug/chksum_tiled.F
MITgcm-checkpoint68i/pkg/debug/debug_ad.flow
MITgcm-checkpoint68i/pkg/debug/debug_call.F
MITgcm-checkpoint68i/pkg/debug/debug_cs_corner_uv.F
MITgcm-checkpoint68i/pkg/debug/debug_enter.F
MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rl.F
MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rs.F
MITgcm-checkpoint68i/pkg/debug/debug_leave.F
MITgcm-checkpoint68i/pkg/debug/debug_msg.F
MITgcm-checkpoint68i/pkg/debug/debug_stats_rl.F
MITgcm-checkpoint68i/pkg/debug/debug_stats_rs.F
MITgcm-checkpoint68i/pkg/debug/fill_in_corners_rl.F
MITgcm-checkpoint68i/pkg/debug/write_fullarray_rl.F
MITgcm-checkpoint68i/pkg/debug/write_fullarray_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_CALC.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGSTATS_REGIONS.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAG_OPTIONS.h
MITgcm-checkpoint68i/pkg/diagnostics/diag_calc_psivel.F
MITgcm-checkpoint68i/pkg/diagnostics/diag_cg2d.F
MITgcm-checkpoint68i/pkg/diagnostics/diag_vegtile_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad.flow
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad_diff.list
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_addtolist.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_calc_phivel.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_check.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_clear.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_field.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_state.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fract_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ini_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_early.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_fixed.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_varia.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_p2p.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_vert.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_is_on.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_list_check.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_main_init.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_mnc_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_read_pickup.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_readparms.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_levels.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_pointers.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_setdiag.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_status_error.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_sum_levels.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_summary.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_switch_onoff.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_utils.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_adj.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_pickup.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ascii_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_clear.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_close_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_global.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ini_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_local.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_mnc_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_others_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_output.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_pointers.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_regions.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_setdiag.F
MITgcm-checkpoint68i/pkg/dic/
MITgcm-checkpoint68i/pkg/dic/DIC_ATMOS.h
MITgcm-checkpoint68i/pkg/dic/DIC_COST.h
MITgcm-checkpoint68i/pkg/dic/DIC_CTRL.h
MITgcm-checkpoint68i/pkg/dic/DIC_LOAD.h
MITgcm-checkpoint68i/pkg/dic/DIC_OPTIONS.h
MITgcm-checkpoint68i/pkg/dic/DIC_VARS.h
MITgcm-checkpoint68i/pkg/dic/alk_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/bio_export.F
MITgcm-checkpoint68i/pkg/dic/calcite_saturation.F
MITgcm-checkpoint68i/pkg/dic/car_flux.F
MITgcm-checkpoint68i/pkg/dic/car_flux_omega_top.F
MITgcm-checkpoint68i/pkg/dic/carbon_chem.F
MITgcm-checkpoint68i/pkg/dic/dic_ad.flow
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_diff.list
MITgcm-checkpoint68i/pkg/dic/dic_atmos.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_diags.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_forcing.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_init.F
MITgcm-checkpoint68i/pkg/dic/dic_cost.F
MITgcm-checkpoint68i/pkg/dic/dic_diagnostics_init.F
MITgcm-checkpoint68i/pkg/dic/dic_fields_load.F
MITgcm-checkpoint68i/pkg/dic/dic_fields_update.F
MITgcm-checkpoint68i/pkg/dic/dic_ini_atmos.F
MITgcm-checkpoint68i/pkg/dic/dic_ini_forcing.F
MITgcm-checkpoint68i/pkg/dic/dic_init_fixed.F
MITgcm-checkpoint68i/pkg/dic/dic_init_varia.F
MITgcm-checkpoint68i/pkg/dic/dic_mnc_init.F
MITgcm-checkpoint68i/pkg/dic/dic_read_co2_pickup.F
MITgcm-checkpoint68i/pkg/dic/dic_read_pickup.F
MITgcm-checkpoint68i/pkg/dic/dic_readparms.F
MITgcm-checkpoint68i/pkg/dic/dic_set_control.F
MITgcm-checkpoint68i/pkg/dic/dic_solvesaphe.F
MITgcm-checkpoint68i/pkg/dic/dic_store_fluxco2.F
MITgcm-checkpoint68i/pkg/dic/dic_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/dic_surfforcing_init.F
MITgcm-checkpoint68i/pkg/dic/dic_tr_register.F
MITgcm-checkpoint68i/pkg/dic/dic_write_pickup.F
MITgcm-checkpoint68i/pkg/dic/fe_chem.F
MITgcm-checkpoint68i/pkg/dic/insol.F
MITgcm-checkpoint68i/pkg/dic/o2_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/phos_flux.F
MITgcm-checkpoint68i/pkg/down_slope/
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_OPTIONS.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_PARAMS.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_SIZE.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_VARS.h
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_ad_diff.list
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_apply.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_flow.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_rho.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_diagnostics_init.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_fixed.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_varia.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_readparms.F
MITgcm-checkpoint68i/pkg/ebm/
MITgcm-checkpoint68i/pkg/ebm/EBM.h
MITgcm-checkpoint68i/pkg/ebm/EBM_OPTIONS.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_diff.list
MITgcm-checkpoint68i/pkg/ebm/ebm_area_t.F
MITgcm-checkpoint68i/pkg/ebm/ebm_atmosphere.F
MITgcm-checkpoint68i/pkg/ebm/ebm_driver.F
MITgcm-checkpoint68i/pkg/ebm/ebm_ini_vars.F
MITgcm-checkpoint68i/pkg/ebm/ebm_load_climatology.F
MITgcm-checkpoint68i/pkg/ebm/ebm_readparms.F
MITgcm-checkpoint68i/pkg/ebm/ebm_wind_perturb.F
MITgcm-checkpoint68i/pkg/ebm/ebm_zonalmean.F
MITgcm-checkpoint68i/pkg/ecco/
MITgcm-checkpoint68i/pkg/ecco/ECCO.h
MITgcm-checkpoint68i/pkg/ecco/ECCO_OPTIONS.h
MITgcm-checkpoint68i/pkg/ecco/ECCO_SIZE.h
MITgcm-checkpoint68i/pkg/ecco/cost_averagesfields.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesflags.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesgeneric.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesinit.F
MITgcm-checkpoint68i/pkg/ecco/cost_bp_read.F
MITgcm-checkpoint68i/pkg/ecco/cost_forcing.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencal.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_all.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_assignperiod.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_boxmean.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_bpv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_customize.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_glbmean.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_moc.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_seaicev4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sshv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sstv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_transp.F
MITgcm-checkpoint68i/pkg/ecco/cost_generic.F
MITgcm-checkpoint68i/pkg/ecco/cost_genread.F
MITgcm-checkpoint68i/pkg/ecco/cost_hyd.F
MITgcm-checkpoint68i/pkg/ecco/cost_internal_params.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcs.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcs_ageos.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcse.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsn.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcss.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsvol.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsw.F
MITgcm-checkpoint68i/pkg/ecco/cost_sla_read.F
MITgcm-checkpoint68i/pkg/ecco/cost_sla_read_yd.F
MITgcm-checkpoint68i/pkg/ecco/cost_ssh.F
MITgcm-checkpoint68i/pkg/ecco/ecco_ad.flow
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_diff.list
MITgcm-checkpoint68i/pkg/ecco/ecco_check.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost.h
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_driver.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_final.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_barfiles.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_fixed.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_varia.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_summary.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_weights.F
MITgcm-checkpoint68i/pkg/ecco/ecco_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ecco/ecco_init_fixed.F
MITgcm-checkpoint68i/pkg/ecco/ecco_init_varia.F
MITgcm-checkpoint68i/pkg/ecco/ecco_local_params.h
MITgcm-checkpoint68i/pkg/ecco/ecco_phys.F
MITgcm-checkpoint68i/pkg/ecco/ecco_readparms.F
MITgcm-checkpoint68i/pkg/ecco/ecco_summary.F
MITgcm-checkpoint68i/pkg/ecco/ecco_toolbox.F
MITgcm-checkpoint68i/pkg/ecco/stergloh_output.F
MITgcm-checkpoint68i/pkg/embed_files/
MITgcm-checkpoint68i/pkg/embed_files/EMBED_FILES_OPTIONS.h
MITgcm-checkpoint68i/pkg/embed_files/README.txt
MITgcm-checkpoint68i/pkg/embed_files/decode_files.c
MITgcm-checkpoint68i/pkg/embed_files/embed_files_init.F
MITgcm-checkpoint68i/pkg/exch2/
MITgcm-checkpoint68i/pkg/exch2/Makefile
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_BUFFER.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_PARAMS.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_SIZE.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_TOPOLOGY.h
MITgcm-checkpoint68i/pkg/exch2/W2_OPTIONS.h
MITgcm-checkpoint68i/pkg/exch2/exch2.flow
MITgcm-checkpoint68i/pkg/exch2/exch2_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_diff.list
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_check_depths.F
MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_get_scal_bounds.F
MITgcm-checkpoint68i/pkg/exch2/exch2_get_uv_bounds.F
MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube_ad.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube_ad.template
MITgcm-checkpoint68i/pkg/exch2/exch2_s3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_sm_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_agrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_bgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_cgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_dgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_z_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/w2_cumulsum_z_tile.F
MITgcm-checkpoint68i/pkg/exch2/w2_e2setup.F
MITgcm-checkpoint68i/pkg/exch2/w2_eeboot.F
MITgcm-checkpoint68i/pkg/exch2/w2_map_procs.F
MITgcm-checkpoint68i/pkg/exch2/w2_print_comm_sequence.F
MITgcm-checkpoint68i/pkg/exch2/w2_print_e2setup.F
MITgcm-checkpoint68i/pkg/exch2/w2_readparms.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_cs6_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_f2f_index.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_gen_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_map_cumsum.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_map_tiles.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_myown_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_single_facet.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_tile2tiles.F
MITgcm-checkpoint68i/pkg/exf/
MITgcm-checkpoint68i/pkg/exf/EXF_CONSTANTS.h
MITgcm-checkpoint68i/pkg/exf/EXF_FIELDS.h
MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_PARAM.h
MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_SIZE.h
MITgcm-checkpoint68i/pkg/exf/EXF_OPTIONS.h
MITgcm-checkpoint68i/pkg/exf/EXF_PARAM.h
MITgcm-checkpoint68i/pkg/exf/TODO.txt
MITgcm-checkpoint68i/pkg/exf/exf_ad.flow
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_diff.list
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots.F
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots__g.F
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots_ad.F
MITgcm-checkpoint68i/pkg/exf/exf_bulkformulae.F
MITgcm-checkpoint68i/pkg/exf/exf_check.F
MITgcm-checkpoint68i/pkg/exf/exf_check_range.F
MITgcm-checkpoint68i/pkg/exf/exf_description.tex
MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_init.F
MITgcm-checkpoint68i/pkg/exf/exf_filter_rl.F
MITgcm-checkpoint68i/pkg/exf/exf_getclim.F
MITgcm-checkpoint68i/pkg/exf/exf_getffield_start.F
MITgcm-checkpoint68i/pkg/exf/exf_getffieldrec.F
MITgcm-checkpoint68i/pkg/exf/exf_getffields.F
MITgcm-checkpoint68i/pkg/exf/exf_getfield_start.F
MITgcm-checkpoint68i/pkg/exf/exf_getforcing.F
MITgcm-checkpoint68i/pkg/exf/exf_getmonthsrec.F
MITgcm-checkpoint68i/pkg/exf/exf_getsurfacefluxes.F
MITgcm-checkpoint68i/pkg/exf/exf_getyearlyfieldname.F
MITgcm-checkpoint68i/pkg/exf/exf_init_fixed.F
MITgcm-checkpoint68i/pkg/exf/exf_init_fld.F
MITgcm-checkpoint68i/pkg/exf/exf_init_interp.F
MITgcm-checkpoint68i/pkg/exf/exf_init_varia.F
MITgcm-checkpoint68i/pkg/exf/exf_interp.F
MITgcm-checkpoint68i/pkg/exf/exf_interp_read.F
MITgcm-checkpoint68i/pkg/exf/exf_interp_uv.F
MITgcm-checkpoint68i/pkg/exf/exf_interpolate.F
MITgcm-checkpoint68i/pkg/exf/exf_mapfields.F
MITgcm-checkpoint68i/pkg/exf/exf_monitor.F
MITgcm-checkpoint68i/pkg/exf/exf_monitor_ad.F
MITgcm-checkpoint68i/pkg/exf/exf_radiation.F
MITgcm-checkpoint68i/pkg/exf/exf_readparms.F
MITgcm-checkpoint68i/pkg/exf/exf_set_fld.F
MITgcm-checkpoint68i/pkg/exf/exf_set_gen.F
MITgcm-checkpoint68i/pkg/exf/exf_set_obcs.F
MITgcm-checkpoint68i/pkg/exf/exf_set_uv.F
MITgcm-checkpoint68i/pkg/exf/exf_summary.F
MITgcm-checkpoint68i/pkg/exf/exf_swapffields.F
MITgcm-checkpoint68i/pkg/exf/exf_weight_sfx_diags.F
MITgcm-checkpoint68i/pkg/exf/exf_wind.F
MITgcm-checkpoint68i/pkg/exf/exf_zenithangle.F
MITgcm-checkpoint68i/pkg/exf/exf_zenithangle_table.F
MITgcm-checkpoint68i/pkg/fizhi/
MITgcm-checkpoint68i/pkg/fizhi/AtoC.F
MITgcm-checkpoint68i/pkg/fizhi/CtoA.F
MITgcm-checkpoint68i/pkg/fizhi/FIZHI_OPTIONS.h
MITgcm-checkpoint68i/pkg/fizhi/cah-dat.h
MITgcm-checkpoint68i/pkg/fizhi/cai-dat.h
MITgcm-checkpoint68i/pkg/fizhi/chronos.h
MITgcm-checkpoint68i/pkg/fizhi/co2-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/do_fizhi.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_SHP.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_SIZE.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_alarms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_chemistry_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_clockstuff.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagalarms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagnostics_init.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_driver.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_earth_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_fillnegs.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_gwdrag.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_chem.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_fixed.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vars.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_veg.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vegsurftiles.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_io_comms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_SIZE.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_lsm.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_lwrad.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_mnc_init.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_moist.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_mpistuff.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_ocean_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_rayleigh.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_read_pickup.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_readparms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_readwrite_vegtiles.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_step_diag.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_swrad.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_tendency_apply.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_turb.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_update_time.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_utils.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_wrapper.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_datetime.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_pickup.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_state.F
MITgcm-checkpoint68i/pkg/fizhi/getcon.F
MITgcm-checkpoint68i/pkg/fizhi/getpwhere.F
MITgcm-checkpoint68i/pkg/fizhi/h2o-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/o3-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/sibber.h
MITgcm-checkpoint68i/pkg/fizhi/slprs.F
MITgcm-checkpoint68i/pkg/fizhi/snwmid.h
MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_corr.F
MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_fg.F
MITgcm-checkpoint68i/pkg/fizhi/step_physics.F
MITgcm-checkpoint68i/pkg/fizhi/update_chemistry_exports.F
MITgcm-checkpoint68i/pkg/fizhi/update_earth_exports.F
MITgcm-checkpoint68i/pkg/fizhi/update_ocean_exports.F
MITgcm-checkpoint68i/pkg/flt/
MITgcm-checkpoint68i/pkg/flt/FLT.h
MITgcm-checkpoint68i/pkg/flt/FLT_BUFF.h
MITgcm-checkpoint68i/pkg/flt/FLT_OPTIONS.h
MITgcm-checkpoint68i/pkg/flt/FLT_SIZE.h
MITgcm-checkpoint68i/pkg/flt/README.flt
MITgcm-checkpoint68i/pkg/flt/exch2_recv_get_vec.F
MITgcm-checkpoint68i/pkg/flt/exch2_send_put_vec.F
MITgcm-checkpoint68i/pkg/flt/exch_recv_get_vec.F
MITgcm-checkpoint68i/pkg/flt/exch_send_put_vec.F
MITgcm-checkpoint68i/pkg/flt/flt_down.F
MITgcm-checkpoint68i/pkg/flt/flt_exch2.F
MITgcm-checkpoint68i/pkg/flt/flt_exchg.F
MITgcm-checkpoint68i/pkg/flt/flt_init_fixed.F
MITgcm-checkpoint68i/pkg/flt/flt_init_varia.F
MITgcm-checkpoint68i/pkg/flt/flt_interp_linear.F
MITgcm-checkpoint68i/pkg/flt/flt_main.F
MITgcm-checkpoint68i/pkg/flt/flt_mapping.F
MITgcm-checkpoint68i/pkg/flt/flt_readparms.F
MITgcm-checkpoint68i/pkg/flt/flt_runga2.F
MITgcm-checkpoint68i/pkg/flt/flt_runga4.F
MITgcm-checkpoint68i/pkg/flt/flt_traj.F
MITgcm-checkpoint68i/pkg/flt/flt_up.F
MITgcm-checkpoint68i/pkg/flt/flt_write_pickup.F
MITgcm-checkpoint68i/pkg/frazil/
MITgcm-checkpoint68i/pkg/frazil/FRAZIL.h
MITgcm-checkpoint68i/pkg/frazil/FRAZIL_OPTIONS.h
MITgcm-checkpoint68i/pkg/frazil/frazil_ad.flow
MITgcm-checkpoint68i/pkg/frazil/frazil_ad_diff.list
MITgcm-checkpoint68i/pkg/frazil/frazil_calc_rhs.F
MITgcm-checkpoint68i/pkg/frazil/frazil_description.tex
MITgcm-checkpoint68i/pkg/frazil/frazil_diagnostics_init.F
MITgcm-checkpoint68i/pkg/frazil/frazil_init_fixed.F
MITgcm-checkpoint68i/pkg/frazil/frazil_init_varia.F
MITgcm-checkpoint68i/pkg/frazil/frazil_tendency_apply.F
MITgcm-checkpoint68i/pkg/gchem/
MITgcm-checkpoint68i/pkg/gchem/GCHEM.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_FIELDS.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_OPTIONS.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_SIZE.h
MITgcm-checkpoint68i/pkg/gchem/gchem_ad_diff.list
MITgcm-checkpoint68i/pkg/gchem/gchem_add_tendency.F
MITgcm-checkpoint68i/pkg/gchem/gchem_calc_tendency.F
MITgcm-checkpoint68i/pkg/gchem/gchem_check.F
MITgcm-checkpoint68i/pkg/gchem/gchem_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gchem/gchem_fields_load.F
MITgcm-checkpoint68i/pkg/gchem/gchem_forcing_sep.F
MITgcm-checkpoint68i/pkg/gchem/gchem_init_fixed.F
MITgcm-checkpoint68i/pkg/gchem/gchem_init_vari.F
MITgcm-checkpoint68i/pkg/gchem/gchem_output.F
MITgcm-checkpoint68i/pkg/gchem/gchem_readparms.F
MITgcm-checkpoint68i/pkg/gchem/gchem_surfmean.F
MITgcm-checkpoint68i/pkg/gchem/gchem_tr_register.F
MITgcm-checkpoint68i/pkg/gchem/gchem_write_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_FLUX_LIMITER.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_OPTIONS.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_SOM_VARS.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_diff.list
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advection.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advscheme.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_calc_rhs.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_check.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_del2.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_init.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_state.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_exch_som.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_implicit_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_fixed.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_varia.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_plm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_read_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_advect.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_exchanges.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_fill_cs_corner.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_lim_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_prep_cs_corner.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3c4_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_write_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/generic_advdiff.tex
MITgcm-checkpoint68i/pkg/generic_advdiff/salt_fill.F
MITgcm-checkpoint68i/pkg/ggl90/
MITgcm-checkpoint68i/pkg/ggl90/GGL90.h
MITgcm-checkpoint68i/pkg/ggl90/GGL90_OPTIONS.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_diff.list
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_diff.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_visc.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_check.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_exchanges.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_idemix.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_fixed.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_varia.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_output.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_read_pickup.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_readparms.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_write_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/
MITgcm-checkpoint68i/pkg/gmredi/GMREDI.h
MITgcm-checkpoint68i/pkg/gmredi/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/pkg/gmredi/GMREDI_TAVE.h
MITgcm-checkpoint68i/pkg/gmredi/README_ADJOINT
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad.flow
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad_diff.list
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_bates_k.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_diff.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_eigs.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_b.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_bvp.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_qgleith.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_tensor.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_urms.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_check.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_description.tex
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_impl.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_do_exch.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_fixed.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_varia.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_mnc_init.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_output.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_read_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_readparms.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_residual_flow.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_rtransport.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_limit.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_psi.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_write_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_xtransport.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ytransport.F
MITgcm-checkpoint68i/pkg/gmredi/submeso_calc_psi.F
MITgcm-checkpoint68i/pkg/grdchk/
MITgcm-checkpoint68i/pkg/grdchk/GRDCHK_OPTIONS.h
MITgcm-checkpoint68i/pkg/grdchk/grdchk.h
MITgcm-checkpoint68i/pkg/grdchk/grdchk_check.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_description.tex
MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_obcs_mask.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_position.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_getadxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_getxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_init.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_loc.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_main.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_print.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_readparms.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_setxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_summary.F
MITgcm-checkpoint68i/pkg/gridalt/
MITgcm-checkpoint68i/pkg/gridalt/GRIDALT_OPTIONS.h
MITgcm-checkpoint68i/pkg/gridalt/dyn2phys.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_initialise.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_mapping.h
MITgcm-checkpoint68i/pkg/gridalt/gridalt_update.F
MITgcm-checkpoint68i/pkg/gridalt/make_phys_grid.F
MITgcm-checkpoint68i/pkg/gridalt/phys2dyn.F
MITgcm-checkpoint68i/pkg/icefront/
MITgcm-checkpoint68i/pkg/icefront/ICEFRONT.h
MITgcm-checkpoint68i/pkg/icefront/ICEFRONT_OPTIONS.h
MITgcm-checkpoint68i/pkg/icefront/ICFSymbol.txt
MITgcm-checkpoint68i/pkg/icefront/icefront_check.F
MITgcm-checkpoint68i/pkg/icefront/icefront_description.tex
MITgcm-checkpoint68i/pkg/icefront/icefront_diagnostics_init.F
MITgcm-checkpoint68i/pkg/icefront/icefront_init_fixed.F
MITgcm-checkpoint68i/pkg/icefront/icefront_init_varia.F
MITgcm-checkpoint68i/pkg/icefront/icefront_readparms.F
MITgcm-checkpoint68i/pkg/icefront/icefront_tendency_apply.F
MITgcm-checkpoint68i/pkg/icefront/icefront_thermodynamics.F
MITgcm-checkpoint68i/pkg/kl10/
MITgcm-checkpoint68i/pkg/kl10/KL10.h
MITgcm-checkpoint68i/pkg/kl10/KL10_DIAGS.h
MITgcm-checkpoint68i/pkg/kl10/KL10_OPTIONS.h
MITgcm-checkpoint68i/pkg/kl10/KL10_TAVE.h
MITgcm-checkpoint68i/pkg/kl10/kl10_calc.F
MITgcm-checkpoint68i/pkg/kl10/kl10_calc_diff.F
MITgcm-checkpoint68i/pkg/kl10/kl10_calc_visc.F
MITgcm-checkpoint68i/pkg/kl10/kl10_check.F
MITgcm-checkpoint68i/pkg/kl10/kl10_diagnostics_init.F
MITgcm-checkpoint68i/pkg/kl10/kl10_init_fixed.F
MITgcm-checkpoint68i/pkg/kl10/kl10_init_varia.F
MITgcm-checkpoint68i/pkg/kl10/kl10_output.F
MITgcm-checkpoint68i/pkg/kl10/kl10_readparms.F
MITgcm-checkpoint68i/pkg/kpp/
MITgcm-checkpoint68i/pkg/kpp/KPP.h
MITgcm-checkpoint68i/pkg/kpp/KPP_OPTIONS.h
MITgcm-checkpoint68i/pkg/kpp/KPP_PARAMS.h
MITgcm-checkpoint68i/pkg/kpp/KPP_TAVE.h
MITgcm-checkpoint68i/pkg/kpp/kpp_ad_diff.list
MITgcm-checkpoint68i/pkg/kpp/kpp_calc.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_ptr.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_s.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_t.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_visc.F
MITgcm-checkpoint68i/pkg/kpp/kpp_check.F
MITgcm-checkpoint68i/pkg/kpp/kpp_description.tex
MITgcm-checkpoint68i/pkg/kpp/kpp_diagnostics_init.F
MITgcm-checkpoint68i/pkg/kpp/kpp_do_exch.F
MITgcm-checkpoint68i/pkg/kpp/kpp_forcing_surf.F
MITgcm-checkpoint68i/pkg/kpp/kpp_init_fixed.F
MITgcm-checkpoint68i/pkg/kpp/kpp_init_varia.F
MITgcm-checkpoint68i/pkg/kpp/kpp_output.F
MITgcm-checkpoint68i/pkg/kpp/kpp_readparms.F
MITgcm-checkpoint68i/pkg/kpp/kpp_routines.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_ptr.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_s.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_t.F
MITgcm-checkpoint68i/pkg/land/
MITgcm-checkpoint68i/pkg/land/LAND_OPTIONS.h
MITgcm-checkpoint68i/pkg/land/LAND_PARAMS.h
MITgcm-checkpoint68i/pkg/land/LAND_SIZE.h
MITgcm-checkpoint68i/pkg/land/LAND_TAVE.h
MITgcm-checkpoint68i/pkg/land/LAND_VARS.h
MITgcm-checkpoint68i/pkg/land/land_albedo.F
MITgcm-checkpoint68i/pkg/land/land_check.F
MITgcm-checkpoint68i/pkg/land/land_diagnostics_init.F
MITgcm-checkpoint68i/pkg/land/land_diagnostics_state.F
MITgcm-checkpoint68i/pkg/land/land_do_diags.F
MITgcm-checkpoint68i/pkg/land/land_impl_temp.F
MITgcm-checkpoint68i/pkg/land/land_ini_vars.F
MITgcm-checkpoint68i/pkg/land/land_init_fixed.F
MITgcm-checkpoint68i/pkg/land/land_mnc_init.F
MITgcm-checkpoint68i/pkg/land/land_monitor.F
MITgcm-checkpoint68i/pkg/land/land_output.F
MITgcm-checkpoint68i/pkg/land/land_read_pickup.F
MITgcm-checkpoint68i/pkg/land/land_readparms.F
MITgcm-checkpoint68i/pkg/land/land_stepfwd.F
MITgcm-checkpoint68i/pkg/land/land_write_pickup.F
MITgcm-checkpoint68i/pkg/layers/
MITgcm-checkpoint68i/pkg/layers/LAYERS.h
MITgcm-checkpoint68i/pkg/layers/LAYERS_OPTIONS.h
MITgcm-checkpoint68i/pkg/layers/LAYERS_SIZE.h
MITgcm-checkpoint68i/pkg/layers/layers_ad_diff.list
MITgcm-checkpoint68i/pkg/layers/layers_calc.F
MITgcm-checkpoint68i/pkg/layers/layers_check.F
MITgcm-checkpoint68i/pkg/layers/layers_diagnostics_init.F
MITgcm-checkpoint68i/pkg/layers/layers_fluxcalc.F
MITgcm-checkpoint68i/pkg/layers/layers_init_fixed.F
MITgcm-checkpoint68i/pkg/layers/layers_init_varia.F
MITgcm-checkpoint68i/pkg/layers/layers_mnc_init.F
MITgcm-checkpoint68i/pkg/layers/layers_output.F
MITgcm-checkpoint68i/pkg/layers/layers_readparms.F
MITgcm-checkpoint68i/pkg/layers/layers_save.F
MITgcm-checkpoint68i/pkg/layers/layers_thermodynamics.F
MITgcm-checkpoint68i/pkg/layers/layers_wsurf_tr.F
MITgcm-checkpoint68i/pkg/longstep/
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP.h
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_OPTIONS.h
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_PARAMS.h
MITgcm-checkpoint68i/pkg/longstep/README
MITgcm-checkpoint68i/pkg/longstep/longstep_average.F
MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d_fac.F
MITgcm-checkpoint68i/pkg/longstep/longstep_check_iters.F
MITgcm-checkpoint68i/pkg/longstep/longstep_correction_step.F
MITgcm-checkpoint68i/pkg/longstep/longstep_diagnostics_init.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_fac.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_rs.F
MITgcm-checkpoint68i/pkg/longstep/longstep_forcing_surf.F
MITgcm-checkpoint68i/pkg/longstep/longstep_init_fixed.F
MITgcm-checkpoint68i/pkg/longstep/longstep_init_varia.F
MITgcm-checkpoint68i/pkg/longstep/longstep_readparms.F
MITgcm-checkpoint68i/pkg/longstep/longstep_reset_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_thermodynamics.F
MITgcm-checkpoint68i/pkg/matrix/
MITgcm-checkpoint68i/pkg/matrix/MATRIX.h
MITgcm-checkpoint68i/pkg/matrix/MATRIX_OPTIONS.h
MITgcm-checkpoint68i/pkg/matrix/matrix_init_varia.F
MITgcm-checkpoint68i/pkg/matrix/matrix_output.F
MITgcm-checkpoint68i/pkg/matrix/matrix_readparms.F
MITgcm-checkpoint68i/pkg/matrix/matrix_store_tendency.F
MITgcm-checkpoint68i/pkg/matrix/matrix_write_grid.F
MITgcm-checkpoint68i/pkg/matrix/matrix_write_tendency.F
MITgcm-checkpoint68i/pkg/mdsio/
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_3D.h
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_WH.h
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_OPTIONS.h
MITgcm-checkpoint68i/pkg/mdsio/mdsio_ad.flow
MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertorl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_check4file.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_facef_read.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl_slice.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rs.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_meta.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_section.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_tape.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_whalos.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_readvec_loc.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_slice.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_segxtorx_2d.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_metafiles.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rs.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_meta.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_section.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_tape.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_whalos.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_writelocal.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_writevec_loc.F
MITgcm-checkpoint68i/pkg/mnc/
MITgcm-checkpoint68i/pkg/mnc/CPP_OPTIONS.t
MITgcm-checkpoint68i/pkg/mnc/MNC_BUFF.h
MITgcm-checkpoint68i/pkg/mnc/MNC_COMMON.h
MITgcm-checkpoint68i/pkg/mnc/MNC_OPTIONS.h
MITgcm-checkpoint68i/pkg/mnc/MNC_PARAMS.h
MITgcm-checkpoint68i/pkg/mnc/MNC_SIZE.h
MITgcm-checkpoint68i/pkg/mnc/Makefile
MITgcm-checkpoint68i/pkg/mnc/PACKAGES_CONFIG.t
MITgcm-checkpoint68i/pkg/mnc/README.txt
MITgcm-checkpoint68i/pkg/mnc/SIZE.t
MITgcm-checkpoint68i/pkg/mnc/TESTING_README.txt
MITgcm-checkpoint68i/pkg/mnc/build_netcdf_stubs
MITgcm-checkpoint68i/pkg/mnc/mnc_ad.flow
MITgcm-checkpoint68i/pkg/mnc/mnc_create_dir.c
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_citer.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_cvars.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_fsize.c
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_init.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_missingvals.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_model_attr.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_readwrite.template
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_udim.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_write_grid_info.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cwrapper.F
MITgcm-checkpoint68i/pkg/mnc/mnc_description.tex
MITgcm-checkpoint68i/pkg/mnc/mnc_dim.F
MITgcm-checkpoint68i/pkg/mnc/mnc_dump.F
MITgcm-checkpoint68i/pkg/mnc/mnc_file.F
MITgcm-checkpoint68i/pkg/mnc/mnc_grid.F
MITgcm-checkpoint68i/pkg/mnc/mnc_init.F
MITgcm-checkpoint68i/pkg/mnc/mnc_readparms.F
MITgcm-checkpoint68i/pkg/mnc/mnc_test_001.T
MITgcm-checkpoint68i/pkg/mnc/mnc_test_002.T
MITgcm-checkpoint68i/pkg/mnc/mnc_test_utils.T
MITgcm-checkpoint68i/pkg/mnc/mnc_update_time.F
MITgcm-checkpoint68i/pkg/mnc/mnc_utils.F
MITgcm-checkpoint68i/pkg/mnc/mnc_var.F
MITgcm-checkpoint68i/pkg/mnc/parse_local_info
MITgcm-checkpoint68i/pkg/mnc/pre-defined_grids.txt
MITgcm-checkpoint68i/pkg/mom_common/
MITgcm-checkpoint68i/pkg/mom_common/MOM_COMMON_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_common/MOM_VISC.h
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_3d_strain.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_absvort3.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hdiv.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hfacz.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_ke.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_relvort3.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_strain.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_tension.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_visc.F
MITgcm-checkpoint68i/pkg/mom_common/mom_common_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_common/mom_diagnostics_init.F
MITgcm-checkpoint68i/pkg/mom_common/mom_hdissip.F
MITgcm-checkpoint68i/pkg/mom_common/mom_init_fixed.F
MITgcm-checkpoint68i/pkg/mom_common/mom_quasihydrostatic.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_botdrag_coeff.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_implicit_r.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_rviscflux.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_uv_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_botdrag_coeff.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_implicit_r.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_rviscflux.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_limit.F
MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_stretch.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_fluxform/
MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM.h
MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_calc_rtrans.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_uu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_vu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_wu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_coriolis.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_del2u.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_cylinder.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_sphere.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_xviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_yviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_uv_boundary.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_uv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_vv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_wv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_coriolis.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_del2v.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_cylinder.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_sphere.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_xviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_yviscflux.F
MITgcm-checkpoint68i/pkg/mom_vecinv/
MITgcm-checkpoint68i/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_del2uv.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_hdissip.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_grad_ke.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_vertshear.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_grad_ke.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_vertshear.F
MITgcm-checkpoint68i/pkg/monitor/
MITgcm-checkpoint68i/pkg/monitor/MONITOR.h
MITgcm-checkpoint68i/pkg/monitor/MONITOR_OPTIONS.h
MITgcm-checkpoint68i/pkg/monitor/mon_advcfl.F
MITgcm-checkpoint68i/pkg/monitor/mon_advcflw.F
MITgcm-checkpoint68i/pkg/monitor/mon_advcflw2.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_advcfl.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_description.tex
MITgcm-checkpoint68i/pkg/monitor/mon_init.F
MITgcm-checkpoint68i/pkg/monitor/mon_ke.F
MITgcm-checkpoint68i/pkg/monitor/mon_out.F
MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_set_iounit.F
MITgcm-checkpoint68i/pkg/monitor/mon_set_pref.F
MITgcm-checkpoint68i/pkg/monitor/mon_solution.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_latbnd_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_surfcor.F
MITgcm-checkpoint68i/pkg/monitor/mon_vort3.F
MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rs.F
MITgcm-checkpoint68i/pkg/monitor/monitor.F
MITgcm-checkpoint68i/pkg/monitor/monitor_ad.F
MITgcm-checkpoint68i/pkg/monitor/monitor_ad.flow
MITgcm-checkpoint68i/pkg/monitor/monitor_description.tex
MITgcm-checkpoint68i/pkg/monitor/monitor_g.F
MITgcm-checkpoint68i/pkg/my82/
MITgcm-checkpoint68i/pkg/my82/MY82.h
MITgcm-checkpoint68i/pkg/my82/MY82_OPTIONS.h
MITgcm-checkpoint68i/pkg/my82/my82_calc.F
MITgcm-checkpoint68i/pkg/my82/my82_calc_diff.F
MITgcm-checkpoint68i/pkg/my82/my82_calc_visc.F
MITgcm-checkpoint68i/pkg/my82/my82_check.F
MITgcm-checkpoint68i/pkg/my82/my82_diagnostics_init.F
MITgcm-checkpoint68i/pkg/my82/my82_init_fixed.F
MITgcm-checkpoint68i/pkg/my82/my82_init_varia.F
MITgcm-checkpoint68i/pkg/my82/my82_output.F
MITgcm-checkpoint68i/pkg/my82/my82_readparms.F
MITgcm-checkpoint68i/pkg/my82/my82_ri_number.F
MITgcm-checkpoint68i/pkg/mypackage/
MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE.h
MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE_OPTIONS.h
MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad.flow
MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad_diff.list
MITgcm-checkpoint68i/pkg/mypackage/mypackage_calc_rhs.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_check.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_description.tex
MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_init.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_state.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_fixed.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_varia.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_mnc_init.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_read_pickup.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_readparms.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_tendency_apply.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_write_pickup.F
MITgcm-checkpoint68i/pkg/obcs/
MITgcm-checkpoint68i/pkg/obcs/OBCS_FIELDS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_GRID.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_OPTIONS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_PARAMS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_PTRACERS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_SEAICE.h
MITgcm-checkpoint68i/pkg/obcs/ORLANSKI.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad.flow
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_diff.list
MITgcm-checkpoint68i/pkg/obcs/obcs_add_tides.F
MITgcm-checkpoint68i/pkg/obcs/obcs_adjust.F
MITgcm-checkpoint68i/pkg/obcs/obcs_adjust_uvice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_eta.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ptracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_r_star.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_seaice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_surf_dr.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ts.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uv.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uvice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_w.F
MITgcm-checkpoint68i/pkg/obcs/obcs_balance_flow.F
MITgcm-checkpoint68i/pkg/obcs/obcs_calc.F
MITgcm-checkpoint68i/pkg/obcs/obcs_calc_stevens.F
MITgcm-checkpoint68i/pkg/obcs/obcs_check.F
MITgcm-checkpoint68i/pkg/obcs/obcs_check_depths.F
MITgcm-checkpoint68i/pkg/obcs/obcs_copy_tracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_copy_uv_n.F
MITgcm-checkpoint68i/pkg/obcs/obcs_description.tex
MITgcm-checkpoint68i/pkg/obcs/obcs_diag_balance.F
MITgcm-checkpoint68i/pkg/obcs/obcs_exchanges.F
MITgcm-checkpoint68i/pkg/obcs/obcs_exf_load.F
MITgcm-checkpoint68i/pkg/obcs/obcs_fields_load.F
MITgcm-checkpoint68i/pkg/obcs/obcs_init_fixed.F
MITgcm-checkpoint68i/pkg/obcs/obcs_init_variables.F
MITgcm-checkpoint68i/pkg/obcs/obcs_mon_stats.F
MITgcm-checkpoint68i/pkg/obcs/obcs_monitor.F
MITgcm-checkpoint68i/pkg/obcs/obcs_output.F
MITgcm-checkpoint68i/pkg/obcs/obcs_prescribe_read.F
MITgcm-checkpoint68i/pkg/obcs/obcs_read_pickup.F
MITgcm-checkpoint68i/pkg/obcs/obcs_readparms.F
MITgcm-checkpoint68i/pkg/obcs/obcs_save_uv_n.F
MITgcm-checkpoint68i/pkg/obcs/obcs_seaice_sponge.F
MITgcm-checkpoint68i/pkg/obcs/obcs_set_connect.F
MITgcm-checkpoint68i/pkg/obcs/obcs_sponge.F
MITgcm-checkpoint68i/pkg/obcs/obcs_u1_adv_tracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_write_pickup.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_east.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_init.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_north.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_south.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_west.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/
MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_PARAMS.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_TAVE.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCNCPL.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCN_CPL_OPTIONS.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_exch_configs.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_export_import_data.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_import_cplparms.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_ini_vars.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init_fixed.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_output.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_readparms.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_register.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_write_pickup.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_apply_import.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_check_cplconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_diags.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_read_pickup.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_data.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_fields.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_ocnconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_atmconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_fields.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_store_my_data.F
MITgcm-checkpoint68i/pkg/offline/
MITgcm-checkpoint68i/pkg/offline/OFFLINE.h
MITgcm-checkpoint68i/pkg/offline/OFFLINE_OPTIONS.h
MITgcm-checkpoint68i/pkg/offline/OFFLINE_SWITCH.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_diff.list
MITgcm-checkpoint68i/pkg/offline/offline_check.F
MITgcm-checkpoint68i/pkg/offline/offline_fields_load.F
MITgcm-checkpoint68i/pkg/offline/offline_get_diffus.F
MITgcm-checkpoint68i/pkg/offline/offline_init_varia.F
MITgcm-checkpoint68i/pkg/offline/offline_readparms.F
MITgcm-checkpoint68i/pkg/offline/offline_reset_parms.F
MITgcm-checkpoint68i/pkg/openad/
MITgcm-checkpoint68i/pkg/openad/OPENAD_OPTIONS.h
MITgcm-checkpoint68i/pkg/openad/ad_s_different_multiple.F
MITgcm-checkpoint68i/pkg/openad/ad_s_ifnblnk.F
MITgcm-checkpoint68i/pkg/openad/ad_s_ilnblnk.F
MITgcm-checkpoint68i/pkg/openad/ad_s_mds_reclen.F
MITgcm-checkpoint68i/pkg/openad/externalDummies.F
MITgcm-checkpoint68i/pkg/openad/findAndDiff.bash
MITgcm-checkpoint68i/pkg/openad/inner_do_loop.F
MITgcm-checkpoint68i/pkg/openad/openad_ad_diff.list
MITgcm-checkpoint68i/pkg/openad/openad_checkpointInit.F
MITgcm-checkpoint68i/pkg/openad/openad_dumpAdjoint.F
MITgcm-checkpoint68i/pkg/openad/seawater.F
MITgcm-checkpoint68i/pkg/openad/the_model_main.F
MITgcm-checkpoint68i/pkg/opps/
MITgcm-checkpoint68i/pkg/opps/OPPS.h
MITgcm-checkpoint68i/pkg/opps/OPPS_OPTIONS.h
MITgcm-checkpoint68i/pkg/opps/opps_calc.F
MITgcm-checkpoint68i/pkg/opps/opps_check.F
MITgcm-checkpoint68i/pkg/opps/opps_init.F
MITgcm-checkpoint68i/pkg/opps/opps_interface.F
MITgcm-checkpoint68i/pkg/opps/opps_readparms.F
MITgcm-checkpoint68i/pkg/pkg_depend
MITgcm-checkpoint68i/pkg/pkg_groups
MITgcm-checkpoint68i/pkg/pp81/
MITgcm-checkpoint68i/pkg/pp81/PP81.h
MITgcm-checkpoint68i/pkg/pp81/PP81_OPTIONS.h
MITgcm-checkpoint68i/pkg/pp81/pp81_calc.F
MITgcm-checkpoint68i/pkg/pp81/pp81_calc_diff.F
MITgcm-checkpoint68i/pkg/pp81/pp81_calc_visc.F
MITgcm-checkpoint68i/pkg/pp81/pp81_check.F
MITgcm-checkpoint68i/pkg/pp81/pp81_diagnostics_init.F
MITgcm-checkpoint68i/pkg/pp81/pp81_init_fixed.F
MITgcm-checkpoint68i/pkg/pp81/pp81_init_varia.F
MITgcm-checkpoint68i/pkg/pp81/pp81_output.F
MITgcm-checkpoint68i/pkg/pp81/pp81_readparms.F
MITgcm-checkpoint68i/pkg/pp81/pp81_ri_number.F
MITgcm-checkpoint68i/pkg/profiles/
MITgcm-checkpoint68i/pkg/profiles/PROFILES_OPTIONS.h
MITgcm-checkpoint68i/pkg/profiles/PROFILES_SIZE.h
MITgcm-checkpoint68i/pkg/profiles/active_file_control_profiles.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.flow
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_ad.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_g.F
MITgcm-checkpoint68i/pkg/profiles/cost_profiles.F
MITgcm-checkpoint68i/pkg/profiles/profiles.flow
MITgcm-checkpoint68i/pkg/profiles/profiles.h
MITgcm-checkpoint68i/pkg/profiles/profiles_ad_diff.list
MITgcm-checkpoint68i/pkg/profiles/profiles_findunit.F
MITgcm-checkpoint68i/pkg/profiles/profiles_ini_io.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_fixed.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_ncfile.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_varia.F
MITgcm-checkpoint68i/pkg/profiles/profiles_inloop.F
MITgcm-checkpoint68i/pkg/profiles/profiles_interp.F
MITgcm-checkpoint68i/pkg/profiles/profiles_readparms.F
MITgcm-checkpoint68i/pkg/profiles/profiles_readvector.F
MITgcm-checkpoint68i/pkg/ptracers/
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_FIELDS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_MOD.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_OPTIONS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_PARAMS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_SIZE.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_START.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_TAVE.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad.flow
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_diff.list
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_dump.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_adcommon.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_apply_forcing.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_calc_wsurf_tr.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_check.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_check_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_convect.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_debug.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_state.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_data_mod.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_mod.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_fields_blocking_exch.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_forcing_surf.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_fixed.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_varia.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_integrate.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_mnc_init.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor_ad.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_output.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_read_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_readparms.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_reset.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_set_iolabel.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_switch_onoff.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_timeave.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_turnoff_io.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_state.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_timeave.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_zonal_filt_apply.F
MITgcm-checkpoint68i/pkg/rbcs/
MITgcm-checkpoint68i/pkg/rbcs/RBCS_FIELDS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_OPTIONS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_PARAMS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_SIZE.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_diff.list
MITgcm-checkpoint68i/pkg/rbcs/rbcs_add_tendency.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_fields_load.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_fixed.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_varia.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_readparms.F
MITgcm-checkpoint68i/pkg/regrid/
MITgcm-checkpoint68i/pkg/regrid/Makefile
MITgcm-checkpoint68i/pkg/regrid/REGRID.h
MITgcm-checkpoint68i/pkg/regrid/REGRID_OPTIONS.h
MITgcm-checkpoint68i/pkg/regrid/REGRID_SIZE.h
MITgcm-checkpoint68i/pkg/regrid/regrid_check.F
MITgcm-checkpoint68i/pkg/regrid/regrid_description.tex
MITgcm-checkpoint68i/pkg/regrid/regrid_init_fixed.F
MITgcm-checkpoint68i/pkg/regrid/regrid_init_varia.F
MITgcm-checkpoint68i/pkg/regrid/regrid_mnc_init.F
MITgcm-checkpoint68i/pkg/regrid/regrid_readparms.F
MITgcm-checkpoint68i/pkg/regrid/regrid_scalar_out.template
MITgcm-checkpoint68i/pkg/runclock/
MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK.h
MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK_OPTIONS.h
MITgcm-checkpoint68i/pkg/runclock/runclock_check.F
MITgcm-checkpoint68i/pkg/runclock/runclock_continue.F
MITgcm-checkpoint68i/pkg/runclock/runclock_gettime.F
MITgcm-checkpoint68i/pkg/runclock/runclock_init.F
MITgcm-checkpoint68i/pkg/runclock/runclock_readparms.F
MITgcm-checkpoint68i/pkg/rw/
MITgcm-checkpoint68i/pkg/rw/RW_MFLDS.h
MITgcm-checkpoint68i/pkg/rw/RW_OPTIONS.h
MITgcm-checkpoint68i/pkg/rw/get_write_global_fld.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rl.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rs.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rl.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rs.F
MITgcm-checkpoint68i/pkg/rw/read_glvec_rl.F
MITgcm-checkpoint68i/pkg/rw/read_glvec_rs.F
MITgcm-checkpoint68i/pkg/rw/read_mflds.F
MITgcm-checkpoint68i/pkg/rw/read_rec.F
MITgcm-checkpoint68i/pkg/rw/rw_ad.flow
MITgcm-checkpoint68i/pkg/rw/rw_ad_diff.list
MITgcm-checkpoint68i/pkg/rw/rw_get_suffix.F
MITgcm-checkpoint68i/pkg/rw/set_write_global_fld.F
MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rs.F
MITgcm-checkpoint68i/pkg/rw/write_glvec_rl.F
MITgcm-checkpoint68i/pkg/rw/write_glvec_rs.F
MITgcm-checkpoint68i/pkg/rw/write_local_rl.F
MITgcm-checkpoint68i/pkg/rw/write_local_rs.F
MITgcm-checkpoint68i/pkg/rw/write_rec.F
MITgcm-checkpoint68i/pkg/salt_plume/
MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME.h
MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME_OPTIONS.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_diff.list
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_apply.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_calc_depth.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_check.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_description.tex
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_init.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_do_exch.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_forcing_surf.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_frac.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_fixed.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_varia.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_mnc_init.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_readparms.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_s.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_t.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_volfrac.F
MITgcm-checkpoint68i/pkg/sbo/
MITgcm-checkpoint68i/pkg/sbo/SBO.h
MITgcm-checkpoint68i/pkg/sbo/SBO_OPTIONS.h
MITgcm-checkpoint68i/pkg/sbo/sbo_calc.F
MITgcm-checkpoint68i/pkg/sbo/sbo_check.F
MITgcm-checkpoint68i/pkg/sbo/sbo_description.tex
MITgcm-checkpoint68i/pkg/sbo/sbo_output.F
MITgcm-checkpoint68i/pkg/sbo/sbo_readparms.F
MITgcm-checkpoint68i/pkg/sbo/sbo_rho.F
MITgcm-checkpoint68i/pkg/seaice/
MITgcm-checkpoint68i/pkg/seaice/SEAICE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_COST.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_PARAMS.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_SIZE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_TAVE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_TRACER.h
MITgcm-checkpoint68i/pkg/seaice/advect.F
MITgcm-checkpoint68i/pkg/seaice/cost_ice_test.F
MITgcm-checkpoint68i/pkg/seaice/diffus.F
MITgcm-checkpoint68i/pkg/seaice/dynsolver.F
MITgcm-checkpoint68i/pkg/seaice/lsr.F
MITgcm-checkpoint68i/pkg/seaice/ostres.F
MITgcm-checkpoint68i/pkg/seaice/seaice.flow
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_diff.list
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_dump.F
MITgcm-checkpoint68i/pkg/seaice/seaice_advdiff.F
MITgcm-checkpoint68i/pkg/seaice/seaice_advection.F
MITgcm-checkpoint68i/pkg/seaice/seaice_bottomdrag_coeffs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_budget_ocean.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_ice_strength.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_lhs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_residual.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_rhs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_strainrates.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_stressdiv.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_viscosities.F
MITgcm-checkpoint68i/pkg/seaice/seaice_check.F
MITgcm-checkpoint68i/pkg/seaice/seaice_check_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_accumulate_mean.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_areasst.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_concentration.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_driver.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_export.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_final.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_fixed.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_varia.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sensi.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sss.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sst.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_weights.F
MITgcm-checkpoint68i/pkg/seaice/seaice_ctrl_map_ini.F
MITgcm-checkpoint68i/pkg/seaice/seaice_description.tex
MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_init.F
MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/seaice/seaice_diffusion.F
MITgcm-checkpoint68i/pkg/seaice/seaice_do_ridging.F
MITgcm-checkpoint68i/pkg/seaice/seaice_dynsolver.F
MITgcm-checkpoint68i/pkg/seaice/seaice_evp.F
MITgcm-checkpoint68i/pkg/seaice/seaice_fake.F
MITgcm-checkpoint68i/pkg/seaice/seaice_fgmres.F
MITgcm-checkpoint68i/pkg/seaice/seaice_freedrift.F
MITgcm-checkpoint68i/pkg/seaice/seaice_get_dynforcing.F
MITgcm-checkpoint68i/pkg/seaice/seaice_growth.F
MITgcm-checkpoint68i/pkg/seaice/seaice_growth_adx.F
MITgcm-checkpoint68i/pkg/seaice/seaice_init_fixed.F
MITgcm-checkpoint68i/pkg/seaice/seaice_init_varia.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_redist.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_remap.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_sum.F
MITgcm-checkpoint68i/pkg/seaice/seaice_jacvec.F
MITgcm-checkpoint68i/pkg/seaice/seaice_jfnk.F
MITgcm-checkpoint68i/pkg/seaice/seaice_krylov.F
MITgcm-checkpoint68i/pkg/seaice/seaice_lsr.F
MITgcm-checkpoint68i/pkg/seaice/seaice_map_thsice.F
MITgcm-checkpoint68i/pkg/seaice/seaice_mnc_init.F
MITgcm-checkpoint68i/pkg/seaice/seaice_model.F
MITgcm-checkpoint68i/pkg/seaice/seaice_mom_advection.F
MITgcm-checkpoint68i/pkg/seaice/seaice_monitor.F
MITgcm-checkpoint68i/pkg/seaice/seaice_monitor_ad.F
MITgcm-checkpoint68i/pkg/seaice/seaice_obcs_output.F
MITgcm-checkpoint68i/pkg/seaice/seaice_ocean_stress.F
MITgcm-checkpoint68i/pkg/seaice/seaice_oceandrag_coeffs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_output.F
MITgcm-checkpoint68i/pkg/seaice/seaice_preconditioner.F
MITgcm-checkpoint68i/pkg/seaice/seaice_prepare_ridging.F
MITgcm-checkpoint68i/pkg/seaice/seaice_read_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_readparms.F
MITgcm-checkpoint68i/pkg/seaice/seaice_reg_ridge.F
MITgcm-checkpoint68i/pkg/seaice/seaice_solve4temp.F
MITgcm-checkpoint68i/pkg/seaice/seaice_summary.F
MITgcm-checkpoint68i/pkg/seaice/seaice_tracer_phys.F
MITgcm-checkpoint68i/pkg/seaice/seaice_turnoff_io.F
MITgcm-checkpoint68i/pkg/seaice/seaice_write_pickup.F
MITgcm-checkpoint68i/pkg/shap_filt/
MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT.h
MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT_OPTIONS.h
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_ad_diff.list
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_ts.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_uv.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_computvort.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_diagnostics_init.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_init_fixed.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_readparms.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_relvort3.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s1.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s2.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s4.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracerold.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_u.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s1.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2c.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s4.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_v.F
MITgcm-checkpoint68i/pkg/shelfice/
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_COST.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_TAVE.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_diff.list
MITgcm-checkpoint68i/pkg/shelfice/shelfice_check.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_accumulate.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_final.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_shifwflx.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_diagnostics_drag.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing_surf.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_depths.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_fixed.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_varia.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_mask_seaice.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_mnc_init.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_output.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_read_pickup.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_readparms.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_c_mask.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_calc_w.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_state.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_uv_mask.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remeshing.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_step_icemass.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_thermodynamics.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_u_drag_coeff.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_v_drag_coeff.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_write_pickup.F
MITgcm-checkpoint68i/pkg/showflops/
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS.h
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_INIT.h
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_OPTIONS.h
MITgcm-checkpoint68i/pkg/showflops/showflops_ad.flow
MITgcm-checkpoint68i/pkg/showflops/showflops_init.F
MITgcm-checkpoint68i/pkg/showflops/showflops_inloop.F
MITgcm-checkpoint68i/pkg/showflops/showflops_insolve.F
MITgcm-checkpoint68i/pkg/smooth/
MITgcm-checkpoint68i/pkg/smooth/SMOOTH.h
MITgcm-checkpoint68i/pkg/smooth/SMOOTH_OPTIONS.h
MITgcm-checkpoint68i/pkg/smooth/smooth2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_ad_diff.list
MITgcm-checkpoint68i/pkg/smooth/smooth_basic2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_check.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl2dw.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_description.tex
MITgcm-checkpoint68i/pkg/smooth/smooth_diff2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_diff3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_hetero2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_impldiff.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init_fixed.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init_varia.F
MITgcm-checkpoint68i/pkg/smooth/smooth_readparms.F
MITgcm-checkpoint68i/pkg/smooth/smooth_rhs.F
MITgcm-checkpoint68i/pkg/sphere/
MITgcm-checkpoint68i/pkg/sphere/exch_all_2d_rl.F
MITgcm-checkpoint68i/pkg/sphere/sphere.F
MITgcm-checkpoint68i/pkg/sphere/sphere.h
MITgcm-checkpoint68i/pkg/sphere/sphere_ad.flow
MITgcm-checkpoint68i/pkg/sphere/sphere_ad_diff.list
MITgcm-checkpoint68i/pkg/streamice/
MITgcm-checkpoint68i/pkg/streamice/STREAMICE.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_ADV.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_BDRY.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CG.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CTRL_FLUX.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_PETSC.h
MITgcm-checkpoint68i/pkg/streamice/adstreamice_cg_solve.F
MITgcm-checkpoint68i/pkg/streamice/adstreamice_invert_surf_forthick.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_prime_streamice.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice_prime.F
MITgcm-checkpoint68i/pkg/streamice/phi_gl_streamice.F
MITgcm-checkpoint68i/pkg/streamice/slope_limiter.F
MITgcm-checkpoint68i/pkg/streamice/streamice.flow
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_diff.list
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_x.F
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_y.F
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_front.F
MITgcm-checkpoint68i/pkg/streamice/streamice_advect_2dtracer.F
MITgcm-checkpoint68i/pkg/streamice/streamice_advect_thickness.F
MITgcm-checkpoint68i/pkg/streamice/streamice_apply_flux_ctrl.F
MITgcm-checkpoint68i/pkg/streamice/streamice_bstress_exponent.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_functions.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_matfree.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_wrapper.F
MITgcm-checkpoint68i/pkg/streamice/streamice_check.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cost_surf_accum.F
MITgcm-checkpoint68i/pkg/streamice/streamice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_fd.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_ppm.F
MITgcm-checkpoint68i/pkg/streamice/streamice_dump.F
MITgcm-checkpoint68i/pkg/streamice/streamice_dump_ad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_fields_load.F
MITgcm-checkpoint68i/pkg/streamice/streamice_finalize_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_forced_buttress.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_fp_err_oad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_fp_err.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err_oad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_diagnostics.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_fixed.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_phi.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_varia.F
MITgcm-checkpoint68i/pkg/streamice/streamice_initialise_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_invert_surf_forthick.F
MITgcm-checkpoint68i/pkg/streamice/streamice_petsc_numerate.F
MITgcm-checkpoint68i/pkg/streamice/streamice_petscmatdestroy.F
MITgcm-checkpoint68i/pkg/streamice/streamice_read_pickup.F
MITgcm-checkpoint68i/pkg/streamice/streamice_readparms.F
MITgcm-checkpoint68i/pkg/streamice/streamice_taub.F
MITgcm-checkpoint68i/pkg/streamice/streamice_timestep.F
MITgcm-checkpoint68i/pkg/streamice/streamice_tridiag_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_upd_ffrac_uncoupled.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phi.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phistage.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve_openad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_velmask_upd.F
MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta.F
MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta_hybrid.F
MITgcm-checkpoint68i/pkg/streamice/streamice_write_pickup.F
MITgcm-checkpoint68i/pkg/thsice/
MITgcm-checkpoint68i/pkg/thsice/THSICE_COST.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_DEBUG.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_PARAMS.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_SIZE.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_TAVE.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_VARS.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad.flow
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_diff.list
MITgcm-checkpoint68i/pkg/thsice/thsice_advdiff.F
MITgcm-checkpoint68i/pkg/thsice/thsice_advection.F
MITgcm-checkpoint68i/pkg/thsice/thsice_albedo.F
MITgcm-checkpoint68i/pkg/thsice/thsice_ave.F
MITgcm-checkpoint68i/pkg/thsice/thsice_balance_frw.F
MITgcm-checkpoint68i/pkg/thsice/thsice_calc_thickn.F
MITgcm-checkpoint68i/pkg/thsice/thsice_check.F
MITgcm-checkpoint68i/pkg/thsice/thsice_check_conserv.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_driver.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_final.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_init_varia.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_test.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_init.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diffusion.F
MITgcm-checkpoint68i/pkg/thsice/thsice_do_advect.F
MITgcm-checkpoint68i/pkg/thsice/thsice_do_exch.F
MITgcm-checkpoint68i/pkg/thsice/thsice_extend.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_bulkf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_exf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_ocean.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_precip.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_velocity.F
MITgcm-checkpoint68i/pkg/thsice/thsice_impl_temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_ini_vars.F
MITgcm-checkpoint68i/pkg/thsice/thsice_init_fixed.F
MITgcm-checkpoint68i/pkg/thsice/thsice_main.F
MITgcm-checkpoint68i/pkg/thsice/thsice_map_exf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_mnc_init.F
MITgcm-checkpoint68i/pkg/thsice/thsice_monitor.F
MITgcm-checkpoint68i/pkg/thsice/thsice_output.F
MITgcm-checkpoint68i/pkg/thsice/thsice_read_pickup.F
MITgcm-checkpoint68i/pkg/thsice/thsice_readparms.F
MITgcm-checkpoint68i/pkg/thsice/thsice_reshape_layers.F
MITgcm-checkpoint68i/pkg/thsice/thsice_salt_plume.F
MITgcm-checkpoint68i/pkg/thsice/thsice_slab_ocean.F
MITgcm-checkpoint68i/pkg/thsice/thsice_solve4temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_step_fwd.F
MITgcm-checkpoint68i/pkg/thsice/thsice_step_temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_test_addfluid.h
MITgcm-checkpoint68i/pkg/thsice/thsice_turnoff_io.F
MITgcm-checkpoint68i/pkg/thsice/thsice_write_pickup.F
MITgcm-checkpoint68i/pkg/timeave/
MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_OPTIONS.h
MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_STATV.h
MITgcm-checkpoint68i/pkg/timeave/timeave_ad_diff.list
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1k1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1vfc.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2v.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2vfc.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_dif_1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumulate.F
MITgcm-checkpoint68i/pkg/timeave/timeave_description.tex
MITgcm-checkpoint68i/pkg/timeave/timeave_init_fixed.F
MITgcm-checkpoint68i/pkg/timeave/timeave_norma_2v.F
MITgcm-checkpoint68i/pkg/timeave/timeave_normalize.F
MITgcm-checkpoint68i/pkg/timeave/timeave_reset.F
MITgcm-checkpoint68i/pkg/timeave/timeave_statv_write.F
MITgcm-checkpoint68i/pkg/timeave/timeave_statvars.F
MITgcm-checkpoint68i/pkg/timeave/timeave_surf_flux.F
MITgcm-checkpoint68i/pkg/zonal_filt/
MITgcm-checkpoint68i/pkg/zonal_filt/FFTPACK.h
MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT.h
MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT_OPTIONS.h
MITgcm-checkpoint68i/pkg/zonal_filt/fftpack.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_ts.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_uv.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_init.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_nofill.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_postsmooth.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_presmooth.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_readparms.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filter.F
MITgcm-checkpoint68i/tools/
MITgcm-checkpoint68i/tools/OAD_support/
MITgcm-checkpoint68i/tools/OAD_support/OAD_active.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_cp.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_regular_cp.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_rev.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_tape.F90
MITgcm-checkpoint68i/tools/OAD_support/ad_inline.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xy.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xyz.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_write_xy.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.dummy_in_stepping.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rl.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rs.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_max_r8.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_r8.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_tile_rl.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.regular.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.revolve.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.sa_cg2d.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.split.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.split_non_anonymous.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_cg_solve.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_fp_err_oad.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_vel_resid_err_oad.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_invert_surf_forthick.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_smooth_adjoint_field.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_vel_phistage.F
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.awk
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.csh
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.awk
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.csh
MITgcm-checkpoint68i/tools/OAD_support/cb2mUseModules.bash
MITgcm-checkpoint68i/tools/OAD_support/dontCompile
MITgcm-checkpoint68i/tools/OAD_support/dontTransform
MITgcm-checkpoint68i/tools/OAD_support/fixData.sed
MITgcm-checkpoint68i/tools/OAD_support/iaddr.c
MITgcm-checkpoint68i/tools/OAD_support/insertTemplateDir.bash
MITgcm-checkpoint68i/tools/OAD_support/keepOriginal
MITgcm-checkpoint68i/tools/OAD_support/revolve.F90
MITgcm-checkpoint68i/tools/OAD_support/stop2print.sed
MITgcm-checkpoint68i/tools/OAD_support/strip.sed
MITgcm-checkpoint68i/tools/OAD_support/timeRatio.c
MITgcm-checkpoint68i/tools/OAD_support/w2f__types.F90
MITgcm-checkpoint68i/tools/ad_taf_output.f.adtrick.diff
MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_del1
MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_full
MITgcm-checkpoint68i/tools/ad_taf_output.f.onlyfwd.diff
MITgcm-checkpoint68i/tools/adjoint_options/
MITgcm-checkpoint68i/tools/adjoint_options/MITgcm-c64l-TAFv2.patch
MITgcm-checkpoint68i/tools/adjoint_options/README.patch
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_default
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_diva
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_f95
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_oad
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_state_final
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_tamc_compatibility
MITgcm-checkpoint68i/tools/adjoint_sed
MITgcm-checkpoint68i/tools/as
MITgcm-checkpoint68i/tools/build_options/
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-6_f90+mpi_caspur
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-6_sx90_dkrz
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-ACE_sxf90_awi
MITgcm-checkpoint68i/tools/build_options/cygwin_ia32_g77
MITgcm-checkpoint68i/tools/build_options/darwin_absoft_f77
MITgcm-checkpoint68i/tools/build_options/darwin_amd64_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_arm64_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_g95
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_gfortran
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MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/code/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/code/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/code/apply_forcing.F
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/code/packages.conf
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/data
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/data.diagnostics
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/data.pkg
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/data.shap
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/eedata
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/eedata.mth
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/grid_cs32.face001.bin
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/grid_cs32.face002.bin
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/grid_cs32.face003.bin
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/grid_cs32.face004.bin
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/grid_cs32.face005.bin
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/grid_cs32.face006.bin
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/pickup.0000276480
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/input/pickup.0000276480.meta
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/results/
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/run/
MITgcm-checkpoint68i/verification/tutorial_held_suarez_cs/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/README
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/build/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/OBCS_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/code/packages.conf
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/Qnet.forcing
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/T.init
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/data
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/data.obcs
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/data.pkg
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/dx.bin
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/eedata
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/eedata.mth
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/gendata.m
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/input/topog.slope
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/results/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/run/
MITgcm-checkpoint68i/verification/tutorial_plume_on_slope/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/README.md
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/cmap_bluetored.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/matlab_plots.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/analysis/py_notebook.ipynb
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/build/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/LAYERS_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/SIZE.h_eddy
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/code/packages.conf
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/SST_relax.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/T_relax_mask.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/bathy.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.diagnostics
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.gmredi
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.layers
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.pkg
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/data.rbcs
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/eedata
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/eedata.mth
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.50km.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.50km.py
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.5km.m
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/gendata.5km.py
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/temperature.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/input/zonal_wind.50km.bin
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/results/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/run/
MITgcm-checkpoint68i/verification/tutorial_reentrant_channel/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/build/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/apply_forcing.F
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/code/packages.conf
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/bathyPolR.bin
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data.mnc
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/data.pkg
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/eedata
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/eedata.mth
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/reduce_size.m
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/input/thetaPolR.bin
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/results/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/results/output.txt
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/run/
MITgcm-checkpoint68i/verification/tutorial_rotating_tank/run/.gitignore
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/DESCRIPTION
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/README
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/build/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/build/.gitignore
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/AUTODIFF_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/COST_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/CTRL_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/CTRL_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/GAD_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/MDSIO_BUFF_WH.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/packages.conf
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/ptracers_forcing_surf.F
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_ad/tamc.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/AUTODIFF_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/COST_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/CTRL_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/CTRL_SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/GAD_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/OPENAD_OPTIONS.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/SIZE.h
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/SIZE.h_mpi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/cb2mFiles
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/ctrl_map_ini_genarr.F
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/packages.conf
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/code_oad/ptracers_forcing_surf.F
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad.som81/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad.som81/data
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.autodiff
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.cost
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.ctrl
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.gmredi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.grdchk
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.optim
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.pkg
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/data.ptracers
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/eedata
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_ad/prepare_run
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.autodiff
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.cost
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.ctrl
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.gmredi
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.grdchk
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.optim
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.pkg
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/data.ptracers
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/eedata
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/ncheckLev.conf
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/input_oad/prepare_run
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_adm.som81.txt
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_adm.txt
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_oadm.txt
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_tlm.som81.txt.gz
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/results/output_tlm.txt.gz
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/
MITgcm-checkpoint68i/verification/tutorial_tracer_adjsens/run/.gitignore
MITgcm-checkpoint68i/verification/verification_parser.py
MITgcm-checkpoint68i/verification/vermix/
MITgcm-checkpoint68i/verification/vermix/build/
MITgcm-checkpoint68i/verification/vermix/build/.gitignore
MITgcm-checkpoint68i/verification/vermix/code/
MITgcm-checkpoint68i/verification/vermix/code/CPP_EEOPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/CPP_OPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/verification/vermix/code/KPP_OPTIONS.h
MITgcm-checkpoint68i/verification/vermix/code/SIZE.h
MITgcm-checkpoint68i/verification/vermix/code/packages.conf
MITgcm-checkpoint68i/verification/vermix/input.dd/
MITgcm-checkpoint68i/verification/vermix/input.dd/data
MITgcm-checkpoint68i/verification/vermix/input.dd/data.kpp
MITgcm-checkpoint68i/verification/vermix/input.ggl90/
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.ggl90
MITgcm-checkpoint68i/verification/vermix/input.ggl90/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.my82/
MITgcm-checkpoint68i/verification/vermix/input.my82/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.my82/data.my82
MITgcm-checkpoint68i/verification/vermix/input.my82/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.opps/
MITgcm-checkpoint68i/verification/vermix/input.opps/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.opps/data.opps
MITgcm-checkpoint68i/verification/vermix/input.opps/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.pp81/
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pkg
MITgcm-checkpoint68i/verification/vermix/input.pp81/data.pp81
MITgcm-checkpoint68i/verification/vermix/input/
MITgcm-checkpoint68i/verification/vermix/input/Qnet_72.forcing
MITgcm-checkpoint68i/verification/vermix/input/S.doublediff
MITgcm-checkpoint68i/verification/vermix/input/S.init
MITgcm-checkpoint68i/verification/vermix/input/T.doublediff
MITgcm-checkpoint68i/verification/vermix/input/TKE.init
MITgcm-checkpoint68i/verification/vermix/input/T_26.init
MITgcm-checkpoint68i/verification/vermix/input/data
MITgcm-checkpoint68i/verification/vermix/input/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input/data.kpp
MITgcm-checkpoint68i/verification/vermix/input/data.mnc
MITgcm-checkpoint68i/verification/vermix/input/data.pkg
MITgcm-checkpoint68i/verification/vermix/input/eedata
MITgcm-checkpoint68i/verification/vermix/input/gendata.m
MITgcm-checkpoint68i/verification/vermix/input/taux_72.forcing
MITgcm-checkpoint68i/verification/vermix/input/tr_checklist
MITgcm-checkpoint68i/verification/vermix/results/
MITgcm-checkpoint68i/verification/vermix/results/output.dd.txt
MITgcm-checkpoint68i/verification/vermix/results/output.ggl90.txt
MITgcm-checkpoint68i/verification/vermix/results/output.my82.txt
MITgcm-checkpoint68i/verification/vermix/results/output.opps.txt
MITgcm-checkpoint68i/verification/vermix/results/output.pp81.txt
MITgcm-checkpoint68i/verification/vermix/results/output.txt
MITgcm-checkpoint68i/verification/vermix/run/
MITgcm-checkpoint68i/verification/vermix/run/.gitignore

[41;37m   step #5: BuildMITgcm   [0m


GENMAKE :

A program for GENerating MAKEfiles for the MITgcm project.
   For a quick list of options, use "genmake2 -h"
or for more detail see the documentation, section "Building the model"
   (under "Getting Started") at:  <a href='https://mitgcm.readthedocs.io/'>https://mitgcm.readthedocs.io/</a>

===  Processing options files and arguments  ===
  getting local config information:  none found
  getting OPTFILE information:
Warning: no OPTFILE specified so we'll look for possible settings

===  Searching for possible settings for OPTFILE  ===
  The platform appears to be:  linux_amd64
  The possible FORTRAN compilers found in your path are:  gfortran f77 f95 mpif77
  Setting OPTFILE to: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran
    using OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran"
    get Compiler-version: '12'
  getting AD_OPTFILE information:
    using AD_OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/adjoint_options/adjoint_default"
  check Fortran Compiler...  pass  (set FC_CHECK=5/5)
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/genmake2: line 1886: echo: write error: Broken pipe
  check makedepend (local: 0, system: 1, 1)
  Turning on MPI cpp macros

===  Checking system libraries  ===
  Do we have the system() command using mpif77...  yes
  Do we have the fdate() command using mpif77...  yes
  Do we have the etime() command using mpif77... c,r: yes (SbR)
  Can we call simple C routines (here, "cloc()") using mpif77...  yes
  Can we unlimit the stack size using mpif77...  yes
  Can we register a signal handler using mpif77...  yes
  Can we use stat() through C calls...  yes
  Can we create NetCDF-enabled binaries...  no
    skip check for LAPACK Libs
  Can we call FLUSH intrinsic subroutine...  yes

===  Setting defaults  ===
  Adding MODS directories: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code 
  Making source files in eesupp from templates
  Making source files in pkg/exch2 from templates
  Making source files in pkg/regrid from templates

===  Determining package settings  ===
  getting package dependency info from  /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_depend
  getting package groups info from      /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_groups
  checking list of packages to compile:
    using PKG_LIST="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/packages.conf"
    before group expansion packages are: gfd obcs shelfice diagnostics timeave
    replacing "gfd" with:  mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor
    after group expansion packages are:  mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor obcs shelfice diagnostics timeave
  applying DISABLE settings
  applying ENABLE settings
    packages are:  debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave
  applying package dependency rules
    packages are:  debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave
  Adding STANDARDDIRS='eesupp model'
  Searching for *OPTIONS.h files in order to warn about the presence
    of "#define "-type statements that are no longer allowed:
    found CPP_EEOPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h"
    found CPP_OPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h"
  Creating the list of files for the adjoint compiler.

===  Creating the Makefile  ===
  setting INCLUDES
  Determining the list of source and include files
  Writing makefile: Makefile
  Add the source list for AD code generation
  Making list of "exceptions" that need ".p" files
  Making list of NOOPTFILES
  Add rules for links
  Adding makedepend marker

===  Done  ===
  original 'Makefile' generated successfully
=&gt; next steps:
  &gt; make depend
  &gt; make       (&lt;-- to generate executable)
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build'
if [ ! -L cpl_issm.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/cpl_issm.F cpl_issm.F; fi
if [ ! -L do_oceanic_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/do_oceanic_phys.F do_oceanic_phys.F; fi
if [ ! -L eeboot_minimal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eeboot_minimal.F eeboot_minimal.F; fi
if [ ! -L eedie.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eedie.F eedie.F; fi
if [ ! -L chksum_tiled.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/chksum_tiled.F chksum_tiled.F; fi
if [ ! -L debug_call.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_call.F debug_call.F; fi
if [ ! -L debug_cs_corner_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_cs_corner_uv.F debug_cs_corner_uv.F; fi
if [ ! -L debug_enter.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_enter.F debug_enter.F; fi
if [ ! -L debug_fld_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rl.F debug_fld_stats_rl.F; fi
if [ ! -L debug_fld_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rs.F debug_fld_stats_rs.F; fi
if [ ! -L debug_leave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_leave.F debug_leave.F; fi
if [ ! -L debug_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_msg.F debug_msg.F; fi
if [ ! -L debug_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rl.F debug_stats_rl.F; fi
if [ ! -L debug_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rs.F debug_stats_rs.F; fi
if [ ! -L fill_in_corners_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/fill_in_corners_rl.F fill_in_corners_rl.F; fi
if [ ! -L write_fullarray_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rl.F write_fullarray_rl.F; fi
if [ ! -L write_fullarray_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rs.F write_fullarray_rs.F; fi
if [ ! -L diag_calc_psivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_calc_psivel.F diag_calc_psivel.F; fi
if [ ! -L diag_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_cg2d.F diag_cg2d.F; fi
if [ ! -L diagnostics_addtolist.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_addtolist.F diagnostics_addtolist.F; fi
if [ ! -L diagnostics_calc_phivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_calc_phivel.F diagnostics_calc_phivel.F; fi
if [ ! -L diagnostics_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_check.F diagnostics_check.F; fi
if [ ! -L diagnostics_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_clear.F diagnostics_clear.F; fi
if [ ! -L diagnostics_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill.F diagnostics_fill.F; fi
if [ ! -L diagnostics_fill_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_field.F diagnostics_fill_field.F; fi
if [ ! -L diagnostics_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_rs.F diagnostics_fill_rs.F; fi
if [ ! -L diagnostics_fill_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_state.F diagnostics_fill_state.F; fi
if [ ! -L diagnostics_fract_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fract_fill.F diagnostics_fract_fill.F; fi
if [ ! -L diagnostics_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_ini_io.F diagnostics_ini_io.F; fi
if [ ! -L diagnostics_init_early.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_early.F diagnostics_init_early.F; fi
if [ ! -L diagnostics_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_fixed.F diagnostics_init_fixed.F; fi
if [ ! -L diagnostics_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_varia.F diagnostics_init_varia.F; fi
if [ ! -L diagnostics_interp_p2p.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_p2p.F diagnostics_interp_p2p.F; fi
if [ ! -L diagnostics_interp_vert.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_vert.F diagnostics_interp_vert.F; fi
if [ ! -L diagnostics_is_on.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_is_on.F diagnostics_is_on.F; fi
if [ ! -L diagnostics_list_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_list_check.F diagnostics_list_check.F; fi
if [ ! -L diagnostics_main_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_main_init.F diagnostics_main_init.F; fi
if [ ! -L diagnostics_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_mnc_out.F diagnostics_mnc_out.F; fi
if [ ! -L diagnostics_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_out.F diagnostics_out.F; fi
if [ ! -L diagnostics_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_readparms.F diagnostics_readparms.F; fi
if [ ! -L diagnostics_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_read_pickup.F diagnostics_read_pickup.F; fi
if [ ! -L diagnostics_scale_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill.F diagnostics_scale_fill.F; fi
if [ ! -L diagnostics_scale_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill_rs.F diagnostics_scale_fill_rs.F; fi
if [ ! -L diagnostics_set_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_calc.F diagnostics_set_calc.F; fi
if [ ! -L diagnostics_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_setdiag.F diagnostics_setdiag.F; fi
if [ ! -L diagnostics_set_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_levels.F diagnostics_set_levels.F; fi
if [ ! -L diagnostics_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_pointers.F diagnostics_set_pointers.F; fi
if [ ! -L diagnostics_status_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_status_error.F diagnostics_status_error.F; fi
if [ ! -L diagnostics_sum_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_sum_levels.F diagnostics_sum_levels.F; fi
if [ ! -L diagnostics_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_summary.F diagnostics_summary.F; fi
if [ ! -L diagnostics_switch_onoff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_switch_onoff.F diagnostics_switch_onoff.F; fi
if [ ! -L diagnostics_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_utils.F diagnostics_utils.F; fi
if [ ! -L diagnostics_write_adj.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_adj.F diagnostics_write_adj.F; fi
if [ ! -L diagnostics_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write.F diagnostics_write.F; fi
if [ ! -L diagnostics_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_pickup.F diagnostics_write_pickup.F; fi
if [ ! -L diagstats_ascii_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ascii_out.F diagstats_ascii_out.F; fi
if [ ! -L diagstats_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_calc.F diagstats_calc.F; fi
if [ ! -L diagstats_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_clear.F diagstats_clear.F; fi
if [ ! -L diagstats_close_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_close_io.F diagstats_close_io.F; fi
if [ ! -L diagstats_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_fill.F diagstats_fill.F; fi
if [ ! -L diagstats_global.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_global.F diagstats_global.F; fi
if [ ! -L diagstats_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ini_io.F diagstats_ini_io.F; fi
if [ ! -L diagstats_local.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_local.F diagstats_local.F; fi
if [ ! -L diagstats_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_mnc_out.F diagstats_mnc_out.F; fi
if [ ! -L diagstats_others_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_others_calc.F diagstats_others_calc.F; fi
if [ ! -L diagstats_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_output.F diagstats_output.F; fi
if [ ! -L diagstats_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_setdiag.F diagstats_setdiag.F; fi
if [ ! -L diagstats_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_pointers.F diagstats_set_pointers.F; fi
if [ ! -L diagstats_set_regions.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_regions.F diagstats_set_regions.F; fi
if [ ! -L diag_vegtile_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_vegtile_fill.F diag_vegtile_fill.F; fi
if [ ! -L gad_advection.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advection.F gad_advection.F; fi
if [ ! -L gad_advscheme.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advscheme.F gad_advscheme.F; fi
if [ ! -L gad_biharm_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_r.F gad_biharm_r.F; fi
if [ ! -L gad_biharm_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_x.F gad_biharm_x.F; fi
if [ ! -L gad_biharm_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_y.F gad_biharm_y.F; fi
if [ ! -L gad_c2_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_r.F gad_c2_adv_r.F; fi
if [ ! -L gad_c2_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_x.F gad_c2_adv_x.F; fi
if [ ! -L gad_c2_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_y.F gad_c2_adv_y.F; fi
if [ ! -L gad_c2_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_impl_r.F gad_c2_impl_r.F; fi
if [ ! -L gad_c4_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_r.F gad_c4_adv_r.F; fi
if [ ! -L gad_c4_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_x.F gad_c4_adv_x.F; fi
if [ ! -L gad_c4_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_y.F gad_c4_adv_y.F; fi
if [ ! -L gad_calc_rhs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_calc_rhs.F gad_calc_rhs.F; fi
if [ ! -L gad_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_check.F gad_check.F; fi
if [ ! -L gad_del2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_del2.F gad_del2.F; fi
if [ ! -L gad_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_init.F gad_diagnostics_init.F; fi
if [ ! -L gad_diagnostics_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_state.F gad_diagnostics_state.F; fi
if [ ! -L gad_diff_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_r.F gad_diff_r.F; fi
if [ ! -L gad_diff_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_x.F gad_diff_x.F; fi
if [ ! -L gad_diff_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_y.F gad_diff_y.F; fi
if [ ! -L gad_dst2u1_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_r.F gad_dst2u1_adv_r.F; fi
if [ ! -L gad_dst2u1_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_x.F gad_dst2u1_adv_x.F; fi
if [ ! -L gad_dst2u1_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_y.F gad_dst2u1_adv_y.F; fi
if [ ! -L gad_dst2u1_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_impl_r.F gad_dst2u1_impl_r.F; fi
if [ ! -L gad_dst3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_r.F gad_dst3_adv_r.F; fi
if [ ! -L gad_dst3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_x.F gad_dst3_adv_x.F; fi
if [ ! -L gad_dst3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_y.F gad_dst3_adv_y.F; fi
if [ ! -L gad_dst3fl_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_r.F gad_dst3fl_adv_r.F; fi
if [ ! -L gad_dst3fl_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_x.F gad_dst3fl_adv_x.F; fi
if [ ! -L gad_dst3fl_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_y.F gad_dst3fl_adv_y.F; fi
if [ ! -L gad_dst3fl_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_impl_r.F gad_dst3fl_impl_r.F; fi
if [ ! -L gad_exch_som.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_exch_som.F gad_exch_som.F; fi
if [ ! -L gad_fluxlimit_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_r.F gad_fluxlimit_adv_r.F; fi
if [ ! -L gad_fluxlimit_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_x.F gad_fluxlimit_adv_x.F; fi
if [ ! -L gad_fluxlimit_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_y.F gad_fluxlimit_adv_y.F; fi
if [ ! -L gad_fluxlimit_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_impl_r.F gad_fluxlimit_impl_r.F; fi
if [ ! -L gad_grad_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_x.F gad_grad_x.F; fi
if [ ! -L gad_grad_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_y.F gad_grad_y.F; fi
if [ ! -L gad_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_implicit_r.F gad_implicit_r.F; fi
if [ ! -L gad_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_fixed.F gad_init_fixed.F; fi
if [ ! -L gad_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_varia.F gad_init_varia.F; fi
if [ ! -L gad_os7mp_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_r.F gad_os7mp_adv_r.F; fi
if [ ! -L gad_os7mp_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_x.F gad_os7mp_adv_x.F; fi
if [ ! -L gad_os7mp_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_y.F gad_os7mp_adv_y.F; fi
if [ ! -L gad_osc_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_r.F gad_osc_hat_r.F; fi
if [ ! -L gad_osc_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_x.F gad_osc_hat_x.F; fi
if [ ! -L gad_osc_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_y.F gad_osc_hat_y.F; fi
if [ ! -L gad_osc_mul_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_r.F gad_osc_mul_r.F; fi
if [ ! -L gad_osc_mul_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_x.F gad_osc_mul_x.F; fi
if [ ! -L gad_osc_mul_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_y.F gad_osc_mul_y.F; fi
if [ ! -L gad_plm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_plm_fun.F gad_plm_fun.F; fi
if [ ! -L gad_ppm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_r.F gad_ppm_adv_r.F; fi
if [ ! -L gad_ppm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_x.F gad_ppm_adv_x.F; fi
if [ ! -L gad_ppm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_y.F gad_ppm_adv_y.F; fi
if [ ! -L gad_ppm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_r.F gad_ppm_flx_r.F; fi
if [ ! -L gad_ppm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_x.F gad_ppm_flx_x.F; fi
if [ ! -L gad_ppm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_y.F gad_ppm_flx_y.F; fi
if [ ! -L gad_ppm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_fun.F gad_ppm_fun.F; fi
if [ ! -L gad_ppm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_r.F gad_ppm_hat_r.F; fi
if [ ! -L gad_ppm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_x.F gad_ppm_hat_x.F; fi
if [ ! -L gad_ppm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_y.F gad_ppm_hat_y.F; fi
if [ ! -L gad_ppm_p3e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_r.F gad_ppm_p3e_r.F; fi
if [ ! -L gad_ppm_p3e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_x.F gad_ppm_p3e_x.F; fi
if [ ! -L gad_ppm_p3e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_y.F gad_ppm_p3e_y.F; fi
if [ ! -L gad_pqm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_r.F gad_pqm_adv_r.F; fi
if [ ! -L gad_pqm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_x.F gad_pqm_adv_x.F; fi
if [ ! -L gad_pqm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_y.F gad_pqm_adv_y.F; fi
if [ ! -L gad_pqm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_r.F gad_pqm_flx_r.F; fi
if [ ! -L gad_pqm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_x.F gad_pqm_flx_x.F; fi
if [ ! -L gad_pqm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_y.F gad_pqm_flx_y.F; fi
if [ ! -L gad_pqm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_fun.F gad_pqm_fun.F; fi
if [ ! -L gad_pqm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_r.F gad_pqm_hat_r.F; fi
if [ ! -L gad_pqm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_x.F gad_pqm_hat_x.F; fi
if [ ! -L gad_pqm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_y.F gad_pqm_hat_y.F; fi
if [ ! -L gad_pqm_p5e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_r.F gad_pqm_p5e_r.F; fi
if [ ! -L gad_pqm_p5e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_x.F gad_pqm_p5e_x.F; fi
if [ ! -L gad_pqm_p5e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_y.F gad_pqm_p5e_y.F; fi
if [ ! -L gad_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_read_pickup.F gad_read_pickup.F; fi
if [ ! -L gad_som_advect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_advect.F gad_som_advect.F; fi
if [ ! -L gad_som_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_r.F gad_som_adv_r.F; fi
if [ ! -L gad_som_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_x.F gad_som_adv_x.F; fi
if [ ! -L gad_som_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_y.F gad_som_adv_y.F; fi
if [ ! -L gad_som_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_exchanges.F gad_som_exchanges.F; fi
if [ ! -L gad_som_fill_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_fill_cs_corner.F gad_som_fill_cs_corner.F; fi
if [ ! -L gad_som_lim_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_lim_r.F gad_som_lim_r.F; fi
if [ ! -L gad_som_prep_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_prep_cs_corner.F gad_som_prep_cs_corner.F; fi
if [ ! -L gad_u3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_r.F gad_u3_adv_r.F; fi
if [ ! -L gad_u3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_x.F gad_u3_adv_x.F; fi
if [ ! -L gad_u3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_y.F gad_u3_adv_y.F; fi
if [ ! -L gad_u3c4_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3c4_impl_r.F gad_u3c4_impl_r.F; fi
if [ ! -L gad_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_write_pickup.F gad_write_pickup.F; fi
if [ ! -L salt_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/salt_fill.F salt_fill.F; fi
if [ ! -L mdsio_buffertorl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertorl.F mdsio_buffertorl.F; fi
if [ ! -L mdsio_buffertors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertors.F mdsio_buffertors.F; fi
if [ ! -L mdsio_check4file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_check4file.F mdsio_check4file.F; fi
if [ ! -L mdsio_facef_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_facef_read.F mdsio_facef_read.F; fi
if [ ! -L mdsio_gl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl.F mdsio_gl.F; fi
if [ ! -L mdsio_gl_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl_slice.F mdsio_gl_slice.F; fi
if [ ! -L mdsio_pass_r4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4torl.F mdsio_pass_r4torl.F; fi
if [ ! -L mdsio_pass_r4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4tors.F mdsio_pass_r4tors.F; fi
if [ ! -L mdsio_pass_r8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8torl.F mdsio_pass_r8torl.F; fi
if [ ! -L mdsio_pass_r8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8tors.F mdsio_pass_r8tors.F; fi
if [ ! -L mdsio_rd_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rl.F mdsio_rd_rec_rl.F; fi
if [ ! -L mdsio_rd_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rs.F mdsio_rd_rec_rs.F; fi
if [ ! -L mdsio_read_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_field.F mdsio_read_field.F; fi
if [ ! -L mdsio_read_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_meta.F mdsio_read_meta.F; fi
if [ ! -L mdsio_read_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_section.F mdsio_read_section.F; fi
if [ ! -L mdsio_read_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_tape.F mdsio_read_tape.F; fi
if [ ! -L mdsio_readvec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_readvec_loc.F mdsio_readvec_loc.F; fi
if [ ! -L mdsio_read_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_whalos.F mdsio_read_whalos.F; fi
if [ ! -L mdsio_rw_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_field.F mdsio_rw_field.F; fi
if [ ! -L mdsio_rw_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_slice.F mdsio_rw_slice.F; fi
if [ ! -L mdsio_seg4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4torl.F mdsio_seg4torl.F; fi
if [ ! -L mdsio_seg4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4tors.F mdsio_seg4tors.F; fi
if [ ! -L mdsio_seg8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8torl.F mdsio_seg8torl.F; fi
if [ ! -L mdsio_seg8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8tors.F mdsio_seg8tors.F; fi
if [ ! -L mdsio_segxtorx_2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_segxtorx_2d.F mdsio_segxtorx_2d.F; fi
if [ ! -L mdsio_write_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_field.F mdsio_write_field.F; fi
if [ ! -L mdsio_writelocal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writelocal.F mdsio_writelocal.F; fi
if [ ! -L mdsio_write_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_meta.F mdsio_write_meta.F; fi
if [ ! -L mdsio_write_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_section.F mdsio_write_section.F; fi
if [ ! -L mdsio_write_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_tape.F mdsio_write_tape.F; fi
if [ ! -L mdsio_writevec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writevec_loc.F mdsio_writevec_loc.F; fi
if [ ! -L mdsio_write_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_whalos.F mdsio_write_whalos.F; fi
if [ ! -L mdsio_wr_metafiles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_metafiles.F mdsio_wr_metafiles.F; fi
if [ ! -L mdsio_wr_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rl.F mdsio_wr_rec_rl.F; fi
if [ ! -L mdsio_wr_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rs.F mdsio_wr_rec_rs.F; fi
if [ ! -L mom_calc_3d_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_3d_strain.F mom_calc_3d_strain.F; fi
if [ ! -L mom_calc_absvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_absvort3.F mom_calc_absvort3.F; fi
if [ ! -L mom_calc_hdiv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hdiv.F mom_calc_hdiv.F; fi
if [ ! -L mom_calc_hfacz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hfacz.F mom_calc_hfacz.F; fi
if [ ! -L mom_calc_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_ke.F mom_calc_ke.F; fi
if [ ! -L mom_calc_relvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_relvort3.F mom_calc_relvort3.F; fi
if [ ! -L mom_calc_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_smag_3d.F mom_calc_smag_3d.F; fi
if [ ! -L mom_calc_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_strain.F mom_calc_strain.F; fi
if [ ! -L mom_calc_tension.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_tension.F mom_calc_tension.F; fi
if [ ! -L mom_calc_visc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_visc.F mom_calc_visc.F; fi
if [ ! -L mom_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_diagnostics_init.F mom_diagnostics_init.F; fi
if [ ! -L mom_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_hdissip.F mom_hdissip.F; fi
if [ ! -L mom_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_init_fixed.F mom_init_fixed.F; fi
if [ ! -L mom_quasihydrostatic.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_quasihydrostatic.F mom_quasihydrostatic.F; fi
if [ ! -L mom_u_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_botdrag_coeff.F mom_u_botdrag_coeff.F; fi
if [ ! -L mom_u_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_coriolis_nh.F mom_u_coriolis_nh.F; fi
if [ ! -L mom_u_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_implicit_r.F mom_u_implicit_r.F; fi
if [ ! -L mom_u_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_metric_nh.F mom_u_metric_nh.F; fi
if [ ! -L mom_u_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_rviscflux.F mom_u_rviscflux.F; fi
if [ ! -L mom_u_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_sidedrag.F mom_u_sidedrag.F; fi
if [ ! -L mom_uv_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_uv_smag_3d.F mom_uv_smag_3d.F; fi
if [ ! -L mom_v_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_botdrag_coeff.F mom_v_botdrag_coeff.F; fi
if [ ! -L mom_v_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_coriolis_nh.F mom_v_coriolis_nh.F; fi
if [ ! -L mom_v_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_implicit_r.F mom_v_implicit_r.F; fi
if [ ! -L mom_visc_qgl_limit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_limit.F mom_visc_qgl_limit.F; fi
if [ ! -L mom_visc_qgl_stretch.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_stretch.F mom_visc_qgl_stretch.F; fi
if [ ! -L mom_v_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_metric_nh.F mom_v_metric_nh.F; fi
if [ ! -L mom_v_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_rviscflux.F mom_v_rviscflux.F; fi
if [ ! -L mom_v_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_sidedrag.F mom_v_sidedrag.F; fi
if [ ! -L mom_w_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_coriolis_nh.F mom_w_coriolis_nh.F; fi
if [ ! -L mom_w_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_metric_nh.F mom_w_metric_nh.F; fi
if [ ! -L mom_w_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_sidedrag.F mom_w_sidedrag.F; fi
if [ ! -L mom_w_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_smag_3d.F mom_w_smag_3d.F; fi
if [ ! -L mom_calc_rtrans.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_calc_rtrans.F mom_calc_rtrans.F; fi
if [ ! -L mom_fluxform.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_fluxform.F mom_fluxform.F; fi
if [ ! -L mom_u_adv_uu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_uu.F mom_u_adv_uu.F; fi
if [ ! -L mom_u_adv_vu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_vu.F mom_u_adv_vu.F; fi
if [ ! -L mom_u_adv_wu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_wu.F mom_u_adv_wu.F; fi
if [ ! -L mom_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_coriolis.F mom_u_coriolis.F; fi
if [ ! -L mom_u_del2u.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_del2u.F mom_u_del2u.F; fi
if [ ! -L mom_u_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_cylinder.F mom_u_metric_cylinder.F; fi
if [ ! -L mom_u_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_sphere.F mom_u_metric_sphere.F; fi
if [ ! -L mom_uv_boundary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_uv_boundary.F mom_uv_boundary.F; fi
if [ ! -L mom_u_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_xviscflux.F mom_u_xviscflux.F; fi
if [ ! -L mom_u_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_yviscflux.F mom_u_yviscflux.F; fi
if [ ! -L mom_v_adv_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_uv.F mom_v_adv_uv.F; fi
if [ ! -L mom_v_adv_vv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_vv.F mom_v_adv_vv.F; fi
if [ ! -L mom_v_adv_wv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_wv.F mom_v_adv_wv.F; fi
if [ ! -L mom_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_coriolis.F mom_v_coriolis.F; fi
if [ ! -L mom_v_del2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_del2v.F mom_v_del2v.F; fi
if [ ! -L mom_v_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_cylinder.F mom_v_metric_cylinder.F; fi
if [ ! -L mom_v_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_sphere.F mom_v_metric_sphere.F; fi
if [ ! -L mom_v_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_xviscflux.F mom_v_xviscflux.F; fi
if [ ! -L mom_v_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_yviscflux.F mom_v_yviscflux.F; fi
if [ ! -L mom_vecinv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vecinv.F mom_vecinv.F; fi
if [ ! -L mom_vi_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_coriolis.F mom_vi_coriolis.F; fi
if [ ! -L mom_vi_del2uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_del2uv.F mom_vi_del2uv.F; fi
if [ ! -L mom_vi_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_hdissip.F mom_vi_hdissip.F; fi
if [ ! -L mom_vi_u_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F mom_vi_u_coriolis_c4.F; fi
if [ ! -L mom_vi_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis.F mom_vi_u_coriolis.F; fi
if [ ! -L mom_vi_u_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_grad_ke.F mom_vi_u_grad_ke.F; fi
if [ ! -L mom_vi_u_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_vertshear.F mom_vi_u_vertshear.F; fi
if [ ! -L mom_vi_v_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F mom_vi_v_coriolis_c4.F; fi
if [ ! -L mom_vi_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis.F mom_vi_v_coriolis.F; fi
if [ ! -L mom_vi_v_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_grad_ke.F mom_vi_v_grad_ke.F; fi
if [ ! -L mom_vi_v_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_vertshear.F mom_vi_v_vertshear.F; fi
if [ ! -L mon_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcfl.F mon_advcfl.F; fi
if [ ! -L mon_advcflw2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw2.F mon_advcflw2.F; fi
if [ ! -L mon_advcflw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw.F mon_advcflw.F; fi
if [ ! -L mon_calc_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_advcfl.F mon_calc_advcfl.F; fi
if [ ! -L mon_calc_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rl.F mon_calc_stats_rl.F; fi
if [ ! -L mon_calc_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rs.F mon_calc_stats_rs.F; fi
if [ ! -L mon_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_init.F mon_init.F; fi
if [ ! -L monitor_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_ad.F monitor_ad.F; fi
if [ ! -L monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor.F monitor.F; fi
if [ ! -L monitor_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_g.F monitor_g.F; fi
if [ ! -L mon_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_ke.F mon_ke.F; fi
if [ ! -L mon_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_out.F mon_out.F; fi
if [ ! -L mon_printstats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rl.F mon_printstats_rl.F; fi
if [ ! -L mon_printstats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rs.F mon_printstats_rs.F; fi
if [ ! -L mon_set_iounit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_iounit.F mon_set_iounit.F; fi
if [ ! -L mon_set_pref.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_pref.F mon_set_pref.F; fi
if [ ! -L mon_solution.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_solution.F mon_solution.F; fi
if [ ! -L mon_stats_latbnd_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_latbnd_rl.F mon_stats_latbnd_rl.F; fi
if [ ! -L mon_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rl.F mon_stats_rl.F; fi
if [ ! -L mon_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rs.F mon_stats_rs.F; fi
if [ ! -L mon_surfcor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_surfcor.F mon_surfcor.F; fi
if [ ! -L mon_vort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_vort3.F mon_vort3.F; fi
if [ ! -L mon_writestats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rl.F mon_writestats_rl.F; fi
if [ ! -L mon_writestats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rs.F mon_writestats_rs.F; fi
if [ ! -L obcs_add_tides.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_add_tides.F obcs_add_tides.F; fi
if [ ! -L obcs_adjust.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust.F obcs_adjust.F; fi
if [ ! -L obcs_adjust_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust_uvice.F obcs_adjust_uvice.F; fi
if [ ! -L obcs_apply_eta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_eta.F obcs_apply_eta.F; fi
if [ ! -L obcs_apply_ptracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ptracer.F obcs_apply_ptracer.F; fi
if [ ! -L obcs_apply_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_r_star.F obcs_apply_r_star.F; fi
if [ ! -L obcs_apply_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_seaice.F obcs_apply_seaice.F; fi
if [ ! -L obcs_apply_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_surf_dr.F obcs_apply_surf_dr.F; fi
if [ ! -L obcs_apply_ts.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ts.F obcs_apply_ts.F; fi
if [ ! -L obcs_apply_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uv.F obcs_apply_uv.F; fi
if [ ! -L obcs_apply_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uvice.F obcs_apply_uvice.F; fi
if [ ! -L obcs_apply_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_w.F obcs_apply_w.F; fi
if [ ! -L obcs_balance_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_balance_flow.F obcs_balance_flow.F; fi
if [ ! -L obcs_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc.F obcs_calc.F; fi
if [ ! -L obcs_calc_stevens.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc_stevens.F obcs_calc_stevens.F; fi
if [ ! -L obcs_check_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check_depths.F obcs_check_depths.F; fi
if [ ! -L obcs_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check.F obcs_check.F; fi
if [ ! -L obcs_copy_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_tracer.F obcs_copy_tracer.F; fi
if [ ! -L obcs_copy_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_uv_n.F obcs_copy_uv_n.F; fi
if [ ! -L obcs_diag_balance.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_diag_balance.F obcs_diag_balance.F; fi
if [ ! -L obcs_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exchanges.F obcs_exchanges.F; fi
if [ ! -L obcs_exf_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exf_load.F obcs_exf_load.F; fi
if [ ! -L obcs_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_fields_load.F obcs_fields_load.F; fi
if [ ! -L obcs_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_fixed.F obcs_init_fixed.F; fi
if [ ! -L obcs_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_variables.F obcs_init_variables.F; fi
if [ ! -L obcs_monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_monitor.F obcs_monitor.F; fi
if [ ! -L obcs_mon_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_mon_stats.F obcs_mon_stats.F; fi
if [ ! -L obcs_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_output.F obcs_output.F; fi
if [ ! -L obcs_prescribe_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_prescribe_read.F obcs_prescribe_read.F; fi
if [ ! -L obcs_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_readparms.F obcs_readparms.F; fi
if [ ! -L obcs_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_read_pickup.F obcs_read_pickup.F; fi
if [ ! -L obcs_save_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_save_uv_n.F obcs_save_uv_n.F; fi
if [ ! -L obcs_seaice_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_seaice_sponge.F obcs_seaice_sponge.F; fi
if [ ! -L obcs_set_connect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_set_connect.F obcs_set_connect.F; fi
if [ ! -L obcs_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_sponge.F obcs_sponge.F; fi
if [ ! -L obcs_u1_adv_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_u1_adv_tracer.F obcs_u1_adv_tracer.F; fi
if [ ! -L obcs_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_write_pickup.F obcs_write_pickup.F; fi
if [ ! -L orlanski_east.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_east.F orlanski_east.F; fi
if [ ! -L orlanski_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_init.F orlanski_init.F; fi
if [ ! -L orlanski_north.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_north.F orlanski_north.F; fi
if [ ! -L orlanski_south.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_south.F orlanski_south.F; fi
if [ ! -L orlanski_west.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_west.F orlanski_west.F; fi
if [ ! -L get_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/get_write_global_fld.F get_write_global_fld.F; fi
if [ ! -L read_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rl.F read_fld_xy_rl.F; fi
if [ ! -L read_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rs.F read_fld_xy_rs.F; fi
if [ ! -L read_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rl.F read_fld_xyz_rl.F; fi
if [ ! -L read_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rs.F read_fld_xyz_rs.F; fi
if [ ! -L read_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rl.F read_glvec_rl.F; fi
if [ ! -L read_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rs.F read_glvec_rs.F; fi
if [ ! -L read_mflds.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_mflds.F read_mflds.F; fi
if [ ! -L read_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_rec.F read_rec.F; fi
if [ ! -L rw_get_suffix.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/rw_get_suffix.F rw_get_suffix.F; fi
if [ ! -L set_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/set_write_global_fld.F set_write_global_fld.F; fi
if [ ! -L write_fld_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rl.F write_fld_3d_rl.F; fi
if [ ! -L write_fld_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rs.F write_fld_3d_rs.F; fi
if [ ! -L write_fld_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rl.F write_fld_s3d_rl.F; fi
if [ ! -L write_fld_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rs.F write_fld_s3d_rs.F; fi
if [ ! -L write_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rl.F write_fld_xy_rl.F; fi
if [ ! -L write_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rs.F write_fld_xy_rs.F; fi
if [ ! -L write_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rl.F write_fld_xyz_rl.F; fi
if [ ! -L write_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rs.F write_fld_xyz_rs.F; fi
if [ ! -L write_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rl.F write_glvec_rl.F; fi
if [ ! -L write_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rs.F write_glvec_rs.F; fi
if [ ! -L write_local_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rl.F write_local_rl.F; fi
if [ ! -L write_local_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rs.F write_local_rs.F; fi
if [ ! -L write_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_rec.F write_rec.F; fi
if [ ! -L shelfice_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_check.F shelfice_check.F; fi
if [ ! -L shelfice_cost_accumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_accumulate.F shelfice_cost_accumulate.F; fi
if [ ! -L shelfice_cost_final.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_final.F shelfice_cost_final.F; fi
if [ ! -L shelfice_cost_shifwflx.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_shifwflx.F shelfice_cost_shifwflx.F; fi
if [ ! -L shelfice_diagnostics_drag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_diagnostics_drag.F shelfice_diagnostics_drag.F; fi
if [ ! -L shelfice_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing.F shelfice_forcing.F; fi
if [ ! -L shelfice_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing_surf.F shelfice_forcing_surf.F; fi
if [ ! -L shelfice_init_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_depths.F shelfice_init_depths.F; fi
if [ ! -L shelfice_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_fixed.F shelfice_init_fixed.F; fi
if [ ! -L shelfice_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_varia.F shelfice_init_varia.F; fi
if [ ! -L shelfice_mask_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mask_seaice.F shelfice_mask_seaice.F; fi
if [ ! -L shelfice_mnc_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mnc_init.F shelfice_mnc_init.F; fi
if [ ! -L shelfice_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_output.F shelfice_output.F; fi
if [ ! -L shelfice_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_readparms.F shelfice_readparms.F; fi
if [ ! -L shelfice_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_read_pickup.F shelfice_read_pickup.F; fi
if [ ! -L shelfice_remesh_calc_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_calc_w.F shelfice_remesh_calc_w.F; fi
if [ ! -L shelfice_remesh_c_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_c_mask.F shelfice_remesh_c_mask.F; fi
if [ ! -L shelfice_remeshing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remeshing.F shelfice_remeshing.F; fi
if [ ! -L shelfice_remesh_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_state.F shelfice_remesh_state.F; fi
if [ ! -L shelfice_remesh_uv_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_uv_mask.F shelfice_remesh_uv_mask.F; fi
if [ ! -L shelfice_step_icemass.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_step_icemass.F shelfice_step_icemass.F; fi
if [ ! -L shelfice_thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_thermodynamics.F shelfice_thermodynamics.F; fi
if [ ! -L shelfice_u_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_u_drag_coeff.F shelfice_u_drag_coeff.F; fi
if [ ! -L shelfice_v_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_v_drag_coeff.F shelfice_v_drag_coeff.F; fi
if [ ! -L shelfice_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_write_pickup.F shelfice_write_pickup.F; fi
if [ ! -L timeave_cumul_1k1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1k1t.F timeave_cumul_1k1t.F; fi
if [ ! -L timeave_cumul_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1t.F timeave_cumul_1t.F; fi
if [ ! -L timeave_cumul_1vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1vfc.F timeave_cumul_1vfc.F; fi
if [ ! -L timeave_cumul_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2v.F timeave_cumul_2v.F; fi
if [ ! -L timeave_cumul_2vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2vfc.F timeave_cumul_2vfc.F; fi
if [ ! -L timeave_cumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumulate.F timeave_cumulate.F; fi
if [ ! -L timeave_cumul_dif_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_dif_1t.F timeave_cumul_dif_1t.F; fi
if [ ! -L timeave_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_init_fixed.F timeave_init_fixed.F; fi
if [ ! -L timeave_norma_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_norma_2v.F timeave_norma_2v.F; fi
if [ ! -L timeave_normalize.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_normalize.F timeave_normalize.F; fi
if [ ! -L timeave_reset.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_reset.F timeave_reset.F; fi
if [ ! -L timeave_statvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statvars.F timeave_statvars.F; fi
if [ ! -L timeave_statv_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statv_write.F timeave_statv_write.F; fi
if [ ! -L timeave_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_surf_flux.F timeave_surf_flux.F; fi
if [ ! -L all_proc_die.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/all_proc_die.F all_proc_die.F; fi
if [ ! -L bar2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar2.F bar2.F; fi
if [ ! -L bar_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar_check.F bar_check.F; fi
if [ ! -L barrier.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/barrier.F barrier.F; fi
if [ ! -L check_threads.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/check_threads.F check_threads.F; fi
if [ ! -L comm_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/comm_stats.F comm_stats.F; fi
if [ ! -L cumulsum_z_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/cumulsum_z_tile.F cumulsum_z_tile.F; fi
if [ ! -L different_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/different_multiple.F different_multiple.F; fi
if [ ! -L diff_phase_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/diff_phase_multiple.F diff_phase_multiple.F; fi
if [ ! -L eeboot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeboot.F eeboot.F; fi
if [ ! -L eedata_example.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eedata_example.F eedata_example.F; fi
if [ ! -L eeintro_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeintro_msg.F eeintro_msg.F; fi
if [ ! -L eeset_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeset_parms.F eeset_parms.F; fi
if [ ! -L eewrite_eeenv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eewrite_eeenv.F eewrite_eeenv.F; fi
if [ ! -L exch0_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r4.F exch0_r4.F; fi
if [ ! -L exch0_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r8.F exch0_r8.F; fi
if [ ! -L exch0_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rl.F exch0_rl.F; fi
if [ ! -L exch0_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rs.F exch0_rs.F; fi
if [ ! -L exch1_bg_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r4_cube.F exch1_bg_r4_cube.F; fi
if [ ! -L exch1_bg_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r8_cube.F exch1_bg_r8_cube.F; fi
if [ ! -L exch1_bg_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rl_cube.F exch1_bg_rl_cube.F; fi
if [ ! -L exch1_bg_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rs_cube.F exch1_bg_rs_cube.F; fi
if [ ! -L exch1_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4_cube.F exch1_r4_cube.F; fi
if [ ! -L exch1_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4.F exch1_r4.F; fi
if [ ! -L exch1_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8_cube.F exch1_r8_cube.F; fi
if [ ! -L exch1_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8.F exch1_r8.F; fi
if [ ! -L exch1_rl_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_ad.F exch1_rl_ad.F; fi
if [ ! -L exch1_rl_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube_ad.F exch1_rl_cube_ad.F; fi
if [ ! -L exch1_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube.F exch1_rl_cube.F; fi
if [ ! -L exch1_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl.F exch1_rl.F; fi
if [ ! -L exch1_rs_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_ad.F exch1_rs_ad.F; fi
if [ ! -L exch1_rs_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube_ad.F exch1_rs_cube_ad.F; fi
if [ ! -L exch1_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube.F exch1_rs_cube.F; fi
if [ ! -L exch1_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs.F exch1_rs.F; fi
if [ ! -L exch1_uv_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r4_cube.F exch1_uv_r4_cube.F; fi
if [ ! -L exch1_uv_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r8_cube.F exch1_uv_r8_cube.F; fi
if [ ! -L exch1_uv_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rl_cube.F exch1_uv_rl_cube.F; fi
if [ ! -L exch1_uv_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rs_cube.F exch1_uv_rs_cube.F; fi
if [ ! -L exch1_z_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r4_cube.F exch1_z_r4_cube.F; fi
if [ ! -L exch1_z_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r8_cube.F exch1_z_r8_cube.F; fi
if [ ! -L exch1_z_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rl_cube.F exch1_z_rl_cube.F; fi
if [ ! -L exch1_z_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rs_cube.F exch1_z_rs_cube.F; fi
if [ ! -L exch_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r4.F exch_3d_r4.F; fi
if [ ! -L exch_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r8.F exch_3d_r8.F; fi
if [ ! -L exch_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rl.F exch_3d_rl.F; fi
if [ ! -L exch_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rs.F exch_3d_rs.F; fi
if [ ! -L exch_cycle_ebl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_cycle_ebl.F exch_cycle_ebl.F; fi
if [ ! -L exch_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_init.F exch_init.F; fi
if [ ! -L exch_r4_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_x.F exch_r4_recv_get_x.F; fi
if [ ! -L exch_r4_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_y.F exch_r4_recv_get_y.F; fi
if [ ! -L exch_r4_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_x.F exch_r4_send_put_x.F; fi
if [ ! -L exch_r4_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_y.F exch_r4_send_put_y.F; fi
if [ ! -L exch_r8_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_x.F exch_r8_recv_get_x.F; fi
if [ ! -L exch_r8_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_y.F exch_r8_recv_get_y.F; fi
if [ ! -L exch_r8_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_x.F exch_r8_send_put_x.F; fi
if [ ! -L exch_r8_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_y.F exch_r8_send_put_y.F; fi
if [ ! -L exch_rl_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_x.F exch_rl_recv_get_x.F; fi
if [ ! -L exch_rl_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_y.F exch_rl_recv_get_y.F; fi
if [ ! -L exch_rl_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_x.F exch_rl_send_put_x.F; fi
if [ ! -L exch_rl_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_y.F exch_rl_send_put_y.F; fi
if [ ! -L exch_rs_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_x.F exch_rs_recv_get_x.F; fi
if [ ! -L exch_rs_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_y.F exch_rs_recv_get_y.F; fi
if [ ! -L exch_rs_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_x.F exch_rs_send_put_x.F; fi
if [ ! -L exch_rs_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_y.F exch_rs_send_put_y.F; fi
if [ ! -L exch_s3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r4.F exch_s3d_r4.F; fi
if [ ! -L exch_s3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r8.F exch_s3d_r8.F; fi
if [ ! -L exch_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rl.F exch_s3d_rl.F; fi
if [ ! -L exch_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rs.F exch_s3d_rs.F; fi
if [ ! -L exch_sm_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r4.F exch_sm_3d_r4.F; fi
if [ ! -L exch_sm_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r8.F exch_sm_3d_r8.F; fi
if [ ! -L exch_sm_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rl.F exch_sm_3d_rl.F; fi
if [ ! -L exch_sm_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rs.F exch_sm_3d_rs.F; fi
if [ ! -L exch_uv_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r4.F exch_uv_3d_r4.F; fi
if [ ! -L exch_uv_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r8.F exch_uv_3d_r8.F; fi
if [ ! -L exch_uv_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rl.F exch_uv_3d_rl.F; fi
if [ ! -L exch_uv_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rs.F exch_uv_3d_rs.F; fi
if [ ! -L exch_uv_agrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r4.F; fi
if [ ! -L exch_uv_agrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_r8.F; fi
if [ ! -L exch_uv_agrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rl.F; fi
if [ ! -L exch_uv_agrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rs.F exch_uv_agrid_3d_rs.F; fi
if [ ! -L exch_uv_bgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r4.F; fi
if [ ! -L exch_uv_bgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_r8.F; fi
if [ ! -L exch_uv_bgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rl.F; fi
if [ ! -L exch_uv_bgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rs.F exch_uv_bgrid_3d_rs.F; fi
if [ ! -L exch_uv_dgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r4.F; fi
if [ ! -L exch_uv_dgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_r8.F; fi
if [ ! -L exch_uv_dgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rl.F; fi
if [ ! -L exch_uv_dgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rs.F exch_uv_dgrid_3d_rs.F; fi
if [ ! -L exch_uv_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r4.F exch_uv_xy_r4.F; fi
if [ ! -L exch_uv_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r8.F exch_uv_xy_r8.F; fi
if [ ! -L exch_uv_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rl.F exch_uv_xy_rl.F; fi
if [ ! -L exch_uv_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rs.F exch_uv_xy_rs.F; fi
if [ ! -L exch_uv_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r4.F exch_uv_xyz_r4.F; fi
if [ ! -L exch_uv_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r8.F exch_uv_xyz_r8.F; fi
if [ ! -L exch_uv_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rl.F exch_uv_xyz_rl.F; fi
if [ ! -L exch_uv_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rs.F exch_uv_xyz_rs.F; fi
if [ ! -L exch_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r4.F exch_xy_r4.F; fi
if [ ! -L exch_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r8.F exch_xy_r8.F; fi
if [ ! -L exch_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rl.F exch_xy_rl.F; fi
if [ ! -L exch_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rs.F exch_xy_rs.F; fi
if [ ! -L exch_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r4.F exch_xyz_r4.F; fi
if [ ! -L exch_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r8.F exch_xyz_r8.F; fi
if [ ! -L exch_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rl.F exch_xyz_rl.F; fi
if [ ! -L exch_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rs.F exch_xyz_rs.F; fi
if [ ! -L exch_z_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r4.F exch_z_3d_r4.F; fi
if [ ! -L exch_z_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r8.F exch_z_3d_r8.F; fi
if [ ! -L exch_z_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rl.F exch_z_3d_rl.F; fi
if [ ! -L exch_z_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rs.F exch_z_3d_rs.F; fi
if [ ! -L fill_cs_corner_ag_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_ag_rl.F fill_cs_corner_ag_rl.F; fi
if [ ! -L fill_cs_corner_tr_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_tr_rl.F fill_cs_corner_tr_rl.F; fi
if [ ! -L fill_cs_corner_uv_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rl.F fill_cs_corner_uv_rl.F; fi
if [ ! -L fill_cs_corner_uv_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rs.F fill_cs_corner_uv_rs.F; fi
if [ ! -L fool_the_compiler.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fool_the_compiler.F fool_the_compiler.F; fi
if [ ! -L gather_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r4.F gather_2d_r4.F; fi
if [ ! -L gather_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r8.F gather_2d_r8.F; fi
if [ ! -L gather_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r4.F gather_2d_wh_r4.F; fi
if [ ! -L gather_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r8.F gather_2d_wh_r8.F; fi
if [ ! -L gather_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r4.F gather_vec_r4.F; fi
if [ ! -L gather_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r8.F gather_vec_r8.F; fi
if [ ! -L gather_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_xz.F gather_xz.F; fi
if [ ! -L gather_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_yz.F gather_yz.F; fi
if [ ! -L get_periodic_interval.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/get_periodic_interval.F get_periodic_interval.F; fi
if [ ! -L global_max.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_max.F global_max.F; fi
if [ ! -L global_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum.F global_sum.F; fi
if [ ! -L global_sum_singlecpu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_singlecpu.F global_sum_singlecpu.F; fi
if [ ! -L global_sum_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_tile.F global_sum_tile.F; fi
if [ ! -L global_vec_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_vec_sum.F global_vec_sum.F; fi
if [ ! -L gsum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsum.F gsum.F; fi
if [ ! -L ini_communication_patterns.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_communication_patterns.F ini_communication_patterns.F; fi
if [ ! -L ini_procs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_procs.F ini_procs.F; fi
if [ ! -L ini_threading_environment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_threading_environment.F ini_threading_environment.F; fi
if [ ! -L lef_zero.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/lef_zero.F lef_zero.F; fi
if [ ! -L main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/main.F main.F; fi
if [ ! -L master_cpu_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_io.F master_cpu_io.F; fi
if [ ! -L master_cpu_thread.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_thread.F master_cpu_thread.F; fi
if [ ! -L mds_byteswapi4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapi4.F mds_byteswapi4.F; fi
if [ ! -L mds_byteswapr4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr4.F mds_byteswapr4.F; fi
if [ ! -L mds_byteswapr8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr8.F mds_byteswapr8.F; fi
if [ ! -L mdsfindunit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mdsfindunit.F mdsfindunit.F; fi
if [ ! -L mds_flush.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_flush.F mds_flush.F; fi
if [ ! -L mds_reclen.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_reclen.F mds_reclen.F; fi
if [ ! -L memsync.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/memsync.F memsync.F; fi
if [ ! -L nml_change_syntax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_change_syntax.F nml_change_syntax.F; fi
if [ ! -L nml_set_terminator.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_set_terminator.F nml_set_terminator.F; fi
if [ ! -L open_copy_data_file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/open_copy_data_file.F open_copy_data_file.F; fi
if [ ! -L print.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/print.F print.F; fi
if [ ! -L reset_halo.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/reset_halo.F reset_halo.F; fi
if [ ! -L scatter_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r4.F scatter_2d_r4.F; fi
if [ ! -L scatter_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r8.F scatter_2d_r8.F; fi
if [ ! -L scatter_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r4.F scatter_2d_wh_r4.F; fi
if [ ! -L scatter_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r8.F scatter_2d_wh_r8.F; fi
if [ ! -L scatter_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r4.F scatter_vec_r4.F; fi
if [ ! -L scatter_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r8.F scatter_vec_r8.F; fi
if [ ! -L scatter_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_xz.F scatter_xz.F; fi
if [ ! -L scatter_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_yz.F scatter_yz.F; fi
if [ ! -L stop_if_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/stop_if_error.F stop_if_error.F; fi
if [ ! -L timers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timers.F timers.F; fi
if [ ! -L utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/utils.F utils.F; fi
if [ ! -L write_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/write_utils.F write_utils.F; fi
if [ ! -L adams_bashforth2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth2.F adams_bashforth2.F; fi
if [ ! -L adams_bashforth3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth3.F adams_bashforth3.F; fi
if [ ! -L add_walls2masks.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/add_walls2masks.F add_walls2masks.F; fi
if [ ! -L apply_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/apply_forcing.F apply_forcing.F; fi
if [ ! -L calc_3d_diffusivity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_3d_diffusivity.F calc_3d_diffusivity.F; fi
if [ ! -L calc_adv_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_adv_flow.F calc_adv_flow.F; fi
if [ ! -L calc_div_ghat.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_div_ghat.F calc_div_ghat.F; fi
if [ ! -L calc_eddy_stress.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_eddy_stress.F calc_eddy_stress.F; fi
if [ ! -L calc_grad_phi_fv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_fv.F calc_grad_phi_fv.F; fi
if [ ! -L calc_grad_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_hyd.F calc_grad_phi_hyd.F; fi
if [ ! -L calc_grad_phi_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_surf.F calc_grad_phi_surf.F; fi
if [ ! -L calc_grid_angles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grid_angles.F calc_grid_angles.F; fi
if [ ! -L calc_gw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_gw.F calc_gw.F; fi
if [ ! -L calc_ivdc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_ivdc.F calc_ivdc.F; fi
if [ ! -L calc_oce_mxlayer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_oce_mxlayer.F calc_oce_mxlayer.F; fi
if [ ! -L calc_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_phi_hyd.F calc_phi_hyd.F; fi
if [ ! -L calc_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_r_star.F calc_r_star.F; fi
if [ ! -L calc_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_surf_dr.F calc_surf_dr.F; fi
if [ ! -L calc_viscosity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_viscosity.F calc_viscosity.F; fi
if [ ! -L calc_wsurf_tr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_wsurf_tr.F calc_wsurf_tr.F; fi
if [ ! -L cg2d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_ex0.F cg2d_ex0.F; fi
if [ ! -L cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d.F cg2d.F; fi
if [ ! -L cg2d_nsa.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_nsa.F cg2d_nsa.F; fi
if [ ! -L cg2d_sr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_sr.F cg2d_sr.F; fi
if [ ! -L cg3d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d_ex0.F cg3d_ex0.F; fi
if [ ! -L cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d.F cg3d.F; fi
if [ ! -L check_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/check_pickup.F check_pickup.F; fi
if [ ! -L config_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_check.F config_check.F; fi
if [ ! -L config_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_summary.F config_summary.F; fi
if [ ! -L convective_adjustment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment.F convective_adjustment.F; fi
if [ ! -L convective_adjustment_ini.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment_ini.F convective_adjustment_ini.F; fi
if [ ! -L convectively_mixtracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convectively_mixtracer.F convectively_mixtracer.F; fi
if [ ! -L convective_weights.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_weights.F convective_weights.F; fi
if [ ! -L correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/correction_step.F correction_step.F; fi
if [ ! -L cycle_ab_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_ab_tracer.F cycle_ab_tracer.F; fi
if [ ! -L cycle_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_tracer.F cycle_tracer.F; fi
if [ ! -L diags_oceanic_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_oceanic_surf_flux.F diags_oceanic_surf_flux.F; fi
if [ ! -L diags_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_hyd.F diags_phi_hyd.F; fi
if [ ! -L diags_phi_rlow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_rlow.F diags_phi_rlow.F; fi
if [ ! -L diags_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_rho.F diags_rho.F; fi
if [ ! -L diags_sound_speed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_sound_speed.F diags_sound_speed.F; fi
if [ ! -L do_atmospheric_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_atmospheric_phys.F do_atmospheric_phys.F; fi
if [ ! -L do_fields_blocking_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_fields_blocking_exchanges.F do_fields_blocking_exchanges.F; fi
if [ ! -L do_stagger_fields_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_stagger_fields_exchanges.F do_stagger_fields_exchanges.F; fi
if [ ! -L do_statevars_diags.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_diags.F do_statevars_diags.F; fi
if [ ! -L do_statevars_tave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_tave.F do_statevars_tave.F; fi
if [ ! -L do_the_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_the_model_io.F do_the_model_io.F; fi
if [ ! -L do_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_write_pickup.F do_write_pickup.F; fi
if [ ! -L dynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/dynamics.F dynamics.F; fi
if [ ! -L external_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_fields_load.F external_fields_load.F; fi
if [ ! -L external_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing.F external_forcing.F; fi
if [ ! -L external_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing_surf.F external_forcing_surf.F; fi
if [ ! -L find_alpha.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_alpha.F find_alpha.F; fi
if [ ! -L find_hyd_press_1d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_hyd_press_1d.F find_hyd_press_1d.F; fi
if [ ! -L find_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_rho.F find_rho.F; fi
if [ ! -L forcing_surf_relax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forcing_surf_relax.F forcing_surf_relax.F; fi
if [ ! -L forward_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forward_step.F forward_step.F; fi
if [ ! -L freesurf_rescale_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freesurf_rescale_g.F freesurf_rescale_g.F; fi
if [ ! -L freeze_surface.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freeze_surface.F freeze_surface.F; fi
if [ ! -L grad_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/grad_sigma.F grad_sigma.F; fi
if [ ! -L gsw_teos10.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/gsw_teos10.F gsw_teos10.F; fi
if [ ! -L impldiff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/impldiff.F impldiff.F; fi
if [ ! -L ini_cartesian_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cartesian_grid.F ini_cartesian_grid.F; fi
if [ ! -L ini_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg2d.F ini_cg2d.F; fi
if [ ! -L ini_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg3d.F ini_cg3d.F; fi
if [ ! -L ini_cori.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cori.F ini_cori.F; fi
if [ ! -L ini_curvilinear_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_curvilinear_grid.F ini_curvilinear_grid.F; fi
if [ ! -L ini_cylinder_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cylinder_grid.F ini_cylinder_grid.F; fi
if [ ! -L ini_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_depths.F ini_depths.F; fi
if [ ! -L ini_dynvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_dynvars.F ini_dynvars.F; fi
if [ ! -L ini_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_eos.F ini_eos.F; fi
if [ ! -L ini_ffields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_ffields.F ini_ffields.F; fi
if [ ! -L ini_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_fields.F ini_fields.F; fi
if [ ! -L ini_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_forcing.F ini_forcing.F; fi
if [ ! -L ini_global_domain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_global_domain.F ini_global_domain.F; fi
if [ ! -L ini_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_grid.F ini_grid.F; fi
if [ ! -L ini_linear_phisurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_linear_phisurf.F ini_linear_phisurf.F; fi
if [ ! -L ini_local_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_local_grid.F ini_local_grid.F; fi
if [ ! -L ini_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_masks_etc.F ini_masks_etc.F; fi
if [ ! -L ini_mixing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mixing.F ini_mixing.F; fi
if [ ! -L ini_mnc_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mnc_vars.F ini_mnc_vars.F; fi
if [ ! -L ini_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_model_io.F ini_model_io.F; fi
if [ ! -L ini_nh_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_fields.F ini_nh_fields.F; fi
if [ ! -L ini_nh_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_vars.F ini_nh_vars.F; fi
if [ ! -L ini_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nlfs_vars.F ini_nlfs_vars.F; fi
if [ ! -L ini_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_parms.F ini_parms.F; fi
if [ ! -L ini_p_ground.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_p_ground.F ini_p_ground.F; fi
if [ ! -L ini_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_pressure.F ini_pressure.F; fi
if [ ! -L ini_psurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_psurf.F ini_psurf.F; fi
if [ ! -L ini_salt.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_salt.F ini_salt.F; fi
if [ ! -L ini_sigma_hfac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_sigma_hfac.F ini_sigma_hfac.F; fi
if [ ! -L ini_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_spherical_polar_grid.F ini_spherical_polar_grid.F; fi
if [ ! -L ini_theta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_theta.F ini_theta.F; fi
if [ ! -L initialise_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_fixed.F initialise_fixed.F; fi
if [ ! -L initialise_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_varia.F initialise_varia.F; fi
if [ ! -L ini_vel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vel.F ini_vel.F; fi
if [ ! -L ini_vertical_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vertical_grid.F ini_vertical_grid.F; fi
if [ ! -L integrate_for_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integrate_for_w.F integrate_for_w.F; fi
if [ ! -L integr_continuity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integr_continuity.F integr_continuity.F; fi
if [ ! -L load_fields_driver.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_fields_driver.F load_fields_driver.F; fi
if [ ! -L load_grid_spacing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_grid_spacing.F load_grid_spacing.F; fi
if [ ! -L load_ref_files.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_ref_files.F load_ref_files.F; fi
if [ ! -L main_do_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/main_do_loop.F main_do_loop.F; fi
if [ ! -L momentum_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/momentum_correction_step.F momentum_correction_step.F; fi
if [ ! -L packages_boot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_boot.F packages_boot.F; fi
if [ ! -L packages_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_check.F packages_check.F; fi
if [ ! -L packages_error_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_error_msg.F packages_error_msg.F; fi
if [ ! -L packages_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_fixed.F packages_init_fixed.F; fi
if [ ! -L packages_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_variables.F packages_init_variables.F; fi
if [ ! -L packages_print_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_print_msg.F packages_print_msg.F; fi
if [ ! -L packages_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_readparms.F packages_readparms.F; fi
if [ ! -L packages_unused_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_unused_msg.F packages_unused_msg.F; fi
if [ ! -L packages_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_write_pickup.F packages_write_pickup.F; fi
if [ ! -L plot_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/plot_field.F plot_field.F; fi
if [ ! -L port_rand.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/port_rand.F port_rand.F; fi
if [ ! -L post_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/post_cg3d.F post_cg3d.F; fi
if [ ! -L pre_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pre_cg3d.F pre_cg3d.F; fi
if [ ! -L pressure_for_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pressure_for_eos.F pressure_for_eos.F; fi
if [ ! -L read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/read_pickup.F read_pickup.F; fi
if [ ! -L remove_mean.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/remove_mean.F remove_mean.F; fi
if [ ! -L reset_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/reset_nlfs_vars.F reset_nlfs_vars.F; fi
if [ ! -L rotate_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_spherical_polar_grid.F rotate_spherical_polar_grid.F; fi
if [ ! -L rotate_uv2en.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_uv2en.F rotate_uv2en.F; fi
if [ ! -L salt_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/salt_integrate.F salt_integrate.F; fi
if [ ! -L seawater.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/seawater.F seawater.F; fi
if [ ! -L set_defaults.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_defaults.F set_defaults.F; fi
if [ ! -L set_grid_factors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_grid_factors.F set_grid_factors.F; fi
if [ ! -L set_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_parms.F set_parms.F; fi
if [ ! -L set_ref_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_ref_state.F set_ref_state.F; fi
if [ ! -L solve_for_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_for_pressure.F solve_for_pressure.F; fi
if [ ! -L solve_pentadiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_pentadiagonal.F solve_pentadiagonal.F; fi
if [ ! -L solve_tridiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_tridiagonal.F solve_tridiagonal.F; fi
if [ ! -L solve_uv_tridiago.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_uv_tridiago.F solve_uv_tridiago.F; fi
if [ ! -L state_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/state_summary.F state_summary.F; fi
if [ ! -L swfrac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/swfrac.F swfrac.F; fi
if [ ! -L taueddy_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_init_varia.F taueddy_init_varia.F; fi
if [ ! -L taueddy_tendency_apply.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_tendency_apply.F taueddy_tendency_apply.F; fi
if [ ! -L temp_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/temp_integrate.F temp_integrate.F; fi
if [ ! -L the_main_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_main_loop.F the_main_loop.F; fi
if [ ! -L the_model_main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_model_main.F the_model_main.F; fi
if [ ! -L thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/thermodynamics.F thermodynamics.F; fi
if [ ! -L timestep.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep.F timestep.F; fi
if [ ! -L timestep_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_tracer.F timestep_tracer.F; fi
if [ ! -L timestep_wvel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_wvel.F timestep_wvel.F; fi
if [ ! -L tracers_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_correction_step.F tracers_correction_step.F; fi
if [ ! -L tracers_iigw_correction.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_iigw_correction.F tracers_iigw_correction.F; fi
if [ ! -L turnoff_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/turnoff_model_io.F turnoff_model_io.F; fi
if [ ! -L update_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_cg2d.F update_cg2d.F; fi
if [ ! -L update_etah.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etah.F update_etah.F; fi
if [ ! -L update_etaws.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etaws.F update_etaws.F; fi
if [ ! -L update_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_masks_etc.F update_masks_etc.F; fi
if [ ! -L update_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_r_star.F update_r_star.F; fi
if [ ! -L update_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_sigma.F update_sigma.F; fi
if [ ! -L update_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_surf_dr.F update_surf_dr.F; fi
if [ ! -L write_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_grid.F write_grid.F; fi
if [ ! -L write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_pickup.F write_pickup.F; fi
if [ ! -L write_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_state.F write_state.F; fi
if [ ! -L gsl_ieee_env.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsl_ieee_env.c gsl_ieee_env.c; fi
if [ ! -L ptwrapper.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ptwrapper.c ptwrapper.c; fi
if [ ! -L setdir.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setdir.c setdir.c; fi
if [ ! -L setrlstk.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setrlstk.c setrlstk.c; fi
if [ ! -L sigreg.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/sigreg.c sigreg.c; fi
if [ ! -L tim.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/tim.c tim.c; fi
if [ ! -L timer_stats.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timer_stats.c timer_stats.c; fi
if [ ! -L CPP_EEOPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h CPP_EEOPTIONS.h; fi
if [ ! -L SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/SIZE.h SIZE.h; fi
if [ ! -L DEBUG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/DEBUG_OPTIONS.h DEBUG_OPTIONS.h; fi
if [ ! -L DIAGNOSTICS_CALC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_CALC.h DIAGNOSTICS_CALC.h; fi
if [ ! -L DIAGNOSTICS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS.h DIAGNOSTICS.h; fi
if [ ! -L DIAGNOSTICS_SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_SIZE.h DIAGNOSTICS_SIZE.h; fi
if [ ! -L DIAG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAG_OPTIONS.h DIAG_OPTIONS.h; fi
if [ ! -L DIAGSTATS_REGIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGSTATS_REGIONS.h DIAGSTATS_REGIONS.h; fi
if [ ! -L gad_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev1_dir.h gad_ad_check_lev1_dir.h; fi
if [ ! -L gad_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev2_dir.h gad_ad_check_lev2_dir.h; fi
if [ ! -L gad_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev3_dir.h gad_ad_check_lev3_dir.h; fi
if [ ! -L gad_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev4_dir.h gad_ad_check_lev4_dir.h; fi
if [ ! -L GAD_FLUX_LIMITER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_FLUX_LIMITER.h GAD_FLUX_LIMITER.h; fi
if [ ! -L GAD.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD.h GAD.h; fi
if [ ! -L GAD_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_OPTIONS.h GAD_OPTIONS.h; fi
if [ ! -L GAD_SOM_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_SOM_VARS.h GAD_SOM_VARS.h; fi
if [ ! -L MDSIO_BUFF_3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_3D.h MDSIO_BUFF_3D.h; fi
if [ ! -L MDSIO_BUFF_WH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_WH.h MDSIO_BUFF_WH.h; fi
if [ ! -L MDSIO_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_OPTIONS.h MDSIO_OPTIONS.h; fi
if [ ! -L MOM_COMMON_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_COMMON_OPTIONS.h MOM_COMMON_OPTIONS.h; fi
if [ ! -L MOM_VISC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_VISC.h MOM_VISC.h; fi
if [ ! -L MOM_FLUXFORM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM.h MOM_FLUXFORM.h; fi
if [ ! -L MOM_FLUXFORM_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MOM_FLUXFORM_OPTIONS.h; fi
if [ ! -L MOM_VECINV_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MOM_VECINV_OPTIONS.h; fi
if [ ! -L MONITOR.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR.h MONITOR.h; fi
if [ ! -L MONITOR_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR_OPTIONS.h MONITOR_OPTIONS.h; fi
if [ ! -L obcs_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev1_dir.h obcs_ad_check_lev1_dir.h; fi
if [ ! -L obcs_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev2_dir.h obcs_ad_check_lev2_dir.h; fi
if [ ! -L obcs_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev3_dir.h obcs_ad_check_lev3_dir.h; fi
if [ ! -L obcs_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev4_dir.h obcs_ad_check_lev4_dir.h; fi
if [ ! -L OBCS_FIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_FIELDS.h OBCS_FIELDS.h; fi
if [ ! -L OBCS_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_GRID.h OBCS_GRID.h; fi
if [ ! -L OBCS_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_OPTIONS.h OBCS_OPTIONS.h; fi
if [ ! -L OBCS_PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PARAMS.h OBCS_PARAMS.h; fi
if [ ! -L OBCS_PTRACERS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PTRACERS.h OBCS_PTRACERS.h; fi
if [ ! -L OBCS_SEAICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_SEAICE.h OBCS_SEAICE.h; fi
if [ ! -L ORLANSKI.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/ORLANSKI.h ORLANSKI.h; fi
if [ ! -L RW_MFLDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_MFLDS.h RW_MFLDS.h; fi
if [ ! -L RW_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_OPTIONS.h RW_OPTIONS.h; fi
if [ ! -L shelfice_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev1_dir.h shelfice_ad_check_lev1_dir.h; fi
if [ ! -L shelfice_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev2_dir.h shelfice_ad_check_lev2_dir.h; fi
if [ ! -L shelfice_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev3_dir.h shelfice_ad_check_lev3_dir.h; fi
if [ ! -L shelfice_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev4_dir.h shelfice_ad_check_lev4_dir.h; fi
if [ ! -L SHELFICE_COST.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_COST.h SHELFICE_COST.h; fi
if [ ! -L SHELFICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE.h SHELFICE.h; fi
if [ ! -L SHELFICE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_OPTIONS.h SHELFICE_OPTIONS.h; fi
if [ ! -L SHELFICE_TAVE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_TAVE.h SHELFICE_TAVE.h; fi
if [ ! -L TIMEAVE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_OPTIONS.h TIMEAVE_OPTIONS.h; fi
if [ ! -L TIMEAVE_STATV.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_STATV.h TIMEAVE_STATV.h; fi
if [ ! -L cmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_c.h cmumps_c.h; fi
if [ ! -L cmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_root.h cmumps_root.h; fi
if [ ! -L cmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_struc.h cmumps_struc.h; fi
if [ ! -L dmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_c.h dmumps_c.h; fi
if [ ! -L dmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_root.h dmumps_root.h; fi
if [ ! -L dmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_struc.h dmumps_struc.h; fi
if [ ! -L gklib_defs.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_defs.h gklib_defs.h; fi
if [ ! -L gklib_rename.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_rename.h gklib_rename.h; fi
if [ ! -L gklib_tls.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_tls.h gklib_tls.h; fi
if [ ! -L metis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/metis.h metis.h; fi
if [ ! -L mpicxx.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpicxx.h mpicxx.h; fi
if [ ! -L mpif.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpif.h mpif.h; fi
if [ ! -L mpi.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi.h mpi.h; fi
if [ ! -L mpiof.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpiof.h mpiof.h; fi
if [ ! -L mpio.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpio.h mpio.h; fi
if [ ! -L mpi_proto.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi_proto.h mpi_proto.h; fi
if [ ! -L mumps_compat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_compat.h mumps_compat.h; fi
if [ ! -L mumps_c_types.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_c_types.h mumps_c_types.h; fi
if [ ! -L mumps_int_def.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_int_def.h mumps_int_def.h; fi
if [ ! -L parmetis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/parmetis.h parmetis.h; fi
if [ ! -L petscao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscao.h petscao.h; fi
if [ ! -L petscbag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbag.h petscbag.h; fi
if [ ! -L petscblaslapack.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack.h petscblaslapack.h; fi
if [ ! -L petscblaslapack_mangle.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack_mangle.h petscblaslapack_mangle.h; fi
if [ ! -L petscbm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbm.h petscbm.h; fi
if [ ! -L petscbt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbt.h petscbt.h; fi
if [ ! -L petsccharacteristic.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccharacteristic.h petsccharacteristic.h; fi
if [ ! -L petscconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf.h petscconf.h; fi
if [ ! -L petscconfiginfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconfiginfo.h petscconfiginfo.h; fi
if [ ! -L petscconf_poison.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf_poison.h petscconf_poison.h; fi
if [ ! -L petscconvest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconvest.h petscconvest.h; fi
if [ ! -L petsccxxcomplexfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccxxcomplexfix.h petsccxxcomplexfix.h; fi
if [ ! -L petscdevice_cuda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cuda.h petscdevice_cuda.h; fi
if [ ! -L petscdevice_cupm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cupm.h petscdevice_cupm.h; fi
if [ ! -L petscdevice.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice.h petscdevice.h; fi
if [ ! -L petscdevice_hip.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_hip.h petscdevice_hip.h; fi
if [ ! -L petscdevicetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevicetypes.h petscdevicetypes.h; fi
if [ ! -L petscdmadaptor.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptor.h petscdmadaptor.h; fi
if [ ! -L petscdmadaptortypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptortypes.h petscdmadaptortypes.h; fi
if [ ! -L petscdmceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmceed.h petscdmceed.h; fi
if [ ! -L petscdmcomposite.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmcomposite.h petscdmcomposite.h; fi
if [ ! -L petscdmda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmda.h petscdmda.h; fi
if [ ! -L petscdmdatypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmdatypes.h petscdmdatypes.h; fi
if [ ! -L petscdmfield.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmfield.h petscdmfield.h; fi
if [ ! -L petscdmforest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmforest.h petscdmforest.h; fi
if [ ! -L petscdm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdm.h petscdm.h; fi
if [ ! -L petscdmlabelephemeral.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabelephemeral.h petscdmlabelephemeral.h; fi
if [ ! -L petscdmlabel.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabel.h petscdmlabel.h; fi
if [ ! -L petscdmlabeltypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabeltypes.h petscdmlabeltypes.h; fi
if [ ! -L petscdmmoab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmmoab.h petscdmmoab.h; fi
if [ ! -L petscdmnetwork.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmnetwork.h petscdmnetwork.h; fi
if [ ! -L petscdmpatch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmpatch.h petscdmpatch.h; fi
if [ ! -L petscdmplexceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexceed.h petscdmplexceed.h; fi
if [ ! -L petscdmplexegads.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexegads.h petscdmplexegads.h; fi
if [ ! -L petscdmplex.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplex.h petscdmplex.h; fi
if [ ! -L petscdmplextransform.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransform.h petscdmplextransform.h; fi
if [ ! -L petscdmplextransformtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransformtypes.h petscdmplextransformtypes.h; fi
if [ ! -L petscdmplextypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextypes.h petscdmplextypes.h; fi
if [ ! -L petscdmproduct.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmproduct.h petscdmproduct.h; fi
if [ ! -L petscdmredundant.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmredundant.h petscdmredundant.h; fi
if [ ! -L petscdmshell.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmshell.h petscdmshell.h; fi
if [ ! -L petscdmsliced.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmsliced.h petscdmsliced.h; fi
if [ ! -L petscdmstag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmstag.h petscdmstag.h; fi
if [ ! -L petscdmswarm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmswarm.h petscdmswarm.h; fi
if [ ! -L petscdmtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmtypes.h petscdmtypes.h; fi
if [ ! -L petscdraw.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdraw.h petscdraw.h; fi
if [ ! -L petscdrawtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdrawtypes.h petscdrawtypes.h; fi
if [ ! -L petscds.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscds.h petscds.h; fi
if [ ! -L petscdstypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdstypes.h petscdstypes.h; fi
if [ ! -L petscdt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdt.h petscdt.h; fi
if [ ! -L petscdualspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdualspace.h petscdualspace.h; fi
if [ ! -L petscerror.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscerror.h petscerror.h; fi
if [ ! -L petscfeceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfeceed.h petscfeceed.h; fi
if [ ! -L petscfe.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfe.h petscfe.h; fi
if [ ! -L petscfetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfetypes.h petscfetypes.h; fi
if [ ! -L petscfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfix.h petscfix.h; fi
if [ ! -L petscfvceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvceed.h petscfvceed.h; fi
if [ ! -L petscfv.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfv.h petscfv.h; fi
if [ ! -L petscfvtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvtypes.h petscfvtypes.h; fi
if [ ! -L petsc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsc.h petsc.h; fi
if [ ! -L petscis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscis.h petscis.h; fi
if [ ! -L petscistypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscistypes.h petscistypes.h; fi
if [ ! -L petscksp.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscksp.h petscksp.h; fi
if [ ! -L petsclandau.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclandau.h petsclandau.h; fi
if [ ! -L petsclayouthdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclayouthdf5.h petsclayouthdf5.h; fi
if [ ! -L petsclogdeprecated.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogdeprecated.h petsclogdeprecated.h; fi
if [ ! -L petsclog.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclog.h petsclog.h; fi
if [ ! -L petsclogtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogtypes.h petsclogtypes.h; fi
if [ ! -L petscmachineinfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmachineinfo.h petscmachineinfo.h; fi
if [ ! -L petscmacros.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmacros.h petscmacros.h; fi
if [ ! -L petscmatcoarsen.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatcoarsen.h petscmatcoarsen.h; fi
if [ ! -L petscmatelemental.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatelemental.h petscmatelemental.h; fi
if [ ! -L petscmat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmat.h petscmat.h; fi
if [ ! -L petscmath.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmath.h petscmath.h; fi
if [ ! -L petscmathtool.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathtool.h petscmathtool.h; fi
if [ ! -L petscmathypre.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathypre.h petscmathypre.h; fi
if [ ! -L petscmatlab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatlab.h petscmatlab.h; fi
if [ ! -L petscoptions.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscoptions.h petscoptions.h; fi
if [ ! -L petscpartitioner.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpartitioner.h petscpartitioner.h; fi
if [ ! -L petscpc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpc.h petscpc.h; fi
if [ ! -L petscpctypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpctypes.h petscpctypes.h; fi
if [ ! -L petscpf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpf.h petscpf.h; fi
if [ ! -L petscpkg_version.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpkg_version.h petscpkg_version.h; fi
if [ ! -L petscsection.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsection.h petscsection.h; fi
if [ ! -L petscsectiontypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsectiontypes.h petscsectiontypes.h; fi
if [ ! -L petscsf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsf.h petscsf.h; fi
if [ ! -L petscsftypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsftypes.h petscsftypes.h; fi
if [ ! -L petscsnes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnes.h petscsnes.h; fi
if [ ! -L petscsnestypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnestypes.h petscsnestypes.h; fi
if [ ! -L petscspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscspace.h petscspace.h; fi
if [ ! -L petscstring.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscstring.h petscstring.h; fi
if [ ! -L petscsys.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsys.h petscsys.h; fi
if [ ! -L petscsystypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsystypes.h petscsystypes.h; fi
if [ ! -L petsctao_deprecations.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao_deprecations.h petsctao_deprecations.h; fi
if [ ! -L petsctao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao.h petsctao.h; fi
if [ ! -L petsctaolinesearch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctaolinesearch.h petsctaolinesearch.h; fi
if [ ! -L petsctime.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctime.h petsctime.h; fi
if [ ! -L petscts.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscts.h petscts.h; fi
if [ ! -L petscvec.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscvec.h petscvec.h; fi
if [ ! -L petscversion.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscversion.h petscversion.h; fi
if [ ! -L petscviennacl.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviennacl.h petscviennacl.h; fi
if [ ! -L petscviewerexodusii.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerexodusii.h petscviewerexodusii.h; fi
if [ ! -L petscviewer.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewer.h petscviewer.h; fi
if [ ! -L petscviewerhdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerhdf5.h petscviewerhdf5.h; fi
if [ ! -L petscviewersaws.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewersaws.h petscviewersaws.h; fi
if [ ! -L petscviewertypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewertypes.h petscviewertypes.h; fi
if [ ! -L petscwebclient.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscwebclient.h petscwebclient.h; fi
if [ ! -L smumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_c.h smumps_c.h; fi
if [ ! -L smumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_root.h smumps_root.h; fi
if [ ! -L smumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_struc.h smumps_struc.h; fi
if [ ! -L zconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zconf.h zconf.h; fi
if [ ! -L zlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zlib.h zlib.h; fi
if [ ! -L zmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_c.h zmumps_c.h; fi
if [ ! -L zmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_root.h zmumps_root.h; fi
if [ ! -L zmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_struc.h zmumps_struc.h; fi
if [ ! -L BAR2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BAR2.h BAR2.h; fi
if [ ! -L BARRIER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BARRIER.h BARRIER.h; fi
if [ ! -L CPP_EEMACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CPP_EEMACROS.h CPP_EEMACROS.h; fi
if [ ! -L CUMULSUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CUMULSUM.h CUMULSUM.h; fi
if [ ! -L DEF_IN_MAKEFILE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/DEF_IN_MAKEFILE.h DEF_IN_MAKEFILE.h; fi
if [ ! -L EEBUFF_SCPU.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEBUFF_SCPU.h EEBUFF_SCPU.h; fi
if [ ! -L EEPARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEPARAMS.h EEPARAMS.h; fi
if [ ! -L EESUPPORT.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EESUPPORT.h EESUPPORT.h; fi
if [ ! -L EXCH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EXCH.h EXCH.h; fi
if [ ! -L GLOBAL_MAX.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_MAX.h GLOBAL_MAX.h; fi
if [ ! -L GLOBAL_SUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_SUM.h GLOBAL_SUM.h; fi
if [ ! -L MAIN_PDIRECTIVES1.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES1.h MAIN_PDIRECTIVES1.h; fi
if [ ! -L MAIN_PDIRECTIVES2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES2.h MAIN_PDIRECTIVES2.h; fi
if [ ! -L MPI_INFO.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MPI_INFO.h MPI_INFO.h; fi
if [ ! -L SIGREG.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/SIGREG.h SIGREG.h; fi
if [ ! -L CG2D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG2D.h CG2D.h; fi
if [ ! -L CG3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG3D.h CG3D.h; fi
if [ ! -L CPP_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h CPP_OPTIONS.h; fi
if [ ! -L DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXC_MACROS.h DXC_MACROS.h; fi
if [ ! -L DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXF_MACROS.h DXF_MACROS.h; fi
if [ ! -L DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXG_MACROS.h DXG_MACROS.h; fi
if [ ! -L DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXV_MACROS.h DXV_MACROS.h; fi
if [ ! -L DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYC_MACROS.h DYC_MACROS.h; fi
if [ ! -L DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYF_MACROS.h DYF_MACROS.h; fi
if [ ! -L DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYG_MACROS.h DYG_MACROS.h; fi
if [ ! -L DYNVARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYNVARS.h DYNVARS.h; fi
if [ ! -L DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYU_MACROS.h DYU_MACROS.h; fi
if [ ! -L EOS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/EOS.h EOS.h; fi
if [ ! -L FCORI_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FCORI_MACROS.h FCORI_MACROS.h; fi
if [ ! -L FFIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FFIELDS.h FFIELDS.h; fi
if [ ! -L GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID.h GRID.h; fi
if [ ! -L GRID_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID_MACROS.h GRID_MACROS.h; fi
if [ ! -L HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACC_MACROS.h HFACC_MACROS.h; fi
if [ ! -L HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACS_MACROS.h HFACS_MACROS.h; fi
if [ ! -L HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACW_MACROS.h HFACW_MACROS.h; fi
if [ ! -L MASKS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKS_MACROS.h MASKS_MACROS.h; fi
if [ ! -L MASKW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKW_MACROS.h MASKW_MACROS.h; fi
if [ ! -L NH_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/NH_VARS.h NH_VARS.h; fi
if [ ! -L PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/PARAMS.h PARAMS.h; fi
if [ ! -L RA_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RA_MACROS.h RA_MACROS.h; fi
if [ ! -L RAS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAS_MACROS.h RAS_MACROS.h; fi
if [ ! -L RAW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAW_MACROS.h RAW_MACROS.h; fi
if [ ! -L RECIP_DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXC_MACROS.h RECIP_DXC_MACROS.h; fi
if [ ! -L RECIP_DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXF_MACROS.h RECIP_DXF_MACROS.h; fi
if [ ! -L RECIP_DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXG_MACROS.h RECIP_DXG_MACROS.h; fi
if [ ! -L RECIP_DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXV_MACROS.h RECIP_DXV_MACROS.h; fi
if [ ! -L RECIP_DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYC_MACROS.h RECIP_DYC_MACROS.h; fi
if [ ! -L RECIP_DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYF_MACROS.h RECIP_DYF_MACROS.h; fi
if [ ! -L RECIP_DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYG_MACROS.h RECIP_DYG_MACROS.h; fi
if [ ! -L RECIP_DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYU_MACROS.h RECIP_DYU_MACROS.h; fi
if [ ! -L RECIP_HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACC_MACROS.h RECIP_HFACC_MACROS.h; fi
if [ ! -L RECIP_HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACS_MACROS.h RECIP_HFACS_MACROS.h; fi
if [ ! -L RECIP_HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACW_MACROS.h RECIP_HFACW_MACROS.h; fi
if [ ! -L RESTART.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RESTART.h RESTART.h; fi
if [ ! -L SET_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SET_GRID.h SET_GRID.h; fi
if [ ! -L SOLVE_FOR_PRESSURE3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE3D.h SOLVE_FOR_PRESSURE3D.h; fi
if [ ! -L SOLVE_FOR_PRESSURE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE.h SOLVE_FOR_PRESSURE.h; fi
if [ ! -L SURFACE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SURFACE.h SURFACE.h; fi
if [ ! -L TANPHIATU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATU_MACROS.h TANPHIATU_MACROS.h; fi
if [ ! -L TANPHIATV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATV_MACROS.h TANPHIATV_MACROS.h; fi
if [ ! -L THE_MODEL_COMMON_BLOCKS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/THE_MODEL_COMMON_BLOCKS.h THE_MODEL_COMMON_BLOCKS.h; fi
if [ ! -L XC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/XC_MACROS.h XC_MACROS.h; fi
if [ ! -L YC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/YC_MACROS.h YC_MACROS.h; fi
Creating FC_NAMEMANGLE.h ...
echo "#define FC_NAMEMANGLE(X)  X ## _" &gt; FC_NAMEMANGLE.h
Creating BUILD_INFO.h ...
echo "#define THISVER 'checkpoint68i'" &gt; BUILD_INFO.h
echo "#define THISUSER 'jenkins'" &gt;&gt; BUILD_INFO.h
echo "#define THISDATE 'Wed Sep  3 10:43:26 AM PDT 2025'" &gt;&gt; BUILD_INFO.h
echo "#define THISHOST 'Debian-12-VM'" &gt;&gt; BUILD_INFO.h
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build'
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/xmakedepend -f Makefile -o .f -DWORDLENGTH=4 -DNML_TERMINATOR -DALLOW_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_ETIME_SBR -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -DHAVE_FLUSH  -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu -I/usr/include cpl_issm.F do_oceanic_phys.F eeboot_minimal.F eedie.F chksum_tiled.F debug_call.F debug_cs_corner_uv.F debug_enter.F debug_fld_stats_rl.F debug_fld_stats_rs.F debug_leave.F debug_msg.F debug_stats_rl.F debug_stats_rs.F fill_in_corners_rl.F write_fullarray_rl.F write_fullarray_rs.F diag_calc_psivel.F diag_cg2d.F diagnostics_addtolist.F diagnostics_calc_phivel.F diagnostics_check.F diagnostics_clear.F diagnostics_fill.F diagnostics_fill_field.F diagnostics_fill_rs.F diagnostics_fill_state.F diagnostics_fract_fill.F diagnostics_ini_io.F diagnostics_init_early.F diagnostics_init_fixed.F diagnostics_init_varia.F diagnostics_interp_p2p.F diagnostics_interp_vert.F diagnostics_is_on.F diagnostics_list_check.F diagnostics_main_init.F diagnostics_mnc_out.F diagnostics_out.F diagnostics_readparms.F diagnostics_read_pickup.F diagnostics_scale_fill.F diagnostics_scale_fill_rs.F diagnostics_set_calc.F diagnostics_setdiag.F diagnostics_set_levels.F diagnostics_set_pointers.F diagnostics_status_error.F diagnostics_sum_levels.F diagnostics_summary.F diagnostics_switch_onoff.F diagnostics_utils.F diagnostics_write_adj.F diagnostics_write.F diagnostics_write_pickup.F diagstats_ascii_out.F diagstats_calc.F diagstats_clear.F diagstats_close_io.F diagstats_fill.F diagstats_global.F diagstats_ini_io.F diagstats_local.F diagstats_mnc_out.F diagstats_others_calc.F diagstats_output.F diagstats_setdiag.F diagstats_set_pointers.F diagstats_set_regions.F diag_vegtile_fill.F gad_advection.F gad_advscheme.F gad_biharm_r.F gad_biharm_x.F gad_biharm_y.F gad_c2_adv_r.F gad_c2_adv_x.F gad_c2_adv_y.F gad_c2_impl_r.F gad_c4_adv_r.F gad_c4_adv_x.F gad_c4_adv_y.F gad_calc_rhs.F gad_check.F gad_del2.F gad_diagnostics_init.F gad_diagnostics_state.F gad_diff_r.F gad_diff_x.F gad_diff_y.F gad_dst2u1_adv_r.F gad_dst2u1_adv_x.F gad_dst2u1_adv_y.F gad_dst2u1_impl_r.F gad_dst3_adv_r.F gad_dst3_adv_x.F gad_dst3_adv_y.F gad_dst3fl_adv_r.F gad_dst3fl_adv_x.F gad_dst3fl_adv_y.F gad_dst3fl_impl_r.F gad_exch_som.F gad_fluxlimit_adv_r.F gad_fluxlimit_adv_x.F gad_fluxlimit_adv_y.F gad_fluxlimit_impl_r.F gad_grad_x.F gad_grad_y.F gad_implicit_r.F gad_init_fixed.F gad_init_varia.F gad_os7mp_adv_r.F gad_os7mp_adv_x.F gad_os7mp_adv_y.F gad_osc_hat_r.F gad_osc_hat_x.F gad_osc_hat_y.F gad_osc_mul_r.F gad_osc_mul_x.F gad_osc_mul_y.F gad_plm_fun.F gad_ppm_adv_r.F gad_ppm_adv_x.F gad_ppm_adv_y.F gad_ppm_flx_r.F gad_ppm_flx_x.F gad_ppm_flx_y.F gad_ppm_fun.F gad_ppm_hat_r.F gad_ppm_hat_x.F gad_ppm_hat_y.F gad_ppm_p3e_r.F gad_ppm_p3e_x.F gad_ppm_p3e_y.F gad_pqm_adv_r.F gad_pqm_adv_x.F gad_pqm_adv_y.F gad_pqm_flx_r.F gad_pqm_flx_x.F gad_pqm_flx_y.F gad_pqm_fun.F gad_pqm_hat_r.F gad_pqm_hat_x.F gad_pqm_hat_y.F gad_pqm_p5e_r.F gad_pqm_p5e_x.F gad_pqm_p5e_y.F gad_read_pickup.F gad_som_advect.F gad_som_adv_r.F gad_som_adv_x.F gad_som_adv_y.F gad_som_exchanges.F gad_som_fill_cs_corner.F gad_som_lim_r.F gad_som_prep_cs_corner.F gad_u3_adv_r.F gad_u3_adv_x.F gad_u3_adv_y.F gad_u3c4_impl_r.F gad_write_pickup.F salt_fill.F mdsio_buffertorl.F mdsio_buffertors.F mdsio_check4file.F mdsio_facef_read.F mdsio_gl.F mdsio_gl_slice.F mdsio_pass_r4torl.F mdsio_pass_r4tors.F mdsio_pass_r8torl.F mdsio_pass_r8tors.F mdsio_rd_rec_rl.F mdsio_rd_rec_rs.F mdsio_read_field.F mdsio_read_meta.F mdsio_read_section.F mdsio_read_tape.F mdsio_readvec_loc.F mdsio_read_whalos.F mdsio_rw_field.F mdsio_rw_slice.F mdsio_seg4torl.F mdsio_seg4tors.F mdsio_seg8torl.F mdsio_seg8tors.F mdsio_segxtorx_2d.F mdsio_write_field.F mdsio_writelocal.F mdsio_write_meta.F mdsio_write_section.F mdsio_write_tape.F mdsio_writevec_loc.F mdsio_write_whalos.F mdsio_wr_metafiles.F mdsio_wr_rec_rl.F mdsio_wr_rec_rs.F mom_calc_3d_strain.F mom_calc_absvort3.F mom_calc_hdiv.F mom_calc_hfacz.F mom_calc_ke.F mom_calc_relvort3.F mom_calc_smag_3d.F mom_calc_strain.F mom_calc_tension.F mom_calc_visc.F mom_diagnostics_init.F mom_hdissip.F mom_init_fixed.F mom_quasihydrostatic.F mom_u_botdrag_coeff.F mom_u_coriolis_nh.F mom_u_implicit_r.F mom_u_metric_nh.F mom_u_rviscflux.F mom_u_sidedrag.F mom_uv_smag_3d.F mom_v_botdrag_coeff.F mom_v_coriolis_nh.F mom_v_implicit_r.F mom_visc_qgl_limit.F mom_visc_qgl_stretch.F mom_v_metric_nh.F mom_v_rviscflux.F mom_v_sidedrag.F mom_w_coriolis_nh.F mom_w_metric_nh.F mom_w_sidedrag.F mom_w_smag_3d.F mom_calc_rtrans.F mom_fluxform.F mom_u_adv_uu.F mom_u_adv_vu.F mom_u_adv_wu.F mom_u_coriolis.F mom_u_del2u.F mom_u_metric_cylinder.F mom_u_metric_sphere.F mom_uv_boundary.F mom_u_xviscflux.F mom_u_yviscflux.F mom_v_adv_uv.F mom_v_adv_vv.F mom_v_adv_wv.F mom_v_coriolis.F mom_v_del2v.F mom_v_metric_cylinder.F mom_v_metric_sphere.F mom_v_xviscflux.F mom_v_yviscflux.F mom_vecinv.F mom_vi_coriolis.F mom_vi_del2uv.F mom_vi_hdissip.F mom_vi_u_coriolis_c4.F mom_vi_u_coriolis.F mom_vi_u_grad_ke.F mom_vi_u_vertshear.F mom_vi_v_coriolis_c4.F mom_vi_v_coriolis.F mom_vi_v_grad_ke.F mom_vi_v_vertshear.F mon_advcfl.F mon_advcflw2.F mon_advcflw.F mon_calc_advcfl.F mon_calc_stats_rl.F mon_calc_stats_rs.F mon_init.F monitor_ad.F monitor.F monitor_g.F mon_ke.F mon_out.F mon_printstats_rl.F mon_printstats_rs.F mon_set_iounit.F mon_set_pref.F mon_solution.F mon_stats_latbnd_rl.F mon_stats_rl.F mon_stats_rs.F mon_surfcor.F mon_vort3.F mon_writestats_rl.F mon_writestats_rs.F obcs_add_tides.F obcs_adjust.F obcs_adjust_uvice.F obcs_apply_eta.F obcs_apply_ptracer.F obcs_apply_r_star.F obcs_apply_seaice.F obcs_apply_surf_dr.F obcs_apply_ts.F obcs_apply_uv.F obcs_apply_uvice.F obcs_apply_w.F obcs_balance_flow.F obcs_calc.F obcs_calc_stevens.F obcs_check_depths.F obcs_check.F obcs_copy_tracer.F obcs_copy_uv_n.F obcs_diag_balance.F obcs_exchanges.F obcs_exf_load.F obcs_fields_load.F obcs_init_fixed.F obcs_init_variables.F obcs_monitor.F obcs_mon_stats.F obcs_output.F obcs_prescribe_read.F obcs_readparms.F obcs_read_pickup.F obcs_save_uv_n.F obcs_seaice_sponge.F obcs_set_connect.F obcs_sponge.F obcs_u1_adv_tracer.F obcs_write_pickup.F orlanski_east.F orlanski_init.F orlanski_north.F orlanski_south.F orlanski_west.F get_write_global_fld.F read_fld_xy_rl.F read_fld_xy_rs.F read_fld_xyz_rl.F read_fld_xyz_rs.F read_glvec_rl.F read_glvec_rs.F read_mflds.F read_rec.F rw_get_suffix.F set_write_global_fld.F write_fld_3d_rl.F write_fld_3d_rs.F write_fld_s3d_rl.F write_fld_s3d_rs.F write_fld_xy_rl.F write_fld_xy_rs.F write_fld_xyz_rl.F write_fld_xyz_rs.F write_glvec_rl.F write_glvec_rs.F write_local_rl.F write_local_rs.F write_rec.F shelfice_check.F shelfice_cost_accumulate.F shelfice_cost_final.F shelfice_cost_shifwflx.F shelfice_diagnostics_drag.F shelfice_forcing.F shelfice_forcing_surf.F shelfice_init_depths.F shelfice_init_fixed.F shelfice_init_varia.F shelfice_mask_seaice.F shelfice_mnc_init.F shelfice_output.F shelfice_readparms.F shelfice_read_pickup.F shelfice_remesh_calc_w.F shelfice_remesh_c_mask.F shelfice_remeshing.F shelfice_remesh_state.F shelfice_remesh_uv_mask.F shelfice_step_icemass.F shelfice_thermodynamics.F shelfice_u_drag_coeff.F shelfice_v_drag_coeff.F shelfice_write_pickup.F timeave_cumul_1k1t.F timeave_cumul_1t.F timeave_cumul_1vfc.F timeave_cumul_2v.F timeave_cumul_2vfc.F timeave_cumulate.F timeave_cumul_dif_1t.F timeave_init_fixed.F timeave_norma_2v.F timeave_normalize.F timeave_reset.F timeave_statvars.F timeave_statv_write.F timeave_surf_flux.F all_proc_die.F bar2.F bar_check.F barrier.F check_threads.F comm_stats.F cumulsum_z_tile.F different_multiple.F diff_phase_multiple.F eeboot.F eedata_example.F eeintro_msg.F eeset_parms.F eewrite_eeenv.F exch0_r4.F exch0_r8.F exch0_rl.F exch0_rs.F exch1_bg_r4_cube.F exch1_bg_r8_cube.F exch1_bg_rl_cube.F exch1_bg_rs_cube.F exch1_r4_cube.F exch1_r4.F exch1_r8_cube.F exch1_r8.F exch1_rl_ad.F exch1_rl_cube_ad.F exch1_rl_cube.F exch1_rl.F exch1_rs_ad.F exch1_rs_cube_ad.F exch1_rs_cube.F exch1_rs.F exch1_uv_r4_cube.F exch1_uv_r8_cube.F exch1_uv_rl_cube.F exch1_uv_rs_cube.F exch1_z_r4_cube.F exch1_z_r8_cube.F exch1_z_rl_cube.F exch1_z_rs_cube.F exch_3d_r4.F exch_3d_r8.F exch_3d_rl.F exch_3d_rs.F exch_cycle_ebl.F exch_init.F exch_r4_recv_get_x.F exch_r4_recv_get_y.F exch_r4_send_put_x.F exch_r4_send_put_y.F exch_r8_recv_get_x.F exch_r8_recv_get_y.F exch_r8_send_put_x.F exch_r8_send_put_y.F exch_rl_recv_get_x.F exch_rl_recv_get_y.F exch_rl_send_put_x.F exch_rl_send_put_y.F exch_rs_recv_get_x.F exch_rs_recv_get_y.F exch_rs_send_put_x.F exch_rs_send_put_y.F exch_s3d_r4.F exch_s3d_r8.F exch_s3d_rl.F exch_s3d_rs.F exch_sm_3d_r4.F exch_sm_3d_r8.F exch_sm_3d_rl.F exch_sm_3d_rs.F exch_uv_3d_r4.F exch_uv_3d_r8.F exch_uv_3d_rl.F exch_uv_3d_rs.F exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rs.F exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rs.F exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rs.F exch_uv_xy_r4.F exch_uv_xy_r8.F exch_uv_xy_rl.F exch_uv_xy_rs.F exch_uv_xyz_r4.F exch_uv_xyz_r8.F exch_uv_xyz_rl.F exch_uv_xyz_rs.F exch_xy_r4.F exch_xy_r8.F exch_xy_rl.F exch_xy_rs.F exch_xyz_r4.F exch_xyz_r8.F exch_xyz_rl.F exch_xyz_rs.F exch_z_3d_r4.F exch_z_3d_r8.F exch_z_3d_rl.F exch_z_3d_rs.F fill_cs_corner_ag_rl.F fill_cs_corner_tr_rl.F fill_cs_corner_uv_rl.F fill_cs_corner_uv_rs.F fool_the_compiler.F gather_2d_r4.F gather_2d_r8.F gather_2d_wh_r4.F gather_2d_wh_r8.F gather_vec_r4.F gather_vec_r8.F gather_xz.F gather_yz.F get_periodic_interval.F global_max.F global_sum.F global_sum_singlecpu.F global_sum_tile.F global_vec_sum.F gsum.F ini_communication_patterns.F ini_procs.F ini_threading_environment.F lef_zero.F main.F master_cpu_io.F master_cpu_thread.F mds_byteswapi4.F mds_byteswapr4.F mds_byteswapr8.F mdsfindunit.F mds_flush.F mds_reclen.F memsync.F nml_change_syntax.F nml_set_terminator.F open_copy_data_file.F print.F reset_halo.F scatter_2d_r4.F scatter_2d_r8.F scatter_2d_wh_r4.F scatter_2d_wh_r8.F scatter_vec_r4.F scatter_vec_r8.F scatter_xz.F scatter_yz.F stop_if_error.F timers.F utils.F write_utils.F adams_bashforth2.F adams_bashforth3.F add_walls2masks.F apply_forcing.F calc_3d_diffusivity.F calc_adv_flow.F calc_div_ghat.F calc_eddy_stress.F calc_grad_phi_fv.F calc_grad_phi_hyd.F calc_grad_phi_surf.F calc_grid_angles.F calc_gw.F calc_ivdc.F calc_oce_mxlayer.F calc_phi_hyd.F calc_r_star.F calc_surf_dr.F calc_viscosity.F calc_wsurf_tr.F cg2d_ex0.F cg2d.F cg2d_nsa.F cg2d_sr.F cg3d_ex0.F cg3d.F check_pickup.F config_check.F config_summary.F convective_adjustment.F convective_adjustment_ini.F convectively_mixtracer.F convective_weights.F correction_step.F cycle_ab_tracer.F cycle_tracer.F diags_oceanic_surf_flux.F diags_phi_hyd.F diags_phi_rlow.F diags_rho.F diags_sound_speed.F do_atmospheric_phys.F do_fields_blocking_exchanges.F do_stagger_fields_exchanges.F do_statevars_diags.F do_statevars_tave.F do_the_model_io.F do_write_pickup.F dynamics.F external_fields_load.F external_forcing.F external_forcing_surf.F find_alpha.F find_hyd_press_1d.F find_rho.F forcing_surf_relax.F forward_step.F freesurf_rescale_g.F freeze_surface.F grad_sigma.F gsw_teos10.F impldiff.F ini_cartesian_grid.F ini_cg2d.F ini_cg3d.F ini_cori.F ini_curvilinear_grid.F ini_cylinder_grid.F ini_depths.F ini_dynvars.F ini_eos.F ini_ffields.F ini_fields.F ini_forcing.F ini_global_domain.F ini_grid.F ini_linear_phisurf.F ini_local_grid.F ini_masks_etc.F ini_mixing.F ini_mnc_vars.F ini_model_io.F ini_nh_fields.F ini_nh_vars.F ini_nlfs_vars.F ini_parms.F ini_p_ground.F ini_pressure.F ini_psurf.F ini_salt.F ini_sigma_hfac.F ini_spherical_polar_grid.F ini_theta.F initialise_fixed.F initialise_varia.F ini_vel.F ini_vertical_grid.F integrate_for_w.F integr_continuity.F load_fields_driver.F load_grid_spacing.F load_ref_files.F main_do_loop.F momentum_correction_step.F packages_boot.F packages_check.F packages_error_msg.F packages_init_fixed.F packages_init_variables.F packages_print_msg.F packages_readparms.F packages_unused_msg.F packages_write_pickup.F plot_field.F port_rand.F post_cg3d.F pre_cg3d.F pressure_for_eos.F read_pickup.F remove_mean.F reset_nlfs_vars.F rotate_spherical_polar_grid.F rotate_uv2en.F salt_integrate.F seawater.F set_defaults.F set_grid_factors.F set_parms.F set_ref_state.F solve_for_pressure.F solve_pentadiagonal.F solve_tridiagonal.F solve_uv_tridiago.F state_summary.F swfrac.F taueddy_init_varia.F taueddy_tendency_apply.F temp_integrate.F the_main_loop.F the_model_main.F thermodynamics.F timestep.F timestep_tracer.F timestep_wvel.F tracers_correction_step.F tracers_iigw_correction.F turnoff_model_io.F update_cg2d.F update_etah.F update_etaws.F update_masks_etc.F update_r_star.F update_sigma.F update_surf_dr.F write_grid.F write_pickup.F write_state.F
Appending dependencies to Makefile
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/f90mkdepend &gt;&gt; Makefile
WARNING: f90mkdepend: no source file found for module a
WARNING: f90mkdepend: no source file found for module `petscdtbinomial()`
WARNING: f90mkdepend: no source file found for module `petsctabulationgetdata()`
WARNING: f90mkdepend: no source file found for module `seterra()`
WARNING: f90mkdepend: no source file found for module `seterra()`
WARNING: f90mkdepend: no source file found for module `petsccalla()`.
WARNING: f90mkdepend: no source file found for module `chkmema`
WARNING: f90mkdepend: no source file found for module `petscstackpushexternal()`
WARNING: f90mkdepend: no source file found for module `petscfunctionbeginuser`
WARNING: f90mkdepend: no source file found for module `kspsettype()`
WARNING: f90mkdepend: no source file found for module `matsettype()`
WARNING: f90mkdepend: no source file found for module this
WARNING: f90mkdepend: no source file found for module `petscobjectoptionsbegin()`
WARNING: f90mkdepend: no source file found for module `pcsettype()`
WARNING: f90mkdepend: no source file found for module `mpiu_sf_node`
WARNING: f90mkdepend: no source file found for module `snessettype()`
WARNING: f90mkdepend: no source file found for module `sneslinesearchsettype()`
WARNING: f90mkdepend: no source file found for module `petscfree()`
WARNING: f90mkdepend: no source file found for module `petsc_null_integer`
WARNING: f90mkdepend: no source file found for module `petsc_unlimited_integer`
WARNING: f90mkdepend: no source file found for module `petsc_decide_integer`
WARNING: f90mkdepend: no source file found for module `petsc_determine_integer`
WARNING: f90mkdepend: no source file found for module `petsc_decide`
WARNING: f90mkdepend: no source file found for module `petsc_current_integer`
WARNING: f90mkdepend: no source file found for module of
WARNING: f90mkdepend: no source file found for module `petscint64mult()`
WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()`
WARNING: f90mkdepend: no source file found for module `petscintmulterror()`
WARNING: f90mkdepend: no source file found for module `petscint64mult()`
WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()`
WARNING: f90mkdepend: no source file found for module `petscintmulterror()`
WARNING: f90mkdepend: no source file found for module `petscint64mult()`
WARNING: f90mkdepend: no source file found for module `petscrealintmulttruncate()`
WARNING: f90mkdepend: no source file found for module `petscintmulterror()`
WARNING: f90mkdepend: no source file found for module `petscint64mult()`
WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()`
WARNING: f90mkdepend: no source file found for module `petscint64mult()`
WARNING: f90mkdepend: no source file found for module `petscintmulttruncate()`
WARNING: f90mkdepend: no source file found for module the
WARNING: f90mkdepend: no source file found for module `petscclassidregister()`
WARNING: f90mkdepend: no source file found for module `petsccount_fmt`
WARNING: f90mkdepend: no source file found for module of
WARNING: f90mkdepend: no source file found for module `tssettype()`
WARNING: f90mkdepend: no source file found for module `petscviewerfilesetmode()`
rm -f makedepend.out

[41;37m   step #6: RunUncoupledMITgcm   [0m

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[41;37m   step #7: CreateMesh   [0m

Info: creating coordinates in polar stereographic (Std Latitude: 71S Meridian: 0)
saving model as: Models/IceOcean.CreateMesh

[41;37m   step #8: MeshGeometry   [0m

saving model as: Models/IceOcean.MeshGeometry

[41;37m   step #9: ParameterizeIce   [0m

saving model as: Models/IceOcean.ParameterizeIce

[41;37m   step #10: RunUncoupledISSM   [0m

checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster
/home/jenkins/workspace/Debian_Linux-Ice-Ocean//etc/environment.sh: line 329: syntax error in conditional expression
loading results from cluster
cp: cannot stat '/home/jenkins/workspace/Debian_Linux-Ice-Ocean//execution/test4001-09-03-2025-10-46-10-2177023//test4001.outlog': No such file or directory
cp: cannot stat '/home/jenkins/workspace/Debian_Linux-Ice-Ocean//execution/test4001-09-03-2025-10-46-10-2177023//test4001.errlog': No such file or directory
cp: cannot stat '/home/jenkins/workspace/Debian_Linux-Ice-Ocean//execution/test4001-09-03-2025-10-46-10-2177023//test4001.outbin': No such file or directory
Error using loadresultsfromdisk

=========================================================================
   Binary file test4001.outbin not found

   This typically results from an error encountered during the simulation
   Please check for error messages above or in the outlog
=========================================================================


Error in loadresultsfromcluster (line 50)
md=loadresultsfromdisk(md,[md.miscellaneous.name '.outbin']);

Error in solve (line 180)
	md=loadresultsfromcluster(md);

Error in test4001 (line 556)
    md=solve(md,'Transient');

Error in run (line 99)
evalin('caller', strcat(script, ';'));

Error in runme (line 156)
		run(['test' num2str(id)]);

Error in matlab_run2 (line 3)
			runme('benchmark','all','id',[4001],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 4001 test name: IceOcean field: N/A
+++ exit code: 0
+++ error: 1
----------MATLAB exited in error!----------

                            &lt; M A T L A B (R) &gt;
                  Copyright 1984-2023 The MathWorks, Inc.
             R2023b Update 8 (23.2.0.2599560) 64-bit (glnxa64)
                               April 29, 2024

 
To get started, type doc.
For product information, visit www.mathworks.com.
 

  ISSM development path correctly loaded

MATLABEXITEDCORRECTLY

                            &lt; M A T L A B (R) &gt;
                  Copyright 1984-2023 The MathWorks, Inc.
             R2023b Update 8 (23.2.0.2599560) 64-bit (glnxa64)
                               April 29, 2024

 
To get started, type doc.
For product information, visit www.mathworks.com.
 

  ISSM development path correctly loaded

----------------starting:4001-----------------------

[41;37m   step #1: Parameters   [0m

saving data in: Models/IceOcean.Parameters

[41;37m   step #2: Bathymetry   [0m

saving data in: Models/IceOcean.Bathymetry

[41;37m   step #3: IceSheetGeometry   [0m

saving data in: Models/IceOcean.IceSheetGeometry

[41;37m   step #4: GetMITgcm   [0m

--2025-09-03 10:43:07--  <a href='https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz'>https://github.com/MITgcm/MITgcm/archive/refs/tags/checkpoint68i.tar.gz</a>
Resolving github.com (github.com)... 140.82.116.3
Connecting to github.com (github.com)|140.82.116.3|:443... connected.
HTTP request sent, awaiting response... 302 Found
Location: <a href='https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i'>https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i</a> [following]
--2025-09-03 10:43:08--  <a href='https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i'>https://codeload.github.com/MITgcm/MITgcm/tar.gz/refs/tags/checkpoint68i</a>
Resolving codeload.github.com (codeload.github.com)... 140.82.116.9
Connecting to codeload.github.com (codeload.github.com)|140.82.116.9|:443... connected.
HTTP request sent, awaiting response... 200 OK
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MITgcm-checkpoint68i/eesupp/inc/CPP_EEMACROS.h
MITgcm-checkpoint68i/eesupp/inc/CPP_EEOPTIONS.h
MITgcm-checkpoint68i/eesupp/inc/CUMULSUM.h
MITgcm-checkpoint68i/eesupp/inc/DEF_IN_MAKEFILE.h
MITgcm-checkpoint68i/eesupp/inc/EEBUFF_SCPU.h
MITgcm-checkpoint68i/eesupp/inc/EEPARAMS.h
MITgcm-checkpoint68i/eesupp/inc/EESUPPORT.h
MITgcm-checkpoint68i/eesupp/inc/EXCH.h
MITgcm-checkpoint68i/eesupp/inc/GLOBAL_MAX.h
MITgcm-checkpoint68i/eesupp/inc/GLOBAL_SUM.h
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MITgcm-checkpoint68i/model/inc/RESTART.h
MITgcm-checkpoint68i/model/inc/SET_GRID.h
MITgcm-checkpoint68i/model/inc/SIZE.h
MITgcm-checkpoint68i/model/inc/SOLVE_FOR_PRESSURE.h
MITgcm-checkpoint68i/model/inc/SOLVE_FOR_PRESSURE3D.h
MITgcm-checkpoint68i/model/inc/SURFACE.h
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MITgcm-checkpoint68i/model/inc/THE_MODEL_COMMON_BLOCKS.h
MITgcm-checkpoint68i/model/inc/XC_MACROS.h
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MITgcm-checkpoint68i/optim/
MITgcm-checkpoint68i/optim/Makefile
MITgcm-checkpoint68i/optim/Makefile_macosx
MITgcm-checkpoint68i/optim/README.md
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MITgcm-checkpoint68i/optim/data.ecco
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MITgcm-checkpoint68i/pkg/
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MITgcm-checkpoint68i/pkg/admtlm/admtlm_driver.F
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MITgcm-checkpoint68i/pkg/aim_v23/
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MITgcm-checkpoint68i/pkg/aim_v23/com_lsccon.h
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MITgcm-checkpoint68i/pkg/aim_v23/com_sflcon.h
MITgcm-checkpoint68i/pkg/aim_v23/com_vdicon.h
MITgcm-checkpoint68i/pkg/aim_v23/phy_const.h
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MITgcm-checkpoint68i/pkg/atm_compon_interf/cpl_write_pickup.F
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MITgcm-checkpoint68i/pkg/atm_ocn_coupler/ATMVARS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPLIDS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPL_MAP2GRIDS.h
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MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPP_EEOPTIONS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/CPP_OPTIONS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/NOTES
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MITgcm-checkpoint68i/pkg/atm_ocn_coupler/OCNVARS.h
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/README
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MITgcm-checkpoint68i/pkg/atm_ocn_coupler/mds_byteswap.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/ocn_to_atm_mapxyr8.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/set_runoffmap.F
MITgcm-checkpoint68i/pkg/atm_ocn_coupler/setdir.c
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MITgcm-checkpoint68i/pkg/atm_phys/ATM_PHYS_PARAMS.h
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MITgcm-checkpoint68i/pkg/atm_phys/old_doc/
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MITgcm-checkpoint68i/pkg/atm_phys/old_doc/diffusivity.tech.ps
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MITgcm-checkpoint68i/pkg/atm_phys/old_doc/monin_obukhov.html
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MITgcm-checkpoint68i/pkg/atm_phys/radiation_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/shallow_conv_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/simple_sat_vapor_pres_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/surface_flux_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/vert_diff_mod.F90
MITgcm-checkpoint68i/pkg/atm_phys/vert_turb_driver_mod.F90
MITgcm-checkpoint68i/pkg/autodiff/
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_MYFIELDS.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_OPTIONS.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_PARAMS.h
MITgcm-checkpoint68i/pkg/autodiff/AUTODIFF_STORE.h
MITgcm-checkpoint68i/pkg/autodiff/ECCO_CPPOPTIONS.h
MITgcm-checkpoint68i/pkg/autodiff/README
MITgcm-checkpoint68i/pkg/autodiff/active_file.F
MITgcm-checkpoint68i/pkg/autodiff/active_file.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_ad.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_control.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_control.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_control_slice.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_g.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen_ad.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_gen_g.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc.flow
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc_ad.F
MITgcm-checkpoint68i/pkg/autodiff/active_file_loc_g.F
MITgcm-checkpoint68i/pkg/autodiff/adautodiff_whtapeio_sync.F
MITgcm-checkpoint68i/pkg/autodiff/adcommon.h
MITgcm-checkpoint68i/pkg/autodiff/addamp_adj.F
MITgcm-checkpoint68i/pkg/autodiff/addummy_for_etan.F
MITgcm-checkpoint68i/pkg/autodiff/addummy_in_dynamics.F
MITgcm-checkpoint68i/pkg/autodiff/addummy_in_stepping.F
MITgcm-checkpoint68i/pkg/autodiff/adopen_adclose.F
MITgcm-checkpoint68i/pkg/autodiff/adread_adwrite.F
MITgcm-checkpoint68i/pkg/autodiff/adread_adwrite_i.F
MITgcm-checkpoint68i/pkg/autodiff/adzero_adj.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_ad_diff.list
MITgcm-checkpoint68i/pkg/autodiff/autodiff_check.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_findunit.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode.flow
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set_ad.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_set_g.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset_ad.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_inadmode_unset_g.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_ini_model_io.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_init_varia.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_readparms.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_restore.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_store.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_whtapeio_sync.F
MITgcm-checkpoint68i/pkg/autodiff/autodiff_whtapeio_sync.flow
MITgcm-checkpoint68i/pkg/autodiff/cg2d.flow
MITgcm-checkpoint68i/pkg/autodiff/cg2d_mad.F
MITgcm-checkpoint68i/pkg/autodiff/check_lev1_dir_forcing.h
MITgcm-checkpoint68i/pkg/autodiff/check_lev1_dir_ocephys.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint.flow
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev1_directives.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev1_template.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev2_directives.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev3_directives.h
MITgcm-checkpoint68i/pkg/autodiff/checkpoint_lev4_directives.h
MITgcm-checkpoint68i/pkg/autodiff/common.flow
MITgcm-checkpoint68i/pkg/autodiff/copy_ad_uv_outp.F
MITgcm-checkpoint68i/pkg/autodiff/copy_advar_outp.F
MITgcm-checkpoint68i/pkg/autodiff/damp_adj.F
MITgcm-checkpoint68i/pkg/autodiff/damp_adj.flow
MITgcm-checkpoint68i/pkg/autodiff/dummy_for_etan.F
MITgcm-checkpoint68i/pkg/autodiff/dummy_for_etan.flow
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_dynamics.F
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_dynamics.flow
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_stepping.F
MITgcm-checkpoint68i/pkg/autodiff/dummy_in_stepping.flow
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xy.F
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xy_uv.F
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xyz.F
MITgcm-checkpoint68i/pkg/autodiff/dump_adj_xyz_uv.F
MITgcm-checkpoint68i/pkg/autodiff/g_common.h
MITgcm-checkpoint68i/pkg/autodiff/g_dummy_for_etan.F
MITgcm-checkpoint68i/pkg/autodiff/g_dummy_in_dynamics.F
MITgcm-checkpoint68i/pkg/autodiff/g_dummy_in_stepping.F
MITgcm-checkpoint68i/pkg/autodiff/global_max_ad.F
MITgcm-checkpoint68i/pkg/autodiff/global_max_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/global_sum_ad.F
MITgcm-checkpoint68i/pkg/autodiff/global_sum_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/global_sum_tile_ad.F
MITgcm-checkpoint68i/pkg/autodiff/initialisation.flow
MITgcm-checkpoint68i/pkg/autodiff/model_ad.flow
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction.F
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction.flow
MITgcm-checkpoint68i/pkg/autodiff/myactivefunction_ad.F
MITgcm-checkpoint68i/pkg/autodiff/system.flow
MITgcm-checkpoint68i/pkg/autodiff/tamc.h
MITgcm-checkpoint68i/pkg/autodiff/zero_adj.F
MITgcm-checkpoint68i/pkg/autodiff/zero_adj.flow
MITgcm-checkpoint68i/pkg/bbl/
MITgcm-checkpoint68i/pkg/bbl/BBL.h
MITgcm-checkpoint68i/pkg/bbl/BBL_OPTIONS.h
MITgcm-checkpoint68i/pkg/bbl/bbl_ad.flow
MITgcm-checkpoint68i/pkg/bbl/bbl_ad_diff.list
MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rho.F
MITgcm-checkpoint68i/pkg/bbl/bbl_calc_rhs.F
MITgcm-checkpoint68i/pkg/bbl/bbl_check.F
MITgcm-checkpoint68i/pkg/bbl/bbl_description.tex
MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/bbl/bbl_diagnostics_state.F
MITgcm-checkpoint68i/pkg/bbl/bbl_init_fixed.F
MITgcm-checkpoint68i/pkg/bbl/bbl_init_varia.F
MITgcm-checkpoint68i/pkg/bbl/bbl_read_pickup.F
MITgcm-checkpoint68i/pkg/bbl/bbl_readparms.F
MITgcm-checkpoint68i/pkg/bbl/bbl_tendency_apply.F
MITgcm-checkpoint68i/pkg/bbl/bbl_write_pickup.F
MITgcm-checkpoint68i/pkg/bling/
MITgcm-checkpoint68i/pkg/bling/BLING_LOAD.h
MITgcm-checkpoint68i/pkg/bling/BLING_OPTIONS.h
MITgcm-checkpoint68i/pkg/bling/BLING_VARS.h
MITgcm-checkpoint68i/pkg/bling/CHANGES_TO_BLING.txt
MITgcm-checkpoint68i/pkg/bling/bling_ad.flow
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/bling/bling_ad_diff.list
MITgcm-checkpoint68i/pkg/bling/bling_airseaflux.F
MITgcm-checkpoint68i/pkg/bling/bling_bio.F
MITgcm-checkpoint68i/pkg/bling/bling_bio_nitrogen.F
MITgcm-checkpoint68i/pkg/bling/bling_carbon_chem.F
MITgcm-checkpoint68i/pkg/bling/bling_carbonate_init.F
MITgcm-checkpoint68i/pkg/bling/bling_carbonate_sys.F
MITgcm-checkpoint68i/pkg/bling/bling_description.txt
MITgcm-checkpoint68i/pkg/bling/bling_diagnostics_init.F
MITgcm-checkpoint68i/pkg/bling/bling_fields_load.F
MITgcm-checkpoint68i/pkg/bling/bling_ini_forcing.F
MITgcm-checkpoint68i/pkg/bling/bling_init_fixed.F
MITgcm-checkpoint68i/pkg/bling/bling_init_varia.F
MITgcm-checkpoint68i/pkg/bling/bling_light.F
MITgcm-checkpoint68i/pkg/bling/bling_main.F
MITgcm-checkpoint68i/pkg/bling/bling_min_val.F
MITgcm-checkpoint68i/pkg/bling/bling_mixedlayer.F
MITgcm-checkpoint68i/pkg/bling/bling_read_pickup.F
MITgcm-checkpoint68i/pkg/bling/bling_readparms.F
MITgcm-checkpoint68i/pkg/bling/bling_sgs.F
MITgcm-checkpoint68i/pkg/bling/bling_solvesaphe.F
MITgcm-checkpoint68i/pkg/bling/bling_tr_register.F
MITgcm-checkpoint68i/pkg/bling/bling_write_pickup.F
MITgcm-checkpoint68i/pkg/bulk_force/
MITgcm-checkpoint68i/pkg/bulk_force/BULKF.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_CONSERV.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_INT.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_PARAMS.h
MITgcm-checkpoint68i/pkg/bulk_force/BULKF_TAVE.h
MITgcm-checkpoint68i/pkg/bulk_force/BULK_FORCE_OPTIONS.h
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_ave.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_fields_load.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_flux_adjust.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_forcing.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_aim.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lanl.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_formula_lay.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_init_varia.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_output.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_readparms.F
MITgcm-checkpoint68i/pkg/bulk_force/bulkf_sh2rh_aim.F
MITgcm-checkpoint68i/pkg/cal/
MITgcm-checkpoint68i/pkg/cal/CAL_OPTIONS.h
MITgcm-checkpoint68i/pkg/cal/cal.h
MITgcm-checkpoint68i/pkg/cal/cal_ad_diff.list
MITgcm-checkpoint68i/pkg/cal/cal_addtime.F
MITgcm-checkpoint68i/pkg/cal/cal_checkdate.F
MITgcm-checkpoint68i/pkg/cal/cal_compdates.F
MITgcm-checkpoint68i/pkg/cal/cal_convdate.F
MITgcm-checkpoint68i/pkg/cal/cal_copydate.F
MITgcm-checkpoint68i/pkg/cal/cal_daysformonth.F
MITgcm-checkpoint68i/pkg/cal/cal_dayspermonth.F
MITgcm-checkpoint68i/pkg/cal/cal_description.tex
MITgcm-checkpoint68i/pkg/cal/cal_fulldate.F
MITgcm-checkpoint68i/pkg/cal/cal_getdate.F
MITgcm-checkpoint68i/pkg/cal/cal_getmonthsrec.F
MITgcm-checkpoint68i/pkg/cal/cal_init_fixed.F
MITgcm-checkpoint68i/pkg/cal/cal_intdays.F
MITgcm-checkpoint68i/pkg/cal/cal_intmonths.F
MITgcm-checkpoint68i/pkg/cal/cal_intyears.F
MITgcm-checkpoint68i/pkg/cal/cal_isleap.F
MITgcm-checkpoint68i/pkg/cal/cal_monthsforyear.F
MITgcm-checkpoint68i/pkg/cal/cal_monthsperyear.F
MITgcm-checkpoint68i/pkg/cal/cal_numints.F
MITgcm-checkpoint68i/pkg/cal/cal_printdate.F
MITgcm-checkpoint68i/pkg/cal/cal_printerror.F
MITgcm-checkpoint68i/pkg/cal/cal_readparms.F
MITgcm-checkpoint68i/pkg/cal/cal_set.F
MITgcm-checkpoint68i/pkg/cal/cal_stepsforday.F
MITgcm-checkpoint68i/pkg/cal/cal_stepsperday.F
MITgcm-checkpoint68i/pkg/cal/cal_subdates.F
MITgcm-checkpoint68i/pkg/cal/cal_summary.F
MITgcm-checkpoint68i/pkg/cal/cal_time2dump.F
MITgcm-checkpoint68i/pkg/cal/cal_timeinterval.F
MITgcm-checkpoint68i/pkg/cal/cal_timepassed.F
MITgcm-checkpoint68i/pkg/cal/cal_timestamp.F
MITgcm-checkpoint68i/pkg/cal/cal_toseconds.F
MITgcm-checkpoint68i/pkg/cal/cal_weekday.F
MITgcm-checkpoint68i/pkg/cd_code/
MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_OPTIONS.h
MITgcm-checkpoint68i/pkg/cd_code/CD_CODE_VARS.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad.flow
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ad_diff.list
MITgcm-checkpoint68i/pkg/cd_code/cd_code_ini_vars.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_init_fixed.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_read_pickup.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_scheme.F
MITgcm-checkpoint68i/pkg/cd_code/cd_code_write_pickup.F
MITgcm-checkpoint68i/pkg/cfc/
MITgcm-checkpoint68i/pkg/cfc/CFC.h
MITgcm-checkpoint68i/pkg/cfc/CFC_ATMOS.h
MITgcm-checkpoint68i/pkg/cfc/CFC_SIZE.h
MITgcm-checkpoint68i/pkg/cfc/cfc11_forcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc11_surfforcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc12_forcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc12_surfforcing.F
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/cfc/cfc_ad_diff.list
MITgcm-checkpoint68i/pkg/cfc/cfc_atmos.F
MITgcm-checkpoint68i/pkg/cfc/cfc_check.F
MITgcm-checkpoint68i/pkg/cfc/cfc_fields_load.F
MITgcm-checkpoint68i/pkg/cfc/cfc_param.F
MITgcm-checkpoint68i/pkg/cfc/cfc_readparms.F
MITgcm-checkpoint68i/pkg/cfc/cfc_tr_register.F
MITgcm-checkpoint68i/pkg/cheapaml/
MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML.h
MITgcm-checkpoint68i/pkg/cheapaml/CHEAPAML_OPTIONS.h
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_calc_rhs.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_coare3_flux.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_copy_edges.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_diagnostics_init.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_fields_load.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_fixed.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_init_varia.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_lanl_flux.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_read_pickup.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_readparms.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_seaice.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_timestep.F
MITgcm-checkpoint68i/pkg/cheapaml/cheapaml_write_pickup.F
MITgcm-checkpoint68i/pkg/chronos/
MITgcm-checkpoint68i/pkg/chronos/chronos.F
MITgcm-checkpoint68i/pkg/chronos/chronos.h
MITgcm-checkpoint68i/pkg/compon_communic/
MITgcm-checkpoint68i/pkg/compon_communic/CPLR_SIG.h
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/comprecv_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/compsend_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/couprecv_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_i4vec.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r4tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8.F
MITgcm-checkpoint68i/pkg/compon_communic/coupsend_r8tiles.F
MITgcm-checkpoint68i/pkg/compon_communic/generate_tag.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_init.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcomponent_tile_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_init.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcoupler_tile_register.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_all_check.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2dbl.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2int.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_char2real.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_dbl2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init1.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2a.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_init2b.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_initcomp.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_int2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_match_comp.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_real2char.F
MITgcm-checkpoint68i/pkg/compon_communic/mitcplr_sortranks.F
MITgcm-checkpoint68i/pkg/cost/
MITgcm-checkpoint68i/pkg/cost/COST_OPTIONS.h
MITgcm-checkpoint68i/pkg/cost/adcost.h
MITgcm-checkpoint68i/pkg/cost/cost.h
MITgcm-checkpoint68i/pkg/cost/cost_accumulate_mean.F
MITgcm-checkpoint68i/pkg/cost/cost_ad.flow
MITgcm-checkpoint68i/pkg/cost/cost_ad_diff.list
MITgcm-checkpoint68i/pkg/cost/cost_atlantic_heat.F
MITgcm-checkpoint68i/pkg/cost/cost_check.F
MITgcm-checkpoint68i/pkg/cost/cost_dependent_init.F
MITgcm-checkpoint68i/pkg/cost/cost_depth.F
MITgcm-checkpoint68i/pkg/cost/cost_final.F
MITgcm-checkpoint68i/pkg/cost/cost_final_restore.F
MITgcm-checkpoint68i/pkg/cost/cost_final_store.F
MITgcm-checkpoint68i/pkg/cost/cost_init_varia.F
MITgcm-checkpoint68i/pkg/cost/cost_readparms.F
MITgcm-checkpoint68i/pkg/cost/cost_state_final.F
MITgcm-checkpoint68i/pkg/cost/cost_test.F
MITgcm-checkpoint68i/pkg/cost/cost_tile.F
MITgcm-checkpoint68i/pkg/cost/cost_tracer.F
MITgcm-checkpoint68i/pkg/cost/cost_vector.F
MITgcm-checkpoint68i/pkg/cost/g_cost.h
MITgcm-checkpoint68i/pkg/ctrl/
MITgcm-checkpoint68i/pkg/ctrl/CTRL_FIELDS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_GENARR.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_OBCS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_OPTIONS.h
MITgcm-checkpoint68i/pkg/ctrl/CTRL_SIZE.h
MITgcm-checkpoint68i/pkg/ctrl/adctrl_bound.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_ad_diff.list
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound.flow
MITgcm-checkpoint68i/pkg/ctrl/ctrl_bound_tl.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_check.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_driver.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_cost_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_depth_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_description.tex
MITgcm-checkpoint68i/pkg/ctrl/ctrl_dummy.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_gen_rec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_get_mask.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcse.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsn.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcss.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getobcsw.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_getrec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_hfacc_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_ctrlvar.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_obcs_variables.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_rec.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_variables.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_init_wet.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_local_params.h
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_forcing.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_genarr.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_gentim2d.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_ecco.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gen.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_genarr.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_map_ini_gentim2d.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_mask_set_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_pack.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_readparms.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_fname.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_globfld_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_pack_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xy.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xyz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_xz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_set_unpack_yz.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_smooth.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_summary.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_swapffields.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_toolbox.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_unpack.F
MITgcm-checkpoint68i/pkg/ctrl/ctrl_weights.h
MITgcm-checkpoint68i/pkg/ctrl/optim.h
MITgcm-checkpoint68i/pkg/ctrl/optim_readparms.F
MITgcm-checkpoint68i/pkg/debug/
MITgcm-checkpoint68i/pkg/debug/DEBUG_OPTIONS.h
MITgcm-checkpoint68i/pkg/debug/chksum_tiled.F
MITgcm-checkpoint68i/pkg/debug/debug_ad.flow
MITgcm-checkpoint68i/pkg/debug/debug_call.F
MITgcm-checkpoint68i/pkg/debug/debug_cs_corner_uv.F
MITgcm-checkpoint68i/pkg/debug/debug_enter.F
MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rl.F
MITgcm-checkpoint68i/pkg/debug/debug_fld_stats_rs.F
MITgcm-checkpoint68i/pkg/debug/debug_leave.F
MITgcm-checkpoint68i/pkg/debug/debug_msg.F
MITgcm-checkpoint68i/pkg/debug/debug_stats_rl.F
MITgcm-checkpoint68i/pkg/debug/debug_stats_rs.F
MITgcm-checkpoint68i/pkg/debug/fill_in_corners_rl.F
MITgcm-checkpoint68i/pkg/debug/write_fullarray_rl.F
MITgcm-checkpoint68i/pkg/debug/write_fullarray_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_CALC.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGNOSTICS_SIZE.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAGSTATS_REGIONS.h
MITgcm-checkpoint68i/pkg/diagnostics/DIAG_OPTIONS.h
MITgcm-checkpoint68i/pkg/diagnostics/diag_calc_psivel.F
MITgcm-checkpoint68i/pkg/diagnostics/diag_cg2d.F
MITgcm-checkpoint68i/pkg/diagnostics/diag_vegtile_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad.flow
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ad_diff.list
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_addtolist.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_calc_phivel.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_check.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_clear.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_field.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fill_state.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_fract_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_ini_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_early.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_fixed.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_init_varia.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_p2p.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_interp_vert.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_is_on.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_list_check.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_main_init.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_mnc_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_read_pickup.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_readparms.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_scale_fill_rs.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_levels.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_set_pointers.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_setdiag.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_status_error.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_sum_levels.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_summary.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_switch_onoff.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_utils.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_adj.F
MITgcm-checkpoint68i/pkg/diagnostics/diagnostics_write_pickup.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ascii_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_clear.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_close_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_fill.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_global.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_ini_io.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_local.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_mnc_out.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_others_calc.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_output.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_pointers.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_set_regions.F
MITgcm-checkpoint68i/pkg/diagnostics/diagstats_setdiag.F
MITgcm-checkpoint68i/pkg/dic/
MITgcm-checkpoint68i/pkg/dic/DIC_ATMOS.h
MITgcm-checkpoint68i/pkg/dic/DIC_COST.h
MITgcm-checkpoint68i/pkg/dic/DIC_CTRL.h
MITgcm-checkpoint68i/pkg/dic/DIC_LOAD.h
MITgcm-checkpoint68i/pkg/dic/DIC_OPTIONS.h
MITgcm-checkpoint68i/pkg/dic/DIC_VARS.h
MITgcm-checkpoint68i/pkg/dic/alk_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/bio_export.F
MITgcm-checkpoint68i/pkg/dic/calcite_saturation.F
MITgcm-checkpoint68i/pkg/dic/car_flux.F
MITgcm-checkpoint68i/pkg/dic/car_flux_omega_top.F
MITgcm-checkpoint68i/pkg/dic/carbon_chem.F
MITgcm-checkpoint68i/pkg/dic/dic_ad.flow
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/dic/dic_ad_diff.list
MITgcm-checkpoint68i/pkg/dic/dic_atmos.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_diags.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_forcing.F
MITgcm-checkpoint68i/pkg/dic/dic_biotic_init.F
MITgcm-checkpoint68i/pkg/dic/dic_cost.F
MITgcm-checkpoint68i/pkg/dic/dic_diagnostics_init.F
MITgcm-checkpoint68i/pkg/dic/dic_fields_load.F
MITgcm-checkpoint68i/pkg/dic/dic_fields_update.F
MITgcm-checkpoint68i/pkg/dic/dic_ini_atmos.F
MITgcm-checkpoint68i/pkg/dic/dic_ini_forcing.F
MITgcm-checkpoint68i/pkg/dic/dic_init_fixed.F
MITgcm-checkpoint68i/pkg/dic/dic_init_varia.F
MITgcm-checkpoint68i/pkg/dic/dic_mnc_init.F
MITgcm-checkpoint68i/pkg/dic/dic_read_co2_pickup.F
MITgcm-checkpoint68i/pkg/dic/dic_read_pickup.F
MITgcm-checkpoint68i/pkg/dic/dic_readparms.F
MITgcm-checkpoint68i/pkg/dic/dic_set_control.F
MITgcm-checkpoint68i/pkg/dic/dic_solvesaphe.F
MITgcm-checkpoint68i/pkg/dic/dic_store_fluxco2.F
MITgcm-checkpoint68i/pkg/dic/dic_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/dic_surfforcing_init.F
MITgcm-checkpoint68i/pkg/dic/dic_tr_register.F
MITgcm-checkpoint68i/pkg/dic/dic_write_pickup.F
MITgcm-checkpoint68i/pkg/dic/fe_chem.F
MITgcm-checkpoint68i/pkg/dic/insol.F
MITgcm-checkpoint68i/pkg/dic/o2_surfforcing.F
MITgcm-checkpoint68i/pkg/dic/phos_flux.F
MITgcm-checkpoint68i/pkg/down_slope/
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_OPTIONS.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_PARAMS.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_SIZE.h
MITgcm-checkpoint68i/pkg/down_slope/DWNSLP_VARS.h
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_ad_diff.list
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_apply.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_flow.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_calc_rho.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_diagnostics_init.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_fixed.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_init_varia.F
MITgcm-checkpoint68i/pkg/down_slope/dwnslp_readparms.F
MITgcm-checkpoint68i/pkg/ebm/
MITgcm-checkpoint68i/pkg/ebm/EBM.h
MITgcm-checkpoint68i/pkg/ebm/EBM_OPTIONS.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ebm/ebm_ad_diff.list
MITgcm-checkpoint68i/pkg/ebm/ebm_area_t.F
MITgcm-checkpoint68i/pkg/ebm/ebm_atmosphere.F
MITgcm-checkpoint68i/pkg/ebm/ebm_driver.F
MITgcm-checkpoint68i/pkg/ebm/ebm_ini_vars.F
MITgcm-checkpoint68i/pkg/ebm/ebm_load_climatology.F
MITgcm-checkpoint68i/pkg/ebm/ebm_readparms.F
MITgcm-checkpoint68i/pkg/ebm/ebm_wind_perturb.F
MITgcm-checkpoint68i/pkg/ebm/ebm_zonalmean.F
MITgcm-checkpoint68i/pkg/ecco/
MITgcm-checkpoint68i/pkg/ecco/ECCO.h
MITgcm-checkpoint68i/pkg/ecco/ECCO_OPTIONS.h
MITgcm-checkpoint68i/pkg/ecco/ECCO_SIZE.h
MITgcm-checkpoint68i/pkg/ecco/cost_averagesfields.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesflags.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesgeneric.F
MITgcm-checkpoint68i/pkg/ecco/cost_averagesinit.F
MITgcm-checkpoint68i/pkg/ecco/cost_bp_read.F
MITgcm-checkpoint68i/pkg/ecco/cost_forcing.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencal.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_all.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_assignperiod.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_boxmean.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_bpv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_customize.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_glbmean.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_moc.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_seaicev4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sshv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_sstv4.F
MITgcm-checkpoint68i/pkg/ecco/cost_gencost_transp.F
MITgcm-checkpoint68i/pkg/ecco/cost_generic.F
MITgcm-checkpoint68i/pkg/ecco/cost_genread.F
MITgcm-checkpoint68i/pkg/ecco/cost_hyd.F
MITgcm-checkpoint68i/pkg/ecco/cost_internal_params.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcs.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcs_ageos.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcse.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsn.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcss.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsvol.F
MITgcm-checkpoint68i/pkg/ecco/cost_obcsw.F
MITgcm-checkpoint68i/pkg/ecco/cost_sla_read.F
MITgcm-checkpoint68i/pkg/ecco/cost_sla_read_yd.F
MITgcm-checkpoint68i/pkg/ecco/cost_ssh.F
MITgcm-checkpoint68i/pkg/ecco/ecco_ad.flow
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ecco/ecco_ad_diff.list
MITgcm-checkpoint68i/pkg/ecco/ecco_check.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost.h
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_driver.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_final.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_barfiles.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_fixed.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_init_varia.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_summary.F
MITgcm-checkpoint68i/pkg/ecco/ecco_cost_weights.F
MITgcm-checkpoint68i/pkg/ecco/ecco_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ecco/ecco_init_fixed.F
MITgcm-checkpoint68i/pkg/ecco/ecco_init_varia.F
MITgcm-checkpoint68i/pkg/ecco/ecco_local_params.h
MITgcm-checkpoint68i/pkg/ecco/ecco_phys.F
MITgcm-checkpoint68i/pkg/ecco/ecco_readparms.F
MITgcm-checkpoint68i/pkg/ecco/ecco_summary.F
MITgcm-checkpoint68i/pkg/ecco/ecco_toolbox.F
MITgcm-checkpoint68i/pkg/ecco/stergloh_output.F
MITgcm-checkpoint68i/pkg/embed_files/
MITgcm-checkpoint68i/pkg/embed_files/EMBED_FILES_OPTIONS.h
MITgcm-checkpoint68i/pkg/embed_files/README.txt
MITgcm-checkpoint68i/pkg/embed_files/decode_files.c
MITgcm-checkpoint68i/pkg/embed_files/embed_files_init.F
MITgcm-checkpoint68i/pkg/exch2/
MITgcm-checkpoint68i/pkg/exch2/Makefile
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_BUFFER.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_PARAMS.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_SIZE.h
MITgcm-checkpoint68i/pkg/exch2/W2_EXCH2_TOPOLOGY.h
MITgcm-checkpoint68i/pkg/exch2/W2_OPTIONS.h
MITgcm-checkpoint68i/pkg/exch2/exch2.flow
MITgcm-checkpoint68i/pkg/exch2/exch2_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_diff.list
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_get_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_ad_put_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_check_depths.F
MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_get_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_get_scal_bounds.F
MITgcm-checkpoint68i/pkg/exch2/exch2_get_uv_bounds.F
MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_put_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_recv_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx1_cube_ad.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube.template
MITgcm-checkpoint68i/pkg/exch2/exch2_rx2_cube_ad.template
MITgcm-checkpoint68i/pkg/exch2/exch2_s3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx1.template
MITgcm-checkpoint68i/pkg/exch2/exch2_send_rx2.template
MITgcm-checkpoint68i/pkg/exch2/exch2_sm_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_agrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_bgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_cgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_uv_dgrid_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/exch2_z_3d_rx.template
MITgcm-checkpoint68i/pkg/exch2/w2_cumulsum_z_tile.F
MITgcm-checkpoint68i/pkg/exch2/w2_e2setup.F
MITgcm-checkpoint68i/pkg/exch2/w2_eeboot.F
MITgcm-checkpoint68i/pkg/exch2/w2_map_procs.F
MITgcm-checkpoint68i/pkg/exch2/w2_print_comm_sequence.F
MITgcm-checkpoint68i/pkg/exch2/w2_print_e2setup.F
MITgcm-checkpoint68i/pkg/exch2/w2_readparms.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_cs6_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_f2f_index.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_gen_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_map_cumsum.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_map_tiles.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_myown_facets.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_single_facet.F
MITgcm-checkpoint68i/pkg/exch2/w2_set_tile2tiles.F
MITgcm-checkpoint68i/pkg/exf/
MITgcm-checkpoint68i/pkg/exf/EXF_CONSTANTS.h
MITgcm-checkpoint68i/pkg/exf/EXF_FIELDS.h
MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_PARAM.h
MITgcm-checkpoint68i/pkg/exf/EXF_INTERP_SIZE.h
MITgcm-checkpoint68i/pkg/exf/EXF_OPTIONS.h
MITgcm-checkpoint68i/pkg/exf/EXF_PARAM.h
MITgcm-checkpoint68i/pkg/exf/TODO.txt
MITgcm-checkpoint68i/pkg/exf/exf_ad.flow
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/exf/exf_ad_diff.list
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots.F
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots__g.F
MITgcm-checkpoint68i/pkg/exf/exf_adjoint_snapshots_ad.F
MITgcm-checkpoint68i/pkg/exf/exf_bulkformulae.F
MITgcm-checkpoint68i/pkg/exf/exf_check.F
MITgcm-checkpoint68i/pkg/exf/exf_check_range.F
MITgcm-checkpoint68i/pkg/exf/exf_description.tex
MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/exf/exf_diagnostics_init.F
MITgcm-checkpoint68i/pkg/exf/exf_filter_rl.F
MITgcm-checkpoint68i/pkg/exf/exf_getclim.F
MITgcm-checkpoint68i/pkg/exf/exf_getffield_start.F
MITgcm-checkpoint68i/pkg/exf/exf_getffieldrec.F
MITgcm-checkpoint68i/pkg/exf/exf_getffields.F
MITgcm-checkpoint68i/pkg/exf/exf_getfield_start.F
MITgcm-checkpoint68i/pkg/exf/exf_getforcing.F
MITgcm-checkpoint68i/pkg/exf/exf_getmonthsrec.F
MITgcm-checkpoint68i/pkg/exf/exf_getsurfacefluxes.F
MITgcm-checkpoint68i/pkg/exf/exf_getyearlyfieldname.F
MITgcm-checkpoint68i/pkg/exf/exf_init_fixed.F
MITgcm-checkpoint68i/pkg/exf/exf_init_fld.F
MITgcm-checkpoint68i/pkg/exf/exf_init_interp.F
MITgcm-checkpoint68i/pkg/exf/exf_init_varia.F
MITgcm-checkpoint68i/pkg/exf/exf_interp.F
MITgcm-checkpoint68i/pkg/exf/exf_interp_read.F
MITgcm-checkpoint68i/pkg/exf/exf_interp_uv.F
MITgcm-checkpoint68i/pkg/exf/exf_interpolate.F
MITgcm-checkpoint68i/pkg/exf/exf_mapfields.F
MITgcm-checkpoint68i/pkg/exf/exf_monitor.F
MITgcm-checkpoint68i/pkg/exf/exf_monitor_ad.F
MITgcm-checkpoint68i/pkg/exf/exf_radiation.F
MITgcm-checkpoint68i/pkg/exf/exf_readparms.F
MITgcm-checkpoint68i/pkg/exf/exf_set_fld.F
MITgcm-checkpoint68i/pkg/exf/exf_set_gen.F
MITgcm-checkpoint68i/pkg/exf/exf_set_obcs.F
MITgcm-checkpoint68i/pkg/exf/exf_set_uv.F
MITgcm-checkpoint68i/pkg/exf/exf_summary.F
MITgcm-checkpoint68i/pkg/exf/exf_swapffields.F
MITgcm-checkpoint68i/pkg/exf/exf_weight_sfx_diags.F
MITgcm-checkpoint68i/pkg/exf/exf_wind.F
MITgcm-checkpoint68i/pkg/exf/exf_zenithangle.F
MITgcm-checkpoint68i/pkg/exf/exf_zenithangle_table.F
MITgcm-checkpoint68i/pkg/fizhi/
MITgcm-checkpoint68i/pkg/fizhi/AtoC.F
MITgcm-checkpoint68i/pkg/fizhi/CtoA.F
MITgcm-checkpoint68i/pkg/fizhi/FIZHI_OPTIONS.h
MITgcm-checkpoint68i/pkg/fizhi/cah-dat.h
MITgcm-checkpoint68i/pkg/fizhi/cai-dat.h
MITgcm-checkpoint68i/pkg/fizhi/chronos.h
MITgcm-checkpoint68i/pkg/fizhi/co2-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/do_fizhi.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_SHP.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_SIZE.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_alarms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_chemistry_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_clockstuff.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagalarms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_diagnostics_init.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_driver.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_earth_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_fillnegs.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_gwdrag.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_chem.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_fixed.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vars.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_veg.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_init_vegsurftiles.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_io_comms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_SIZE.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_land_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_lsm.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_lwrad.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_mnc_init.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_moist.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_mpistuff.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_ocean_coms.h
MITgcm-checkpoint68i/pkg/fizhi/fizhi_rayleigh.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_read_pickup.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_readparms.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_readwrite_vegtiles.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_step_diag.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_swrad.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_tendency_apply.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_turb.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_update_time.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_utils.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_wrapper.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_datetime.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_pickup.F
MITgcm-checkpoint68i/pkg/fizhi/fizhi_write_state.F
MITgcm-checkpoint68i/pkg/fizhi/getcon.F
MITgcm-checkpoint68i/pkg/fizhi/getpwhere.F
MITgcm-checkpoint68i/pkg/fizhi/h2o-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/o3-tran3.h
MITgcm-checkpoint68i/pkg/fizhi/sibber.h
MITgcm-checkpoint68i/pkg/fizhi/slprs.F
MITgcm-checkpoint68i/pkg/fizhi/snwmid.h
MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_corr.F
MITgcm-checkpoint68i/pkg/fizhi/step_fizhi_fg.F
MITgcm-checkpoint68i/pkg/fizhi/step_physics.F
MITgcm-checkpoint68i/pkg/fizhi/update_chemistry_exports.F
MITgcm-checkpoint68i/pkg/fizhi/update_earth_exports.F
MITgcm-checkpoint68i/pkg/fizhi/update_ocean_exports.F
MITgcm-checkpoint68i/pkg/flt/
MITgcm-checkpoint68i/pkg/flt/FLT.h
MITgcm-checkpoint68i/pkg/flt/FLT_BUFF.h
MITgcm-checkpoint68i/pkg/flt/FLT_OPTIONS.h
MITgcm-checkpoint68i/pkg/flt/FLT_SIZE.h
MITgcm-checkpoint68i/pkg/flt/README.flt
MITgcm-checkpoint68i/pkg/flt/exch2_recv_get_vec.F
MITgcm-checkpoint68i/pkg/flt/exch2_send_put_vec.F
MITgcm-checkpoint68i/pkg/flt/exch_recv_get_vec.F
MITgcm-checkpoint68i/pkg/flt/exch_send_put_vec.F
MITgcm-checkpoint68i/pkg/flt/flt_down.F
MITgcm-checkpoint68i/pkg/flt/flt_exch2.F
MITgcm-checkpoint68i/pkg/flt/flt_exchg.F
MITgcm-checkpoint68i/pkg/flt/flt_init_fixed.F
MITgcm-checkpoint68i/pkg/flt/flt_init_varia.F
MITgcm-checkpoint68i/pkg/flt/flt_interp_linear.F
MITgcm-checkpoint68i/pkg/flt/flt_main.F
MITgcm-checkpoint68i/pkg/flt/flt_mapping.F
MITgcm-checkpoint68i/pkg/flt/flt_readparms.F
MITgcm-checkpoint68i/pkg/flt/flt_runga2.F
MITgcm-checkpoint68i/pkg/flt/flt_runga4.F
MITgcm-checkpoint68i/pkg/flt/flt_traj.F
MITgcm-checkpoint68i/pkg/flt/flt_up.F
MITgcm-checkpoint68i/pkg/flt/flt_write_pickup.F
MITgcm-checkpoint68i/pkg/frazil/
MITgcm-checkpoint68i/pkg/frazil/FRAZIL.h
MITgcm-checkpoint68i/pkg/frazil/FRAZIL_OPTIONS.h
MITgcm-checkpoint68i/pkg/frazil/frazil_ad.flow
MITgcm-checkpoint68i/pkg/frazil/frazil_ad_diff.list
MITgcm-checkpoint68i/pkg/frazil/frazil_calc_rhs.F
MITgcm-checkpoint68i/pkg/frazil/frazil_description.tex
MITgcm-checkpoint68i/pkg/frazil/frazil_diagnostics_init.F
MITgcm-checkpoint68i/pkg/frazil/frazil_init_fixed.F
MITgcm-checkpoint68i/pkg/frazil/frazil_init_varia.F
MITgcm-checkpoint68i/pkg/frazil/frazil_tendency_apply.F
MITgcm-checkpoint68i/pkg/gchem/
MITgcm-checkpoint68i/pkg/gchem/GCHEM.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_FIELDS.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_OPTIONS.h
MITgcm-checkpoint68i/pkg/gchem/GCHEM_SIZE.h
MITgcm-checkpoint68i/pkg/gchem/gchem_ad_diff.list
MITgcm-checkpoint68i/pkg/gchem/gchem_add_tendency.F
MITgcm-checkpoint68i/pkg/gchem/gchem_calc_tendency.F
MITgcm-checkpoint68i/pkg/gchem/gchem_check.F
MITgcm-checkpoint68i/pkg/gchem/gchem_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gchem/gchem_fields_load.F
MITgcm-checkpoint68i/pkg/gchem/gchem_forcing_sep.F
MITgcm-checkpoint68i/pkg/gchem/gchem_init_fixed.F
MITgcm-checkpoint68i/pkg/gchem/gchem_init_vari.F
MITgcm-checkpoint68i/pkg/gchem/gchem_output.F
MITgcm-checkpoint68i/pkg/gchem/gchem_readparms.F
MITgcm-checkpoint68i/pkg/gchem/gchem_surfmean.F
MITgcm-checkpoint68i/pkg/gchem/gchem_tr_register.F
MITgcm-checkpoint68i/pkg/gchem/gchem_write_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_FLUX_LIMITER.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_OPTIONS.h
MITgcm-checkpoint68i/pkg/generic_advdiff/GAD_SOM_VARS.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ad_diff.list
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advection.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_advscheme.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_biharm_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c2_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_c4_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_calc_rhs.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_check.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_del2.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_init.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diagnostics_state.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_diff_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst2u1_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_dst3fl_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_exch_som.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_fluxlimit_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_grad_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_implicit_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_fixed.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_init_varia.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_os7mp_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_osc_mul_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_plm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_flx_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_ppm_p3e_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_flx_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_fun.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_hat_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_pqm_p5e_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_read_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_advect.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_exchanges.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_fill_cs_corner.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_lim_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_som_prep_cs_corner.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_x.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3_adv_y.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_u3c4_impl_r.F
MITgcm-checkpoint68i/pkg/generic_advdiff/gad_write_pickup.F
MITgcm-checkpoint68i/pkg/generic_advdiff/generic_advdiff.tex
MITgcm-checkpoint68i/pkg/generic_advdiff/salt_fill.F
MITgcm-checkpoint68i/pkg/ggl90/
MITgcm-checkpoint68i/pkg/ggl90/GGL90.h
MITgcm-checkpoint68i/pkg/ggl90/GGL90_OPTIONS.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ggl90/ggl90_ad_diff.list
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_diff.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_calc_visc.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_check.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_exchanges.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_idemix.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_fixed.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_init_varia.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_output.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_read_pickup.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_readparms.F
MITgcm-checkpoint68i/pkg/ggl90/ggl90_write_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/
MITgcm-checkpoint68i/pkg/gmredi/GMREDI.h
MITgcm-checkpoint68i/pkg/gmredi/GMREDI_OPTIONS.h
MITgcm-checkpoint68i/pkg/gmredi/GMREDI_TAVE.h
MITgcm-checkpoint68i/pkg/gmredi/README_ADJOINT
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad.flow
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ad_diff.list
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_bates_k.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_diff.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_eigs.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_b.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_psi_bvp.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_qgleith.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_tensor.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_calc_urms.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_check.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_description.tex
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_impl.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_do_exch.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_fixed.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_init_varia.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_mnc_init.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_output.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_read_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_readparms.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_residual_flow.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_rtransport.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_limit.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_slope_psi.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_write_pickup.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_xtransport.F
MITgcm-checkpoint68i/pkg/gmredi/gmredi_ytransport.F
MITgcm-checkpoint68i/pkg/gmredi/submeso_calc_psi.F
MITgcm-checkpoint68i/pkg/grdchk/
MITgcm-checkpoint68i/pkg/grdchk/GRDCHK_OPTIONS.h
MITgcm-checkpoint68i/pkg/grdchk/grdchk.h
MITgcm-checkpoint68i/pkg/grdchk/grdchk_check.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_description.tex
MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_obcs_mask.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_get_position.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_getadxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_getxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_init.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_loc.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_main.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_print.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_readparms.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_setxx.F
MITgcm-checkpoint68i/pkg/grdchk/grdchk_summary.F
MITgcm-checkpoint68i/pkg/gridalt/
MITgcm-checkpoint68i/pkg/gridalt/GRIDALT_OPTIONS.h
MITgcm-checkpoint68i/pkg/gridalt/dyn2phys.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_diagnostics_init.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_initialise.F
MITgcm-checkpoint68i/pkg/gridalt/gridalt_mapping.h
MITgcm-checkpoint68i/pkg/gridalt/gridalt_update.F
MITgcm-checkpoint68i/pkg/gridalt/make_phys_grid.F
MITgcm-checkpoint68i/pkg/gridalt/phys2dyn.F
MITgcm-checkpoint68i/pkg/icefront/
MITgcm-checkpoint68i/pkg/icefront/ICEFRONT.h
MITgcm-checkpoint68i/pkg/icefront/ICEFRONT_OPTIONS.h
MITgcm-checkpoint68i/pkg/icefront/ICFSymbol.txt
MITgcm-checkpoint68i/pkg/icefront/icefront_check.F
MITgcm-checkpoint68i/pkg/icefront/icefront_description.tex
MITgcm-checkpoint68i/pkg/icefront/icefront_diagnostics_init.F
MITgcm-checkpoint68i/pkg/icefront/icefront_init_fixed.F
MITgcm-checkpoint68i/pkg/icefront/icefront_init_varia.F
MITgcm-checkpoint68i/pkg/icefront/icefront_readparms.F
MITgcm-checkpoint68i/pkg/icefront/icefront_tendency_apply.F
MITgcm-checkpoint68i/pkg/icefront/icefront_thermodynamics.F
MITgcm-checkpoint68i/pkg/kl10/
MITgcm-checkpoint68i/pkg/kl10/KL10.h
MITgcm-checkpoint68i/pkg/kl10/KL10_DIAGS.h
MITgcm-checkpoint68i/pkg/kl10/KL10_OPTIONS.h
MITgcm-checkpoint68i/pkg/kl10/KL10_TAVE.h
MITgcm-checkpoint68i/pkg/kl10/kl10_calc.F
MITgcm-checkpoint68i/pkg/kl10/kl10_calc_diff.F
MITgcm-checkpoint68i/pkg/kl10/kl10_calc_visc.F
MITgcm-checkpoint68i/pkg/kl10/kl10_check.F
MITgcm-checkpoint68i/pkg/kl10/kl10_diagnostics_init.F
MITgcm-checkpoint68i/pkg/kl10/kl10_init_fixed.F
MITgcm-checkpoint68i/pkg/kl10/kl10_init_varia.F
MITgcm-checkpoint68i/pkg/kl10/kl10_output.F
MITgcm-checkpoint68i/pkg/kl10/kl10_readparms.F
MITgcm-checkpoint68i/pkg/kpp/
MITgcm-checkpoint68i/pkg/kpp/KPP.h
MITgcm-checkpoint68i/pkg/kpp/KPP_OPTIONS.h
MITgcm-checkpoint68i/pkg/kpp/KPP_PARAMS.h
MITgcm-checkpoint68i/pkg/kpp/KPP_TAVE.h
MITgcm-checkpoint68i/pkg/kpp/kpp_ad_diff.list
MITgcm-checkpoint68i/pkg/kpp/kpp_calc.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_ptr.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_s.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_diff_t.F
MITgcm-checkpoint68i/pkg/kpp/kpp_calc_visc.F
MITgcm-checkpoint68i/pkg/kpp/kpp_check.F
MITgcm-checkpoint68i/pkg/kpp/kpp_description.tex
MITgcm-checkpoint68i/pkg/kpp/kpp_diagnostics_init.F
MITgcm-checkpoint68i/pkg/kpp/kpp_do_exch.F
MITgcm-checkpoint68i/pkg/kpp/kpp_forcing_surf.F
MITgcm-checkpoint68i/pkg/kpp/kpp_init_fixed.F
MITgcm-checkpoint68i/pkg/kpp/kpp_init_varia.F
MITgcm-checkpoint68i/pkg/kpp/kpp_output.F
MITgcm-checkpoint68i/pkg/kpp/kpp_readparms.F
MITgcm-checkpoint68i/pkg/kpp/kpp_routines.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_ptr.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_s.F
MITgcm-checkpoint68i/pkg/kpp/kpp_transport_t.F
MITgcm-checkpoint68i/pkg/land/
MITgcm-checkpoint68i/pkg/land/LAND_OPTIONS.h
MITgcm-checkpoint68i/pkg/land/LAND_PARAMS.h
MITgcm-checkpoint68i/pkg/land/LAND_SIZE.h
MITgcm-checkpoint68i/pkg/land/LAND_TAVE.h
MITgcm-checkpoint68i/pkg/land/LAND_VARS.h
MITgcm-checkpoint68i/pkg/land/land_albedo.F
MITgcm-checkpoint68i/pkg/land/land_check.F
MITgcm-checkpoint68i/pkg/land/land_diagnostics_init.F
MITgcm-checkpoint68i/pkg/land/land_diagnostics_state.F
MITgcm-checkpoint68i/pkg/land/land_do_diags.F
MITgcm-checkpoint68i/pkg/land/land_impl_temp.F
MITgcm-checkpoint68i/pkg/land/land_ini_vars.F
MITgcm-checkpoint68i/pkg/land/land_init_fixed.F
MITgcm-checkpoint68i/pkg/land/land_mnc_init.F
MITgcm-checkpoint68i/pkg/land/land_monitor.F
MITgcm-checkpoint68i/pkg/land/land_output.F
MITgcm-checkpoint68i/pkg/land/land_read_pickup.F
MITgcm-checkpoint68i/pkg/land/land_readparms.F
MITgcm-checkpoint68i/pkg/land/land_stepfwd.F
MITgcm-checkpoint68i/pkg/land/land_write_pickup.F
MITgcm-checkpoint68i/pkg/layers/
MITgcm-checkpoint68i/pkg/layers/LAYERS.h
MITgcm-checkpoint68i/pkg/layers/LAYERS_OPTIONS.h
MITgcm-checkpoint68i/pkg/layers/LAYERS_SIZE.h
MITgcm-checkpoint68i/pkg/layers/layers_ad_diff.list
MITgcm-checkpoint68i/pkg/layers/layers_calc.F
MITgcm-checkpoint68i/pkg/layers/layers_check.F
MITgcm-checkpoint68i/pkg/layers/layers_diagnostics_init.F
MITgcm-checkpoint68i/pkg/layers/layers_fluxcalc.F
MITgcm-checkpoint68i/pkg/layers/layers_init_fixed.F
MITgcm-checkpoint68i/pkg/layers/layers_init_varia.F
MITgcm-checkpoint68i/pkg/layers/layers_mnc_init.F
MITgcm-checkpoint68i/pkg/layers/layers_output.F
MITgcm-checkpoint68i/pkg/layers/layers_readparms.F
MITgcm-checkpoint68i/pkg/layers/layers_save.F
MITgcm-checkpoint68i/pkg/layers/layers_thermodynamics.F
MITgcm-checkpoint68i/pkg/layers/layers_wsurf_tr.F
MITgcm-checkpoint68i/pkg/longstep/
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP.h
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_OPTIONS.h
MITgcm-checkpoint68i/pkg/longstep/LONGSTEP_PARAMS.h
MITgcm-checkpoint68i/pkg/longstep/README
MITgcm-checkpoint68i/pkg/longstep/longstep_average.F
MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_average_3d_fac.F
MITgcm-checkpoint68i/pkg/longstep/longstep_check_iters.F
MITgcm-checkpoint68i/pkg/longstep/longstep_correction_step.F
MITgcm-checkpoint68i/pkg/longstep/longstep_diagnostics_init.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_fac.F
MITgcm-checkpoint68i/pkg/longstep/longstep_fill_3d_rs.F
MITgcm-checkpoint68i/pkg/longstep/longstep_forcing_surf.F
MITgcm-checkpoint68i/pkg/longstep/longstep_init_fixed.F
MITgcm-checkpoint68i/pkg/longstep/longstep_init_varia.F
MITgcm-checkpoint68i/pkg/longstep/longstep_readparms.F
MITgcm-checkpoint68i/pkg/longstep/longstep_reset_3d.F
MITgcm-checkpoint68i/pkg/longstep/longstep_thermodynamics.F
MITgcm-checkpoint68i/pkg/matrix/
MITgcm-checkpoint68i/pkg/matrix/MATRIX.h
MITgcm-checkpoint68i/pkg/matrix/MATRIX_OPTIONS.h
MITgcm-checkpoint68i/pkg/matrix/matrix_init_varia.F
MITgcm-checkpoint68i/pkg/matrix/matrix_output.F
MITgcm-checkpoint68i/pkg/matrix/matrix_readparms.F
MITgcm-checkpoint68i/pkg/matrix/matrix_store_tendency.F
MITgcm-checkpoint68i/pkg/matrix/matrix_write_grid.F
MITgcm-checkpoint68i/pkg/matrix/matrix_write_tendency.F
MITgcm-checkpoint68i/pkg/mdsio/
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_3D.h
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_BUFF_WH.h
MITgcm-checkpoint68i/pkg/mdsio/MDSIO_OPTIONS.h
MITgcm-checkpoint68i/pkg/mdsio/mdsio_ad.flow
MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertorl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_buffertors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_check4file.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_facef_read.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_gl_slice.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r4tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_pass_r8tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rd_rec_rs.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_meta.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_section.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_tape.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_read_whalos.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_readvec_loc.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_rw_slice.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg4tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8torl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_seg8tors.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_segxtorx_2d.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_metafiles.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rl.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_wr_rec_rs.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_field.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_meta.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_section.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_tape.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_write_whalos.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_writelocal.F
MITgcm-checkpoint68i/pkg/mdsio/mdsio_writevec_loc.F
MITgcm-checkpoint68i/pkg/mnc/
MITgcm-checkpoint68i/pkg/mnc/CPP_OPTIONS.t
MITgcm-checkpoint68i/pkg/mnc/MNC_BUFF.h
MITgcm-checkpoint68i/pkg/mnc/MNC_COMMON.h
MITgcm-checkpoint68i/pkg/mnc/MNC_OPTIONS.h
MITgcm-checkpoint68i/pkg/mnc/MNC_PARAMS.h
MITgcm-checkpoint68i/pkg/mnc/MNC_SIZE.h
MITgcm-checkpoint68i/pkg/mnc/Makefile
MITgcm-checkpoint68i/pkg/mnc/PACKAGES_CONFIG.t
MITgcm-checkpoint68i/pkg/mnc/README.txt
MITgcm-checkpoint68i/pkg/mnc/SIZE.t
MITgcm-checkpoint68i/pkg/mnc/TESTING_README.txt
MITgcm-checkpoint68i/pkg/mnc/build_netcdf_stubs
MITgcm-checkpoint68i/pkg/mnc/mnc_ad.flow
MITgcm-checkpoint68i/pkg/mnc/mnc_create_dir.c
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_citer.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_cvars.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_fsize.c
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_init.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_missingvals.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_model_attr.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_readwrite.template
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_udim.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cw_write_grid_info.F
MITgcm-checkpoint68i/pkg/mnc/mnc_cwrapper.F
MITgcm-checkpoint68i/pkg/mnc/mnc_description.tex
MITgcm-checkpoint68i/pkg/mnc/mnc_dim.F
MITgcm-checkpoint68i/pkg/mnc/mnc_dump.F
MITgcm-checkpoint68i/pkg/mnc/mnc_file.F
MITgcm-checkpoint68i/pkg/mnc/mnc_grid.F
MITgcm-checkpoint68i/pkg/mnc/mnc_init.F
MITgcm-checkpoint68i/pkg/mnc/mnc_readparms.F
MITgcm-checkpoint68i/pkg/mnc/mnc_test_001.T
MITgcm-checkpoint68i/pkg/mnc/mnc_test_002.T
MITgcm-checkpoint68i/pkg/mnc/mnc_test_utils.T
MITgcm-checkpoint68i/pkg/mnc/mnc_update_time.F
MITgcm-checkpoint68i/pkg/mnc/mnc_utils.F
MITgcm-checkpoint68i/pkg/mnc/mnc_var.F
MITgcm-checkpoint68i/pkg/mnc/parse_local_info
MITgcm-checkpoint68i/pkg/mnc/pre-defined_grids.txt
MITgcm-checkpoint68i/pkg/mom_common/
MITgcm-checkpoint68i/pkg/mom_common/MOM_COMMON_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_common/MOM_VISC.h
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_3d_strain.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_absvort3.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hdiv.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_hfacz.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_ke.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_relvort3.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_strain.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_tension.F
MITgcm-checkpoint68i/pkg/mom_common/mom_calc_visc.F
MITgcm-checkpoint68i/pkg/mom_common/mom_common_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_common/mom_diagnostics_init.F
MITgcm-checkpoint68i/pkg/mom_common/mom_hdissip.F
MITgcm-checkpoint68i/pkg/mom_common/mom_init_fixed.F
MITgcm-checkpoint68i/pkg/mom_common/mom_quasihydrostatic.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_botdrag_coeff.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_implicit_r.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_rviscflux.F
MITgcm-checkpoint68i/pkg/mom_common/mom_u_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_uv_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_botdrag_coeff.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_implicit_r.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_rviscflux.F
MITgcm-checkpoint68i/pkg/mom_common/mom_v_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_limit.F
MITgcm-checkpoint68i/pkg/mom_common/mom_visc_qgl_stretch.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_coriolis_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_metric_nh.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_sidedrag.F
MITgcm-checkpoint68i/pkg/mom_common/mom_w_smag_3d.F
MITgcm-checkpoint68i/pkg/mom_fluxform/
MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM.h
MITgcm-checkpoint68i/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_calc_rtrans.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_fluxform_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_uu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_vu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_adv_wu.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_coriolis.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_del2u.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_cylinder.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_metric_sphere.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_xviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_u_yviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_uv_boundary.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_uv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_vv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_adv_wv.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_coriolis.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_del2v.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_cylinder.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_metric_sphere.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_xviscflux.F
MITgcm-checkpoint68i/pkg/mom_fluxform/mom_v_yviscflux.F
MITgcm-checkpoint68i/pkg/mom_vecinv/
MITgcm-checkpoint68i/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vecinv_ad_diff.list
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_del2uv.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_hdissip.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_grad_ke.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_u_vertshear.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_grad_ke.F
MITgcm-checkpoint68i/pkg/mom_vecinv/mom_vi_v_vertshear.F
MITgcm-checkpoint68i/pkg/monitor/
MITgcm-checkpoint68i/pkg/monitor/MONITOR.h
MITgcm-checkpoint68i/pkg/monitor/MONITOR_OPTIONS.h
MITgcm-checkpoint68i/pkg/monitor/mon_advcfl.F
MITgcm-checkpoint68i/pkg/monitor/mon_advcflw.F
MITgcm-checkpoint68i/pkg/monitor/mon_advcflw2.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_advcfl.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_calc_stats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_description.tex
MITgcm-checkpoint68i/pkg/monitor/mon_init.F
MITgcm-checkpoint68i/pkg/monitor/mon_ke.F
MITgcm-checkpoint68i/pkg/monitor/mon_out.F
MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_printstats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_set_iounit.F
MITgcm-checkpoint68i/pkg/monitor/mon_set_pref.F
MITgcm-checkpoint68i/pkg/monitor/mon_solution.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_latbnd_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_stats_rs.F
MITgcm-checkpoint68i/pkg/monitor/mon_surfcor.F
MITgcm-checkpoint68i/pkg/monitor/mon_vort3.F
MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rl.F
MITgcm-checkpoint68i/pkg/monitor/mon_writestats_rs.F
MITgcm-checkpoint68i/pkg/monitor/monitor.F
MITgcm-checkpoint68i/pkg/monitor/monitor_ad.F
MITgcm-checkpoint68i/pkg/monitor/monitor_ad.flow
MITgcm-checkpoint68i/pkg/monitor/monitor_description.tex
MITgcm-checkpoint68i/pkg/monitor/monitor_g.F
MITgcm-checkpoint68i/pkg/my82/
MITgcm-checkpoint68i/pkg/my82/MY82.h
MITgcm-checkpoint68i/pkg/my82/MY82_OPTIONS.h
MITgcm-checkpoint68i/pkg/my82/my82_calc.F
MITgcm-checkpoint68i/pkg/my82/my82_calc_diff.F
MITgcm-checkpoint68i/pkg/my82/my82_calc_visc.F
MITgcm-checkpoint68i/pkg/my82/my82_check.F
MITgcm-checkpoint68i/pkg/my82/my82_diagnostics_init.F
MITgcm-checkpoint68i/pkg/my82/my82_init_fixed.F
MITgcm-checkpoint68i/pkg/my82/my82_init_varia.F
MITgcm-checkpoint68i/pkg/my82/my82_output.F
MITgcm-checkpoint68i/pkg/my82/my82_readparms.F
MITgcm-checkpoint68i/pkg/my82/my82_ri_number.F
MITgcm-checkpoint68i/pkg/mypackage/
MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE.h
MITgcm-checkpoint68i/pkg/mypackage/MYPACKAGE_OPTIONS.h
MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad.flow
MITgcm-checkpoint68i/pkg/mypackage/mypackage_ad_diff.list
MITgcm-checkpoint68i/pkg/mypackage/mypackage_calc_rhs.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_check.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_description.tex
MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_init.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_diagnostics_state.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_fixed.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_init_varia.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_mnc_init.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_read_pickup.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_readparms.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_tendency_apply.F
MITgcm-checkpoint68i/pkg/mypackage/mypackage_write_pickup.F
MITgcm-checkpoint68i/pkg/obcs/
MITgcm-checkpoint68i/pkg/obcs/OBCS_FIELDS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_GRID.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_OPTIONS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_PARAMS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_PTRACERS.h
MITgcm-checkpoint68i/pkg/obcs/OBCS_SEAICE.h
MITgcm-checkpoint68i/pkg/obcs/ORLANSKI.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad.flow
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/obcs/obcs_ad_diff.list
MITgcm-checkpoint68i/pkg/obcs/obcs_add_tides.F
MITgcm-checkpoint68i/pkg/obcs/obcs_adjust.F
MITgcm-checkpoint68i/pkg/obcs/obcs_adjust_uvice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_eta.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ptracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_r_star.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_seaice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_surf_dr.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_ts.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uv.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_uvice.F
MITgcm-checkpoint68i/pkg/obcs/obcs_apply_w.F
MITgcm-checkpoint68i/pkg/obcs/obcs_balance_flow.F
MITgcm-checkpoint68i/pkg/obcs/obcs_calc.F
MITgcm-checkpoint68i/pkg/obcs/obcs_calc_stevens.F
MITgcm-checkpoint68i/pkg/obcs/obcs_check.F
MITgcm-checkpoint68i/pkg/obcs/obcs_check_depths.F
MITgcm-checkpoint68i/pkg/obcs/obcs_copy_tracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_copy_uv_n.F
MITgcm-checkpoint68i/pkg/obcs/obcs_description.tex
MITgcm-checkpoint68i/pkg/obcs/obcs_diag_balance.F
MITgcm-checkpoint68i/pkg/obcs/obcs_exchanges.F
MITgcm-checkpoint68i/pkg/obcs/obcs_exf_load.F
MITgcm-checkpoint68i/pkg/obcs/obcs_fields_load.F
MITgcm-checkpoint68i/pkg/obcs/obcs_init_fixed.F
MITgcm-checkpoint68i/pkg/obcs/obcs_init_variables.F
MITgcm-checkpoint68i/pkg/obcs/obcs_mon_stats.F
MITgcm-checkpoint68i/pkg/obcs/obcs_monitor.F
MITgcm-checkpoint68i/pkg/obcs/obcs_output.F
MITgcm-checkpoint68i/pkg/obcs/obcs_prescribe_read.F
MITgcm-checkpoint68i/pkg/obcs/obcs_read_pickup.F
MITgcm-checkpoint68i/pkg/obcs/obcs_readparms.F
MITgcm-checkpoint68i/pkg/obcs/obcs_save_uv_n.F
MITgcm-checkpoint68i/pkg/obcs/obcs_seaice_sponge.F
MITgcm-checkpoint68i/pkg/obcs/obcs_set_connect.F
MITgcm-checkpoint68i/pkg/obcs/obcs_sponge.F
MITgcm-checkpoint68i/pkg/obcs/obcs_u1_adv_tracer.F
MITgcm-checkpoint68i/pkg/obcs/obcs_write_pickup.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_east.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_init.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_north.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_south.F
MITgcm-checkpoint68i/pkg/obcs/orlanski_west.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/
MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_PARAMS.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/CPL_TAVE.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCNCPL.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/OCN_CPL_OPTIONS.h
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_exch_configs.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_export_import_data.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_import_cplparms.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_ini_vars.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_init_fixed.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_output.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_readparms.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_register.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/cpl_write_pickup.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_apply_import.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_check_cplconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_diags.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_cpl_read_pickup.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_data.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_fields.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_export_ocnconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_atmconfig.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_import_fields.F
MITgcm-checkpoint68i/pkg/ocn_compon_interf/ocn_store_my_data.F
MITgcm-checkpoint68i/pkg/offline/
MITgcm-checkpoint68i/pkg/offline/OFFLINE.h
MITgcm-checkpoint68i/pkg/offline/OFFLINE_OPTIONS.h
MITgcm-checkpoint68i/pkg/offline/OFFLINE_SWITCH.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/offline/offline_ad_diff.list
MITgcm-checkpoint68i/pkg/offline/offline_check.F
MITgcm-checkpoint68i/pkg/offline/offline_fields_load.F
MITgcm-checkpoint68i/pkg/offline/offline_get_diffus.F
MITgcm-checkpoint68i/pkg/offline/offline_init_varia.F
MITgcm-checkpoint68i/pkg/offline/offline_readparms.F
MITgcm-checkpoint68i/pkg/offline/offline_reset_parms.F
MITgcm-checkpoint68i/pkg/openad/
MITgcm-checkpoint68i/pkg/openad/OPENAD_OPTIONS.h
MITgcm-checkpoint68i/pkg/openad/ad_s_different_multiple.F
MITgcm-checkpoint68i/pkg/openad/ad_s_ifnblnk.F
MITgcm-checkpoint68i/pkg/openad/ad_s_ilnblnk.F
MITgcm-checkpoint68i/pkg/openad/ad_s_mds_reclen.F
MITgcm-checkpoint68i/pkg/openad/externalDummies.F
MITgcm-checkpoint68i/pkg/openad/findAndDiff.bash
MITgcm-checkpoint68i/pkg/openad/inner_do_loop.F
MITgcm-checkpoint68i/pkg/openad/openad_ad_diff.list
MITgcm-checkpoint68i/pkg/openad/openad_checkpointInit.F
MITgcm-checkpoint68i/pkg/openad/openad_dumpAdjoint.F
MITgcm-checkpoint68i/pkg/openad/seawater.F
MITgcm-checkpoint68i/pkg/openad/the_model_main.F
MITgcm-checkpoint68i/pkg/opps/
MITgcm-checkpoint68i/pkg/opps/OPPS.h
MITgcm-checkpoint68i/pkg/opps/OPPS_OPTIONS.h
MITgcm-checkpoint68i/pkg/opps/opps_calc.F
MITgcm-checkpoint68i/pkg/opps/opps_check.F
MITgcm-checkpoint68i/pkg/opps/opps_init.F
MITgcm-checkpoint68i/pkg/opps/opps_interface.F
MITgcm-checkpoint68i/pkg/opps/opps_readparms.F
MITgcm-checkpoint68i/pkg/pkg_depend
MITgcm-checkpoint68i/pkg/pkg_groups
MITgcm-checkpoint68i/pkg/pp81/
MITgcm-checkpoint68i/pkg/pp81/PP81.h
MITgcm-checkpoint68i/pkg/pp81/PP81_OPTIONS.h
MITgcm-checkpoint68i/pkg/pp81/pp81_calc.F
MITgcm-checkpoint68i/pkg/pp81/pp81_calc_diff.F
MITgcm-checkpoint68i/pkg/pp81/pp81_calc_visc.F
MITgcm-checkpoint68i/pkg/pp81/pp81_check.F
MITgcm-checkpoint68i/pkg/pp81/pp81_diagnostics_init.F
MITgcm-checkpoint68i/pkg/pp81/pp81_init_fixed.F
MITgcm-checkpoint68i/pkg/pp81/pp81_init_varia.F
MITgcm-checkpoint68i/pkg/pp81/pp81_output.F
MITgcm-checkpoint68i/pkg/pp81/pp81_readparms.F
MITgcm-checkpoint68i/pkg/pp81/pp81_ri_number.F
MITgcm-checkpoint68i/pkg/profiles/
MITgcm-checkpoint68i/pkg/profiles/PROFILES_OPTIONS.h
MITgcm-checkpoint68i/pkg/profiles/PROFILES_SIZE.h
MITgcm-checkpoint68i/pkg/profiles/active_file_control_profiles.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles.flow
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_ad.F
MITgcm-checkpoint68i/pkg/profiles/active_file_profiles_g.F
MITgcm-checkpoint68i/pkg/profiles/cost_profiles.F
MITgcm-checkpoint68i/pkg/profiles/profiles.flow
MITgcm-checkpoint68i/pkg/profiles/profiles.h
MITgcm-checkpoint68i/pkg/profiles/profiles_ad_diff.list
MITgcm-checkpoint68i/pkg/profiles/profiles_findunit.F
MITgcm-checkpoint68i/pkg/profiles/profiles_ini_io.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_fixed.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_ncfile.F
MITgcm-checkpoint68i/pkg/profiles/profiles_init_varia.F
MITgcm-checkpoint68i/pkg/profiles/profiles_inloop.F
MITgcm-checkpoint68i/pkg/profiles/profiles_interp.F
MITgcm-checkpoint68i/pkg/profiles/profiles_readparms.F
MITgcm-checkpoint68i/pkg/profiles/profiles_readvector.F
MITgcm-checkpoint68i/pkg/ptracers/
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_FIELDS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_MOD.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_OPTIONS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_PARAMS.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_SIZE.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_START.h
MITgcm-checkpoint68i/pkg/ptracers/PTRACERS_TAVE.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad.flow
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_diff.list
MITgcm-checkpoint68i/pkg/ptracers/ptracers_ad_dump.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_adcommon.h
MITgcm-checkpoint68i/pkg/ptracers/ptracers_apply_forcing.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_calc_wsurf_tr.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_check.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_check_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_convect.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_debug.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_init.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_diagnostics_state.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_data_mod.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_dyn_state_mod.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_fields_blocking_exch.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_forcing_surf.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_fixed.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_init_varia.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_integrate.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_mnc_init.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_monitor_ad.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_output.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_read_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_readparms.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_reset.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_set_iolabel.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_switch_onoff.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_timeave.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_turnoff_io.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_pickup.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_state.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_write_timeave.F
MITgcm-checkpoint68i/pkg/ptracers/ptracers_zonal_filt_apply.F
MITgcm-checkpoint68i/pkg/rbcs/
MITgcm-checkpoint68i/pkg/rbcs/RBCS_FIELDS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_OPTIONS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_PARAMS.h
MITgcm-checkpoint68i/pkg/rbcs/RBCS_SIZE.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/rbcs/rbcs_ad_diff.list
MITgcm-checkpoint68i/pkg/rbcs/rbcs_add_tendency.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_fields_load.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_fixed.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_init_varia.F
MITgcm-checkpoint68i/pkg/rbcs/rbcs_readparms.F
MITgcm-checkpoint68i/pkg/regrid/
MITgcm-checkpoint68i/pkg/regrid/Makefile
MITgcm-checkpoint68i/pkg/regrid/REGRID.h
MITgcm-checkpoint68i/pkg/regrid/REGRID_OPTIONS.h
MITgcm-checkpoint68i/pkg/regrid/REGRID_SIZE.h
MITgcm-checkpoint68i/pkg/regrid/regrid_check.F
MITgcm-checkpoint68i/pkg/regrid/regrid_description.tex
MITgcm-checkpoint68i/pkg/regrid/regrid_init_fixed.F
MITgcm-checkpoint68i/pkg/regrid/regrid_init_varia.F
MITgcm-checkpoint68i/pkg/regrid/regrid_mnc_init.F
MITgcm-checkpoint68i/pkg/regrid/regrid_readparms.F
MITgcm-checkpoint68i/pkg/regrid/regrid_scalar_out.template
MITgcm-checkpoint68i/pkg/runclock/
MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK.h
MITgcm-checkpoint68i/pkg/runclock/RUNCLOCK_OPTIONS.h
MITgcm-checkpoint68i/pkg/runclock/runclock_check.F
MITgcm-checkpoint68i/pkg/runclock/runclock_continue.F
MITgcm-checkpoint68i/pkg/runclock/runclock_gettime.F
MITgcm-checkpoint68i/pkg/runclock/runclock_init.F
MITgcm-checkpoint68i/pkg/runclock/runclock_readparms.F
MITgcm-checkpoint68i/pkg/rw/
MITgcm-checkpoint68i/pkg/rw/RW_MFLDS.h
MITgcm-checkpoint68i/pkg/rw/RW_OPTIONS.h
MITgcm-checkpoint68i/pkg/rw/get_write_global_fld.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rl.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xy_rs.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rl.F
MITgcm-checkpoint68i/pkg/rw/read_fld_xyz_rs.F
MITgcm-checkpoint68i/pkg/rw/read_glvec_rl.F
MITgcm-checkpoint68i/pkg/rw/read_glvec_rs.F
MITgcm-checkpoint68i/pkg/rw/read_mflds.F
MITgcm-checkpoint68i/pkg/rw/read_rec.F
MITgcm-checkpoint68i/pkg/rw/rw_ad.flow
MITgcm-checkpoint68i/pkg/rw/rw_ad_diff.list
MITgcm-checkpoint68i/pkg/rw/rw_get_suffix.F
MITgcm-checkpoint68i/pkg/rw/set_write_global_fld.F
MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_3d_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_s3d_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xy_rs.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rl.F
MITgcm-checkpoint68i/pkg/rw/write_fld_xyz_rs.F
MITgcm-checkpoint68i/pkg/rw/write_glvec_rl.F
MITgcm-checkpoint68i/pkg/rw/write_glvec_rs.F
MITgcm-checkpoint68i/pkg/rw/write_local_rl.F
MITgcm-checkpoint68i/pkg/rw/write_local_rs.F
MITgcm-checkpoint68i/pkg/rw/write_rec.F
MITgcm-checkpoint68i/pkg/salt_plume/
MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME.h
MITgcm-checkpoint68i/pkg/salt_plume/SALT_PLUME_OPTIONS.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_ad_diff.list
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_apply.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_calc_depth.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_check.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_description.tex
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_fill.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_diagnostics_init.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_do_exch.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_forcing_surf.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_frac.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_fixed.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_init_varia.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_mnc_init.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_readparms.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_s.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_tendency_apply_t.F
MITgcm-checkpoint68i/pkg/salt_plume/salt_plume_volfrac.F
MITgcm-checkpoint68i/pkg/sbo/
MITgcm-checkpoint68i/pkg/sbo/SBO.h
MITgcm-checkpoint68i/pkg/sbo/SBO_OPTIONS.h
MITgcm-checkpoint68i/pkg/sbo/sbo_calc.F
MITgcm-checkpoint68i/pkg/sbo/sbo_check.F
MITgcm-checkpoint68i/pkg/sbo/sbo_description.tex
MITgcm-checkpoint68i/pkg/sbo/sbo_output.F
MITgcm-checkpoint68i/pkg/sbo/sbo_readparms.F
MITgcm-checkpoint68i/pkg/sbo/sbo_rho.F
MITgcm-checkpoint68i/pkg/seaice/
MITgcm-checkpoint68i/pkg/seaice/SEAICE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_COST.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_PARAMS.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_SIZE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_TAVE.h
MITgcm-checkpoint68i/pkg/seaice/SEAICE_TRACER.h
MITgcm-checkpoint68i/pkg/seaice/advect.F
MITgcm-checkpoint68i/pkg/seaice/cost_ice_test.F
MITgcm-checkpoint68i/pkg/seaice/diffus.F
MITgcm-checkpoint68i/pkg/seaice/dynsolver.F
MITgcm-checkpoint68i/pkg/seaice/lsr.F
MITgcm-checkpoint68i/pkg/seaice/ostres.F
MITgcm-checkpoint68i/pkg/seaice/seaice.flow
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_diff.list
MITgcm-checkpoint68i/pkg/seaice/seaice_ad_dump.F
MITgcm-checkpoint68i/pkg/seaice/seaice_advdiff.F
MITgcm-checkpoint68i/pkg/seaice/seaice_advection.F
MITgcm-checkpoint68i/pkg/seaice/seaice_bottomdrag_coeffs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_budget_ocean.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_ice_strength.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_lhs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_residual.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_rhs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_strainrates.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_stressdiv.F
MITgcm-checkpoint68i/pkg/seaice/seaice_calc_viscosities.F
MITgcm-checkpoint68i/pkg/seaice/seaice_check.F
MITgcm-checkpoint68i/pkg/seaice/seaice_check_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_accumulate_mean.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_areasst.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_concentration.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_driver.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_export.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_final.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_fixed.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_init_varia.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sensi.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sss.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_sst.F
MITgcm-checkpoint68i/pkg/seaice/seaice_cost_weights.F
MITgcm-checkpoint68i/pkg/seaice/seaice_ctrl_map_ini.F
MITgcm-checkpoint68i/pkg/seaice/seaice_description.tex
MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_init.F
MITgcm-checkpoint68i/pkg/seaice/seaice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/seaice/seaice_diffusion.F
MITgcm-checkpoint68i/pkg/seaice/seaice_do_ridging.F
MITgcm-checkpoint68i/pkg/seaice/seaice_dynsolver.F
MITgcm-checkpoint68i/pkg/seaice/seaice_evp.F
MITgcm-checkpoint68i/pkg/seaice/seaice_fake.F
MITgcm-checkpoint68i/pkg/seaice/seaice_fgmres.F
MITgcm-checkpoint68i/pkg/seaice/seaice_freedrift.F
MITgcm-checkpoint68i/pkg/seaice/seaice_get_dynforcing.F
MITgcm-checkpoint68i/pkg/seaice/seaice_growth.F
MITgcm-checkpoint68i/pkg/seaice/seaice_growth_adx.F
MITgcm-checkpoint68i/pkg/seaice/seaice_init_fixed.F
MITgcm-checkpoint68i/pkg/seaice/seaice_init_varia.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_redist.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_remap.F
MITgcm-checkpoint68i/pkg/seaice/seaice_itd_sum.F
MITgcm-checkpoint68i/pkg/seaice/seaice_jacvec.F
MITgcm-checkpoint68i/pkg/seaice/seaice_jfnk.F
MITgcm-checkpoint68i/pkg/seaice/seaice_krylov.F
MITgcm-checkpoint68i/pkg/seaice/seaice_lsr.F
MITgcm-checkpoint68i/pkg/seaice/seaice_map_thsice.F
MITgcm-checkpoint68i/pkg/seaice/seaice_mnc_init.F
MITgcm-checkpoint68i/pkg/seaice/seaice_model.F
MITgcm-checkpoint68i/pkg/seaice/seaice_mom_advection.F
MITgcm-checkpoint68i/pkg/seaice/seaice_monitor.F
MITgcm-checkpoint68i/pkg/seaice/seaice_monitor_ad.F
MITgcm-checkpoint68i/pkg/seaice/seaice_obcs_output.F
MITgcm-checkpoint68i/pkg/seaice/seaice_ocean_stress.F
MITgcm-checkpoint68i/pkg/seaice/seaice_oceandrag_coeffs.F
MITgcm-checkpoint68i/pkg/seaice/seaice_output.F
MITgcm-checkpoint68i/pkg/seaice/seaice_preconditioner.F
MITgcm-checkpoint68i/pkg/seaice/seaice_prepare_ridging.F
MITgcm-checkpoint68i/pkg/seaice/seaice_read_pickup.F
MITgcm-checkpoint68i/pkg/seaice/seaice_readparms.F
MITgcm-checkpoint68i/pkg/seaice/seaice_reg_ridge.F
MITgcm-checkpoint68i/pkg/seaice/seaice_solve4temp.F
MITgcm-checkpoint68i/pkg/seaice/seaice_summary.F
MITgcm-checkpoint68i/pkg/seaice/seaice_tracer_phys.F
MITgcm-checkpoint68i/pkg/seaice/seaice_turnoff_io.F
MITgcm-checkpoint68i/pkg/seaice/seaice_write_pickup.F
MITgcm-checkpoint68i/pkg/shap_filt/
MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT.h
MITgcm-checkpoint68i/pkg/shap_filt/SHAP_FILT_OPTIONS.h
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_ad_diff.list
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_ts.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_apply_uv.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_computvort.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_diagnostics_init.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_init_fixed.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_readparms.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_relvort3.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s1.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s2.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracer_s4.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_tracerold.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_u.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s1.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s2c.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_uv_s4.F
MITgcm-checkpoint68i/pkg/shap_filt/shap_filt_v.F
MITgcm-checkpoint68i/pkg/shelfice/
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_COST.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/shelfice/SHELFICE_TAVE.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/shelfice/shelfice_ad_diff.list
MITgcm-checkpoint68i/pkg/shelfice/shelfice_check.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_accumulate.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_final.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_cost_shifwflx.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_diagnostics_drag.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_forcing_surf.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_depths.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_fixed.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_init_varia.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_mask_seaice.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_mnc_init.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_output.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_read_pickup.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_readparms.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_c_mask.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_calc_w.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_state.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remesh_uv_mask.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_remeshing.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_step_icemass.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_thermodynamics.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_u_drag_coeff.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_v_drag_coeff.F
MITgcm-checkpoint68i/pkg/shelfice/shelfice_write_pickup.F
MITgcm-checkpoint68i/pkg/showflops/
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS.h
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_INIT.h
MITgcm-checkpoint68i/pkg/showflops/SHOWFLOPS_OPTIONS.h
MITgcm-checkpoint68i/pkg/showflops/showflops_ad.flow
MITgcm-checkpoint68i/pkg/showflops/showflops_init.F
MITgcm-checkpoint68i/pkg/showflops/showflops_inloop.F
MITgcm-checkpoint68i/pkg/showflops/showflops_insolve.F
MITgcm-checkpoint68i/pkg/smooth/
MITgcm-checkpoint68i/pkg/smooth/SMOOTH.h
MITgcm-checkpoint68i/pkg/smooth/SMOOTH_OPTIONS.h
MITgcm-checkpoint68i/pkg/smooth/smooth2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_ad_diff.list
MITgcm-checkpoint68i/pkg/smooth/smooth_basic2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_check.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl2dw.F
MITgcm-checkpoint68i/pkg/smooth/smooth_correl3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_description.tex
MITgcm-checkpoint68i/pkg/smooth/smooth_diff2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_diff3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_filtervar3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_hetero2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_impldiff.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init2d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init3d.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init_fixed.F
MITgcm-checkpoint68i/pkg/smooth/smooth_init_varia.F
MITgcm-checkpoint68i/pkg/smooth/smooth_readparms.F
MITgcm-checkpoint68i/pkg/smooth/smooth_rhs.F
MITgcm-checkpoint68i/pkg/sphere/
MITgcm-checkpoint68i/pkg/sphere/exch_all_2d_rl.F
MITgcm-checkpoint68i/pkg/sphere/sphere.F
MITgcm-checkpoint68i/pkg/sphere/sphere.h
MITgcm-checkpoint68i/pkg/sphere/sphere_ad.flow
MITgcm-checkpoint68i/pkg/sphere/sphere_ad_diff.list
MITgcm-checkpoint68i/pkg/streamice/
MITgcm-checkpoint68i/pkg/streamice/STREAMICE.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_ADV.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_BDRY.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CG.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_CTRL_FLUX.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/streamice/STREAMICE_PETSC.h
MITgcm-checkpoint68i/pkg/streamice/adstreamice_cg_solve.F
MITgcm-checkpoint68i/pkg/streamice/adstreamice_invert_surf_forthick.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_prime_streamice.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice.F
MITgcm-checkpoint68i/pkg/streamice/eta_gl_streamice_prime.F
MITgcm-checkpoint68i/pkg/streamice/phi_gl_streamice.F
MITgcm-checkpoint68i/pkg/streamice/slope_limiter.F
MITgcm-checkpoint68i/pkg/streamice/streamice.flow
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/streamice/streamice_ad_diff.list
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_x.F
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_flux_fl_y.F
MITgcm-checkpoint68i/pkg/streamice/streamice_adv_front.F
MITgcm-checkpoint68i/pkg/streamice/streamice_advect_2dtracer.F
MITgcm-checkpoint68i/pkg/streamice/streamice_advect_thickness.F
MITgcm-checkpoint68i/pkg/streamice/streamice_apply_flux_ctrl.F
MITgcm-checkpoint68i/pkg/streamice/streamice_bstress_exponent.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_functions.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_matfree.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_solve_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cg_wrapper.F
MITgcm-checkpoint68i/pkg/streamice/streamice_check.F
MITgcm-checkpoint68i/pkg/streamice/streamice_cost_surf_accum.F
MITgcm-checkpoint68i/pkg/streamice/streamice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_fd.F
MITgcm-checkpoint68i/pkg/streamice/streamice_driving_stress_ppm.F
MITgcm-checkpoint68i/pkg/streamice/streamice_dump.F
MITgcm-checkpoint68i/pkg/streamice/streamice_dump_ad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_fields_load.F
MITgcm-checkpoint68i/pkg/streamice/streamice_finalize_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_forced_buttress.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_fp_err_oad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_fp_err.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err.F
MITgcm-checkpoint68i/pkg/streamice/streamice_get_vel_resid_err_oad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_diagnostics.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_fixed.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_phi.F
MITgcm-checkpoint68i/pkg/streamice/streamice_init_varia.F
MITgcm-checkpoint68i/pkg/streamice/streamice_initialise_petsc.F
MITgcm-checkpoint68i/pkg/streamice/streamice_invert_surf_forthick.F
MITgcm-checkpoint68i/pkg/streamice/streamice_petsc_numerate.F
MITgcm-checkpoint68i/pkg/streamice/streamice_petscmatdestroy.F
MITgcm-checkpoint68i/pkg/streamice/streamice_read_pickup.F
MITgcm-checkpoint68i/pkg/streamice/streamice_readparms.F
MITgcm-checkpoint68i/pkg/streamice/streamice_taub.F
MITgcm-checkpoint68i/pkg/streamice/streamice_timestep.F
MITgcm-checkpoint68i/pkg/streamice/streamice_tridiag_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_upd_ffrac_uncoupled.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phi.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_phistage.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve.F
MITgcm-checkpoint68i/pkg/streamice/streamice_vel_solve_openad.F
MITgcm-checkpoint68i/pkg/streamice/streamice_velmask_upd.F
MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta.F
MITgcm-checkpoint68i/pkg/streamice/streamice_visc_beta_hybrid.F
MITgcm-checkpoint68i/pkg/streamice/streamice_write_pickup.F
MITgcm-checkpoint68i/pkg/thsice/
MITgcm-checkpoint68i/pkg/thsice/THSICE_COST.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_DEBUG.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_OPTIONS.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_PARAMS.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_SIZE.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_TAVE.h
MITgcm-checkpoint68i/pkg/thsice/THSICE_VARS.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad.flow
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev1_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev2_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev3_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_check_lev4_dir.h
MITgcm-checkpoint68i/pkg/thsice/thsice_ad_diff.list
MITgcm-checkpoint68i/pkg/thsice/thsice_advdiff.F
MITgcm-checkpoint68i/pkg/thsice/thsice_advection.F
MITgcm-checkpoint68i/pkg/thsice/thsice_albedo.F
MITgcm-checkpoint68i/pkg/thsice/thsice_ave.F
MITgcm-checkpoint68i/pkg/thsice/thsice_balance_frw.F
MITgcm-checkpoint68i/pkg/thsice/thsice_calc_thickn.F
MITgcm-checkpoint68i/pkg/thsice/thsice_check.F
MITgcm-checkpoint68i/pkg/thsice/thsice_check_conserv.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_driver.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_final.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_init_varia.F
MITgcm-checkpoint68i/pkg/thsice/thsice_cost_test.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_init.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diagnostics_state.F
MITgcm-checkpoint68i/pkg/thsice/thsice_diffusion.F
MITgcm-checkpoint68i/pkg/thsice/thsice_do_advect.F
MITgcm-checkpoint68i/pkg/thsice/thsice_do_exch.F
MITgcm-checkpoint68i/pkg/thsice/thsice_extend.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_bulkf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_exf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_ocean.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_precip.F
MITgcm-checkpoint68i/pkg/thsice/thsice_get_velocity.F
MITgcm-checkpoint68i/pkg/thsice/thsice_impl_temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_ini_vars.F
MITgcm-checkpoint68i/pkg/thsice/thsice_init_fixed.F
MITgcm-checkpoint68i/pkg/thsice/thsice_main.F
MITgcm-checkpoint68i/pkg/thsice/thsice_map_exf.F
MITgcm-checkpoint68i/pkg/thsice/thsice_mnc_init.F
MITgcm-checkpoint68i/pkg/thsice/thsice_monitor.F
MITgcm-checkpoint68i/pkg/thsice/thsice_output.F
MITgcm-checkpoint68i/pkg/thsice/thsice_read_pickup.F
MITgcm-checkpoint68i/pkg/thsice/thsice_readparms.F
MITgcm-checkpoint68i/pkg/thsice/thsice_reshape_layers.F
MITgcm-checkpoint68i/pkg/thsice/thsice_salt_plume.F
MITgcm-checkpoint68i/pkg/thsice/thsice_slab_ocean.F
MITgcm-checkpoint68i/pkg/thsice/thsice_solve4temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_step_fwd.F
MITgcm-checkpoint68i/pkg/thsice/thsice_step_temp.F
MITgcm-checkpoint68i/pkg/thsice/thsice_test_addfluid.h
MITgcm-checkpoint68i/pkg/thsice/thsice_turnoff_io.F
MITgcm-checkpoint68i/pkg/thsice/thsice_write_pickup.F
MITgcm-checkpoint68i/pkg/timeave/
MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_OPTIONS.h
MITgcm-checkpoint68i/pkg/timeave/TIMEAVE_STATV.h
MITgcm-checkpoint68i/pkg/timeave/timeave_ad_diff.list
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1k1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_1vfc.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2v.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_2vfc.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumul_dif_1t.F
MITgcm-checkpoint68i/pkg/timeave/timeave_cumulate.F
MITgcm-checkpoint68i/pkg/timeave/timeave_description.tex
MITgcm-checkpoint68i/pkg/timeave/timeave_init_fixed.F
MITgcm-checkpoint68i/pkg/timeave/timeave_norma_2v.F
MITgcm-checkpoint68i/pkg/timeave/timeave_normalize.F
MITgcm-checkpoint68i/pkg/timeave/timeave_reset.F
MITgcm-checkpoint68i/pkg/timeave/timeave_statv_write.F
MITgcm-checkpoint68i/pkg/timeave/timeave_statvars.F
MITgcm-checkpoint68i/pkg/timeave/timeave_surf_flux.F
MITgcm-checkpoint68i/pkg/zonal_filt/
MITgcm-checkpoint68i/pkg/zonal_filt/FFTPACK.h
MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT.h
MITgcm-checkpoint68i/pkg/zonal_filt/ZONAL_FILT_OPTIONS.h
MITgcm-checkpoint68i/pkg/zonal_filt/fftpack.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_ts.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_apply_uv.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_init.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_nofill.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_postsmooth.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_presmooth.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filt_readparms.F
MITgcm-checkpoint68i/pkg/zonal_filt/zonal_filter.F
MITgcm-checkpoint68i/tools/
MITgcm-checkpoint68i/tools/OAD_support/
MITgcm-checkpoint68i/tools/OAD_support/OAD_active.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_cp.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_regular_cp.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_rev.F90
MITgcm-checkpoint68i/tools/OAD_support/OAD_tape.F90
MITgcm-checkpoint68i/tools/OAD_support/ad_inline.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xy.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_read_xyz.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.active_write_xy.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.dummy_in_stepping.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rl.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.exch1_rs.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_max_r8.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_r8.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.global_sum_tile_rl.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.regular.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.revolve.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.sa_cg2d.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.split.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.split_non_anonymous.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_cg_solve.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_fp_err_oad.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_get_vel_resid_err_oad.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_invert_surf_forthick.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_smooth_adjoint_field.F
MITgcm-checkpoint68i/tools/OAD_support/ad_template.streamice_vel_phistage.F
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.awk
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetHeaders.csh
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.awk
MITgcm-checkpoint68i/tools/OAD_support/cb2mGetModules.csh
MITgcm-checkpoint68i/tools/OAD_support/cb2mUseModules.bash
MITgcm-checkpoint68i/tools/OAD_support/dontCompile
MITgcm-checkpoint68i/tools/OAD_support/dontTransform
MITgcm-checkpoint68i/tools/OAD_support/fixData.sed
MITgcm-checkpoint68i/tools/OAD_support/iaddr.c
MITgcm-checkpoint68i/tools/OAD_support/insertTemplateDir.bash
MITgcm-checkpoint68i/tools/OAD_support/keepOriginal
MITgcm-checkpoint68i/tools/OAD_support/revolve.F90
MITgcm-checkpoint68i/tools/OAD_support/stop2print.sed
MITgcm-checkpoint68i/tools/OAD_support/strip.sed
MITgcm-checkpoint68i/tools/OAD_support/timeRatio.c
MITgcm-checkpoint68i/tools/OAD_support/w2f__types.F90
MITgcm-checkpoint68i/tools/ad_taf_output.f.adtrick.diff
MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_del1
MITgcm-checkpoint68i/tools/ad_taf_output.f.diva.diff_full
MITgcm-checkpoint68i/tools/ad_taf_output.f.onlyfwd.diff
MITgcm-checkpoint68i/tools/adjoint_options/
MITgcm-checkpoint68i/tools/adjoint_options/MITgcm-c64l-TAFv2.patch
MITgcm-checkpoint68i/tools/adjoint_options/README.patch
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_default
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_diva
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_f95
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_oad
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_state_final
MITgcm-checkpoint68i/tools/adjoint_options/adjoint_tamc_compatibility
MITgcm-checkpoint68i/tools/adjoint_sed
MITgcm-checkpoint68i/tools/as
MITgcm-checkpoint68i/tools/build_options/
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-6_f90+mpi_caspur
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-6_sx90_dkrz
MITgcm-checkpoint68i/tools/build_options/SUPER-UX_SX-ACE_sxf90_awi
MITgcm-checkpoint68i/tools/build_options/cygwin_ia32_g77
MITgcm-checkpoint68i/tools/build_options/darwin_absoft_f77
MITgcm-checkpoint68i/tools/build_options/darwin_amd64_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_arm64_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_g95
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_gfortran
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_ifort
MITgcm-checkpoint68i/tools/build_options/darwin_ia32_pgf95_trane
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_f95
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_g77
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther+wienders
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_panther_baylor
MITgcm-checkpoint68i/tools/build_options/darwin_ppc_xlf_tiger_baylor
MITgcm-checkpoint68i/tools/build_options/linux_alpha_g77
MITgcm-checkpoint68i/tools/build_options/linux_amd64_absoft
MITgcm-checkpoint68i/tools/build_options/linux_amd64_g77
MITgcm-checkpoint68i/tools/build_options/linux_amd64_g95
MITgcm-checkpoint68i/tools/build_options/linux_amd64_gfortran
MITgcm-checkpoint68i/tools/build_options/linux_amd64_gfortran_greenplanet
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+gcc
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi_engaging
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi_stampede2_knl
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+impi_stampede2_skx
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+mpi_ice_nas
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+mpi_sal_oxford
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort+mpi_yellowstone
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort10-
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort11
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_beagle
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_discover
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_fimm_default
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_fimm_emic
MITgcm-checkpoint68i/tools/build_options/linux_amd64_ifort_uv100
MITgcm-checkpoint68i/tools/build_options/linux_amd64_open64
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pathf90
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf77
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf77+mpi_ncar
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf77+mpi_xd1
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf77_ocl
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf90+mpi_greenplanet
MITgcm-checkpoint68i/tools/build_options/linux_amd64_pgf90+mpi_xd1
MITgcm-checkpoint68i/tools/build_options/linux_amd64_sunf90
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MITgcm-checkpoint68i/tools/build_options/linux_ia32_g77
MITgcm-checkpoint68i/tools/build_options/linux_ia32_g95
MITgcm-checkpoint68i/tools/build_options/linux_ia32_gfortran
MITgcm-checkpoint68i/tools/build_options/linux_ia32_gfortran+mpi_fc_lam
MITgcm-checkpoint68i/tools/build_options/linux_ia32_ifort
MITgcm-checkpoint68i/tools/build_options/linux_ia32_ifort10.1
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MITgcm-checkpoint68i/tools/build_options/linux_ia32_lf95
MITgcm-checkpoint68i/tools/build_options/linux_ia32_open64
MITgcm-checkpoint68i/tools/build_options/linux_ia32_pathf90
MITgcm-checkpoint68i/tools/build_options/linux_ia32_pgf77
MITgcm-checkpoint68i/tools/build_options/linux_ia32_pgf77+mpi_aer
MITgcm-checkpoint68i/tools/build_options/linux_ia32_sunf90
MITgcm-checkpoint68i/tools/build_options/linux_ia64_cray_archer2
MITgcm-checkpoint68i/tools/build_options/linux_ia64_cray_cca
MITgcm-checkpoint68i/tools/build_options/linux_ia64_cray_ollie
MITgcm-checkpoint68i/tools/build_options/linux_ia64_efc
MITgcm-checkpoint68i/tools/build_options/linux_ia64_g77
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort+mpi_altix_nas
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort+mpi_swell
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort9.0+mpt_altix3700_stommel
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort_altix_jpl
MITgcm-checkpoint68i/tools/build_options/linux_ia64_ifort_ollie
MITgcm-checkpoint68i/tools/build_options/linux_ia64_open64
MITgcm-checkpoint68i/tools/build_options/linux_ia64_pgf77+mpi_cray_xt3_jaguar
MITgcm-checkpoint68i/tools/build_options/linux_ppc64_xlf
MITgcm-checkpoint68i/tools/build_options/linux_ppc_xlf
MITgcm-checkpoint68i/tools/build_options/sp5+mpi
MITgcm-checkpoint68i/tools/build_options/sp5+mpi_nas
MITgcm-checkpoint68i/tools/build_options/sp6+mpi_iblade
MITgcm-checkpoint68i/tools/build_options/sp6_ncar
MITgcm-checkpoint68i/tools/build_options/sunos_amd64_f77_awi
MITgcm-checkpoint68i/tools/build_options/sunos_i86pc_f95
MITgcm-checkpoint68i/tools/build_options/sunos_sparc_sunf90
MITgcm-checkpoint68i/tools/build_options/sunos_sparc_sunf90_m64
MITgcm-checkpoint68i/tools/build_options/sunos_sun4u_f77
MITgcm-checkpoint68i/tools/build_options/sunos_sun4u_f90
MITgcm-checkpoint68i/tools/build_options/sunos_sun4u_g77
MITgcm-checkpoint68i/tools/build_options/sunos_sun4u_mpf77+mpi_sunfire
MITgcm-checkpoint68i/tools/build_options/unsupported/
MITgcm-checkpoint68i/tools/build_options/unsupported/SUPER-UX_SX-6_sxmpif90+mpi_dkrz
MITgcm-checkpoint68i/tools/build_options/unsupported/SUPER-UX_SX-8_sxf90+mpi_awi
MITgcm-checkpoint68i/tools/build_options/unsupported/SUPER-UX_SX-8_sxf90_awi
MITgcm-checkpoint68i/tools/build_options/unsupported/ames_dbg+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/ames_opt+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/bgl_gnu_ncar
MITgcm-checkpoint68i/tools/build_options/unsupported/bgl_ncar
MITgcm-checkpoint68i/tools/build_options/unsupported/darwin_g77
MITgcm-checkpoint68i/tools/build_options/unsupported/darwin_ia32_gfortran+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/darwin_ia32_pgf95+mpich2-mx_trane
MITgcm-checkpoint68i/tools/build_options/unsupported/hp-ux
MITgcm-checkpoint68i/tools/build_options/unsupported/hp-ux+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/irix
MITgcm-checkpoint68i/tools/build_options/unsupported/irix+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/irix32
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64+ieee
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip27_f77
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip27_f77+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip27_f77+mpi_nas_turing
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip35+mpi_gfdl
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip35_f77
MITgcm-checkpoint68i/tools/build_options/unsupported/irix64_ip35_f77+mpi_mnc_gfdl
MITgcm-checkpoint68i/tools/build_options/unsupported/irix_ip30_f77
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_alpha_g77+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_gfortran+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_ifort+mpi_beagle
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_ifort+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_ifort11+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_open64+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_pathf90+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_pathf90+redhatlam
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_pgf77+mpi_ocl
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_sunf90+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_sunf90+mpi_generic+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_amd64_sunf90+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_g77+cg01
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_g77+mpi_aces
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_g77+mpi_cg01
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_gfortran+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_gfortran4.4
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifc
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifc+mpi_cg01
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort+authors
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort+mpi_aces
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort+mpi_cosmos
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort+oad
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort+oad+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort.aces
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort10.1+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort11+mpi_generic
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_ifort9_ocean
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_open64+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_open64.trapuv
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_pathf90+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_pgf77+authors_fc2
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_pgf77+authors_fc3
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_pgf77+authors_fc5
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MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_pgf77_cg01
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_sunf90+mpi_generic
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MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia32_sunf90+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_efc+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_efc+mpi_altix
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_ifort+mpi_altix_gfdl
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_ifort+mpi_altix_jpl
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_ifort+mpi_altix_meinesz
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_ifort+mpi_altix_nas_v8
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_ifort+oad
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ia64_open64+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc64_xlf+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc64_xlf_bigred
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc64_xlf_bigred+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc64_xlf_ncar
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc64_xlf_ncar+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc_xlf+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc_xlf_bigred
MITgcm-checkpoint68i/tools/build_options/unsupported/linux_ppc_xlf_bigred+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/o2
MITgcm-checkpoint68i/tools/build_options/unsupported/o2+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/o2k+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/o2k_noopt
MITgcm-checkpoint68i/tools/build_options/unsupported/o2k_noopt+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/onyx
MITgcm-checkpoint68i/tools/build_options/unsupported/onyx+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1_alpha_f77
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1_alpha_f77+mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1_alpha_g77
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1_halem
MITgcm-checkpoint68i/tools/build_options/unsupported/osf1_halem_mpi
MITgcm-checkpoint68i/tools/build_options/unsupported/sn3002
MITgcm-checkpoint68i/tools/build_options/unsupported/sn6312
MITgcm-checkpoint68i/tools/build_options/unsupported/sn7113
MITgcm-checkpoint68i/tools/build_options/unsupported/sn9735_craysv1_f90
MITgcm-checkpoint68i/tools/build_options/unsupported/sp3
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MITgcm-checkpoint68i/tools/build_options/unsupported/sp3+mpi_seaborg
MITgcm-checkpoint68i/tools/build_options/unsupported/sp3-32bit
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MITgcm-checkpoint68i/tools/build_options/unsupported/sp4+mpi_edvir1
MITgcm-checkpoint68i/tools/build_options/unsupported/sp4+mpi_jump
MITgcm-checkpoint68i/tools/build_options/unsupported/sp4-32bit
MITgcm-checkpoint68i/tools/build_options/unsupported/sp4-64bit
MITgcm-checkpoint68i/tools/build_options/unsupported/sp4_edvir1
MITgcm-checkpoint68i/tools/build_options/unsupported/sp6+mpi_ncar
MITgcm-checkpoint68i/tools/build_options/unsupported/sunos_sparc_sunf90+mpi_generic
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MITgcm-checkpoint68i/tools/build_options/unsupported/sunos_sparc_sunf90+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/sunos_sparc_sunf90_m64+mpi_generic
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MITgcm-checkpoint68i/tools/build_options/unsupported/sunos_sparc_sunf90_m64+mth
MITgcm-checkpoint68i/tools/build_options/unsupported/sv1
MITgcm-checkpoint68i/tools/build_options/unsupported/t3e
MITgcm-checkpoint68i/tools/build_options/unsupported/t90
MITgcm-checkpoint68i/tools/calc_diagnostics_dims
MITgcm-checkpoint68i/tools/ci/
MITgcm-checkpoint68i/tools/ci/README.md
MITgcm-checkpoint68i/tools/ci/docker/
MITgcm-checkpoint68i/tools/ci/docker/centos/
MITgcm-checkpoint68i/tools/ci/docker/centos/Dockerfile
MITgcm-checkpoint68i/tools/ci/docker/centos/README.md
MITgcm-checkpoint68i/tools/ci/docker/centos/pfile
MITgcm-checkpoint68i/tools/ci/docker/ubuntu_18_04_villon/
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MITgcm-checkpoint68i/tools/mpack-1.6/Changes
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MITgcm-checkpoint68i/utils/knudsen2/
MITgcm-checkpoint68i/utils/knudsen2/Makefile
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MITgcm-checkpoint68i/verification/vermix/input/
MITgcm-checkpoint68i/verification/vermix/input/Qnet_72.forcing
MITgcm-checkpoint68i/verification/vermix/input/S.doublediff
MITgcm-checkpoint68i/verification/vermix/input/S.init
MITgcm-checkpoint68i/verification/vermix/input/T.doublediff
MITgcm-checkpoint68i/verification/vermix/input/TKE.init
MITgcm-checkpoint68i/verification/vermix/input/T_26.init
MITgcm-checkpoint68i/verification/vermix/input/data
MITgcm-checkpoint68i/verification/vermix/input/data.diagnostics
MITgcm-checkpoint68i/verification/vermix/input/data.kpp
MITgcm-checkpoint68i/verification/vermix/input/data.mnc
MITgcm-checkpoint68i/verification/vermix/input/data.pkg
MITgcm-checkpoint68i/verification/vermix/input/eedata
MITgcm-checkpoint68i/verification/vermix/input/gendata.m
MITgcm-checkpoint68i/verification/vermix/input/taux_72.forcing
MITgcm-checkpoint68i/verification/vermix/input/tr_checklist
MITgcm-checkpoint68i/verification/vermix/results/
MITgcm-checkpoint68i/verification/vermix/results/output.dd.txt
MITgcm-checkpoint68i/verification/vermix/results/output.ggl90.txt
MITgcm-checkpoint68i/verification/vermix/results/output.my82.txt
MITgcm-checkpoint68i/verification/vermix/results/output.opps.txt
MITgcm-checkpoint68i/verification/vermix/results/output.pp81.txt
MITgcm-checkpoint68i/verification/vermix/results/output.txt
MITgcm-checkpoint68i/verification/vermix/run/
MITgcm-checkpoint68i/verification/vermix/run/.gitignore

[41;37m   step #5: BuildMITgcm   [0m


GENMAKE :

A program for GENerating MAKEfiles for the MITgcm project.
   For a quick list of options, use "genmake2 -h"
or for more detail see the documentation, section "Building the model"
   (under "Getting Started") at:  <a href='https://mitgcm.readthedocs.io/'>https://mitgcm.readthedocs.io/</a>

===  Processing options files and arguments  ===
  getting local config information:  none found
  getting OPTFILE information:
Warning: no OPTFILE specified so we'll look for possible settings

===  Searching for possible settings for OPTFILE  ===
  The platform appears to be:  linux_amd64
  The possible FORTRAN compilers found in your path are:  gfortran f77 f95 mpif77
  Setting OPTFILE to: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran
    using OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/build_options/linux_amd64_gfortran"
    get Compiler-version: '12'
  getting AD_OPTFILE information:
    using AD_OPTFILE="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/adjoint_options/adjoint_default"
  check Fortran Compiler...  pass  (set FC_CHECK=5/5)
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/genmake2: line 1886: echo: write error: Broken pipe
  check makedepend (local: 0, system: 1, 1)
  Turning on MPI cpp macros

===  Checking system libraries  ===
  Do we have the system() command using mpif77...  yes
  Do we have the fdate() command using mpif77...  yes
  Do we have the etime() command using mpif77... c,r: yes (SbR)
  Can we call simple C routines (here, "cloc()") using mpif77...  yes
  Can we unlimit the stack size using mpif77...  yes
  Can we register a signal handler using mpif77...  yes
  Can we use stat() through C calls...  yes
  Can we create NetCDF-enabled binaries...  no
    skip check for LAPACK Libs
  Can we call FLUSH intrinsic subroutine...  yes

===  Setting defaults  ===
  Adding MODS directories: /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code 
  Making source files in eesupp from templates
  Making source files in pkg/exch2 from templates
  Making source files in pkg/regrid from templates

===  Determining package settings  ===
  getting package dependency info from  /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_depend
  getting package groups info from      /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/pkg_groups
  checking list of packages to compile:
    using PKG_LIST="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/packages.conf"
    before group expansion packages are: gfd obcs shelfice diagnostics timeave
    replacing "gfd" with:  mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor
    after group expansion packages are:  mom_common mom_fluxform mom_vecinv generic_advdiff debug mdsio rw monitor obcs shelfice diagnostics timeave
  applying DISABLE settings
  applying ENABLE settings
    packages are:  debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave
  applying package dependency rules
    packages are:  debug diagnostics generic_advdiff mdsio mom_common mom_fluxform mom_vecinv monitor obcs rw shelfice timeave
  Adding STANDARDDIRS='eesupp model'
  Searching for *OPTIONS.h files in order to warn about the presence
    of "#define "-type statements that are no longer allowed:
    found CPP_EEOPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h"
    found CPP_OPTIONS="/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h"
  Creating the list of files for the adjoint compiler.

===  Creating the Makefile  ===
  setting INCLUDES
  Determining the list of source and include files
  Writing makefile: Makefile
  Add the source list for AD code generation
  Making list of "exceptions" that need ".p" files
  Making list of NOOPTFILES
  Add rules for links
  Adding makedepend marker

===  Done  ===
  original 'Makefile' generated successfully
=&gt; next steps:
  &gt; make depend
  &gt; make       (&lt;-- to generate executable)
make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build'
if [ ! -L cpl_issm.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/cpl_issm.F cpl_issm.F; fi
if [ ! -L do_oceanic_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/do_oceanic_phys.F do_oceanic_phys.F; fi
if [ ! -L eeboot_minimal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eeboot_minimal.F eeboot_minimal.F; fi
if [ ! -L eedie.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/eedie.F eedie.F; fi
if [ ! -L chksum_tiled.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/chksum_tiled.F chksum_tiled.F; fi
if [ ! -L debug_call.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_call.F debug_call.F; fi
if [ ! -L debug_cs_corner_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_cs_corner_uv.F debug_cs_corner_uv.F; fi
if [ ! -L debug_enter.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_enter.F debug_enter.F; fi
if [ ! -L debug_fld_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rl.F debug_fld_stats_rl.F; fi
if [ ! -L debug_fld_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_fld_stats_rs.F debug_fld_stats_rs.F; fi
if [ ! -L debug_leave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_leave.F debug_leave.F; fi
if [ ! -L debug_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_msg.F debug_msg.F; fi
if [ ! -L debug_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rl.F debug_stats_rl.F; fi
if [ ! -L debug_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/debug_stats_rs.F debug_stats_rs.F; fi
if [ ! -L fill_in_corners_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/fill_in_corners_rl.F fill_in_corners_rl.F; fi
if [ ! -L write_fullarray_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rl.F write_fullarray_rl.F; fi
if [ ! -L write_fullarray_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/write_fullarray_rs.F write_fullarray_rs.F; fi
if [ ! -L diag_calc_psivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_calc_psivel.F diag_calc_psivel.F; fi
if [ ! -L diag_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_cg2d.F diag_cg2d.F; fi
if [ ! -L diagnostics_addtolist.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_addtolist.F diagnostics_addtolist.F; fi
if [ ! -L diagnostics_calc_phivel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_calc_phivel.F diagnostics_calc_phivel.F; fi
if [ ! -L diagnostics_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_check.F diagnostics_check.F; fi
if [ ! -L diagnostics_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_clear.F diagnostics_clear.F; fi
if [ ! -L diagnostics_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill.F diagnostics_fill.F; fi
if [ ! -L diagnostics_fill_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_field.F diagnostics_fill_field.F; fi
if [ ! -L diagnostics_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_rs.F diagnostics_fill_rs.F; fi
if [ ! -L diagnostics_fill_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fill_state.F diagnostics_fill_state.F; fi
if [ ! -L diagnostics_fract_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_fract_fill.F diagnostics_fract_fill.F; fi
if [ ! -L diagnostics_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_ini_io.F diagnostics_ini_io.F; fi
if [ ! -L diagnostics_init_early.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_early.F diagnostics_init_early.F; fi
if [ ! -L diagnostics_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_fixed.F diagnostics_init_fixed.F; fi
if [ ! -L diagnostics_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_init_varia.F diagnostics_init_varia.F; fi
if [ ! -L diagnostics_interp_p2p.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_p2p.F diagnostics_interp_p2p.F; fi
if [ ! -L diagnostics_interp_vert.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_interp_vert.F diagnostics_interp_vert.F; fi
if [ ! -L diagnostics_is_on.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_is_on.F diagnostics_is_on.F; fi
if [ ! -L diagnostics_list_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_list_check.F diagnostics_list_check.F; fi
if [ ! -L diagnostics_main_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_main_init.F diagnostics_main_init.F; fi
if [ ! -L diagnostics_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_mnc_out.F diagnostics_mnc_out.F; fi
if [ ! -L diagnostics_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_out.F diagnostics_out.F; fi
if [ ! -L diagnostics_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_readparms.F diagnostics_readparms.F; fi
if [ ! -L diagnostics_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_read_pickup.F diagnostics_read_pickup.F; fi
if [ ! -L diagnostics_scale_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill.F diagnostics_scale_fill.F; fi
if [ ! -L diagnostics_scale_fill_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_scale_fill_rs.F diagnostics_scale_fill_rs.F; fi
if [ ! -L diagnostics_set_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_calc.F diagnostics_set_calc.F; fi
if [ ! -L diagnostics_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_setdiag.F diagnostics_setdiag.F; fi
if [ ! -L diagnostics_set_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_levels.F diagnostics_set_levels.F; fi
if [ ! -L diagnostics_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_set_pointers.F diagnostics_set_pointers.F; fi
if [ ! -L diagnostics_status_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_status_error.F diagnostics_status_error.F; fi
if [ ! -L diagnostics_sum_levels.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_sum_levels.F diagnostics_sum_levels.F; fi
if [ ! -L diagnostics_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_summary.F diagnostics_summary.F; fi
if [ ! -L diagnostics_switch_onoff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_switch_onoff.F diagnostics_switch_onoff.F; fi
if [ ! -L diagnostics_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_utils.F diagnostics_utils.F; fi
if [ ! -L diagnostics_write_adj.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_adj.F diagnostics_write_adj.F; fi
if [ ! -L diagnostics_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write.F diagnostics_write.F; fi
if [ ! -L diagnostics_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagnostics_write_pickup.F diagnostics_write_pickup.F; fi
if [ ! -L diagstats_ascii_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ascii_out.F diagstats_ascii_out.F; fi
if [ ! -L diagstats_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_calc.F diagstats_calc.F; fi
if [ ! -L diagstats_clear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_clear.F diagstats_clear.F; fi
if [ ! -L diagstats_close_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_close_io.F diagstats_close_io.F; fi
if [ ! -L diagstats_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_fill.F diagstats_fill.F; fi
if [ ! -L diagstats_global.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_global.F diagstats_global.F; fi
if [ ! -L diagstats_ini_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_ini_io.F diagstats_ini_io.F; fi
if [ ! -L diagstats_local.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_local.F diagstats_local.F; fi
if [ ! -L diagstats_mnc_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_mnc_out.F diagstats_mnc_out.F; fi
if [ ! -L diagstats_others_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_others_calc.F diagstats_others_calc.F; fi
if [ ! -L diagstats_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_output.F diagstats_output.F; fi
if [ ! -L diagstats_setdiag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_setdiag.F diagstats_setdiag.F; fi
if [ ! -L diagstats_set_pointers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_pointers.F diagstats_set_pointers.F; fi
if [ ! -L diagstats_set_regions.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diagstats_set_regions.F diagstats_set_regions.F; fi
if [ ! -L diag_vegtile_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/diag_vegtile_fill.F diag_vegtile_fill.F; fi
if [ ! -L gad_advection.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advection.F gad_advection.F; fi
if [ ! -L gad_advscheme.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_advscheme.F gad_advscheme.F; fi
if [ ! -L gad_biharm_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_r.F gad_biharm_r.F; fi
if [ ! -L gad_biharm_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_x.F gad_biharm_x.F; fi
if [ ! -L gad_biharm_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_biharm_y.F gad_biharm_y.F; fi
if [ ! -L gad_c2_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_r.F gad_c2_adv_r.F; fi
if [ ! -L gad_c2_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_x.F gad_c2_adv_x.F; fi
if [ ! -L gad_c2_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_adv_y.F gad_c2_adv_y.F; fi
if [ ! -L gad_c2_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c2_impl_r.F gad_c2_impl_r.F; fi
if [ ! -L gad_c4_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_r.F gad_c4_adv_r.F; fi
if [ ! -L gad_c4_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_x.F gad_c4_adv_x.F; fi
if [ ! -L gad_c4_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_c4_adv_y.F gad_c4_adv_y.F; fi
if [ ! -L gad_calc_rhs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_calc_rhs.F gad_calc_rhs.F; fi
if [ ! -L gad_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_check.F gad_check.F; fi
if [ ! -L gad_del2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_del2.F gad_del2.F; fi
if [ ! -L gad_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_init.F gad_diagnostics_init.F; fi
if [ ! -L gad_diagnostics_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diagnostics_state.F gad_diagnostics_state.F; fi
if [ ! -L gad_diff_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_r.F gad_diff_r.F; fi
if [ ! -L gad_diff_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_x.F gad_diff_x.F; fi
if [ ! -L gad_diff_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_diff_y.F gad_diff_y.F; fi
if [ ! -L gad_dst2u1_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_r.F gad_dst2u1_adv_r.F; fi
if [ ! -L gad_dst2u1_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_x.F gad_dst2u1_adv_x.F; fi
if [ ! -L gad_dst2u1_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_adv_y.F gad_dst2u1_adv_y.F; fi
if [ ! -L gad_dst2u1_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst2u1_impl_r.F gad_dst2u1_impl_r.F; fi
if [ ! -L gad_dst3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_r.F gad_dst3_adv_r.F; fi
if [ ! -L gad_dst3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_x.F gad_dst3_adv_x.F; fi
if [ ! -L gad_dst3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3_adv_y.F gad_dst3_adv_y.F; fi
if [ ! -L gad_dst3fl_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_r.F gad_dst3fl_adv_r.F; fi
if [ ! -L gad_dst3fl_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_x.F gad_dst3fl_adv_x.F; fi
if [ ! -L gad_dst3fl_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_adv_y.F gad_dst3fl_adv_y.F; fi
if [ ! -L gad_dst3fl_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_dst3fl_impl_r.F gad_dst3fl_impl_r.F; fi
if [ ! -L gad_exch_som.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_exch_som.F gad_exch_som.F; fi
if [ ! -L gad_fluxlimit_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_r.F gad_fluxlimit_adv_r.F; fi
if [ ! -L gad_fluxlimit_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_x.F gad_fluxlimit_adv_x.F; fi
if [ ! -L gad_fluxlimit_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_adv_y.F gad_fluxlimit_adv_y.F; fi
if [ ! -L gad_fluxlimit_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_fluxlimit_impl_r.F gad_fluxlimit_impl_r.F; fi
if [ ! -L gad_grad_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_x.F gad_grad_x.F; fi
if [ ! -L gad_grad_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_grad_y.F gad_grad_y.F; fi
if [ ! -L gad_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_implicit_r.F gad_implicit_r.F; fi
if [ ! -L gad_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_fixed.F gad_init_fixed.F; fi
if [ ! -L gad_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_init_varia.F gad_init_varia.F; fi
if [ ! -L gad_os7mp_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_r.F gad_os7mp_adv_r.F; fi
if [ ! -L gad_os7mp_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_x.F gad_os7mp_adv_x.F; fi
if [ ! -L gad_os7mp_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_os7mp_adv_y.F gad_os7mp_adv_y.F; fi
if [ ! -L gad_osc_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_r.F gad_osc_hat_r.F; fi
if [ ! -L gad_osc_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_x.F gad_osc_hat_x.F; fi
if [ ! -L gad_osc_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_hat_y.F gad_osc_hat_y.F; fi
if [ ! -L gad_osc_mul_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_r.F gad_osc_mul_r.F; fi
if [ ! -L gad_osc_mul_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_x.F gad_osc_mul_x.F; fi
if [ ! -L gad_osc_mul_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_osc_mul_y.F gad_osc_mul_y.F; fi
if [ ! -L gad_plm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_plm_fun.F gad_plm_fun.F; fi
if [ ! -L gad_ppm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_r.F gad_ppm_adv_r.F; fi
if [ ! -L gad_ppm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_x.F gad_ppm_adv_x.F; fi
if [ ! -L gad_ppm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_adv_y.F gad_ppm_adv_y.F; fi
if [ ! -L gad_ppm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_r.F gad_ppm_flx_r.F; fi
if [ ! -L gad_ppm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_x.F gad_ppm_flx_x.F; fi
if [ ! -L gad_ppm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_flx_y.F gad_ppm_flx_y.F; fi
if [ ! -L gad_ppm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_fun.F gad_ppm_fun.F; fi
if [ ! -L gad_ppm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_r.F gad_ppm_hat_r.F; fi
if [ ! -L gad_ppm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_x.F gad_ppm_hat_x.F; fi
if [ ! -L gad_ppm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_hat_y.F gad_ppm_hat_y.F; fi
if [ ! -L gad_ppm_p3e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_r.F gad_ppm_p3e_r.F; fi
if [ ! -L gad_ppm_p3e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_x.F gad_ppm_p3e_x.F; fi
if [ ! -L gad_ppm_p3e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ppm_p3e_y.F gad_ppm_p3e_y.F; fi
if [ ! -L gad_pqm_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_r.F gad_pqm_adv_r.F; fi
if [ ! -L gad_pqm_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_x.F gad_pqm_adv_x.F; fi
if [ ! -L gad_pqm_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_adv_y.F gad_pqm_adv_y.F; fi
if [ ! -L gad_pqm_flx_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_r.F gad_pqm_flx_r.F; fi
if [ ! -L gad_pqm_flx_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_x.F gad_pqm_flx_x.F; fi
if [ ! -L gad_pqm_flx_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_flx_y.F gad_pqm_flx_y.F; fi
if [ ! -L gad_pqm_fun.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_fun.F gad_pqm_fun.F; fi
if [ ! -L gad_pqm_hat_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_r.F gad_pqm_hat_r.F; fi
if [ ! -L gad_pqm_hat_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_x.F gad_pqm_hat_x.F; fi
if [ ! -L gad_pqm_hat_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_hat_y.F gad_pqm_hat_y.F; fi
if [ ! -L gad_pqm_p5e_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_r.F gad_pqm_p5e_r.F; fi
if [ ! -L gad_pqm_p5e_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_x.F gad_pqm_p5e_x.F; fi
if [ ! -L gad_pqm_p5e_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_pqm_p5e_y.F gad_pqm_p5e_y.F; fi
if [ ! -L gad_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_read_pickup.F gad_read_pickup.F; fi
if [ ! -L gad_som_advect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_advect.F gad_som_advect.F; fi
if [ ! -L gad_som_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_r.F gad_som_adv_r.F; fi
if [ ! -L gad_som_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_x.F gad_som_adv_x.F; fi
if [ ! -L gad_som_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_adv_y.F gad_som_adv_y.F; fi
if [ ! -L gad_som_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_exchanges.F gad_som_exchanges.F; fi
if [ ! -L gad_som_fill_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_fill_cs_corner.F gad_som_fill_cs_corner.F; fi
if [ ! -L gad_som_lim_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_lim_r.F gad_som_lim_r.F; fi
if [ ! -L gad_som_prep_cs_corner.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_som_prep_cs_corner.F gad_som_prep_cs_corner.F; fi
if [ ! -L gad_u3_adv_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_r.F gad_u3_adv_r.F; fi
if [ ! -L gad_u3_adv_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_x.F gad_u3_adv_x.F; fi
if [ ! -L gad_u3_adv_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3_adv_y.F gad_u3_adv_y.F; fi
if [ ! -L gad_u3c4_impl_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_u3c4_impl_r.F gad_u3c4_impl_r.F; fi
if [ ! -L gad_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_write_pickup.F gad_write_pickup.F; fi
if [ ! -L salt_fill.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/salt_fill.F salt_fill.F; fi
if [ ! -L mdsio_buffertorl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertorl.F mdsio_buffertorl.F; fi
if [ ! -L mdsio_buffertors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_buffertors.F mdsio_buffertors.F; fi
if [ ! -L mdsio_check4file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_check4file.F mdsio_check4file.F; fi
if [ ! -L mdsio_facef_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_facef_read.F mdsio_facef_read.F; fi
if [ ! -L mdsio_gl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl.F mdsio_gl.F; fi
if [ ! -L mdsio_gl_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_gl_slice.F mdsio_gl_slice.F; fi
if [ ! -L mdsio_pass_r4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4torl.F mdsio_pass_r4torl.F; fi
if [ ! -L mdsio_pass_r4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r4tors.F mdsio_pass_r4tors.F; fi
if [ ! -L mdsio_pass_r8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8torl.F mdsio_pass_r8torl.F; fi
if [ ! -L mdsio_pass_r8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_pass_r8tors.F mdsio_pass_r8tors.F; fi
if [ ! -L mdsio_rd_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rl.F mdsio_rd_rec_rl.F; fi
if [ ! -L mdsio_rd_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rd_rec_rs.F mdsio_rd_rec_rs.F; fi
if [ ! -L mdsio_read_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_field.F mdsio_read_field.F; fi
if [ ! -L mdsio_read_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_meta.F mdsio_read_meta.F; fi
if [ ! -L mdsio_read_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_section.F mdsio_read_section.F; fi
if [ ! -L mdsio_read_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_tape.F mdsio_read_tape.F; fi
if [ ! -L mdsio_readvec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_readvec_loc.F mdsio_readvec_loc.F; fi
if [ ! -L mdsio_read_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_read_whalos.F mdsio_read_whalos.F; fi
if [ ! -L mdsio_rw_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_field.F mdsio_rw_field.F; fi
if [ ! -L mdsio_rw_slice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_rw_slice.F mdsio_rw_slice.F; fi
if [ ! -L mdsio_seg4torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4torl.F mdsio_seg4torl.F; fi
if [ ! -L mdsio_seg4tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg4tors.F mdsio_seg4tors.F; fi
if [ ! -L mdsio_seg8torl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8torl.F mdsio_seg8torl.F; fi
if [ ! -L mdsio_seg8tors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_seg8tors.F mdsio_seg8tors.F; fi
if [ ! -L mdsio_segxtorx_2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_segxtorx_2d.F mdsio_segxtorx_2d.F; fi
if [ ! -L mdsio_write_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_field.F mdsio_write_field.F; fi
if [ ! -L mdsio_writelocal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writelocal.F mdsio_writelocal.F; fi
if [ ! -L mdsio_write_meta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_meta.F mdsio_write_meta.F; fi
if [ ! -L mdsio_write_section.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_section.F mdsio_write_section.F; fi
if [ ! -L mdsio_write_tape.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_tape.F mdsio_write_tape.F; fi
if [ ! -L mdsio_writevec_loc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_writevec_loc.F mdsio_writevec_loc.F; fi
if [ ! -L mdsio_write_whalos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_write_whalos.F mdsio_write_whalos.F; fi
if [ ! -L mdsio_wr_metafiles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_metafiles.F mdsio_wr_metafiles.F; fi
if [ ! -L mdsio_wr_rec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rl.F mdsio_wr_rec_rl.F; fi
if [ ! -L mdsio_wr_rec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/mdsio_wr_rec_rs.F mdsio_wr_rec_rs.F; fi
if [ ! -L mom_calc_3d_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_3d_strain.F mom_calc_3d_strain.F; fi
if [ ! -L mom_calc_absvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_absvort3.F mom_calc_absvort3.F; fi
if [ ! -L mom_calc_hdiv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hdiv.F mom_calc_hdiv.F; fi
if [ ! -L mom_calc_hfacz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_hfacz.F mom_calc_hfacz.F; fi
if [ ! -L mom_calc_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_ke.F mom_calc_ke.F; fi
if [ ! -L mom_calc_relvort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_relvort3.F mom_calc_relvort3.F; fi
if [ ! -L mom_calc_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_smag_3d.F mom_calc_smag_3d.F; fi
if [ ! -L mom_calc_strain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_strain.F mom_calc_strain.F; fi
if [ ! -L mom_calc_tension.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_tension.F mom_calc_tension.F; fi
if [ ! -L mom_calc_visc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_calc_visc.F mom_calc_visc.F; fi
if [ ! -L mom_diagnostics_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_diagnostics_init.F mom_diagnostics_init.F; fi
if [ ! -L mom_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_hdissip.F mom_hdissip.F; fi
if [ ! -L mom_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_init_fixed.F mom_init_fixed.F; fi
if [ ! -L mom_quasihydrostatic.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_quasihydrostatic.F mom_quasihydrostatic.F; fi
if [ ! -L mom_u_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_botdrag_coeff.F mom_u_botdrag_coeff.F; fi
if [ ! -L mom_u_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_coriolis_nh.F mom_u_coriolis_nh.F; fi
if [ ! -L mom_u_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_implicit_r.F mom_u_implicit_r.F; fi
if [ ! -L mom_u_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_metric_nh.F mom_u_metric_nh.F; fi
if [ ! -L mom_u_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_rviscflux.F mom_u_rviscflux.F; fi
if [ ! -L mom_u_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_u_sidedrag.F mom_u_sidedrag.F; fi
if [ ! -L mom_uv_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_uv_smag_3d.F mom_uv_smag_3d.F; fi
if [ ! -L mom_v_botdrag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_botdrag_coeff.F mom_v_botdrag_coeff.F; fi
if [ ! -L mom_v_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_coriolis_nh.F mom_v_coriolis_nh.F; fi
if [ ! -L mom_v_implicit_r.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_implicit_r.F mom_v_implicit_r.F; fi
if [ ! -L mom_visc_qgl_limit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_limit.F mom_visc_qgl_limit.F; fi
if [ ! -L mom_visc_qgl_stretch.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_visc_qgl_stretch.F mom_visc_qgl_stretch.F; fi
if [ ! -L mom_v_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_metric_nh.F mom_v_metric_nh.F; fi
if [ ! -L mom_v_rviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_rviscflux.F mom_v_rviscflux.F; fi
if [ ! -L mom_v_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_v_sidedrag.F mom_v_sidedrag.F; fi
if [ ! -L mom_w_coriolis_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_coriolis_nh.F mom_w_coriolis_nh.F; fi
if [ ! -L mom_w_metric_nh.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_metric_nh.F mom_w_metric_nh.F; fi
if [ ! -L mom_w_sidedrag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_sidedrag.F mom_w_sidedrag.F; fi
if [ ! -L mom_w_smag_3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/mom_w_smag_3d.F mom_w_smag_3d.F; fi
if [ ! -L mom_calc_rtrans.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_calc_rtrans.F mom_calc_rtrans.F; fi
if [ ! -L mom_fluxform.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_fluxform.F mom_fluxform.F; fi
if [ ! -L mom_u_adv_uu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_uu.F mom_u_adv_uu.F; fi
if [ ! -L mom_u_adv_vu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_vu.F mom_u_adv_vu.F; fi
if [ ! -L mom_u_adv_wu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_adv_wu.F mom_u_adv_wu.F; fi
if [ ! -L mom_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_coriolis.F mom_u_coriolis.F; fi
if [ ! -L mom_u_del2u.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_del2u.F mom_u_del2u.F; fi
if [ ! -L mom_u_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_cylinder.F mom_u_metric_cylinder.F; fi
if [ ! -L mom_u_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_metric_sphere.F mom_u_metric_sphere.F; fi
if [ ! -L mom_uv_boundary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_uv_boundary.F mom_uv_boundary.F; fi
if [ ! -L mom_u_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_xviscflux.F mom_u_xviscflux.F; fi
if [ ! -L mom_u_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_u_yviscflux.F mom_u_yviscflux.F; fi
if [ ! -L mom_v_adv_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_uv.F mom_v_adv_uv.F; fi
if [ ! -L mom_v_adv_vv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_vv.F mom_v_adv_vv.F; fi
if [ ! -L mom_v_adv_wv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_adv_wv.F mom_v_adv_wv.F; fi
if [ ! -L mom_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_coriolis.F mom_v_coriolis.F; fi
if [ ! -L mom_v_del2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_del2v.F mom_v_del2v.F; fi
if [ ! -L mom_v_metric_cylinder.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_cylinder.F mom_v_metric_cylinder.F; fi
if [ ! -L mom_v_metric_sphere.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_metric_sphere.F mom_v_metric_sphere.F; fi
if [ ! -L mom_v_xviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_xviscflux.F mom_v_xviscflux.F; fi
if [ ! -L mom_v_yviscflux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/mom_v_yviscflux.F mom_v_yviscflux.F; fi
if [ ! -L mom_vecinv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vecinv.F mom_vecinv.F; fi
if [ ! -L mom_vi_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_coriolis.F mom_vi_coriolis.F; fi
if [ ! -L mom_vi_del2uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_del2uv.F mom_vi_del2uv.F; fi
if [ ! -L mom_vi_hdissip.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_hdissip.F mom_vi_hdissip.F; fi
if [ ! -L mom_vi_u_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis_c4.F mom_vi_u_coriolis_c4.F; fi
if [ ! -L mom_vi_u_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_coriolis.F mom_vi_u_coriolis.F; fi
if [ ! -L mom_vi_u_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_grad_ke.F mom_vi_u_grad_ke.F; fi
if [ ! -L mom_vi_u_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_u_vertshear.F mom_vi_u_vertshear.F; fi
if [ ! -L mom_vi_v_coriolis_c4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis_c4.F mom_vi_v_coriolis_c4.F; fi
if [ ! -L mom_vi_v_coriolis.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_coriolis.F mom_vi_v_coriolis.F; fi
if [ ! -L mom_vi_v_grad_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_grad_ke.F mom_vi_v_grad_ke.F; fi
if [ ! -L mom_vi_v_vertshear.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/mom_vi_v_vertshear.F mom_vi_v_vertshear.F; fi
if [ ! -L mon_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcfl.F mon_advcfl.F; fi
if [ ! -L mon_advcflw2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw2.F mon_advcflw2.F; fi
if [ ! -L mon_advcflw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_advcflw.F mon_advcflw.F; fi
if [ ! -L mon_calc_advcfl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_advcfl.F mon_calc_advcfl.F; fi
if [ ! -L mon_calc_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rl.F mon_calc_stats_rl.F; fi
if [ ! -L mon_calc_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_calc_stats_rs.F mon_calc_stats_rs.F; fi
if [ ! -L mon_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_init.F mon_init.F; fi
if [ ! -L monitor_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_ad.F monitor_ad.F; fi
if [ ! -L monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor.F monitor.F; fi
if [ ! -L monitor_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/monitor_g.F monitor_g.F; fi
if [ ! -L mon_ke.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_ke.F mon_ke.F; fi
if [ ! -L mon_out.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_out.F mon_out.F; fi
if [ ! -L mon_printstats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rl.F mon_printstats_rl.F; fi
if [ ! -L mon_printstats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_printstats_rs.F mon_printstats_rs.F; fi
if [ ! -L mon_set_iounit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_iounit.F mon_set_iounit.F; fi
if [ ! -L mon_set_pref.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_set_pref.F mon_set_pref.F; fi
if [ ! -L mon_solution.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_solution.F mon_solution.F; fi
if [ ! -L mon_stats_latbnd_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_latbnd_rl.F mon_stats_latbnd_rl.F; fi
if [ ! -L mon_stats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rl.F mon_stats_rl.F; fi
if [ ! -L mon_stats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_stats_rs.F mon_stats_rs.F; fi
if [ ! -L mon_surfcor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_surfcor.F mon_surfcor.F; fi
if [ ! -L mon_vort3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_vort3.F mon_vort3.F; fi
if [ ! -L mon_writestats_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rl.F mon_writestats_rl.F; fi
if [ ! -L mon_writestats_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/mon_writestats_rs.F mon_writestats_rs.F; fi
if [ ! -L obcs_add_tides.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_add_tides.F obcs_add_tides.F; fi
if [ ! -L obcs_adjust.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust.F obcs_adjust.F; fi
if [ ! -L obcs_adjust_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_adjust_uvice.F obcs_adjust_uvice.F; fi
if [ ! -L obcs_apply_eta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_eta.F obcs_apply_eta.F; fi
if [ ! -L obcs_apply_ptracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ptracer.F obcs_apply_ptracer.F; fi
if [ ! -L obcs_apply_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_r_star.F obcs_apply_r_star.F; fi
if [ ! -L obcs_apply_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_seaice.F obcs_apply_seaice.F; fi
if [ ! -L obcs_apply_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_surf_dr.F obcs_apply_surf_dr.F; fi
if [ ! -L obcs_apply_ts.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_ts.F obcs_apply_ts.F; fi
if [ ! -L obcs_apply_uv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uv.F obcs_apply_uv.F; fi
if [ ! -L obcs_apply_uvice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_uvice.F obcs_apply_uvice.F; fi
if [ ! -L obcs_apply_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_apply_w.F obcs_apply_w.F; fi
if [ ! -L obcs_balance_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_balance_flow.F obcs_balance_flow.F; fi
if [ ! -L obcs_calc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc.F obcs_calc.F; fi
if [ ! -L obcs_calc_stevens.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_calc_stevens.F obcs_calc_stevens.F; fi
if [ ! -L obcs_check_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check_depths.F obcs_check_depths.F; fi
if [ ! -L obcs_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_check.F obcs_check.F; fi
if [ ! -L obcs_copy_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_tracer.F obcs_copy_tracer.F; fi
if [ ! -L obcs_copy_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_copy_uv_n.F obcs_copy_uv_n.F; fi
if [ ! -L obcs_diag_balance.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_diag_balance.F obcs_diag_balance.F; fi
if [ ! -L obcs_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exchanges.F obcs_exchanges.F; fi
if [ ! -L obcs_exf_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_exf_load.F obcs_exf_load.F; fi
if [ ! -L obcs_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_fields_load.F obcs_fields_load.F; fi
if [ ! -L obcs_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_fixed.F obcs_init_fixed.F; fi
if [ ! -L obcs_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_init_variables.F obcs_init_variables.F; fi
if [ ! -L obcs_monitor.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_monitor.F obcs_monitor.F; fi
if [ ! -L obcs_mon_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_mon_stats.F obcs_mon_stats.F; fi
if [ ! -L obcs_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_output.F obcs_output.F; fi
if [ ! -L obcs_prescribe_read.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_prescribe_read.F obcs_prescribe_read.F; fi
if [ ! -L obcs_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_readparms.F obcs_readparms.F; fi
if [ ! -L obcs_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_read_pickup.F obcs_read_pickup.F; fi
if [ ! -L obcs_save_uv_n.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_save_uv_n.F obcs_save_uv_n.F; fi
if [ ! -L obcs_seaice_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_seaice_sponge.F obcs_seaice_sponge.F; fi
if [ ! -L obcs_set_connect.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_set_connect.F obcs_set_connect.F; fi
if [ ! -L obcs_sponge.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_sponge.F obcs_sponge.F; fi
if [ ! -L obcs_u1_adv_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_u1_adv_tracer.F obcs_u1_adv_tracer.F; fi
if [ ! -L obcs_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_write_pickup.F obcs_write_pickup.F; fi
if [ ! -L orlanski_east.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_east.F orlanski_east.F; fi
if [ ! -L orlanski_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_init.F orlanski_init.F; fi
if [ ! -L orlanski_north.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_north.F orlanski_north.F; fi
if [ ! -L orlanski_south.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_south.F orlanski_south.F; fi
if [ ! -L orlanski_west.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/orlanski_west.F orlanski_west.F; fi
if [ ! -L get_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/get_write_global_fld.F get_write_global_fld.F; fi
if [ ! -L read_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rl.F read_fld_xy_rl.F; fi
if [ ! -L read_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xy_rs.F read_fld_xy_rs.F; fi
if [ ! -L read_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rl.F read_fld_xyz_rl.F; fi
if [ ! -L read_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_fld_xyz_rs.F read_fld_xyz_rs.F; fi
if [ ! -L read_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rl.F read_glvec_rl.F; fi
if [ ! -L read_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_glvec_rs.F read_glvec_rs.F; fi
if [ ! -L read_mflds.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_mflds.F read_mflds.F; fi
if [ ! -L read_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/read_rec.F read_rec.F; fi
if [ ! -L rw_get_suffix.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/rw_get_suffix.F rw_get_suffix.F; fi
if [ ! -L set_write_global_fld.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/set_write_global_fld.F set_write_global_fld.F; fi
if [ ! -L write_fld_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rl.F write_fld_3d_rl.F; fi
if [ ! -L write_fld_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_3d_rs.F write_fld_3d_rs.F; fi
if [ ! -L write_fld_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rl.F write_fld_s3d_rl.F; fi
if [ ! -L write_fld_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_s3d_rs.F write_fld_s3d_rs.F; fi
if [ ! -L write_fld_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rl.F write_fld_xy_rl.F; fi
if [ ! -L write_fld_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xy_rs.F write_fld_xy_rs.F; fi
if [ ! -L write_fld_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rl.F write_fld_xyz_rl.F; fi
if [ ! -L write_fld_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_fld_xyz_rs.F write_fld_xyz_rs.F; fi
if [ ! -L write_glvec_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rl.F write_glvec_rl.F; fi
if [ ! -L write_glvec_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_glvec_rs.F write_glvec_rs.F; fi
if [ ! -L write_local_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rl.F write_local_rl.F; fi
if [ ! -L write_local_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_local_rs.F write_local_rs.F; fi
if [ ! -L write_rec.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/write_rec.F write_rec.F; fi
if [ ! -L shelfice_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_check.F shelfice_check.F; fi
if [ ! -L shelfice_cost_accumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_accumulate.F shelfice_cost_accumulate.F; fi
if [ ! -L shelfice_cost_final.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_final.F shelfice_cost_final.F; fi
if [ ! -L shelfice_cost_shifwflx.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_cost_shifwflx.F shelfice_cost_shifwflx.F; fi
if [ ! -L shelfice_diagnostics_drag.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_diagnostics_drag.F shelfice_diagnostics_drag.F; fi
if [ ! -L shelfice_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing.F shelfice_forcing.F; fi
if [ ! -L shelfice_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_forcing_surf.F shelfice_forcing_surf.F; fi
if [ ! -L shelfice_init_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_depths.F shelfice_init_depths.F; fi
if [ ! -L shelfice_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_fixed.F shelfice_init_fixed.F; fi
if [ ! -L shelfice_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_init_varia.F shelfice_init_varia.F; fi
if [ ! -L shelfice_mask_seaice.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mask_seaice.F shelfice_mask_seaice.F; fi
if [ ! -L shelfice_mnc_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_mnc_init.F shelfice_mnc_init.F; fi
if [ ! -L shelfice_output.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_output.F shelfice_output.F; fi
if [ ! -L shelfice_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_readparms.F shelfice_readparms.F; fi
if [ ! -L shelfice_read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_read_pickup.F shelfice_read_pickup.F; fi
if [ ! -L shelfice_remesh_calc_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_calc_w.F shelfice_remesh_calc_w.F; fi
if [ ! -L shelfice_remesh_c_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_c_mask.F shelfice_remesh_c_mask.F; fi
if [ ! -L shelfice_remeshing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remeshing.F shelfice_remeshing.F; fi
if [ ! -L shelfice_remesh_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_state.F shelfice_remesh_state.F; fi
if [ ! -L shelfice_remesh_uv_mask.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_remesh_uv_mask.F shelfice_remesh_uv_mask.F; fi
if [ ! -L shelfice_step_icemass.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_step_icemass.F shelfice_step_icemass.F; fi
if [ ! -L shelfice_thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_thermodynamics.F shelfice_thermodynamics.F; fi
if [ ! -L shelfice_u_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_u_drag_coeff.F shelfice_u_drag_coeff.F; fi
if [ ! -L shelfice_v_drag_coeff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_v_drag_coeff.F shelfice_v_drag_coeff.F; fi
if [ ! -L shelfice_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_write_pickup.F shelfice_write_pickup.F; fi
if [ ! -L timeave_cumul_1k1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1k1t.F timeave_cumul_1k1t.F; fi
if [ ! -L timeave_cumul_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1t.F timeave_cumul_1t.F; fi
if [ ! -L timeave_cumul_1vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_1vfc.F timeave_cumul_1vfc.F; fi
if [ ! -L timeave_cumul_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2v.F timeave_cumul_2v.F; fi
if [ ! -L timeave_cumul_2vfc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_2vfc.F timeave_cumul_2vfc.F; fi
if [ ! -L timeave_cumulate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumulate.F timeave_cumulate.F; fi
if [ ! -L timeave_cumul_dif_1t.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_cumul_dif_1t.F timeave_cumul_dif_1t.F; fi
if [ ! -L timeave_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_init_fixed.F timeave_init_fixed.F; fi
if [ ! -L timeave_norma_2v.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_norma_2v.F timeave_norma_2v.F; fi
if [ ! -L timeave_normalize.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_normalize.F timeave_normalize.F; fi
if [ ! -L timeave_reset.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_reset.F timeave_reset.F; fi
if [ ! -L timeave_statvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statvars.F timeave_statvars.F; fi
if [ ! -L timeave_statv_write.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_statv_write.F timeave_statv_write.F; fi
if [ ! -L timeave_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/timeave_surf_flux.F timeave_surf_flux.F; fi
if [ ! -L all_proc_die.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/all_proc_die.F all_proc_die.F; fi
if [ ! -L bar2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar2.F bar2.F; fi
if [ ! -L bar_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/bar_check.F bar_check.F; fi
if [ ! -L barrier.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/barrier.F barrier.F; fi
if [ ! -L check_threads.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/check_threads.F check_threads.F; fi
if [ ! -L comm_stats.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/comm_stats.F comm_stats.F; fi
if [ ! -L cumulsum_z_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/cumulsum_z_tile.F cumulsum_z_tile.F; fi
if [ ! -L different_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/different_multiple.F different_multiple.F; fi
if [ ! -L diff_phase_multiple.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/diff_phase_multiple.F diff_phase_multiple.F; fi
if [ ! -L eeboot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeboot.F eeboot.F; fi
if [ ! -L eedata_example.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eedata_example.F eedata_example.F; fi
if [ ! -L eeintro_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeintro_msg.F eeintro_msg.F; fi
if [ ! -L eeset_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eeset_parms.F eeset_parms.F; fi
if [ ! -L eewrite_eeenv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/eewrite_eeenv.F eewrite_eeenv.F; fi
if [ ! -L exch0_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r4.F exch0_r4.F; fi
if [ ! -L exch0_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_r8.F exch0_r8.F; fi
if [ ! -L exch0_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rl.F exch0_rl.F; fi
if [ ! -L exch0_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch0_rs.F exch0_rs.F; fi
if [ ! -L exch1_bg_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r4_cube.F exch1_bg_r4_cube.F; fi
if [ ! -L exch1_bg_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_r8_cube.F exch1_bg_r8_cube.F; fi
if [ ! -L exch1_bg_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rl_cube.F exch1_bg_rl_cube.F; fi
if [ ! -L exch1_bg_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_bg_rs_cube.F exch1_bg_rs_cube.F; fi
if [ ! -L exch1_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4_cube.F exch1_r4_cube.F; fi
if [ ! -L exch1_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r4.F exch1_r4.F; fi
if [ ! -L exch1_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8_cube.F exch1_r8_cube.F; fi
if [ ! -L exch1_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_r8.F exch1_r8.F; fi
if [ ! -L exch1_rl_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_ad.F exch1_rl_ad.F; fi
if [ ! -L exch1_rl_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube_ad.F exch1_rl_cube_ad.F; fi
if [ ! -L exch1_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl_cube.F exch1_rl_cube.F; fi
if [ ! -L exch1_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rl.F exch1_rl.F; fi
if [ ! -L exch1_rs_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_ad.F exch1_rs_ad.F; fi
if [ ! -L exch1_rs_cube_ad.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube_ad.F exch1_rs_cube_ad.F; fi
if [ ! -L exch1_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs_cube.F exch1_rs_cube.F; fi
if [ ! -L exch1_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_rs.F exch1_rs.F; fi
if [ ! -L exch1_uv_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r4_cube.F exch1_uv_r4_cube.F; fi
if [ ! -L exch1_uv_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_r8_cube.F exch1_uv_r8_cube.F; fi
if [ ! -L exch1_uv_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rl_cube.F exch1_uv_rl_cube.F; fi
if [ ! -L exch1_uv_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_uv_rs_cube.F exch1_uv_rs_cube.F; fi
if [ ! -L exch1_z_r4_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r4_cube.F exch1_z_r4_cube.F; fi
if [ ! -L exch1_z_r8_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_r8_cube.F exch1_z_r8_cube.F; fi
if [ ! -L exch1_z_rl_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rl_cube.F exch1_z_rl_cube.F; fi
if [ ! -L exch1_z_rs_cube.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch1_z_rs_cube.F exch1_z_rs_cube.F; fi
if [ ! -L exch_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r4.F exch_3d_r4.F; fi
if [ ! -L exch_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_r8.F exch_3d_r8.F; fi
if [ ! -L exch_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rl.F exch_3d_rl.F; fi
if [ ! -L exch_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_3d_rs.F exch_3d_rs.F; fi
if [ ! -L exch_cycle_ebl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_cycle_ebl.F exch_cycle_ebl.F; fi
if [ ! -L exch_init.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_init.F exch_init.F; fi
if [ ! -L exch_r4_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_x.F exch_r4_recv_get_x.F; fi
if [ ! -L exch_r4_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_recv_get_y.F exch_r4_recv_get_y.F; fi
if [ ! -L exch_r4_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_x.F exch_r4_send_put_x.F; fi
if [ ! -L exch_r4_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r4_send_put_y.F exch_r4_send_put_y.F; fi
if [ ! -L exch_r8_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_x.F exch_r8_recv_get_x.F; fi
if [ ! -L exch_r8_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_recv_get_y.F exch_r8_recv_get_y.F; fi
if [ ! -L exch_r8_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_x.F exch_r8_send_put_x.F; fi
if [ ! -L exch_r8_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_r8_send_put_y.F exch_r8_send_put_y.F; fi
if [ ! -L exch_rl_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_x.F exch_rl_recv_get_x.F; fi
if [ ! -L exch_rl_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_recv_get_y.F exch_rl_recv_get_y.F; fi
if [ ! -L exch_rl_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_x.F exch_rl_send_put_x.F; fi
if [ ! -L exch_rl_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rl_send_put_y.F exch_rl_send_put_y.F; fi
if [ ! -L exch_rs_recv_get_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_x.F exch_rs_recv_get_x.F; fi
if [ ! -L exch_rs_recv_get_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_recv_get_y.F exch_rs_recv_get_y.F; fi
if [ ! -L exch_rs_send_put_x.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_x.F exch_rs_send_put_x.F; fi
if [ ! -L exch_rs_send_put_y.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_rs_send_put_y.F exch_rs_send_put_y.F; fi
if [ ! -L exch_s3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r4.F exch_s3d_r4.F; fi
if [ ! -L exch_s3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_r8.F exch_s3d_r8.F; fi
if [ ! -L exch_s3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rl.F exch_s3d_rl.F; fi
if [ ! -L exch_s3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_s3d_rs.F exch_s3d_rs.F; fi
if [ ! -L exch_sm_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r4.F exch_sm_3d_r4.F; fi
if [ ! -L exch_sm_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_r8.F exch_sm_3d_r8.F; fi
if [ ! -L exch_sm_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rl.F exch_sm_3d_rl.F; fi
if [ ! -L exch_sm_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_sm_3d_rs.F exch_sm_3d_rs.F; fi
if [ ! -L exch_uv_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r4.F exch_uv_3d_r4.F; fi
if [ ! -L exch_uv_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_r8.F exch_uv_3d_r8.F; fi
if [ ! -L exch_uv_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rl.F exch_uv_3d_rl.F; fi
if [ ! -L exch_uv_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_3d_rs.F exch_uv_3d_rs.F; fi
if [ ! -L exch_uv_agrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r4.F; fi
if [ ! -L exch_uv_agrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_r8.F; fi
if [ ! -L exch_uv_agrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rl.F; fi
if [ ! -L exch_uv_agrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_agrid_3d_rs.F exch_uv_agrid_3d_rs.F; fi
if [ ! -L exch_uv_bgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r4.F; fi
if [ ! -L exch_uv_bgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_r8.F; fi
if [ ! -L exch_uv_bgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rl.F; fi
if [ ! -L exch_uv_bgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_bgrid_3d_rs.F exch_uv_bgrid_3d_rs.F; fi
if [ ! -L exch_uv_dgrid_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r4.F; fi
if [ ! -L exch_uv_dgrid_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_r8.F; fi
if [ ! -L exch_uv_dgrid_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rl.F; fi
if [ ! -L exch_uv_dgrid_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_dgrid_3d_rs.F exch_uv_dgrid_3d_rs.F; fi
if [ ! -L exch_uv_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r4.F exch_uv_xy_r4.F; fi
if [ ! -L exch_uv_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_r8.F exch_uv_xy_r8.F; fi
if [ ! -L exch_uv_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rl.F exch_uv_xy_rl.F; fi
if [ ! -L exch_uv_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xy_rs.F exch_uv_xy_rs.F; fi
if [ ! -L exch_uv_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r4.F exch_uv_xyz_r4.F; fi
if [ ! -L exch_uv_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_r8.F exch_uv_xyz_r8.F; fi
if [ ! -L exch_uv_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rl.F exch_uv_xyz_rl.F; fi
if [ ! -L exch_uv_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_uv_xyz_rs.F exch_uv_xyz_rs.F; fi
if [ ! -L exch_xy_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r4.F exch_xy_r4.F; fi
if [ ! -L exch_xy_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_r8.F exch_xy_r8.F; fi
if [ ! -L exch_xy_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rl.F exch_xy_rl.F; fi
if [ ! -L exch_xy_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xy_rs.F exch_xy_rs.F; fi
if [ ! -L exch_xyz_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r4.F exch_xyz_r4.F; fi
if [ ! -L exch_xyz_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_r8.F exch_xyz_r8.F; fi
if [ ! -L exch_xyz_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rl.F exch_xyz_rl.F; fi
if [ ! -L exch_xyz_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_xyz_rs.F exch_xyz_rs.F; fi
if [ ! -L exch_z_3d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r4.F exch_z_3d_r4.F; fi
if [ ! -L exch_z_3d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_r8.F exch_z_3d_r8.F; fi
if [ ! -L exch_z_3d_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rl.F exch_z_3d_rl.F; fi
if [ ! -L exch_z_3d_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/exch_z_3d_rs.F exch_z_3d_rs.F; fi
if [ ! -L fill_cs_corner_ag_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_ag_rl.F fill_cs_corner_ag_rl.F; fi
if [ ! -L fill_cs_corner_tr_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_tr_rl.F fill_cs_corner_tr_rl.F; fi
if [ ! -L fill_cs_corner_uv_rl.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rl.F fill_cs_corner_uv_rl.F; fi
if [ ! -L fill_cs_corner_uv_rs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fill_cs_corner_uv_rs.F fill_cs_corner_uv_rs.F; fi
if [ ! -L fool_the_compiler.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/fool_the_compiler.F fool_the_compiler.F; fi
if [ ! -L gather_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r4.F gather_2d_r4.F; fi
if [ ! -L gather_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_r8.F gather_2d_r8.F; fi
if [ ! -L gather_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r4.F gather_2d_wh_r4.F; fi
if [ ! -L gather_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_2d_wh_r8.F gather_2d_wh_r8.F; fi
if [ ! -L gather_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r4.F gather_vec_r4.F; fi
if [ ! -L gather_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_vec_r8.F gather_vec_r8.F; fi
if [ ! -L gather_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_xz.F gather_xz.F; fi
if [ ! -L gather_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gather_yz.F gather_yz.F; fi
if [ ! -L get_periodic_interval.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/get_periodic_interval.F get_periodic_interval.F; fi
if [ ! -L global_max.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_max.F global_max.F; fi
if [ ! -L global_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum.F global_sum.F; fi
if [ ! -L global_sum_singlecpu.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_singlecpu.F global_sum_singlecpu.F; fi
if [ ! -L global_sum_tile.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_sum_tile.F global_sum_tile.F; fi
if [ ! -L global_vec_sum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/global_vec_sum.F global_vec_sum.F; fi
if [ ! -L gsum.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsum.F gsum.F; fi
if [ ! -L ini_communication_patterns.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_communication_patterns.F ini_communication_patterns.F; fi
if [ ! -L ini_procs.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_procs.F ini_procs.F; fi
if [ ! -L ini_threading_environment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ini_threading_environment.F ini_threading_environment.F; fi
if [ ! -L lef_zero.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/lef_zero.F lef_zero.F; fi
if [ ! -L main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/main.F main.F; fi
if [ ! -L master_cpu_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_io.F master_cpu_io.F; fi
if [ ! -L master_cpu_thread.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/master_cpu_thread.F master_cpu_thread.F; fi
if [ ! -L mds_byteswapi4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapi4.F mds_byteswapi4.F; fi
if [ ! -L mds_byteswapr4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr4.F mds_byteswapr4.F; fi
if [ ! -L mds_byteswapr8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_byteswapr8.F mds_byteswapr8.F; fi
if [ ! -L mdsfindunit.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mdsfindunit.F mdsfindunit.F; fi
if [ ! -L mds_flush.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_flush.F mds_flush.F; fi
if [ ! -L mds_reclen.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/mds_reclen.F mds_reclen.F; fi
if [ ! -L memsync.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/memsync.F memsync.F; fi
if [ ! -L nml_change_syntax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_change_syntax.F nml_change_syntax.F; fi
if [ ! -L nml_set_terminator.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/nml_set_terminator.F nml_set_terminator.F; fi
if [ ! -L open_copy_data_file.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/open_copy_data_file.F open_copy_data_file.F; fi
if [ ! -L print.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/print.F print.F; fi
if [ ! -L reset_halo.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/reset_halo.F reset_halo.F; fi
if [ ! -L scatter_2d_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r4.F scatter_2d_r4.F; fi
if [ ! -L scatter_2d_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_r8.F scatter_2d_r8.F; fi
if [ ! -L scatter_2d_wh_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r4.F scatter_2d_wh_r4.F; fi
if [ ! -L scatter_2d_wh_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_2d_wh_r8.F scatter_2d_wh_r8.F; fi
if [ ! -L scatter_vec_r4.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r4.F scatter_vec_r4.F; fi
if [ ! -L scatter_vec_r8.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_vec_r8.F scatter_vec_r8.F; fi
if [ ! -L scatter_xz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_xz.F scatter_xz.F; fi
if [ ! -L scatter_yz.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/scatter_yz.F scatter_yz.F; fi
if [ ! -L stop_if_error.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/stop_if_error.F stop_if_error.F; fi
if [ ! -L timers.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timers.F timers.F; fi
if [ ! -L utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/utils.F utils.F; fi
if [ ! -L write_utils.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/write_utils.F write_utils.F; fi
if [ ! -L adams_bashforth2.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth2.F adams_bashforth2.F; fi
if [ ! -L adams_bashforth3.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/adams_bashforth3.F adams_bashforth3.F; fi
if [ ! -L add_walls2masks.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/add_walls2masks.F add_walls2masks.F; fi
if [ ! -L apply_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/apply_forcing.F apply_forcing.F; fi
if [ ! -L calc_3d_diffusivity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_3d_diffusivity.F calc_3d_diffusivity.F; fi
if [ ! -L calc_adv_flow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_adv_flow.F calc_adv_flow.F; fi
if [ ! -L calc_div_ghat.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_div_ghat.F calc_div_ghat.F; fi
if [ ! -L calc_eddy_stress.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_eddy_stress.F calc_eddy_stress.F; fi
if [ ! -L calc_grad_phi_fv.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_fv.F calc_grad_phi_fv.F; fi
if [ ! -L calc_grad_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_hyd.F calc_grad_phi_hyd.F; fi
if [ ! -L calc_grad_phi_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grad_phi_surf.F calc_grad_phi_surf.F; fi
if [ ! -L calc_grid_angles.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_grid_angles.F calc_grid_angles.F; fi
if [ ! -L calc_gw.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_gw.F calc_gw.F; fi
if [ ! -L calc_ivdc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_ivdc.F calc_ivdc.F; fi
if [ ! -L calc_oce_mxlayer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_oce_mxlayer.F calc_oce_mxlayer.F; fi
if [ ! -L calc_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_phi_hyd.F calc_phi_hyd.F; fi
if [ ! -L calc_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_r_star.F calc_r_star.F; fi
if [ ! -L calc_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_surf_dr.F calc_surf_dr.F; fi
if [ ! -L calc_viscosity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_viscosity.F calc_viscosity.F; fi
if [ ! -L calc_wsurf_tr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/calc_wsurf_tr.F calc_wsurf_tr.F; fi
if [ ! -L cg2d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_ex0.F cg2d_ex0.F; fi
if [ ! -L cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d.F cg2d.F; fi
if [ ! -L cg2d_nsa.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_nsa.F cg2d_nsa.F; fi
if [ ! -L cg2d_sr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg2d_sr.F cg2d_sr.F; fi
if [ ! -L cg3d_ex0.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d_ex0.F cg3d_ex0.F; fi
if [ ! -L cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cg3d.F cg3d.F; fi
if [ ! -L check_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/check_pickup.F check_pickup.F; fi
if [ ! -L config_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_check.F config_check.F; fi
if [ ! -L config_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/config_summary.F config_summary.F; fi
if [ ! -L convective_adjustment.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment.F convective_adjustment.F; fi
if [ ! -L convective_adjustment_ini.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_adjustment_ini.F convective_adjustment_ini.F; fi
if [ ! -L convectively_mixtracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convectively_mixtracer.F convectively_mixtracer.F; fi
if [ ! -L convective_weights.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/convective_weights.F convective_weights.F; fi
if [ ! -L correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/correction_step.F correction_step.F; fi
if [ ! -L cycle_ab_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_ab_tracer.F cycle_ab_tracer.F; fi
if [ ! -L cycle_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/cycle_tracer.F cycle_tracer.F; fi
if [ ! -L diags_oceanic_surf_flux.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_oceanic_surf_flux.F diags_oceanic_surf_flux.F; fi
if [ ! -L diags_phi_hyd.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_hyd.F diags_phi_hyd.F; fi
if [ ! -L diags_phi_rlow.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_phi_rlow.F diags_phi_rlow.F; fi
if [ ! -L diags_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_rho.F diags_rho.F; fi
if [ ! -L diags_sound_speed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/diags_sound_speed.F diags_sound_speed.F; fi
if [ ! -L do_atmospheric_phys.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_atmospheric_phys.F do_atmospheric_phys.F; fi
if [ ! -L do_fields_blocking_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_fields_blocking_exchanges.F do_fields_blocking_exchanges.F; fi
if [ ! -L do_stagger_fields_exchanges.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_stagger_fields_exchanges.F do_stagger_fields_exchanges.F; fi
if [ ! -L do_statevars_diags.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_diags.F do_statevars_diags.F; fi
if [ ! -L do_statevars_tave.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_statevars_tave.F do_statevars_tave.F; fi
if [ ! -L do_the_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_the_model_io.F do_the_model_io.F; fi
if [ ! -L do_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/do_write_pickup.F do_write_pickup.F; fi
if [ ! -L dynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/dynamics.F dynamics.F; fi
if [ ! -L external_fields_load.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_fields_load.F external_fields_load.F; fi
if [ ! -L external_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing.F external_forcing.F; fi
if [ ! -L external_forcing_surf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/external_forcing_surf.F external_forcing_surf.F; fi
if [ ! -L find_alpha.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_alpha.F find_alpha.F; fi
if [ ! -L find_hyd_press_1d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_hyd_press_1d.F find_hyd_press_1d.F; fi
if [ ! -L find_rho.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/find_rho.F find_rho.F; fi
if [ ! -L forcing_surf_relax.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forcing_surf_relax.F forcing_surf_relax.F; fi
if [ ! -L forward_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/forward_step.F forward_step.F; fi
if [ ! -L freesurf_rescale_g.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freesurf_rescale_g.F freesurf_rescale_g.F; fi
if [ ! -L freeze_surface.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/freeze_surface.F freeze_surface.F; fi
if [ ! -L grad_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/grad_sigma.F grad_sigma.F; fi
if [ ! -L gsw_teos10.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/gsw_teos10.F gsw_teos10.F; fi
if [ ! -L impldiff.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/impldiff.F impldiff.F; fi
if [ ! -L ini_cartesian_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cartesian_grid.F ini_cartesian_grid.F; fi
if [ ! -L ini_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg2d.F ini_cg2d.F; fi
if [ ! -L ini_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cg3d.F ini_cg3d.F; fi
if [ ! -L ini_cori.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cori.F ini_cori.F; fi
if [ ! -L ini_curvilinear_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_curvilinear_grid.F ini_curvilinear_grid.F; fi
if [ ! -L ini_cylinder_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_cylinder_grid.F ini_cylinder_grid.F; fi
if [ ! -L ini_depths.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_depths.F ini_depths.F; fi
if [ ! -L ini_dynvars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_dynvars.F ini_dynvars.F; fi
if [ ! -L ini_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_eos.F ini_eos.F; fi
if [ ! -L ini_ffields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_ffields.F ini_ffields.F; fi
if [ ! -L ini_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_fields.F ini_fields.F; fi
if [ ! -L ini_forcing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_forcing.F ini_forcing.F; fi
if [ ! -L ini_global_domain.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_global_domain.F ini_global_domain.F; fi
if [ ! -L ini_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_grid.F ini_grid.F; fi
if [ ! -L ini_linear_phisurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_linear_phisurf.F ini_linear_phisurf.F; fi
if [ ! -L ini_local_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_local_grid.F ini_local_grid.F; fi
if [ ! -L ini_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_masks_etc.F ini_masks_etc.F; fi
if [ ! -L ini_mixing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mixing.F ini_mixing.F; fi
if [ ! -L ini_mnc_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_mnc_vars.F ini_mnc_vars.F; fi
if [ ! -L ini_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_model_io.F ini_model_io.F; fi
if [ ! -L ini_nh_fields.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_fields.F ini_nh_fields.F; fi
if [ ! -L ini_nh_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nh_vars.F ini_nh_vars.F; fi
if [ ! -L ini_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_nlfs_vars.F ini_nlfs_vars.F; fi
if [ ! -L ini_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_parms.F ini_parms.F; fi
if [ ! -L ini_p_ground.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_p_ground.F ini_p_ground.F; fi
if [ ! -L ini_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_pressure.F ini_pressure.F; fi
if [ ! -L ini_psurf.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_psurf.F ini_psurf.F; fi
if [ ! -L ini_salt.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_salt.F ini_salt.F; fi
if [ ! -L ini_sigma_hfac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_sigma_hfac.F ini_sigma_hfac.F; fi
if [ ! -L ini_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_spherical_polar_grid.F ini_spherical_polar_grid.F; fi
if [ ! -L ini_theta.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_theta.F ini_theta.F; fi
if [ ! -L initialise_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_fixed.F initialise_fixed.F; fi
if [ ! -L initialise_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/initialise_varia.F initialise_varia.F; fi
if [ ! -L ini_vel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vel.F ini_vel.F; fi
if [ ! -L ini_vertical_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/ini_vertical_grid.F ini_vertical_grid.F; fi
if [ ! -L integrate_for_w.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integrate_for_w.F integrate_for_w.F; fi
if [ ! -L integr_continuity.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/integr_continuity.F integr_continuity.F; fi
if [ ! -L load_fields_driver.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_fields_driver.F load_fields_driver.F; fi
if [ ! -L load_grid_spacing.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_grid_spacing.F load_grid_spacing.F; fi
if [ ! -L load_ref_files.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/load_ref_files.F load_ref_files.F; fi
if [ ! -L main_do_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/main_do_loop.F main_do_loop.F; fi
if [ ! -L momentum_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/momentum_correction_step.F momentum_correction_step.F; fi
if [ ! -L packages_boot.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_boot.F packages_boot.F; fi
if [ ! -L packages_check.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_check.F packages_check.F; fi
if [ ! -L packages_error_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_error_msg.F packages_error_msg.F; fi
if [ ! -L packages_init_fixed.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_fixed.F packages_init_fixed.F; fi
if [ ! -L packages_init_variables.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_init_variables.F packages_init_variables.F; fi
if [ ! -L packages_print_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_print_msg.F packages_print_msg.F; fi
if [ ! -L packages_readparms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_readparms.F packages_readparms.F; fi
if [ ! -L packages_unused_msg.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_unused_msg.F packages_unused_msg.F; fi
if [ ! -L packages_write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/packages_write_pickup.F packages_write_pickup.F; fi
if [ ! -L plot_field.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/plot_field.F plot_field.F; fi
if [ ! -L port_rand.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/port_rand.F port_rand.F; fi
if [ ! -L post_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/post_cg3d.F post_cg3d.F; fi
if [ ! -L pre_cg3d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pre_cg3d.F pre_cg3d.F; fi
if [ ! -L pressure_for_eos.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/pressure_for_eos.F pressure_for_eos.F; fi
if [ ! -L read_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/read_pickup.F read_pickup.F; fi
if [ ! -L remove_mean.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/remove_mean.F remove_mean.F; fi
if [ ! -L reset_nlfs_vars.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/reset_nlfs_vars.F reset_nlfs_vars.F; fi
if [ ! -L rotate_spherical_polar_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_spherical_polar_grid.F rotate_spherical_polar_grid.F; fi
if [ ! -L rotate_uv2en.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/rotate_uv2en.F rotate_uv2en.F; fi
if [ ! -L salt_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/salt_integrate.F salt_integrate.F; fi
if [ ! -L seawater.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/seawater.F seawater.F; fi
if [ ! -L set_defaults.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_defaults.F set_defaults.F; fi
if [ ! -L set_grid_factors.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_grid_factors.F set_grid_factors.F; fi
if [ ! -L set_parms.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_parms.F set_parms.F; fi
if [ ! -L set_ref_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/set_ref_state.F set_ref_state.F; fi
if [ ! -L solve_for_pressure.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_for_pressure.F solve_for_pressure.F; fi
if [ ! -L solve_pentadiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_pentadiagonal.F solve_pentadiagonal.F; fi
if [ ! -L solve_tridiagonal.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_tridiagonal.F solve_tridiagonal.F; fi
if [ ! -L solve_uv_tridiago.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/solve_uv_tridiago.F solve_uv_tridiago.F; fi
if [ ! -L state_summary.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/state_summary.F state_summary.F; fi
if [ ! -L swfrac.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/swfrac.F swfrac.F; fi
if [ ! -L taueddy_init_varia.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_init_varia.F taueddy_init_varia.F; fi
if [ ! -L taueddy_tendency_apply.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/taueddy_tendency_apply.F taueddy_tendency_apply.F; fi
if [ ! -L temp_integrate.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/temp_integrate.F temp_integrate.F; fi
if [ ! -L the_main_loop.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_main_loop.F the_main_loop.F; fi
if [ ! -L the_model_main.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/the_model_main.F the_model_main.F; fi
if [ ! -L thermodynamics.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/thermodynamics.F thermodynamics.F; fi
if [ ! -L timestep.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep.F timestep.F; fi
if [ ! -L timestep_tracer.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_tracer.F timestep_tracer.F; fi
if [ ! -L timestep_wvel.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/timestep_wvel.F timestep_wvel.F; fi
if [ ! -L tracers_correction_step.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_correction_step.F tracers_correction_step.F; fi
if [ ! -L tracers_iigw_correction.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/tracers_iigw_correction.F tracers_iigw_correction.F; fi
if [ ! -L turnoff_model_io.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/turnoff_model_io.F turnoff_model_io.F; fi
if [ ! -L update_cg2d.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_cg2d.F update_cg2d.F; fi
if [ ! -L update_etah.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etah.F update_etah.F; fi
if [ ! -L update_etaws.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_etaws.F update_etaws.F; fi
if [ ! -L update_masks_etc.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_masks_etc.F update_masks_etc.F; fi
if [ ! -L update_r_star.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_r_star.F update_r_star.F; fi
if [ ! -L update_sigma.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_sigma.F update_sigma.F; fi
if [ ! -L update_surf_dr.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/update_surf_dr.F update_surf_dr.F; fi
if [ ! -L write_grid.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_grid.F write_grid.F; fi
if [ ! -L write_pickup.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_pickup.F write_pickup.F; fi
if [ ! -L write_state.F ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/src/write_state.F write_state.F; fi
if [ ! -L gsl_ieee_env.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/gsl_ieee_env.c gsl_ieee_env.c; fi
if [ ! -L ptwrapper.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/ptwrapper.c ptwrapper.c; fi
if [ ! -L setdir.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setdir.c setdir.c; fi
if [ ! -L setrlstk.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/setrlstk.c setrlstk.c; fi
if [ ! -L sigreg.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/sigreg.c sigreg.c; fi
if [ ! -L tim.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/tim.c tim.c; fi
if [ ! -L timer_stats.c ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/src/timer_stats.c timer_stats.c; fi
if [ ! -L CPP_EEOPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/CPP_EEOPTIONS.h CPP_EEOPTIONS.h; fi
if [ ! -L SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/code/SIZE.h SIZE.h; fi
if [ ! -L DEBUG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/debug/DEBUG_OPTIONS.h DEBUG_OPTIONS.h; fi
if [ ! -L DIAGNOSTICS_CALC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_CALC.h DIAGNOSTICS_CALC.h; fi
if [ ! -L DIAGNOSTICS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS.h DIAGNOSTICS.h; fi
if [ ! -L DIAGNOSTICS_SIZE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGNOSTICS_SIZE.h DIAGNOSTICS_SIZE.h; fi
if [ ! -L DIAG_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAG_OPTIONS.h DIAG_OPTIONS.h; fi
if [ ! -L DIAGSTATS_REGIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/diagnostics/DIAGSTATS_REGIONS.h DIAGSTATS_REGIONS.h; fi
if [ ! -L gad_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev1_dir.h gad_ad_check_lev1_dir.h; fi
if [ ! -L gad_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev2_dir.h gad_ad_check_lev2_dir.h; fi
if [ ! -L gad_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev3_dir.h gad_ad_check_lev3_dir.h; fi
if [ ! -L gad_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/gad_ad_check_lev4_dir.h gad_ad_check_lev4_dir.h; fi
if [ ! -L GAD_FLUX_LIMITER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_FLUX_LIMITER.h GAD_FLUX_LIMITER.h; fi
if [ ! -L GAD.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD.h GAD.h; fi
if [ ! -L GAD_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_OPTIONS.h GAD_OPTIONS.h; fi
if [ ! -L GAD_SOM_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/generic_advdiff/GAD_SOM_VARS.h GAD_SOM_VARS.h; fi
if [ ! -L MDSIO_BUFF_3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_3D.h MDSIO_BUFF_3D.h; fi
if [ ! -L MDSIO_BUFF_WH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_BUFF_WH.h MDSIO_BUFF_WH.h; fi
if [ ! -L MDSIO_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mdsio/MDSIO_OPTIONS.h MDSIO_OPTIONS.h; fi
if [ ! -L MOM_COMMON_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_COMMON_OPTIONS.h MOM_COMMON_OPTIONS.h; fi
if [ ! -L MOM_VISC.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_common/MOM_VISC.h MOM_VISC.h; fi
if [ ! -L MOM_FLUXFORM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM.h MOM_FLUXFORM.h; fi
if [ ! -L MOM_FLUXFORM_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_fluxform/MOM_FLUXFORM_OPTIONS.h MOM_FLUXFORM_OPTIONS.h; fi
if [ ! -L MOM_VECINV_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/mom_vecinv/MOM_VECINV_OPTIONS.h MOM_VECINV_OPTIONS.h; fi
if [ ! -L MONITOR.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR.h MONITOR.h; fi
if [ ! -L MONITOR_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/monitor/MONITOR_OPTIONS.h MONITOR_OPTIONS.h; fi
if [ ! -L obcs_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev1_dir.h obcs_ad_check_lev1_dir.h; fi
if [ ! -L obcs_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev2_dir.h obcs_ad_check_lev2_dir.h; fi
if [ ! -L obcs_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev3_dir.h obcs_ad_check_lev3_dir.h; fi
if [ ! -L obcs_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/obcs_ad_check_lev4_dir.h obcs_ad_check_lev4_dir.h; fi
if [ ! -L OBCS_FIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_FIELDS.h OBCS_FIELDS.h; fi
if [ ! -L OBCS_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_GRID.h OBCS_GRID.h; fi
if [ ! -L OBCS_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_OPTIONS.h OBCS_OPTIONS.h; fi
if [ ! -L OBCS_PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PARAMS.h OBCS_PARAMS.h; fi
if [ ! -L OBCS_PTRACERS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_PTRACERS.h OBCS_PTRACERS.h; fi
if [ ! -L OBCS_SEAICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/OBCS_SEAICE.h OBCS_SEAICE.h; fi
if [ ! -L ORLANSKI.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/obcs/ORLANSKI.h ORLANSKI.h; fi
if [ ! -L RW_MFLDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_MFLDS.h RW_MFLDS.h; fi
if [ ! -L RW_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/rw/RW_OPTIONS.h RW_OPTIONS.h; fi
if [ ! -L shelfice_ad_check_lev1_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev1_dir.h shelfice_ad_check_lev1_dir.h; fi
if [ ! -L shelfice_ad_check_lev2_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev2_dir.h shelfice_ad_check_lev2_dir.h; fi
if [ ! -L shelfice_ad_check_lev3_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev3_dir.h shelfice_ad_check_lev3_dir.h; fi
if [ ! -L shelfice_ad_check_lev4_dir.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/shelfice_ad_check_lev4_dir.h shelfice_ad_check_lev4_dir.h; fi
if [ ! -L SHELFICE_COST.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_COST.h SHELFICE_COST.h; fi
if [ ! -L SHELFICE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE.h SHELFICE.h; fi
if [ ! -L SHELFICE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_OPTIONS.h SHELFICE_OPTIONS.h; fi
if [ ! -L SHELFICE_TAVE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/shelfice/SHELFICE_TAVE.h SHELFICE_TAVE.h; fi
if [ ! -L TIMEAVE_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_OPTIONS.h TIMEAVE_OPTIONS.h; fi
if [ ! -L TIMEAVE_STATV.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/pkg/timeave/TIMEAVE_STATV.h TIMEAVE_STATV.h; fi
if [ ! -L cmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_c.h cmumps_c.h; fi
if [ ! -L cmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_root.h cmumps_root.h; fi
if [ ! -L cmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/cmumps_struc.h cmumps_struc.h; fi
if [ ! -L dmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_c.h dmumps_c.h; fi
if [ ! -L dmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_root.h dmumps_root.h; fi
if [ ! -L dmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/dmumps_struc.h dmumps_struc.h; fi
if [ ! -L gklib_defs.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_defs.h gklib_defs.h; fi
if [ ! -L gklib_rename.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_rename.h gklib_rename.h; fi
if [ ! -L gklib_tls.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/gklib_tls.h gklib_tls.h; fi
if [ ! -L metis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/metis.h metis.h; fi
if [ ! -L mpicxx.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpicxx.h mpicxx.h; fi
if [ ! -L mpif.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpif.h mpif.h; fi
if [ ! -L mpi.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi.h mpi.h; fi
if [ ! -L mpiof.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpiof.h mpiof.h; fi
if [ ! -L mpio.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpio.h mpio.h; fi
if [ ! -L mpi_proto.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mpi_proto.h mpi_proto.h; fi
if [ ! -L mumps_compat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_compat.h mumps_compat.h; fi
if [ ! -L mumps_c_types.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_c_types.h mumps_c_types.h; fi
if [ ! -L mumps_int_def.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/mumps_int_def.h mumps_int_def.h; fi
if [ ! -L parmetis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/parmetis.h parmetis.h; fi
if [ ! -L petscao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscao.h petscao.h; fi
if [ ! -L petscbag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbag.h petscbag.h; fi
if [ ! -L petscblaslapack.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack.h petscblaslapack.h; fi
if [ ! -L petscblaslapack_mangle.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscblaslapack_mangle.h petscblaslapack_mangle.h; fi
if [ ! -L petscbm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbm.h petscbm.h; fi
if [ ! -L petscbt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscbt.h petscbt.h; fi
if [ ! -L petsccharacteristic.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccharacteristic.h petsccharacteristic.h; fi
if [ ! -L petscconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf.h petscconf.h; fi
if [ ! -L petscconfiginfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconfiginfo.h petscconfiginfo.h; fi
if [ ! -L petscconf_poison.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconf_poison.h petscconf_poison.h; fi
if [ ! -L petscconvest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscconvest.h petscconvest.h; fi
if [ ! -L petsccxxcomplexfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsccxxcomplexfix.h petsccxxcomplexfix.h; fi
if [ ! -L petscdevice_cuda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cuda.h petscdevice_cuda.h; fi
if [ ! -L petscdevice_cupm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_cupm.h petscdevice_cupm.h; fi
if [ ! -L petscdevice.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice.h petscdevice.h; fi
if [ ! -L petscdevice_hip.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevice_hip.h petscdevice_hip.h; fi
if [ ! -L petscdevicetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdevicetypes.h petscdevicetypes.h; fi
if [ ! -L petscdmadaptor.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptor.h petscdmadaptor.h; fi
if [ ! -L petscdmadaptortypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmadaptortypes.h petscdmadaptortypes.h; fi
if [ ! -L petscdmceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmceed.h petscdmceed.h; fi
if [ ! -L petscdmcomposite.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmcomposite.h petscdmcomposite.h; fi
if [ ! -L petscdmda.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmda.h petscdmda.h; fi
if [ ! -L petscdmdatypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmdatypes.h petscdmdatypes.h; fi
if [ ! -L petscdmfield.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmfield.h petscdmfield.h; fi
if [ ! -L petscdmforest.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmforest.h petscdmforest.h; fi
if [ ! -L petscdm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdm.h petscdm.h; fi
if [ ! -L petscdmlabelephemeral.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabelephemeral.h petscdmlabelephemeral.h; fi
if [ ! -L petscdmlabel.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabel.h petscdmlabel.h; fi
if [ ! -L petscdmlabeltypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmlabeltypes.h petscdmlabeltypes.h; fi
if [ ! -L petscdmmoab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmmoab.h petscdmmoab.h; fi
if [ ! -L petscdmnetwork.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmnetwork.h petscdmnetwork.h; fi
if [ ! -L petscdmpatch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmpatch.h petscdmpatch.h; fi
if [ ! -L petscdmplexceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexceed.h petscdmplexceed.h; fi
if [ ! -L petscdmplexegads.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplexegads.h petscdmplexegads.h; fi
if [ ! -L petscdmplex.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplex.h petscdmplex.h; fi
if [ ! -L petscdmplextransform.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransform.h petscdmplextransform.h; fi
if [ ! -L petscdmplextransformtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextransformtypes.h petscdmplextransformtypes.h; fi
if [ ! -L petscdmplextypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmplextypes.h petscdmplextypes.h; fi
if [ ! -L petscdmproduct.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmproduct.h petscdmproduct.h; fi
if [ ! -L petscdmredundant.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmredundant.h petscdmredundant.h; fi
if [ ! -L petscdmshell.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmshell.h petscdmshell.h; fi
if [ ! -L petscdmsliced.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmsliced.h petscdmsliced.h; fi
if [ ! -L petscdmstag.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmstag.h petscdmstag.h; fi
if [ ! -L petscdmswarm.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmswarm.h petscdmswarm.h; fi
if [ ! -L petscdmtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdmtypes.h petscdmtypes.h; fi
if [ ! -L petscdraw.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdraw.h petscdraw.h; fi
if [ ! -L petscdrawtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdrawtypes.h petscdrawtypes.h; fi
if [ ! -L petscds.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscds.h petscds.h; fi
if [ ! -L petscdstypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdstypes.h petscdstypes.h; fi
if [ ! -L petscdt.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdt.h petscdt.h; fi
if [ ! -L petscdualspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscdualspace.h petscdualspace.h; fi
if [ ! -L petscerror.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscerror.h petscerror.h; fi
if [ ! -L petscfeceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfeceed.h petscfeceed.h; fi
if [ ! -L petscfe.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfe.h petscfe.h; fi
if [ ! -L petscfetypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfetypes.h petscfetypes.h; fi
if [ ! -L petscfix.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfix.h petscfix.h; fi
if [ ! -L petscfvceed.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvceed.h petscfvceed.h; fi
if [ ! -L petscfv.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfv.h petscfv.h; fi
if [ ! -L petscfvtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscfvtypes.h petscfvtypes.h; fi
if [ ! -L petsc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsc.h petsc.h; fi
if [ ! -L petscis.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscis.h petscis.h; fi
if [ ! -L petscistypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscistypes.h petscistypes.h; fi
if [ ! -L petscksp.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscksp.h petscksp.h; fi
if [ ! -L petsclandau.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclandau.h petsclandau.h; fi
if [ ! -L petsclayouthdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclayouthdf5.h petsclayouthdf5.h; fi
if [ ! -L petsclogdeprecated.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogdeprecated.h petsclogdeprecated.h; fi
if [ ! -L petsclog.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclog.h petsclog.h; fi
if [ ! -L petsclogtypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsclogtypes.h petsclogtypes.h; fi
if [ ! -L petscmachineinfo.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmachineinfo.h petscmachineinfo.h; fi
if [ ! -L petscmacros.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmacros.h petscmacros.h; fi
if [ ! -L petscmatcoarsen.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatcoarsen.h petscmatcoarsen.h; fi
if [ ! -L petscmatelemental.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatelemental.h petscmatelemental.h; fi
if [ ! -L petscmat.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmat.h petscmat.h; fi
if [ ! -L petscmath.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmath.h petscmath.h; fi
if [ ! -L petscmathtool.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathtool.h petscmathtool.h; fi
if [ ! -L petscmathypre.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmathypre.h petscmathypre.h; fi
if [ ! -L petscmatlab.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscmatlab.h petscmatlab.h; fi
if [ ! -L petscoptions.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscoptions.h petscoptions.h; fi
if [ ! -L petscpartitioner.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpartitioner.h petscpartitioner.h; fi
if [ ! -L petscpc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpc.h petscpc.h; fi
if [ ! -L petscpctypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpctypes.h petscpctypes.h; fi
if [ ! -L petscpf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpf.h petscpf.h; fi
if [ ! -L petscpkg_version.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscpkg_version.h petscpkg_version.h; fi
if [ ! -L petscsection.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsection.h petscsection.h; fi
if [ ! -L petscsectiontypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsectiontypes.h petscsectiontypes.h; fi
if [ ! -L petscsf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsf.h petscsf.h; fi
if [ ! -L petscsftypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsftypes.h petscsftypes.h; fi
if [ ! -L petscsnes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnes.h petscsnes.h; fi
if [ ! -L petscsnestypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsnestypes.h petscsnestypes.h; fi
if [ ! -L petscspace.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscspace.h petscspace.h; fi
if [ ! -L petscstring.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscstring.h petscstring.h; fi
if [ ! -L petscsys.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsys.h petscsys.h; fi
if [ ! -L petscsystypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscsystypes.h petscsystypes.h; fi
if [ ! -L petsctao_deprecations.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao_deprecations.h petsctao_deprecations.h; fi
if [ ! -L petsctao.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctao.h petsctao.h; fi
if [ ! -L petsctaolinesearch.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctaolinesearch.h petsctaolinesearch.h; fi
if [ ! -L petsctime.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petsctime.h petsctime.h; fi
if [ ! -L petscts.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscts.h petscts.h; fi
if [ ! -L petscvec.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscvec.h petscvec.h; fi
if [ ! -L petscversion.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscversion.h petscversion.h; fi
if [ ! -L petscviennacl.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviennacl.h petscviennacl.h; fi
if [ ! -L petscviewerexodusii.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerexodusii.h petscviewerexodusii.h; fi
if [ ! -L petscviewer.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewer.h petscviewer.h; fi
if [ ! -L petscviewerhdf5.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewerhdf5.h petscviewerhdf5.h; fi
if [ ! -L petscviewersaws.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewersaws.h petscviewersaws.h; fi
if [ ! -L petscviewertypes.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscviewertypes.h petscviewertypes.h; fi
if [ ! -L petscwebclient.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/petscwebclient.h petscwebclient.h; fi
if [ ! -L smumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_c.h smumps_c.h; fi
if [ ! -L smumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_root.h smumps_root.h; fi
if [ ! -L smumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/smumps_struc.h smumps_struc.h; fi
if [ ! -L zconf.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zconf.h zconf.h; fi
if [ ! -L zlib.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zlib.h zlib.h; fi
if [ ! -L zmumps_c.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_c.h zmumps_c.h; fi
if [ ! -L zmumps_root.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_root.h zmumps_root.h; fi
if [ ! -L zmumps_struc.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include/zmumps_struc.h zmumps_struc.h; fi
if [ ! -L BAR2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BAR2.h BAR2.h; fi
if [ ! -L BARRIER.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/BARRIER.h BARRIER.h; fi
if [ ! -L CPP_EEMACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CPP_EEMACROS.h CPP_EEMACROS.h; fi
if [ ! -L CUMULSUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/CUMULSUM.h CUMULSUM.h; fi
if [ ! -L DEF_IN_MAKEFILE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/DEF_IN_MAKEFILE.h DEF_IN_MAKEFILE.h; fi
if [ ! -L EEBUFF_SCPU.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEBUFF_SCPU.h EEBUFF_SCPU.h; fi
if [ ! -L EEPARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EEPARAMS.h EEPARAMS.h; fi
if [ ! -L EESUPPORT.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EESUPPORT.h EESUPPORT.h; fi
if [ ! -L EXCH.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/EXCH.h EXCH.h; fi
if [ ! -L GLOBAL_MAX.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_MAX.h GLOBAL_MAX.h; fi
if [ ! -L GLOBAL_SUM.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/GLOBAL_SUM.h GLOBAL_SUM.h; fi
if [ ! -L MAIN_PDIRECTIVES1.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES1.h MAIN_PDIRECTIVES1.h; fi
if [ ! -L MAIN_PDIRECTIVES2.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MAIN_PDIRECTIVES2.h MAIN_PDIRECTIVES2.h; fi
if [ ! -L MPI_INFO.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/MPI_INFO.h MPI_INFO.h; fi
if [ ! -L SIGREG.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/eesupp/inc/SIGREG.h SIGREG.h; fi
if [ ! -L CG2D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG2D.h CG2D.h; fi
if [ ! -L CG3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CG3D.h CG3D.h; fi
if [ ! -L CPP_OPTIONS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/CPP_OPTIONS.h CPP_OPTIONS.h; fi
if [ ! -L DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXC_MACROS.h DXC_MACROS.h; fi
if [ ! -L DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXF_MACROS.h DXF_MACROS.h; fi
if [ ! -L DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXG_MACROS.h DXG_MACROS.h; fi
if [ ! -L DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DXV_MACROS.h DXV_MACROS.h; fi
if [ ! -L DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYC_MACROS.h DYC_MACROS.h; fi
if [ ! -L DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYF_MACROS.h DYF_MACROS.h; fi
if [ ! -L DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYG_MACROS.h DYG_MACROS.h; fi
if [ ! -L DYNVARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYNVARS.h DYNVARS.h; fi
if [ ! -L DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/DYU_MACROS.h DYU_MACROS.h; fi
if [ ! -L EOS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/EOS.h EOS.h; fi
if [ ! -L FCORI_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FCORI_MACROS.h FCORI_MACROS.h; fi
if [ ! -L FFIELDS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/FFIELDS.h FFIELDS.h; fi
if [ ! -L GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID.h GRID.h; fi
if [ ! -L GRID_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/GRID_MACROS.h GRID_MACROS.h; fi
if [ ! -L HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACC_MACROS.h HFACC_MACROS.h; fi
if [ ! -L HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACS_MACROS.h HFACS_MACROS.h; fi
if [ ! -L HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/HFACW_MACROS.h HFACW_MACROS.h; fi
if [ ! -L MASKS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKS_MACROS.h MASKS_MACROS.h; fi
if [ ! -L MASKW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/MASKW_MACROS.h MASKW_MACROS.h; fi
if [ ! -L NH_VARS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/NH_VARS.h NH_VARS.h; fi
if [ ! -L PARAMS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/PARAMS.h PARAMS.h; fi
if [ ! -L RA_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RA_MACROS.h RA_MACROS.h; fi
if [ ! -L RAS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAS_MACROS.h RAS_MACROS.h; fi
if [ ! -L RAW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RAW_MACROS.h RAW_MACROS.h; fi
if [ ! -L RECIP_DXC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXC_MACROS.h RECIP_DXC_MACROS.h; fi
if [ ! -L RECIP_DXF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXF_MACROS.h RECIP_DXF_MACROS.h; fi
if [ ! -L RECIP_DXG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXG_MACROS.h RECIP_DXG_MACROS.h; fi
if [ ! -L RECIP_DXV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DXV_MACROS.h RECIP_DXV_MACROS.h; fi
if [ ! -L RECIP_DYC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYC_MACROS.h RECIP_DYC_MACROS.h; fi
if [ ! -L RECIP_DYF_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYF_MACROS.h RECIP_DYF_MACROS.h; fi
if [ ! -L RECIP_DYG_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYG_MACROS.h RECIP_DYG_MACROS.h; fi
if [ ! -L RECIP_DYU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_DYU_MACROS.h RECIP_DYU_MACROS.h; fi
if [ ! -L RECIP_HFACC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACC_MACROS.h RECIP_HFACC_MACROS.h; fi
if [ ! -L RECIP_HFACS_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACS_MACROS.h RECIP_HFACS_MACROS.h; fi
if [ ! -L RECIP_HFACW_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RECIP_HFACW_MACROS.h RECIP_HFACW_MACROS.h; fi
if [ ! -L RESTART.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/RESTART.h RESTART.h; fi
if [ ! -L SET_GRID.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SET_GRID.h SET_GRID.h; fi
if [ ! -L SOLVE_FOR_PRESSURE3D.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE3D.h SOLVE_FOR_PRESSURE3D.h; fi
if [ ! -L SOLVE_FOR_PRESSURE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SOLVE_FOR_PRESSURE.h SOLVE_FOR_PRESSURE.h; fi
if [ ! -L SURFACE.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/SURFACE.h SURFACE.h; fi
if [ ! -L TANPHIATU_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATU_MACROS.h TANPHIATU_MACROS.h; fi
if [ ! -L TANPHIATV_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/TANPHIATV_MACROS.h TANPHIATV_MACROS.h; fi
if [ ! -L THE_MODEL_COMMON_BLOCKS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/THE_MODEL_COMMON_BLOCKS.h THE_MODEL_COMMON_BLOCKS.h; fi
if [ ! -L XC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/XC_MACROS.h XC_MACROS.h; fi
if [ ! -L YC_MACROS.h ]; then ln -s /home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/model/inc/YC_MACROS.h YC_MACROS.h; fi
Creating FC_NAMEMANGLE.h ...
echo "#define FC_NAMEMANGLE(X)  X ## _" &gt; FC_NAMEMANGLE.h
Creating BUILD_INFO.h ...
echo "#define THISVER 'checkpoint68i'" &gt; BUILD_INFO.h
echo "#define THISUSER 'jenkins'" &gt;&gt; BUILD_INFO.h
echo "#define THISDATE 'Wed Sep  3 10:43:26 AM PDT 2025'" &gt;&gt; BUILD_INFO.h
echo "#define THISHOST 'Debian-12-VM'" &gt;&gt; BUILD_INFO.h
make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/MITgcm/build'
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/xmakedepend -f Makefile -o .f -DWORDLENGTH=4 -DNML_TERMINATOR -DALLOW_USE_MPI -DHAVE_SYSTEM -DHAVE_FDATE -DHAVE_ETIME_SBR -DHAVE_CLOC -DHAVE_SETRLSTK -DHAVE_SIGREG -DHAVE_STAT -DHAVE_FLUSH  -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/home/jenkins/workspace/Debian_Linux-Ice-Ocean/externalpackages/petsc/install/include -I/usr/lib/gcc/x86_64-linux-gnu/12/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu -I/usr/include cpl_issm.F do_oceanic_phys.F eeboot_minimal.F eedie.F chksum_tiled.F debug_call.F debug_cs_corner_uv.F debug_enter.F debug_fld_stats_rl.F debug_fld_stats_rs.F debug_leave.F debug_msg.F debug_stats_rl.F debug_stats_rs.F fill_in_corners_rl.F write_fullarray_rl.F write_fullarray_rs.F diag_calc_psivel.F diag_cg2d.F diagnostics_addtolist.F diagnostics_calc_phivel.F diagnostics_check.F diagnostics_clear.F diagnostics_fill.F diagnostics_fill_field.F diagnostics_fill_rs.F diagnostics_fill_state.F diagnostics_fract_fill.F diagnostics_ini_io.F diagnostics_init_early.F diagnostics_init_fixed.F diagnostics_init_varia.F diagnostics_interp_p2p.F diagnostics_interp_vert.F diagnostics_is_on.F diagnostics_list_check.F diagnostics_main_init.F diagnostics_mnc_out.F diagnostics_out.F diagnostics_readparms.F diagnostics_read_pickup.F diagnostics_scale_fill.F diagnostics_scale_fill_rs.F diagnostics_set_calc.F diagnostics_setdiag.F diagnostics_set_levels.F diagnostics_set_pointers.F diagnostics_status_error.F diagnostics_sum_levels.F diagnostics_summary.F diagnostics_switch_onoff.F diagnostics_utils.F diagnostics_write_adj.F diagnostics_write.F diagnostics_write_pickup.F diagstats_ascii_out.F diagstats_calc.F diagstats_clear.F diagstats_close_io.F diagstats_fill.F diagstats_global.F diagstats_ini_io.F diagstats_local.F diagstats_mnc_out.F diagstats_others_calc.F diagstats_output.F diagstats_setdiag.F diagstats_set_pointers.F diagstats_set_regions.F diag_vegtile_fill.F gad_advection.F gad_advscheme.F gad_biharm_r.F gad_biharm_x.F gad_biharm_y.F gad_c2_adv_r.F gad_c2_adv_x.F gad_c2_adv_y.F gad_c2_impl_r.F gad_c4_adv_r.F gad_c4_adv_x.F gad_c4_adv_y.F gad_calc_rhs.F gad_check.F gad_del2.F gad_diagnostics_init.F gad_diagnostics_state.F gad_diff_r.F gad_diff_x.F gad_diff_y.F gad_dst2u1_adv_r.F gad_dst2u1_adv_x.F gad_dst2u1_adv_y.F gad_dst2u1_impl_r.F gad_dst3_adv_r.F gad_dst3_adv_x.F gad_dst3_adv_y.F gad_dst3fl_adv_r.F gad_dst3fl_adv_x.F gad_dst3fl_adv_y.F gad_dst3fl_impl_r.F gad_exch_som.F gad_fluxlimit_adv_r.F gad_fluxlimit_adv_x.F gad_fluxlimit_adv_y.F gad_fluxlimit_impl_r.F gad_grad_x.F gad_grad_y.F gad_implicit_r.F gad_init_fixed.F gad_init_varia.F gad_os7mp_adv_r.F gad_os7mp_adv_x.F gad_os7mp_adv_y.F gad_osc_hat_r.F gad_osc_hat_x.F gad_osc_hat_y.F gad_osc_mul_r.F gad_osc_mul_x.F gad_osc_mul_y.F gad_plm_fun.F gad_ppm_adv_r.F gad_ppm_adv_x.F gad_ppm_adv_y.F gad_ppm_flx_r.F gad_ppm_flx_x.F gad_ppm_flx_y.F gad_ppm_fun.F gad_ppm_hat_r.F gad_ppm_hat_x.F gad_ppm_hat_y.F gad_ppm_p3e_r.F gad_ppm_p3e_x.F gad_ppm_p3e_y.F gad_pqm_adv_r.F gad_pqm_adv_x.F gad_pqm_adv_y.F gad_pqm_flx_r.F gad_pqm_flx_x.F gad_pqm_flx_y.F gad_pqm_fun.F gad_pqm_hat_r.F gad_pqm_hat_x.F gad_pqm_hat_y.F gad_pqm_p5e_r.F gad_pqm_p5e_x.F gad_pqm_p5e_y.F gad_read_pickup.F gad_som_advect.F gad_som_adv_r.F gad_som_adv_x.F gad_som_adv_y.F gad_som_exchanges.F gad_som_fill_cs_corner.F gad_som_lim_r.F gad_som_prep_cs_corner.F gad_u3_adv_r.F gad_u3_adv_x.F gad_u3_adv_y.F gad_u3c4_impl_r.F gad_write_pickup.F salt_fill.F mdsio_buffertorl.F mdsio_buffertors.F mdsio_check4file.F mdsio_facef_read.F mdsio_gl.F mdsio_gl_slice.F mdsio_pass_r4torl.F mdsio_pass_r4tors.F mdsio_pass_r8torl.F mdsio_pass_r8tors.F mdsio_rd_rec_rl.F mdsio_rd_rec_rs.F mdsio_read_field.F mdsio_read_meta.F mdsio_read_section.F mdsio_read_tape.F mdsio_readvec_loc.F mdsio_read_whalos.F mdsio_rw_field.F mdsio_rw_slice.F mdsio_seg4torl.F mdsio_seg4tors.F mdsio_seg8torl.F mdsio_seg8tors.F mdsio_segxtorx_2d.F mdsio_write_field.F mdsio_writelocal.F mdsio_write_meta.F mdsio_write_section.F mdsio_write_tape.F mdsio_writevec_loc.F mdsio_write_whalos.F mdsio_wr_metafiles.F mdsio_wr_rec_rl.F mdsio_wr_rec_rs.F mom_calc_3d_strain.F mom_calc_absvort3.F mom_calc_hdiv.F mom_calc_hfacz.F mom_calc_ke.F mom_calc_relvort3.F mom_calc_smag_3d.F mom_calc_strain.F mom_calc_tension.F mom_calc_visc.F mom_diagnostics_init.F mom_hdissip.F mom_init_fixed.F mom_quasihydrostatic.F mom_u_botdrag_coeff.F mom_u_coriolis_nh.F mom_u_implicit_r.F mom_u_metric_nh.F mom_u_rviscflux.F mom_u_sidedrag.F mom_uv_smag_3d.F mom_v_botdrag_coeff.F mom_v_coriolis_nh.F mom_v_implicit_r.F mom_visc_qgl_limit.F mom_visc_qgl_stretch.F mom_v_metric_nh.F mom_v_rviscflux.F mom_v_sidedrag.F mom_w_coriolis_nh.F mom_w_metric_nh.F mom_w_sidedrag.F mom_w_smag_3d.F mom_calc_rtrans.F mom_fluxform.F mom_u_adv_uu.F mom_u_adv_vu.F mom_u_adv_wu.F mom_u_coriolis.F mom_u_del2u.F mom_u_metric_cylinder.F mom_u_metric_sphere.F mom_uv_boundary.F mom_u_xviscflux.F mom_u_yviscflux.F mom_v_adv_uv.F mom_v_adv_vv.F mom_v_adv_wv.F mom_v_coriolis.F mom_v_del2v.F mom_v_metric_cylinder.F mom_v_metric_sphere.F mom_v_xviscflux.F mom_v_yviscflux.F mom_vecinv.F mom_vi_coriolis.F mom_vi_del2uv.F mom_vi_hdissip.F mom_vi_u_coriolis_c4.F mom_vi_u_coriolis.F mom_vi_u_grad_ke.F mom_vi_u_vertshear.F mom_vi_v_coriolis_c4.F mom_vi_v_coriolis.F mom_vi_v_grad_ke.F mom_vi_v_vertshear.F mon_advcfl.F mon_advcflw2.F mon_advcflw.F mon_calc_advcfl.F mon_calc_stats_rl.F mon_calc_stats_rs.F mon_init.F monitor_ad.F monitor.F monitor_g.F mon_ke.F mon_out.F mon_printstats_rl.F mon_printstats_rs.F mon_set_iounit.F mon_set_pref.F mon_solution.F mon_stats_latbnd_rl.F mon_stats_rl.F mon_stats_rs.F mon_surfcor.F mon_vort3.F mon_writestats_rl.F mon_writestats_rs.F obcs_add_tides.F obcs_adjust.F obcs_adjust_uvice.F obcs_apply_eta.F obcs_apply_ptracer.F obcs_apply_r_star.F obcs_apply_seaice.F obcs_apply_surf_dr.F obcs_apply_ts.F obcs_apply_uv.F obcs_apply_uvice.F obcs_apply_w.F obcs_balance_flow.F obcs_calc.F obcs_calc_stevens.F obcs_check_depths.F obcs_check.F obcs_copy_tracer.F obcs_copy_uv_n.F obcs_diag_balance.F obcs_exchanges.F obcs_exf_load.F obcs_fields_load.F obcs_init_fixed.F obcs_init_variables.F obcs_monitor.F obcs_mon_stats.F obcs_output.F obcs_prescribe_read.F obcs_readparms.F obcs_read_pickup.F obcs_save_uv_n.F obcs_seaice_sponge.F obcs_set_connect.F obcs_sponge.F obcs_u1_adv_tracer.F obcs_write_pickup.F orlanski_east.F orlanski_init.F orlanski_north.F orlanski_south.F orlanski_west.F get_write_global_fld.F read_fld_xy_rl.F read_fld_xy_rs.F read_fld_xyz_rl.F read_fld_xyz_rs.F read_glvec_rl.F read_glvec_rs.F read_mflds.F read_rec.F rw_get_suffix.F set_write_global_fld.F write_fld_3d_rl.F write_fld_3d_rs.F write_fld_s3d_rl.F write_fld_s3d_rs.F write_fld_xy_rl.F write_fld_xy_rs.F write_fld_xyz_rl.F write_fld_xyz_rs.F write_glvec_rl.F write_glvec_rs.F write_local_rl.F write_local_rs.F write_rec.F shelfice_check.F shelfice_cost_accumulate.F shelfice_cost_final.F shelfice_cost_shifwflx.F shelfice_diagnostics_drag.F shelfice_forcing.F shelfice_forcing_surf.F shelfice_init_depths.F shelfice_init_fixed.F shelfice_init_varia.F shelfice_mask_seaice.F shelfice_mnc_init.F shelfice_output.F shelfice_readparms.F shelfice_read_pickup.F shelfice_remesh_calc_w.F shelfice_remesh_c_mask.F shelfice_remeshing.F shelfice_remesh_state.F shelfice_remesh_uv_mask.F shelfice_step_icemass.F shelfice_thermodynamics.F shelfice_u_drag_coeff.F shelfice_v_drag_coeff.F shelfice_write_pickup.F timeave_cumul_1k1t.F timeave_cumul_1t.F timeave_cumul_1vfc.F timeave_cumul_2v.F timeave_cumul_2vfc.F timeave_cumulate.F timeave_cumul_dif_1t.F timeave_init_fixed.F timeave_norma_2v.F timeave_normalize.F timeave_reset.F timeave_statvars.F timeave_statv_write.F timeave_surf_flux.F all_proc_die.F bar2.F bar_check.F barrier.F check_threads.F comm_stats.F cumulsum_z_tile.F different_multiple.F diff_phase_multiple.F eeboot.F eedata_example.F eeintro_msg.F eeset_parms.F eewrite_eeenv.F exch0_r4.F exch0_r8.F exch0_rl.F exch0_rs.F exch1_bg_r4_cube.F exch1_bg_r8_cube.F exch1_bg_rl_cube.F exch1_bg_rs_cube.F exch1_r4_cube.F exch1_r4.F exch1_r8_cube.F exch1_r8.F exch1_rl_ad.F exch1_rl_cube_ad.F exch1_rl_cube.F exch1_rl.F exch1_rs_ad.F exch1_rs_cube_ad.F exch1_rs_cube.F exch1_rs.F exch1_uv_r4_cube.F exch1_uv_r8_cube.F exch1_uv_rl_cube.F exch1_uv_rs_cube.F exch1_z_r4_cube.F exch1_z_r8_cube.F exch1_z_rl_cube.F exch1_z_rs_cube.F exch_3d_r4.F exch_3d_r8.F exch_3d_rl.F exch_3d_rs.F exch_cycle_ebl.F exch_init.F exch_r4_recv_get_x.F exch_r4_recv_get_y.F exch_r4_send_put_x.F exch_r4_send_put_y.F exch_r8_recv_get_x.F exch_r8_recv_get_y.F exch_r8_send_put_x.F exch_r8_send_put_y.F exch_rl_recv_get_x.F exch_rl_recv_get_y.F exch_rl_send_put_x.F exch_rl_send_put_y.F exch_rs_recv_get_x.F exch_rs_recv_get_y.F exch_rs_send_put_x.F exch_rs_send_put_y.F exch_s3d_r4.F exch_s3d_r8.F exch_s3d_rl.F exch_s3d_rs.F exch_sm_3d_r4.F exch_sm_3d_r8.F exch_sm_3d_rl.F exch_sm_3d_rs.F exch_uv_3d_r4.F exch_uv_3d_r8.F exch_uv_3d_rl.F exch_uv_3d_rs.F exch_uv_agrid_3d_r4.F exch_uv_agrid_3d_r8.F exch_uv_agrid_3d_rl.F exch_uv_agrid_3d_rs.F exch_uv_bgrid_3d_r4.F exch_uv_bgrid_3d_r8.F exch_uv_bgrid_3d_rl.F exch_uv_bgrid_3d_rs.F exch_uv_dgrid_3d_r4.F exch_uv_dgrid_3d_r8.F exch_uv_dgrid_3d_rl.F exch_uv_dgrid_3d_rs.F exch_uv_xy_r4.F exch_uv_xy_r8.F exch_uv_xy_rl.F exch_uv_xy_rs.F exch_uv_xyz_r4.F exch_uv_xyz_r8.F exch_uv_xyz_rl.F exch_uv_xyz_rs.F exch_xy_r4.F exch_xy_r8.F exch_xy_rl.F exch_xy_rs.F exch_xyz_r4.F exch_xyz_r8.F exch_xyz_rl.F exch_xyz_rs.F exch_z_3d_r4.F exch_z_3d_r8.F exch_z_3d_rl.F exch_z_3d_rs.F fill_cs_corner_ag_rl.F fill_cs_corner_tr_rl.F fill_cs_corner_uv_rl.F fill_cs_corner_uv_rs.F fool_the_compiler.F gather_2d_r4.F gather_2d_r8.F gather_2d_wh_r4.F gather_2d_wh_r8.F gather_vec_r4.F gather_vec_r8.F gather_xz.F gather_yz.F get_periodic_interval.F global_max.F global_sum.F global_sum_singlecpu.F global_sum_tile.F global_vec_sum.F gsum.F ini_communication_patterns.F ini_procs.F ini_threading_environment.F lef_zero.F main.F master_cpu_io.F master_cpu_thread.F mds_byteswapi4.F mds_byteswapr4.F mds_byteswapr8.F mdsfindunit.F mds_flush.F mds_reclen.F memsync.F nml_change_syntax.F nml_set_terminator.F open_copy_data_file.F print.F reset_halo.F scatter_2d_r4.F scatter_2d_r8.F scatter_2d_wh_r4.F scatter_2d_wh_r8.F scatter_vec_r4.F scatter_vec_r8.F scatter_xz.F scatter_yz.F stop_if_error.F timers.F utils.F write_utils.F adams_bashforth2.F adams_bashforth3.F add_walls2masks.F apply_forcing.F calc_3d_diffusivity.F calc_adv_flow.F calc_div_ghat.F calc_eddy_stress.F calc_grad_phi_fv.F calc_grad_phi_hyd.F calc_grad_phi_surf.F calc_grid_angles.F calc_gw.F calc_ivdc.F calc_oce_mxlayer.F calc_phi_hyd.F calc_r_star.F calc_surf_dr.F calc_viscosity.F calc_wsurf_tr.F cg2d_ex0.F cg2d.F cg2d_nsa.F cg2d_sr.F cg3d_ex0.F cg3d.F check_pickup.F config_check.F config_summary.F convective_adjustment.F convective_adjustment_ini.F convectively_mixtracer.F convective_weights.F correction_step.F cycle_ab_tracer.F cycle_tracer.F diags_oceanic_surf_flux.F diags_phi_hyd.F diags_phi_rlow.F diags_rho.F diags_sound_speed.F do_atmospheric_phys.F do_fields_blocking_exchanges.F do_stagger_fields_exchanges.F do_statevars_diags.F do_statevars_tave.F do_the_model_io.F do_write_pickup.F dynamics.F external_fields_load.F external_forcing.F external_forcing_surf.F find_alpha.F find_hyd_press_1d.F find_rho.F forcing_surf_relax.F forward_step.F freesurf_rescale_g.F freeze_surface.F grad_sigma.F gsw_teos10.F impldiff.F ini_cartesian_grid.F ini_cg2d.F ini_cg3d.F ini_cori.F ini_curvilinear_grid.F ini_cylinder_grid.F ini_depths.F ini_dynvars.F ini_eos.F ini_ffields.F ini_fields.F ini_forcing.F ini_global_domain.F ini_grid.F ini_linear_phisurf.F ini_local_grid.F ini_masks_etc.F ini_mixing.F ini_mnc_vars.F ini_model_io.F ini_nh_fields.F ini_nh_vars.F ini_nlfs_vars.F ini_parms.F ini_p_ground.F ini_pressure.F ini_psurf.F ini_salt.F ini_sigma_hfac.F ini_spherical_polar_grid.F ini_theta.F initialise_fixed.F initialise_varia.F ini_vel.F ini_vertical_grid.F integrate_for_w.F integr_continuity.F load_fields_driver.F load_grid_spacing.F load_ref_files.F main_do_loop.F momentum_correction_step.F packages_boot.F packages_check.F packages_error_msg.F packages_init_fixed.F packages_init_variables.F packages_print_msg.F packages_readparms.F packages_unused_msg.F packages_write_pickup.F plot_field.F port_rand.F post_cg3d.F pre_cg3d.F pressure_for_eos.F read_pickup.F remove_mean.F reset_nlfs_vars.F rotate_spherical_polar_grid.F rotate_uv2en.F salt_integrate.F seawater.F set_defaults.F set_grid_factors.F set_parms.F set_ref_state.F solve_for_pressure.F solve_pentadiagonal.F solve_tridiagonal.F solve_uv_tridiago.F state_summary.F swfrac.F taueddy_init_varia.F taueddy_tendency_apply.F temp_integrate.F the_main_loop.F the_model_main.F thermodynamics.F timestep.F timestep_tracer.F timestep_wvel.F tracers_correction_step.F tracers_iigw_correction.F turnoff_model_io.F update_cg2d.F update_etah.F update_etaws.F update_masks_etc.F update_r_star.F update_sigma.F update_surf_dr.F write_grid.F write_pickup.F write_state.F
Appending dependencies to Makefile
/home/jenkins/workspace/Debian_Linux-Ice-Ocean/test/NightlyRun/../MITgcm/../MITgcm/install/tools/f90mkdepend &gt;&gt; Makefile
WARNING: f90mkdepend: no source file found for module a
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WARNING: f90mkdepend: no source file found for module `petsccount_fmt`
WARNING: f90mkdepend: no source file found for module of
WARNING: f90mkdepend: no source file found for module `tssettype()`
WARNING: f90mkdepend: no source file found for module `petscviewerfilesetmode()`
rm -f makedepend.out

[41;37m   step #6: RunUncoupledMITgcm   [0m

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[41;37m   step #7: CreateMesh   [0m

Info: creating coordinates in polar stereographic (Std Latitude: 71S Meridian: 0)
saving model as: Models/IceOcean.CreateMesh

[41;37m   step #8: MeshGeometry   [0m

saving model as: Models/IceOcean.MeshGeometry

[41;37m   step #9: ParameterizeIce   [0m

saving model as: Models/IceOcean.ParameterizeIce

[41;37m   step #10: RunUncoupledISSM   [0m

checking model consistency
marshalling file test4001.bin
uploading input file and queuing script
launching solution sequence on remote cluster
/home/jenkins/workspace/Debian_Linux-Ice-Ocean//etc/environment.sh: line 329: syntax error in conditional expression
loading results from cluster
cp: cannot stat '/home/jenkins/workspace/Debian_Linux-Ice-Ocean//execution/test4001-09-03-2025-10-46-10-2177023//test4001.outlog': No such file or directory
cp: cannot stat '/home/jenkins/workspace/Debian_Linux-Ice-Ocean//execution/test4001-09-03-2025-10-46-10-2177023//test4001.errlog': No such file or directory
cp: cannot stat '/home/jenkins/workspace/Debian_Linux-Ice-Ocean//execution/test4001-09-03-2025-10-46-10-2177023//test4001.outbin': No such file or directory
Error using loadresultsfromdisk

=========================================================================
   Binary file test4001.outbin not found

   This typically results from an error encountered during the simulation
   Please check for error messages above or in the outlog
=========================================================================


Error in loadresultsfromcluster (line 50)
md=loadresultsfromdisk(md,[md.miscellaneous.name '.outbin']);

Error in solve (line 180)
	md=loadresultsfromcluster(md);

Error in test4001 (line 556)
    md=solve(md,'Transient');

Error in run (line 99)
evalin('caller', strcat(script, ';'));

Error in runme (line 156)
		run(['test' num2str(id)]);

Error in matlab_run2 (line 3)
			runme('benchmark','all','id',[4001],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 4001 test name: IceOcean field: N/A
----------------finished:4001-----------------------
MATLABEXITEDCORRECTLY
-----------End of matlab_log.log-----------
Build step 'Execute shell' marked build as failure
Recording test results
Finished: FAILURE