Standard Output
+++ Running case: Example-Greenland
+++ working dir: /Users/jenkins/workspace/macOS-Intel-Examples/nightlylog
| < M A T L A B (R) >
| Copyright 1984-2023 The MathWorks, Inc.
| R2023b Update 6 (23.2.0.2485118) 64-bit (maci64)
| December 28, 2023
|
| To get started, type doc.
| For product information, visit www.mathworks.com.
|
| ISSM development path correctly loaded
| Step 1: Mesh creation
| Anisotropic mesh adaptation
| WARNING: mesh present but no geometry found. Reconstructing...
| new number of triangles = 6345
| Step 2: Parameterization
| Loading SeaRISE data from NetCDF
| Interpolating surface and bedrock
| Constructing thickness
| Interpolating velocities
| Interpolating temperatures
| Interpolating surface mass balance
| Construct basal friction parameters
| Construct ice rheological properties
| [Warning: paterson is outdated, please consider using cuffey instead]
| [> In paterson (line 10)
| In TemporaryParameterFile8280 (line 54)
| In parameterize (line 29)
| In runme (line 41)]
| Set other boundary conditions
| Set geothermal heat flux
| Set Pressure
| Single point constraints
| Step 3: Control method friction
| checking model consistency
| INFO: the outlog will look better if only md.verbose.control is turned on
| marshalling file SeaRISEgreenland.bin
| uploading input file and queuing script
| launching solution sequence on remote cluster
| Ice-sheet and Sea-level System Model (ISSM) version 4.24
| (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)
| call computational core:
| preparing initial solution
| x | Cost function f(x) | List of contributions
| ====================== step 1/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 59172.79 | 7092.887 52079.9 6.085212e-32
| x = 1 | f(x) = 50954.87 | 3600.244 47354.58 0.04587451
| ====================== step 2/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 50953.45 | 3598.809 47354.6 0.04587451
| x = 1 | f(x) = 44978.74 | 2137.679 42840.82 0.2370654
| ====================== step 3/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 44987.02 | 2146.197 42840.58 0.2370654
| x = 1 | f(x) = 44425.8 | 2044.873 42380.66 0.2722667
| ====================== step 4/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 44432.36 | 2051.851 42380.24 0.2722667
| x = 1 | f(x) = 42775.97 | 1747.394 41028.16 0.4148691
| ====================== step 5/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 42783.98 | 1756.726 41026.84 0.4148691
| x = 1 | f(x) = 41876.1 | 1659.336 40216.23 0.5302616
| ====================== step 6/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 41885.98 | 1670.347 40215.1 0.5302616
| x = 1 | f(x) = 40869.39 | 1561.173 39307.52 0.6932322
| ====================== step 7/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 40870.91 | 1563.273 39306.95 0.6932322
| x = 1 | f(x) = 39697.76 | 1338.256 38358.58 0.9236775
| ====================== step 8/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 39697.43 | 1338.655 38357.85 0.9236775
| x = 1 | f(x) = 39040.22 | 1208.675 37830.47 1.071791
| ====================== step 9/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 39039.49 | 1208.558 37829.86 1.071791
| x = 1 | f(x) = 38556.09 | 1126.764 37428.13 1.191478
| ====================== step 10/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 38552.98 | 1124.507 37427.28 1.191478
| x = 1 | f(x) = 38121.56 | 1092.495 37027.74 1.3288
| ====================== step 11/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 38122.77 | 1094.958 37026.49 1.3288
| x = 1 | f(x) = 37729.41 | 1149.628 36578.29 1.493932
| ====================== step 12/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 37740.46 | 1159.142 36579.82 1.493932
| x = 1 | f(x) = 37487.92 | 1087.186 36399.14 1.592633
| x = 0.381966 | f(x) = 37611.19 | 1112.303 36497.36 1.529775
| x = 0.618034 | f(x) = 37561.1 | 1101.089 36458.46 1.55338
| x = 0.763932 | f(x) = 37530.94 | 1093.798 36435.58 1.568476
| x = 0.854102 | f(x) = 37512.65 | 1089.499 36421.58 1.577683
| x = 0.90983 | f(x) = 37501.45 | 1086.979 36412.88 1.583344
| ====================== step 13/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 37484.86 | 1084.592 36398.67 1.592633
| x = 1 | f(x) = 37022.46 | 1018.285 36002.41 1.768007
| ====================== step 14/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 37030.9 | 1026.085 36003.05 1.768007
| x = 1 | f(x) = 36814.89 | 1058.135 35754.9 1.859438
| x = 0.381966 | f(x) = 36898.13 | 989.5907 35906.74 1.799676
| x = 0.618034 | f(x) = 36853.98 | 1003.884 35848.28 1.821225
| x = 0.763932 | f(x) = 36838.62 | 1025.038 35811.75 1.835325
| x = 0.937069 | f(x) = 36824.08 | 1052.478 35769.75 1.852853
| x = 0.870937 | f(x) = 36839.21 | 1051.966 35785.4 1.846056
| ====================== step 15/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 36824.8 | 1068.389 35754.55 1.859438
| x = 1 | f(x) = 36559.07 | 954.0377 35603.09 1.936544
| x = 0.381966 | f(x) = 36711.5 | 1017.403 35692.21 1.887487
| x = 0.618034 | f(x) = 36653.71 | 995.7569 35656.05 1.905392
| x = 0.763932 | f(x) = 36614.76 | 978.0481 35634.8 1.916939
| x = 0.854102 | f(x) = 36589.85 | 965.9689 35621.95 1.92432
| x = 0.90983 | f(x) = 36574.06 | 958.1749 35613.95 1.928974
| ====================== step 16/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 36552.27 | 948.6767 35601.65 1.936544
| x = 1 | f(x) = 36368.74 | 909.4905 35457.24 2.009954
| x = 0.381966 | f(x) = 36450.66 | 912.2196 35536.48 1.964688
| x = 0.618034 | f(x) = 36415.28 | 905.8741 35507.42 1.981913
| x = 0.763932 | f(x) = 36394.68 | 904.2792 35488.41 1.992565
| x = 0.854102 | f(x) = 36384.31 | 906.0028 35476.31 1.999281
| x = 0.90983 | f(x) = 36379.73 | 908.9319 35468.79 2.003357
| ====================== step 17/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 36373.34 | 914.7542 35456.58 2.009954
| x = 1 | f(x) = 36229.12 | 957.6674 35269.34 2.111313
| x = 0.381966 | f(x) = 36289.06 | 905.1848 35381.82 2.046875
| x = 0.618034 | f(x) = 36257.86 | 916.5034 35339.28 2.070593
| x = 0.763932 | f(x) = 36247.49 | 932.6872 35312.72 2.085785
| x = 0.913021 | f(x) = 36239.38 | 951.6387 35285.64 2.101794
| x = 0.856074 | f(x) = 36249.62 | 951.977 35295.55 2.095621
| ====================== step 18/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 36238.23 | 966.1893 35269.93 2.111313
| x = 1 | f(x) = 36005.81 | 893.306 35110.31 2.18899
| x = 0.381966 | f(x) = 36142.54 | 929.6447 35210.76 2.139784
| x = 0.618034 | f(x) = 36093.23 | 916.1558 35174.92 2.158128
| x = 0.763932 | f(x) = 36058.58 | 905.5225 35150.89 2.16975
| x = 0.854102 | f(x) = 36036.9 | 898.7214 35136 2.177043
| x = 0.90983 | f(x) = 36023.73 | 894.6151 35126.93 2.18159
| ====================== step 19/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 36005.22 | 890.2107 35112.82 2.18899
| x = 1 | f(x) = 35868.42 | 869.9581 34996.18 2.287732
| x = 0.381966 | f(x) = 35911.39 | 860.1821 35048.98 2.225541
| x = 0.618034 | f(x) = 35893.04 | 858.0691 35032.72 2.249067
| x = 0.763932 | f(x) = 35881.94 | 859.7353 35019.94 2.263658
| x = 0.854102 | f(x) = 35877.04 | 863.763 35011.01 2.272799
| x = 0.90983 | f(x) = 35875.47 | 868.0771 35005.11 2.278502
| ====================== step 20/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 35873.35 | 875.6681 34995.4 2.287732
| x = 1 | f(x) = 35723.35 | 910.5513 34810.43 2.374027
| x = 0.381966 | f(x) = 35789.66 | 860.5594 34926.79 2.319061
| x = 0.618034 | f(x) = 35757.04 | 868.789 34885.91 2.339232
| x = 0.763932 | f(x) = 35744.03 | 883.7317 34857.95 2.352231
| x = 0.854102 | f(x) = 35739.94 | 897.5494 34840.03 2.360435
| x = 0.930997 | f(x) = 35737.52 | 910.28 34824.87 2.367548
| ====================== step 21/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 35735.84 | 922.2347 34811.23 2.374027
| x = 1 | f(x) = 35602.51 | 870.7784 34729.3 2.423398
| x = 0.381966 | f(x) = 35668.82 | 880.0971 34786.33 2.391628
| x = 0.618034 | f(x) = 35644.9 | 872.7159 34769.79 2.403223
| x = 0.763932 | f(x) = 35629.08 | 870.0702 34756.6 2.410606
| x = 0.854102 | f(x) = 35618.25 | 868.4465 34747.39 2.415368
| x = 0.90983 | f(x) = 35610.89 | 867.4925 34740.98 2.418388
| ====================== step 22/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 35599.85 | 867.5045 34729.92 2.423398
| x = 1 | f(x) = 35435.33 | 841.7746 34591.04 2.515761
| x = 0.381966 | f(x) = 35503.09 | 830.83 34669.8 2.457304
| x = 0.618034 | f(x) = 35463.09 | 825.8312 34634.77 2.479098
| x = 0.763932 | f(x) = 35440.81 | 828.0732 34610.24 2.492898
| x = 0.854102 | f(x) = 35432.56 | 834.5397 34595.51 2.501553
| x = 0.90983 | f(x) = 35438.35 | 841.9242 34593.91 2.50695
| ====================== step 23/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 35439.26 | 840.4865 34596.27 2.501553
| x = 1 | f(x) = 35377.76 | 827.9224 34547.29 2.55107
| x = 0.381966 | f(x) = 35416.76 | 819.8319 34594.41 2.518729
| x = 0.618034 | f(x) = 35399.79 | 819.4099 34577.85 2.530419
| x = 0.763932 | f(x) = 35393.8 | 822.2266 34569.04 2.538053
| x = 0.944311 | f(x) = 35386.99 | 828.3333 34556.1 2.547926
| x = 0.875412 | f(x) = 35393.31 | 829.0397 34561.73 2.544098
| ====================== step 24/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 35389.04 | 833.3281 34553.17 2.55107
| x = 1 | f(x) = 35252.08 | 814.3329 34435.09 2.649674
| x = 0.381966 | f(x) = 35317.08 | 812.9779 34501.52 2.588143
| x = 0.618034 | f(x) = 35288.37 | 809.7173 34476.04 2.61163
| x = 0.763932 | f(x) = 35271.33 | 809.3561 34459.34 2.626303
| x = 0.854102 | f(x) = 35263.63 | 811.1878 34449.81 2.635229
| x = 0.90983 | f(x) = 35260.58 | 813.8446 34444.09 2.640722
| ====================== step 25/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 35256.61 | 818.875 34435.09 2.649674
| x = 1 | f(x) = 35162.53 | 858.2917 34301.5 2.735674
| x = 0.381966 | f(x) = 35180.62 | 812.9344 34365.01 2.680863
| x = 0.618034 | f(x) = 35153.13 | 821.9688 34328.46 2.70132
| x = 0.763932 | f(x) = 35158.4 | 837.0536 34318.64 2.714144
| x = 0.645764 | f(x) = 35167.63 | 833.3937 34331.53 2.703725
| x = 0.527864 | f(x) = 35170.22 | 824.2445 34343.28 2.693581
| ====================== step 26/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 35160.91 | 827.0906 34331.12 2.70132
| x = 1 | f(x) = 35121.46 | 799.684 34319.05 2.727665
| x = 0.381966 | f(x) = 35148.31 | 811.724 34333.88 2.710515
| x = 0.618034 | f(x) = 35139.87 | 807.59 34329.56 2.716724
| x = 0.763932 | f(x) = 35133.07 | 803.7529 34326.59 2.720772
| x = 0.854102 | f(x) = 35127.96 | 801.0177 34324.22 2.723355
| x = 0.90983 | f(x) = 35124.32 | 799.2116 34322.38 2.724982
| ====================== step 27/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 35118.96 | 797.3033 34318.93 2.727665
| x = 1 | f(x) = 34992.02 | 809.2473 34179.94 2.83274
| x = 0.381966 | f(x) = 35054.03 | 790.9421 34260.32 2.766221
| x = 0.618034 | f(x) = 35029.19 | 793.4467 34232.95 2.790923
| x = 0.763932 | f(x) = 35015.11 | 799.2228 34213.08 2.806626
| x = 0.854102 | f(x) = 35009.1 | 806.1054 34200.18 2.816498
| x = 0.90983 | f(x) = 35007.39 | 812.5978 34191.97 2.822662
| ====================== step 28/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 35004.33 | 822.0412 34179.46 2.83274
| x = 1 | f(x) = 34934.88 | 806.5678 34125.44 2.869503
| x = 0.381966 | f(x) = 34947.18 | 786.7802 34157.55 2.846461
| x = 0.618034 | f(x) = 34937.14 | 788.8934 34145.39 2.855038
| x = 0.763932 | f(x) = 34935.72 | 795.0422 34137.81 2.860446
| x = 0.748014 | f(x) = 34937.95 | 796.5469 34138.55 2.859852
| x = 0.854102 | f(x) = 34938.58 | 802.5732 34133.15 2.863852
| ====================== step 29/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 34941.31 | 812.7683 34125.67 2.869503
| x = 1 | f(x) = 34824.79 | 779.5763 34042.27 2.935687
| x = 0.381966 | f(x) = 34880.05 | 788.149 34089 2.894429
| x = 0.618034 | f(x) = 34858.61 | 784.1178 34071.58 2.91001
| x = 0.763932 | f(x) = 34843.89 | 780.8721 34060.1 2.919793
| x = 0.854102 | f(x) = 34835.34 | 779.3897 34053.02 2.925885
| x = 0.90983 | f(x) = 34830.75 | 779.0447 34048.77 2.929612
| ====================== step 30/30 ===============================
| x = 0 | computing velocities
| computing adjoint
| saving results
| f(x) = 34824.91 | 779.6845 34042.29 2.935687
| x = 1 | f(x) = 34721.73 | 773.8241 33944.9 3.01281
| x = 0.381966 | f(x) = 34777.78 | 771.9945 34002.82 2.964705
| x = 0.618034 | f(x) = 34756.76 | 772.5225 33981.26 2.983077
| x = 0.763932 | f(x) = 34743.45 | 772.8106 33967.65 2.99436
| x = 0.854102 | f(x) = 34735.33 | 773.2079 33959.12 3.0014
| x = 0.90983 | f(x) = 34730.47 | 773.6098 33953.85 3.005761
| preparing final solution
| computing new velocity
| write lock file:
| FemModel initialization elapsed time: 0.158927
| Total Core solution elapsed time: 92.668
| Linear solver elapsed time: 48.4322 (52%)
| Total elapsed time: 0 hrs 1 min 32 sec
| loading results from cluster
| Step 4: Transient run
| checking model consistency
| marshalling file SeaRISEgreenland.bin
| uploading input file and queuing script
| launching solution sequence on remote cluster
| Ice-sheet and Sea-level System Model (ISSM) version 4.24
| (website: http://issm.jpl.nasa.gov forum: https://issm.ess.uci.edu/forum/)
| Input updates from constant
| Input updates from constant
| [0]PETSC ERROR: ------------------------------------------------------------------------
| [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range
| [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger
| [0]PETSC ERROR: or see https://petsc.org/release/faq/#valgrind and https://petsc.org/release/faq/
| [0]PETSC ERROR: configure using --with-debugging=yes, recompile, link, and run
| [0]PETSC ERROR: to get more information on the crash.
| [0]PETSC ERROR: Run with -malloc_debug to check if memory corruption is causing the crash.
| application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0
| loading results from cluster
| cp: /Users/jenkins/workspace/macOS-Intel-Examples//execution/SeaRISEgreenland-07-22-2025-01-29-49-8280//SeaRISEgreenland.outbin: No such file or directory
| Error using loadresultsfromdisk
| =========================================================================
| Binary file SeaRISEgreenland.outbin not found
| This typically results from an error encountered during the simulation
| Please check for error messages above or in the outlog
| =========================================================================
| Error in loadresultsfromcluster (line 50)
| md=loadresultsfromdisk(md,[md.miscellaneous.name '.outbin']);
| Error in solve (line 180)
| md=loadresultsfromcluster(md);
| Error in runme (line 111)
| md=solve(md,'Transient');FAILURE
+++ exit code: 0
