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Started by user Justin Quinn Running as SYSTEM Building remotely on Debian_12-VM (debian linux) in workspace /home/jenkins/workspace/Debian_Linux-CoDiPack The recommended git tool is: NONE using credential 8a8ab078-37c9-42a1-9ae9-29f73031037c Cloning the remote Git repository Cloning repository git@github.com:ISSMteam/ISSM.git > git init /home/jenkins/workspace/Debian_Linux-CoDiPack # timeout=10 Fetching upstream changes from git@github.com:ISSMteam/ISSM.git > git --version # timeout=10 > git --version # 'git version 2.39.2' using GIT_SSH to set credentials GitHub Deploy Key - ISSMdevteam/ISSM-Development - Jenkins Verifying host key using known hosts file > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/main^{commit} # timeout=10 Checking out Revision 48a9b978de796f47f5ea32917606fed3b60be4e5 (refs/remotes/origin/main) > git config core.sparsecheckout # timeout=10 > git checkout -f 48a9b978de796f47f5ea32917606fed3b60be4e5 # timeout=10 Commit message: "CHG: adding other way to download ISSM from GitHub" > git rev-list --no-walk 51f9f8d24aff8ea2973a83eb0df203f2c6e9c31a # timeout=10 [Debian_Linux-CoDiPack] $ /bin/bash /tmp/jenkins10964470261273157448.sh Cleaning up execution directory ====================================================== Determining Installation type ====================================================== Previous revision not found, this must be a fresh install -- checking for changed externalpackages... yes -- checking for reconfiguration... yes -- checking for recompilation... yes Recording current svn version: ====================================================== Installing autotools ====================================================== ====================================================== Installing cmake ====================================================== ====================================================== Installing petsc ====================================================== ====================================================== Installing gsl ====================================================== ====================================================== Installing triangle ====================================================== ====================================================== Installing m1qn3 ====================================================== ====================================================== Installing medipack ====================================================== ====================================================== Installing codipack ====================================================== ====================================================== Installing semic ====================================================== ====================================================== Installing shell2junit ====================================================== ====================================================== Cleaning up and reconfiguring ====================================================== make: *** No rule to make target 'uninstall'. Stop. make: *** No rule to make target 'distclean'. Stop. autoreconf: Entering directory `.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force -I m4 autoreconf: configure.ac: tracing autoreconf: configure.ac: creating directory ./aux-config autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, './aux-config'. libtoolize: copying file './aux-config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' autoreconf: running: /home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/autotools/install/bin/autoconf --force autoreconf: running: /home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/autotools/install/bin/autoheader --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:27: installing './aux-config/ar-lib' configure.ac:17: installing './aux-config/compile' configure.ac:14: installing './aux-config/config.guess' configure.ac:14: installing './aux-config/config.sub' configure.ac:24: installing './aux-config/install-sh' configure.ac:24: installing './aux-config/missing' src/c/Makefile.am: installing './aux-config/depcomp' autoreconf: Leaving directory `.' configure: ============================================================================ configure: = Ice-sheet and Sea-level System Model (ISSM) 4.24 configuration = configure: ============================================================================ checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking for icc... no checking for cl... no checking for icl... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking how to run the C preprocessor... gcc -E checking for icpc... no checking for cl... no checking for icl... no checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for ifort... no checking for g77... no checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking for ifort... no checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of gcc... gcc3 checking dependency style of g++... gcc3 checking whether make supports nested variables... (cached) yes checking for ar... ar checking the archiver (ar) interface... ar checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: ============================================================================ configure: = Checking ISSM specific options = configure: ============================================================================ checking for date... /usr/bin/date checking for build date... Thu May 30 12:06:48 PDT 2024 checking user name... jenkins checking host full OS name and version... linux checking host cpu... x86_64 checking vendor... pc checking host OS name... linux checking host OS version... 6.1.0-21-amd64 checking host OS architecture... x86_64 checking for debugging support... yes checking for development support... yes checking for standalone modules build... no checking for standalone executables build... no checking for standalone libraries build... no checking for wrappers compilation... yes checking if this is a Mac build... no checking if system copy of libc has fmemopen... yes checking for vendor compilers... done checking if this is a MSVC (Windows) build... no checking if this is a MSYS2 (Windows) build... no checking for MATLAB... yes checking MATLAB's mex compilation flags... done checking for JavaScript... no checking for triangle... yes checking for Boost... no checking for Dakota... no checking for Python... no checking for python-numpy... no checking for Chaco... no checking for ESMF... no checking for CoDiPack... yes checking for CoDiPack version... 2.2 checking for tape allocation... yes checking for ADOL-C... no checking for ADOL-C version... 2 checking for ADIC2... no checking for ATLAS and CBLAS libraries... no checking for GSL... yes checking for AMPI... no checking for Adjoint MPI... no checking for MeDiPack... yes checking for HDF5 libraries... no checking for PETSc... no checking for MPI... yes checking for SCOTCH... no checking for METIS... yes checking for ParMETIS... yes checking for TAO... no checking for M1QN3... yes checking for PROJ... no checking for SLEPc... no checking for shapelib... no checking for ScaLAPACK... yes checking for BLAS/LAPACK... yes checking for MKL... no checking for PlaLAPACK... no checking for MPLAPACK... no checking for MUMPS... yes checking for BLACS... no checking for HYPRE... no checking for Prometheus... no checking for SEMIC... yes checking for SPAI... no checking for SuperLU... no checking for SPOOLES... no checking for PaStiX... no checking for ml... no checking for UMFPACK... no checking for libm... done checking for MATH77... no checking for Fortran compilation... yes checking for Fortran library... done checking for Xlib (graphics library)... done checking for MeteoIO... no checking for SNOWPACK... no checking for NeoPZ... no checking for Gmsh... no checking for BAMG capability compilation... yes checking for ice/ocean coupling capability compilation... no checking for kml capability compilation... no checking for kriging capability compilation... no checking for HydrologyTws capability compilation... yes checking for AdjointBalancethickness2 capability compilation... yes checking for AdjointBalancethickness capability compilation... yes checking for AdjointHoriz capability compilation... yes checking for Age capability compilation... yes checking for Balancethickness2 capability compilation... yes checking for Balancethickness capability compilation... yes checking for BalancethicknessSoft capability compilation... yes checking for Balancevelocity capability compilation... yes checking for DamageEvolution capability compilation... yes checking for Debris capability compilation... yes checking for DepthAverage capability compilation... yes checking for Enthalpy capability compilation... yes checking for Esa capability compilation... yes checking for Extrapolation capability compilation... yes checking for ExtrudeFromBase capability compilation... yes checking for ExtrudeFromTop capability compilation... yes checking for FreeSurfaceBase capability compilation... yes checking for FreeSurfaceTop capability compilation... yes checking for GLheightadvection capability compilation... yes checking for HydrologyDCEfficient capability compilation... yes checking for HydrologyDCInefficient capability compilation... yes checking for HydrologyGlaDS capability compilation... yes checking for HydrologyPism capability compilation... yes checking for HydrologyShakti capability compilation... yes checking for HydrologyShreve capability compilation... yes checking for HydrologyArmapw capability compilation... yes checking for L2ProjectionBase capability compilation... yes checking for L2ProjectionEPL capability compilation... yes checking for Levelset capability compilation... yes checking for Love capability compilation... no checking for Masstransport capability compilation... yes checking for Melting capability compilation... yes checking for Oceantransport capability compilation... yes checking for Recovery capability compilation... yes checking for Sampling capability compilation... yes checking for Sealevelchange capability compilation... no checking for Smb capability compilation... yes checking for Smooth capability compilation... yes checking for Stressbalance capability compilation... yes checking for StressbalanceSIA capability compilation... yes checking for StressbalanceVertical capability compilation... yes checking for Thermal capability compilation... yes checking for UzawaPressure capability compilation... yes checking for iOS compilation... no checking for Android capability compilation... no checking with Android Native Development Kit (NDK)... no checking for C++ optimization flags... -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ checking for number of threads... 4 checking for 64-bit indices... 0 checking consistency between all external packages... done checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/c/Makefile config.status: creating src/wrappers/Makefile config.status: creating src/wrappers/python/Makefile config.status: creating src/wrappers/matlab/Makefile config.status: creating src/wrappers/javascript/Makefile config.status: creating src/m/Makefile config.status: creating ./config.h config.status: executing depfiles commands config.status: executing libtool commands ====================================================== Compiling ISSM ====================================================== Making with 8 CPUs make all-recursive make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' Making all in src make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' Making all in c make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' CXX classes/libISSMCore_la-DependentObject.lo CXX classes/libISSMCore_la-Contours.lo CXX classes/libISSMCore_la-Vertices.lo CXX classes/libISSMCore_la-Nodes.lo CXX classes/libISSMCore_la-Numberedcostfunction.lo CXX classes/libISSMCore_la-Misfit.lo CXX classes/libISSMCore_la-Cfsurfacesquare.lo CXX classes/libISSMCore_la-Cfsurfacesquaretransient.lo CXX classes/libISSMCore_la-Cfdragcoeffabsgrad.lo CXX classes/libISSMCore_la-Cfdragcoeffabsgradtransient.lo CXX classes/libISSMCore_la-Cfrheologybbarabsgrad.lo CXX classes/libISSMCore_la-Cfrheologybbarabsgradtransient.lo CXX classes/libISSMCore_la-Cfsurfacelogvel.lo CXX classes/libISSMCore_la-Cflevelsetmisfit.lo CXX classes/libISSMCore_la-Regionaloutput.lo CXX classes/libISSMCore_la-Nodalvalue.lo CXX classes/libISSMCore_la-Node.lo CXX classes/libISSMCore_la-Vertex.lo CXX classes/libISSMCore_la-Hook.lo CXX classes/libISSMCore_la-Radar.lo CXX classes/libISSMCore_la-BarystaticContributions.lo CXX classes/Constraints/libISSMCore_la-Constraints.lo CXX classes/Constraints/libISSMCore_la-SpcStatic.lo CXX classes/Constraints/libISSMCore_la-SpcDynamic.lo CXX classes/Loads/libISSMCore_la-Channel.lo CXX classes/Loads/libISSMCore_la-Loads.lo CXX classes/Loads/libISSMCore_la-Penpair.lo CXX classes/Loads/libISSMCore_la-Pengrid.lo CXX classes/Loads/libISSMCore_la-Moulin.lo CXX classes/Loads/libISSMCore_la-Numericalflux.lo CXX classes/Loads/libISSMCore_la-Neumannflux.lo CXX classes/libISSMCore_la-Profiler.lo CXX shared/Numerics/libISSMCore_la-Verbosity.lo CXX shared/Numerics/libISSMCore_la-GaussPoints.lo CXX shared/Numerics/libISSMCore_la-cross.lo CXX shared/Numerics/libISSMCore_la-cubic.lo CXX shared/Numerics/libISSMCore_la-NewtonSolveDnorm.lo CXX shared/Numerics/libISSMCore_la-ODE1.lo CXX shared/Numerics/libISSMCore_la-extrema.lo CXX shared/Numerics/libISSMCore_la-legendre.lo CXX shared/Numerics/libISSMCore_la-XZvectorsToCoordinateSystem.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateFaces.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateEdges.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateSingleNodeToElementConnectivity.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateNumberNodeToElementConnectivity.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateElementsVerticesAndMaterials.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateNodes.lo CXX main/libISSMCore_la-EnvironmentInit.lo CXX main/libISSMCore_la-EnvironmentFinalize.lo CXX classes/libISSMCore_la-RiftStruct.lo CXX cores/libISSMCore_la-transient_core.lo CXX cores/libISSMCore_la-steadystate_core.lo CXX cores/libISSMCore_la-masstransport_core.lo CXX cores/libISSMCore_la-oceantransport_core.lo CXX cores/libISSMCore_la-depthaverage_core.lo CXX cores/libISSMCore_la-extrudefrombase_core.lo CXX cores/libISSMCore_la-extrudefromtop_core.lo CXX cores/libISSMCore_la-thermal_core.lo CXX cores/libISSMCore_la-smb_core.lo CXX cores/libISSMCore_la-bmb_core.lo CXX cores/libISSMCore_la-debris_core.lo CXX solutionsequences/libISSMCore_la-solutionsequence_thermal_nonlinear.lo CXX shared/Numerics/libISSMCore_la-BrentSearch.lo CXX cores/libISSMCore_la-control_core.lo CXX cores/libISSMCore_la-controltao_core.lo CXX cores/libISSMCore_la-controlm1qn3_core.lo CXX cores/libISSMCore_la-controladm1qn3_core.lo CXX cores/libISSMCore_la-controlvalidation_core.lo CXX cores/libISSMCore_la-adjointstressbalance_core.lo CXX cores/libISSMCore_la-adjointbalancethickness_core.lo CXX cores/libISSMCore_la-adjointbalancethickness2_core.lo CXX cores/libISSMCore_la-AdjointCorePointerFromSolutionEnum.lo CXX solutionsequences/libISSMCore_la-solutionsequence_adjoint_linear.lo CXX cores/libISSMCore_la-hydrology_core.lo CXX solutionsequences/libISSMCore_la-solutionsequence_hydro_nonlinear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_shakti_nonlinear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_glads_nonlinear.lo CXX cores/libISSMCore_la-stressbalance_core.lo CXX solutionsequences/libISSMCore_la-solutionsequence_stokescoupling_nonlinear.lo CXX cores/libISSMCore_la-balancethickness_core.lo CXX cores/libISSMCore_la-balancethickness2_core.lo CXX cores/libISSMCore_la-balancevelocity_core.lo CXX cores/libISSMCore_la-dummy_core.lo CXX cores/libISSMCore_la-surfaceslope_core.lo CXX cores/libISSMCore_la-bedslope_core.lo CXX cores/libISSMCore_la-damage_core.lo CXX cores/libISSMCore_la-levelsetfunctionslope_core.lo CXX cores/libISSMCore_la-movingfront_core.lo CXX cores/libISSMCore_la-groundingline_core.lo CXX classes/Loads/libISSMCore_la-Riftfront.lo CXX modules/ConstraintsStatex/libISSMCore_la-RiftConstraintsState.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateOutputDefinitions.lo CXX analyses/libISSMCore_la-AdjointBalancethicknessAnalysis.lo CXX analyses/libISSMCore_la-AdjointBalancethickness2Analysis.lo CXX analyses/libISSMCore_la-AdjointHorizAnalysis.lo CXX analyses/libISSMCore_la-AgeAnalysis.lo CXX analyses/libISSMCore_la-BalancethicknessAnalysis.lo CXX analyses/libISSMCore_la-Balancethickness2Analysis.lo CXX analyses/libISSMCore_la-BalancethicknessSoftAnalysis.lo CXX analyses/libISSMCore_la-BalancevelocityAnalysis.lo CXX analyses/libISSMCore_la-L2ProjectionBaseAnalysis.lo CXX analyses/libISSMCore_la-DamageEvolutionAnalysis.lo CXX analyses/libISSMCore_la-DebrisAnalysis.lo CXX analyses/libISSMCore_la-StressbalanceAnalysis.lo CXX analyses/libISSMCore_la-UzawaPressureAnalysis.lo CXX analyses/libISSMCore_la-StressbalanceSIAAnalysis.lo CXX analyses/libISSMCore_la-StressbalanceVerticalAnalysis.lo CXX analyses/libISSMCore_la-EnthalpyAnalysis.lo CXX analyses/libISSMCore_la-GLheightadvectionAnalysis.lo CXX analyses/libISSMCore_la-HydrologyShreveAnalysis.lo CXX analyses/libISSMCore_la-HydrologyTwsAnalysis.lo CXX analyses/libISSMCore_la-HydrologyShaktiAnalysis.lo CXX analyses/libISSMCore_la-HydrologyPismAnalysis.lo CXX analyses/libISSMCore_la-HydrologyGlaDSAnalysis.lo CXX analyses/libISSMCore_la-HydrologyDCInefficientAnalysis.lo CXX analyses/libISSMCore_la-HydrologyDCEfficientAnalysis.lo CXX analyses/libISSMCore_la-HydrologyArmapwAnalysis.lo CXX analyses/libISSMCore_la-L2ProjectionEPLAnalysis.lo CXX analyses/libISSMCore_la-MeltingAnalysis.lo CXX analyses/libISSMCore_la-MasstransportAnalysis.lo CXX analyses/libISSMCore_la-OceantransportAnalysis.lo CXX analyses/libISSMCore_la-SmbAnalysis.lo CXX analyses/libISSMCore_la-FreeSurfaceBaseAnalysis.lo CXX analyses/libISSMCore_la-FreeSurfaceTopAnalysis.lo CXX analyses/libISSMCore_la-ExtrudeFromBaseAnalysis.lo CXX analyses/libISSMCore_la-ExtrudeFromTopAnalysis.lo CXX analyses/libISSMCore_la-DepthAverageAnalysis.lo CXX analyses/libISSMCore_la-ThermalAnalysis.lo CXX analyses/libISSMCore_la-SmoothAnalysis.lo CXX analyses/libISSMCore_la-LevelsetAnalysis.lo CXX analyses/libISSMCore_la-ExtrapolationAnalysis.lo CXX cores/libISSMCore_la-esa_core.lo CXX analyses/libISSMCore_la-EsaAnalysis.lo CXX cores/libISSMCore_la-sampling_core.lo CXX analyses/libISSMCore_la-SamplingAnalysis.lo FC modules/SurfaceMassBalancex/run_semic.lo FC modules/SurfaceMassBalancex/run_semic_transient.lo CXX shared/String/ApiPrintf.lo CXX main/issm_slc-issm_slc.o CXX main/issm-issm.o CXX bamg/libISSMCore_la-BamgGeom.lo CXX bamg/libISSMCore_la-BamgMesh.lo CXX bamg/libISSMCore_la-BamgOpts.lo CXX bamg/libISSMCore_la-CrackedEdge.lo CXX bamg/libISSMCore_la-Curve.lo CXX bamg/libISSMCore_la-Edge.lo CXX bamg/libISSMCore_la-GeomEdge.lo CXX bamg/libISSMCore_la-GeomSubDomain.lo CXX bamg/libISSMCore_la-GeomVertex.lo CXX bamg/libISSMCore_la-Geometry.lo CXX bamg/libISSMCore_la-ListofIntersectionTriangles.lo CXX bamg/libISSMCore_la-EigenMetric.lo CXX bamg/libISSMCore_la-Metric.lo CXX bamg/libISSMCore_la-BamgQuadtree.lo CXX bamg/libISSMCore_la-SetOfE4.lo CXX bamg/libISSMCore_la-SubDomain.lo CXX bamg/libISSMCore_la-AdjacentTriangle.lo CXX bamg/libISSMCore_la-Triangle.lo CXX bamg/libISSMCore_la-BamgVertex.lo CXX bamg/libISSMCore_la-VertexOnEdge.lo CXX bamg/libISSMCore_la-VertexOnGeom.lo CXX bamg/libISSMCore_la-VertexOnVertex.lo CXX bamg/libISSMCore_la-Mesh.lo CXX shared/Bamg/libISSMCore_la-BigPrimeNumber.lo CXX modules/Bamgx/libISSMCore_la-Bamgx.lo CXX modules/BamgConvertMeshx/libISSMCore_la-BamgConvertMeshx.lo CXX modules/BamgTriangulatex/libISSMCore_la-BamgTriangulatex.lo CXX shared/Numerics/libISSMCore_la-isnan.lo CXX datastructures/libISSMCore_la-DataSet.lo CXX classes/gauss/libISSMCore_la-GaussSeg.lo CXX classes/gauss/libISSMCore_la-GaussTria.lo CXX classes/gauss/libISSMCore_la-GaussTetra.lo CXX classes/gauss/libISSMCore_la-GaussPenta.lo CXX classes/libISSMCore_la-IoModel.lo CXX classes/libISSMCore_la-FemModel.lo CXX classes/Loads/libISSMCore_la-Friction.lo CXX classes/Constraints/libISSMCore_la-SpcTransient.lo CXX classes/ExternalResults/libISSMCore_la-Results.lo CXX classes/Elements/libISSMCore_la-Element.lo CXX classes/Elements/libISSMCore_la-Elements.lo CXX classes/Elements/libISSMCore_la-ElementHook.lo CXX classes/Elements/libISSMCore_la-Seg.lo CXX classes/Elements/libISSMCore_la-SegRef.lo CXX classes/Elements/libISSMCore_la-Tria.lo CXX classes/Elements/libISSMCore_la-TriaRef.lo CXX classes/Elements/libISSMCore_la-Tetra.lo CXX classes/Elements/libISSMCore_la-TetraRef.lo CXX classes/Elements/libISSMCore_la-Penta.lo CXX classes/Elements/libISSMCore_la-PentaRef.lo CXX classes/Materials/libISSMCore_la-Materials.lo CXX classes/Materials/libISSMCore_la-Matice.lo CXX classes/Materials/libISSMCore_la-Matlitho.lo CXX classes/Materials/libISSMCore_la-Matestar.lo CXX classes/matrix/libISSMCore_la-ElementMatrix.lo CXX classes/matrix/libISSMCore_la-ElementVector.lo CXX classes/Params/libISSMCore_la-Parameters.lo CXX classes/Params/libISSMCore_la-BoolParam.lo CXX classes/Params/libISSMCore_la-ControlParam.lo CXX classes/Params/libISSMCore_la-IntParam.lo CXX classes/Params/libISSMCore_la-IntVecParam.lo CXX classes/Params/libISSMCore_la-IntMatParam.lo CXX classes/Params/libISSMCore_la-DoubleParam.lo CXX classes/Params/libISSMCore_la-FileParam.lo CXX classes/Params/libISSMCore_la-StringArrayParam.lo CXX classes/Params/libISSMCore_la-DoubleMatParam.lo CXX classes/Params/libISSMCore_la-DoubleTransientMatParam.lo CXX classes/Params/libISSMCore_la-DoubleMatArrayParam.lo CXX classes/Params/libISSMCore_la-DoubleVecParam.lo CXX classes/Params/libISSMCore_la-StringParam.lo CXX classes/Params/libISSMCore_la-MatrixParam.lo CXX classes/Params/libISSMCore_la-VectorParam.lo CXX classes/Params/libISSMCore_la-TransientParam.lo CXX classes/Params/libISSMCore_la-TransientArrayParam.lo CXX classes/Params/libISSMCore_la-DataSetParam.lo CXX shared/Matrix/libISSMCore_la-MatrixUtils.lo CXX shared/io/Disk/libISSMCore_la-pfopen.lo CXX shared/io/Disk/libISSMCore_la-pfclose.lo CXX shared/io/Disk/libISSMCore_la-WriteLockFile.lo CXX shared/io/Print/libISSMCore_la-PrintfFunction.lo CXX shared/io/Comm/libISSMCore_la-IssmComm.lo CXX shared/io/Marshalling/libISSMCore_la-IoCodeConversions.lo CXX shared/io/Marshalling/libISSMCore_la-Marshalling.lo CXX shared/LatLong/libISSMCore_la-Ll2xyx.lo CXX shared/LatLong/libISSMCore_la-Xy2llx.lo CXX shared/FSanalyticals/libISSMCore_la-fsanalyticals.lo CXX shared/Enum/libISSMCore_la-EnumToStringx.lo CXX shared/Enum/libISSMCore_la-StringToEnumx.lo CXX shared/Exceptions/libISSMCore_la-Exceptions.lo CXX shared/Sorting/libISSMCore_la-binary_search.lo CXX shared/Elements/libISSMCore_la-Cuffey.lo CXX shared/Elements/libISSMCore_la-BuddJacka.lo CXX shared/Elements/libISSMCore_la-CuffeyTemperate.lo CXX shared/Elements/libISSMCore_la-StressIntensityIntegralWeight.lo CXX shared/Elements/libISSMCore_la-Paterson.lo CXX shared/Elements/libISSMCore_la-Arrhenius.lo CXX shared/Elements/libISSMCore_la-NyeCO2.lo CXX shared/Elements/libISSMCore_la-NyeH2O.lo CXX shared/Elements/libISSMCore_la-LliboutryDuval.lo CXX shared/Elements/libISSMCore_la-PrintArrays.lo CXX shared/Elements/libISSMCore_la-PddSurfaceMassBalance.lo CXX shared/Elements/libISSMCore_la-PddSurfaceMassBalanceSicopolis.lo CXX shared/Elements/libISSMCore_la-ComputeDelta18oTemperaturePrecipitation.lo CXX shared/Elements/libISSMCore_la-ComputeMungsmTemperaturePrecipitation.lo CXX shared/Elements/libISSMCore_la-ComputeD18OTemperaturePrecipitationFromPD.lo CXX shared/Elements/libISSMCore_la-DrainageFunctionWaterfraction.lo CXX shared/Elements/libISSMCore_la-EstarComponents.lo CXX shared/Random/libISSMCore_la-random.lo CXX shared/Random/libISSMCore_la-randomgenerator.lo CXX shared/String/libISSMCore_la-DescriptorIndex.lo CXX toolkits/issm/libISSMCore_la-IssmToolkitUtils.lo CXX toolkits/issm/libISSMCore_la-IssmSolver.lo CXX toolkits/mpi/libISSMCore_la-issmmpi.lo CXX toolkits/mpi/commops/libISSMCore_la-DetermineLocalSize.lo CXX toolkits/mpi/commops/libISSMCore_la-DetermineGlobalSize.lo CXX toolkits/mpi/commops/libISSMCore_la-DetermineRowRankFromLocalSize.lo CXX toolkits/mpi/commops/libISSMCore_la-GetOwnershipBoundariesFromRange.lo CXX toolkits/libISSMCore_la-ToolkitOptions.lo CXX modules/MmeToInputFromIdx/libISSMCore_la-MmeToInputFromIdx.lo CXX modules/ModelProcessorx/libISSMCore_la-ModelProcessorx.lo CXX modules/ModelProcessorx/libISSMCore_la-ElementsAndVerticesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-NodesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-EdgesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-FacesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateParameters.lo CXX modules/ModelProcessorx/Autodiff/libISSMCore_la-CreateParametersAutodiff.lo CXX modules/ParseToolkitsOptionsx/libISSMCore_la-ParseToolkitsOptionsx.lo CXX modules/NodesDofx/libISSMCore_la-NodesDofx.lo CXX modules/NodalValuex/libISSMCore_la-NodalValuex.lo CXX modules/VertexCoordinatesx/libISSMCore_la-VertexCoordinatesx.lo CXX modules/ElementCoordinatesx/libISSMCore_la-ElementCoordinatesx.lo CXX modules/OutputResultsx/libISSMCore_la-OutputResultsx.lo CXX modules/InputDepthAverageAtBasex/libISSMCore_la-InputDepthAverageAtBasex.lo CXX modules/InputDuplicatex/libISSMCore_la-InputDuplicatex.lo CXX modules/InputExtrudex/libISSMCore_la-InputExtrudex.lo CXX modules/SurfaceAreax/libISSMCore_la-SurfaceAreax.lo CXX modules/AllocateSystemMatricesx/libISSMCore_la-AllocateSystemMatricesx.lo CXX modules/CreateJacobianMatrixx/libISSMCore_la-CreateJacobianMatrixx.lo CXX modules/SystemMatricesx/libISSMCore_la-SystemMatricesx.lo CXX modules/CreateNodalConstraintsx/libISSMCore_la-CreateNodalConstraintsx.lo CXX modules/UpdateDynamicConstraintsx/libISSMCore_la-UpdateDynamicConstraintsx.lo CXX modules/IoModelToConstraintsx/libISSMCore_la-IoModelToConstraintsx.lo CXX modules/SetActiveNodesLSMx/libISSMCore_la-SetActiveNodesLSMx.lo CXX modules/InputUpdateFromConstantx/libISSMCore_la-InputUpdateFromConstantx.lo CXX modules/InputUpdateFromSolutionx/libISSMCore_la-InputUpdateFromSolutionx.lo CXX modules/GeothermalFluxx/libISSMCore_la-GeothermalFluxx.lo CXX modules/GetSolutionFromInputsx/libISSMCore_la-GetSolutionFromInputsx.lo CXX modules/GetVectorFromInputsx/libISSMCore_la-GetVectorFromInputsx.lo CXX modules/InputUpdateFromVectorx/libISSMCore_la-InputUpdateFromVectorx.lo CXX modules/FloatingiceMeltingRatex/libISSMCore_la-FloatingiceMeltingRatex.lo CXX modules/FloatingiceMeltingRatePicox/libISSMCore_la-FloatingiceMeltingRatePicox.lo CXX modules/FrontalForcingsx/libISSMCore_la-FrontalForcingsx.lo CXX modules/ConfigureObjectsx/libISSMCore_la-ConfigureObjectsx.lo CXX modules/SpcNodesx/libISSMCore_la-SpcNodesx.lo CXX modules/SurfaceMassBalancex/libISSMCore_la-SurfaceMassBalancex.lo CXX modules/SurfaceMassBalancex/libISSMCore_la-Gembx.lo CXX modules/Reducevectorgtofx/libISSMCore_la-Reducevectorgtofx.lo CXX modules/Reduceloadx/libISSMCore_la-Reduceloadx.lo CXX modules/ConstraintsStatex/libISSMCore_la-ConstraintsStatex.lo CXX modules/ResetConstraintsx/libISSMCore_la-ResetConstraintsx.lo CXX modules/ResetFSBasalBoundaryConditionx/libISSMCore_la-ResetFSBasalBoundaryConditionx.lo CXX modules/Solverx/libISSMCore_la-Solverx.lo CXX modules/StochasticForcingx/libISSMCore_la-StochasticForcingx.lo CXX modules/Mergesolutionfromftogx/libISSMCore_la-Mergesolutionfromftogx.lo CXX cores/libISSMCore_la-ProcessArguments.lo CXX cores/libISSMCore_la-ResetBoundaryConditions.lo CXX cores/libISSMCore_la-WrapperCorePointerFromSolutionEnum.lo CXX cores/libISSMCore_la-WrapperPreCorePointerFromSolutionEnum.lo CXX cores/libISSMCore_la-CorePointerFromSolutionEnum.lo CXX cores/libISSMCore_la-ad_core.lo CXX cores/libISSMCore_la-adgradient_core.lo CXX analyses/libISSMCore_la-EnumToAnalysis.lo CXX solutionsequences/libISSMCore_la-solutionsequence_la.lo CXX solutionsequences/libISSMCore_la-solutionsequence_la_theta.lo CXX solutionsequences/libISSMCore_la-solutionsequence_linear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_nonlinear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_newton.lo CXX solutionsequences/libISSMCore_la-solutionsequence_fct.lo CXX solutionsequences/libISSMCore_la-solutionsequence_schurcg.lo CXX solutionsequences/libISSMCore_la-solutionsequence_sampling.lo CXX solutionsequences/libISSMCore_la-convergence.lo CXX classes/Options/libISSMCore_la-Options.lo CXX classes/Options/libISSMCore_la-OptionUtilities.lo CXX modules/ModelProcessorx/Transient/libISSMCore_la-UpdateElementsTransient.lo CXX modules/ModelProcessorx/Transient/libISSMCore_la-UpdateParametersTransient.lo CXX modules/ControlInputSetGradientx/libISSMCore_la-ControlInputSetGradientx.lo CXX modules/GetVectorFromControlInputsx/libISSMCore_la-GetVectorFromControlInputsx.lo CXX modules/SetControlInputsFromVectorx/libISSMCore_la-SetControlInputsFromVectorx.lo CXX modules/ModelProcessorx/Control/libISSMCore_la-CreateParametersControl.lo CXX modules/ModelProcessorx/Control/libISSMCore_la-UpdateElementsAndMaterialsControl.lo CXX modules/SurfaceAbsVelMisfitx/libISSMCore_la-SurfaceAbsVelMisfitx.lo CXX modules/SurfaceRelVelMisfitx/libISSMCore_la-SurfaceRelVelMisfitx.lo CXX modules/SurfaceLogVelMisfitx/libISSMCore_la-SurfaceLogVelMisfitx.lo CXX modules/SurfaceLogVxVyMisfitx/libISSMCore_la-SurfaceLogVxVyMisfitx.lo CXX modules/SurfaceAverageVelMisfitx/libISSMCore_la-SurfaceAverageVelMisfitx.lo CXX modules/ThicknessAbsMisfitx/libISSMCore_la-ThicknessAbsMisfitx.lo CXX modules/Gradjx/libISSMCore_la-Gradjx.lo CXX modules/DragCoefficientAbsGradientx/libISSMCore_la-DragCoefficientAbsGradientx.lo CXX modules/ThicknessAlongGradientx/libISSMCore_la-ThicknessAlongGradientx.lo CXX modules/ThicknessAcrossGradientx/libISSMCore_la-ThicknessAcrossGradientx.lo CXX modules/RheologyBbarAbsGradientx/libISSMCore_la-RheologyBbarAbsGradientx.lo CXX modules/RheologyBAbsGradientx/libISSMCore_la-RheologyBAbsGradientx.lo CXX modules/GroundinglineMigrationx/libISSMCore_la-GroundinglineMigrationx.lo CXX modules/OutputDefinitionsResponsex/libISSMCore_la-OutputDefinitionsResponsex.lo CXX modules/InterpFromMeshToMesh2dx/libISSMCore_la-InterpFromMeshToMesh2dx.lo CXX classes/Inputs/libISSMCore_la-Inputs.lo CXX classes/Inputs/libISSMCore_la-BoolInput.lo CXX classes/Inputs/libISSMCore_la-DoubleInput.lo CXX classes/Inputs/libISSMCore_la-IntInput.lo CXX classes/Inputs/libISSMCore_la-ElementInput.lo CXX classes/Inputs/libISSMCore_la-SegInput.lo CXX classes/Inputs/libISSMCore_la-TriaInput.lo CXX classes/Inputs/libISSMCore_la-PentaInput.lo CXX classes/Inputs/libISSMCore_la-DatasetInput.lo CXX classes/Inputs/libISSMCore_la-ControlInput.lo CXX classes/Inputs/libISSMCore_la-TransientInput.lo CXX classes/Inputs/libISSMCore_la-ArrayInput.lo CXX classes/Inputs/libISSMCore_la-IntArrayInput.lo CXX toolkits/codipack/libISSMCore_la-ampi_interface.lo CXX toolkits/mumps/libISSMCore_la-MumpsSolve.lo CXX toolkits/gsl/libISSMCore_la-DenseGslSolve.lo CXX modules/Damagex/libISSMCore_la-Damagex.lo CXX modules/Calvingx/libISSMCore_la-Calvingx.lo CXX modules/KillIcebergsx/libISSMCore_la-KillIcebergsx.lo CXX toolkits/metis/patches/libISSMCore_la-METIS_PartMeshNodalPatch.lo CXXLD libISSMOverload.la ar: `u' modifier ignored since `D' is the default (see `U') CXX shared/Threads/libISSMModules_la-LaunchThread.lo CXX shared/Threads/libISSMModules_la-PartitionRange.lo CXX shared/Exp/libISSMModules_la-exp.lo CXX shared/Triangle/libISSMModules_la-AssociateSegmentToElement.lo CXX shared/Triangle/libISSMModules_la-GridInsideHole.lo CXX shared/Triangle/libISSMModules_la-OrderSegments.lo CXX shared/Triangle/libISSMModules_la-SplitMeshForRifts.lo CXX shared/Triangle/libISSMModules_la-TriangleUtils.lo CXX modules/Trianglex/libISSMModules_la-Trianglex.lo CXX modules/ProcessRiftsx/libISSMModules_la-ProcessRiftsx.lo CXX modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo CXX modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo CXX modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo CXX modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo CXX modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo CXX modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo CXX modules/InterpFromMeshToGridx/libISSMModules_la-InterpFromMeshToGridx.lo CXX modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo CXX modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo CXX modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo CXX modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo CXX modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo CXX modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo CXX modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo CXX modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo CXX modules/NodeConnectivityx/libISSMModules_la-NodeConnectivityx.lo CXX modules/ElementConnectivityx/libISSMModules_la-ElementConnectivityx.lo CXX modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo CXXLD libISSMCore.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD libISSMModules.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD issm.exe CXXLD issm_slc.exe make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' Making all in m make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' Making all in wrappers make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' Making all in matlab make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' CXX io/libISSMMatlab_la-CheckNumMatlabArguments.lo CXX io/libISSMMatlab_la-FetchMatlabData.lo CXX io/libISSMMatlab_la-WriteMatlabData.lo CXX ../BamgConvertMesh/BamgConvertMesh.lo CXX ../BamgMesher/BamgMesher.lo CXX ../BamgTriangulate/BamgTriangulate.lo CXX io/libISSMApi_la-ApiPrintf.lo CXX ../ContourToMesh/ContourToMesh.lo CXX ../ContourToNodes/ContourToNodes.lo CXX ../DistanceToMaskBoundary/DistanceToMaskBoundary.lo CXX ../ElementConnectivity/ElementConnectivity.lo CXX ../ExpSimplify/ExpSimplify.lo CXX ../ExpToLevelSet/ExpToLevelSet.lo CXX ../InterpFromGridToMesh/InterpFromGridToMesh.lo CXX ../InterpFromMesh2d/InterpFromMesh2d.lo CXX ../InterpFromMeshToGrid/InterpFromMeshToGrid.lo CXX ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.lo CXX ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.lo CXX ../IssmConfig/IssmConfig.lo CXX ../M1qn3/M1qn3.lo CXX ../MeshPartition/MeshPartition.lo CXX ../MeshProfileIntersection/MeshProfileIntersection.lo CXX ../NodeConnectivity/NodeConnectivity.lo CXX ../PointCloudFindNeighbors/PointCloudFindNeighbors.lo CXX ../ProcessRifts/ProcessRifts.lo CXX ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.lo CXX ../Scotch/Scotch.lo CXX ../Triangle/Triangle.lo CXXLD libISSMMatlab.la CXXLD libISSMApi.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD BamgConvertMesh_matlab.la CXXLD BamgMesher_matlab.la CXXLD BamgTriangulate_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ContourToMesh_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ContourToNodes_matlab.la CXXLD DistanceToMaskBoundary_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ElementConnectivity_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ExpSimplify_matlab.la CXXLD ExpToLevelSet_matlab.la CXXLD InterpFromGridToMesh_matlab.la CXXLD InterpFromMesh2d_matlab.la CXXLD InterpFromMeshToGrid_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD InterpFromMeshToMesh2d_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD InterpFromMeshToMesh3d_matlab.la CXXLD IssmConfig_matlab.la CXXLD M1qn3_matlab.la CXXLD MeshPartition_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD MeshProfileIntersection_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD NodeConnectivity_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD PointCloudFindNeighbors_matlab.la CXXLD ProcessRifts_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD PropagateFlagsFromConnectivity_matlab.la CXXLD Scotch_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD Triangle_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' Making install in src make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' Making install in c make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' CXXLD issm.exe CXXLD issm_slc.exe make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' CXXLD issm.exe CXXLD issm_slc.exe /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libISSMCore.la libISSMOverload.la libISSMModules.la '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' libtool: install: /usr/bin/install -c .libs/libISSMCore.so /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.so libtool: install: /usr/bin/install -c .libs/libISSMCore.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.la libtool: install: /usr/bin/install -c .libs/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.so libtool: install: /usr/bin/install -c .libs/libISSMOverload.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.la libtool: warning: relinking 'libISSMModules.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/c; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -g -O2 -std=c++11 -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -avoid-version -o libISSMModules.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ./shared/Threads/libISSMModules_la-LaunchThread.lo ./shared/Threads/libISSMModules_la-PartitionRange.lo ./shared/Exp/libISSMModules_la-exp.lo ./shared/Triangle/libISSMModules_la-AssociateSegmentToElement.lo ./shared/Triangle/libISSMModules_la-GridInsideHole.lo ./shared/Triangle/libISSMModules_la-OrderSegments.lo ./shared/Triangle/libISSMModules_la-SplitMeshForRifts.lo ./shared/Triangle/libISSMModules_la-TriangleUtils.lo ./modules/Trianglex/libISSMModules_la-Trianglex.lo ./modules/ProcessRiftsx/libISSMModules_la-ProcessRiftsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo ./modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo ./modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo ./modules/InterpFromMeshToGridx/libISSMModules_la-InterpFromMeshToGridx.lo ./modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo ./modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo ./modules/NodeConnectivityx/libISSMModules_la-NodeConnectivityx.lo ./modules/ElementConnectivityx/libISSMModules_la-ElementConnectivityx.lo ./modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo ./libISSMCore.la -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/triangle/install/lib -ltriangle -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lflapack -lfblas ) libtool: install: /usr/bin/install -c .libs/libISSMModules.soT /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.so libtool: install: /usr/bin/install -c .libs/libISSMModules.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.la libtool: install: /usr/bin/install -c .libs/libISSMCore.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.a libtool: install: /usr/bin/install -c .libs/libISSMOverload.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.a libtool: install: /usr/bin/install -c .libs/libISSMModules.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.a libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-CoDiPack/scripts:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/dyson/:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ---------------------------------------------------------------------- Libraries have been installed in: /home/jenkins/workspace/Debian_Linux-CoDiPack/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c issm.exe issm_slc.exe '/home/jenkins/workspace/Debian_Linux-CoDiPack/bin' libtool: install: /usr/bin/install -c .libs/issm.exe /home/jenkins/workspace/Debian_Linux-CoDiPack/bin/issm.exe libtool: install: /usr/bin/install -c .libs/issm_slc.exe /home/jenkins/workspace/Debian_Linux-CoDiPack/bin/issm_slc.exe make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' Making install in m make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' Making install in wrappers make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' Making install in matlab make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' /bin/bash ../../../libtool --mode=install /usr/bin/install -c libISSMMatlab.la libISSMApi.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la M1qn3_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' libtool: warning: relinking 'libISSMMatlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -avoid-version -o libISSMMatlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ./io/libISSMMatlab_la-CheckNumMatlabArguments.lo ./io/libISSMMatlab_la-FetchMatlabData.lo ./io/libISSMMatlab_la-WriteMatlabData.lo ./../../c/libISSMCore.la ./../../c/libISSMModules.la -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -ldmumps -lmumps_common -lpord -lparmetis -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lscalapack -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lflapack -lfblas -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lparmetis -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lmetis -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/gsl/install/lib -lgsl -lgslcblas -lm -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/libISSMMatlab.soT /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.so libtool: install: /usr/bin/install -c .libs/libISSMMatlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.la libtool: install: /usr/bin/install -c .libs/libISSMApi.so /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi.so libtool: install: /usr/bin/install -c .libs/libISSMApi.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi.la libtool: warning: relinking 'BamgConvertMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgConvertMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../BamgConvertMesh/BamgConvertMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.la libtool: warning: relinking 'BamgMesher_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgMesher_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../BamgMesher/BamgMesher.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.la libtool: warning: relinking 'BamgTriangulate_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgTriangulate_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../BamgTriangulate/BamgTriangulate.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.la libtool: warning: relinking 'ContourToMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ContourToMesh/ContourToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.la libtool: warning: relinking 'ContourToNodes_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToNodes_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ContourToNodes/ContourToNodes.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.la libtool: warning: relinking 'DistanceToMaskBoundary_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o DistanceToMaskBoundary_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../DistanceToMaskBoundary/DistanceToMaskBoundary.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.la libtool: warning: relinking 'ElementConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ElementConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ElementConnectivity/ElementConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.la libtool: warning: relinking 'ExpSimplify_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpSimplify_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ExpSimplify/ExpSimplify.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.la libtool: warning: relinking 'ExpToLevelSet_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpToLevelSet_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ExpToLevelSet/ExpToLevelSet.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.la libtool: warning: relinking 'InterpFromGridToMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromGridToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromGridToMesh/InterpFromGridToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.la libtool: warning: relinking 'InterpFromMesh2d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMesh2d/InterpFromMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.la libtool: warning: relinking 'InterpFromMeshToGrid_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToGrid_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMeshToGrid/InterpFromMeshToGrid.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.la libtool: warning: relinking 'InterpFromMeshToMesh2d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.la libtool: warning: relinking 'InterpFromMeshToMesh3d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh3d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.la libtool: warning: relinking 'IssmConfig_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o IssmConfig_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../IssmConfig/IssmConfig.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.la libtool: warning: relinking 'M1qn3_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o M1qn3_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../M1qn3/M1qn3.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/M1qn3_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/M1qn3_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/M1qn3_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/M1qn3_matlab.la libtool: warning: relinking 'MeshPartition_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshPartition_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../MeshPartition/MeshPartition.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.la libtool: warning: relinking 'MeshProfileIntersection_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshProfileIntersection_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../MeshProfileIntersection/MeshProfileIntersection.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.la libtool: warning: relinking 'NodeConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o NodeConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../NodeConnectivity/NodeConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.la libtool: warning: relinking 'PointCloudFindNeighbors_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PointCloudFindNeighbors_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../PointCloudFindNeighbors/PointCloudFindNeighbors.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.la libtool: warning: relinking 'ProcessRifts_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ProcessRifts_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ProcessRifts/ProcessRifts.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.la libtool: warning: relinking 'PropagateFlagsFromConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PropagateFlagsFromConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.la libtool: warning: relinking 'Scotch_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Scotch_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../Scotch/Scotch.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/Scotch_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Scotch_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/Scotch_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Scotch_matlab.la libtool: warning: relinking 'Triangle_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -fPIC -std=c++11 -D_DO_NOT_LOAD_GLOBALS_ -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Triangle_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../Triangle/Triangle.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/triangle/install/lib -ltriangle ) libtool: install: /usr/bin/install -c .libs/Triangle_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/Triangle_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.la libtool: install: /usr/bin/install -c .libs/libISSMMatlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.a libtool: install: /usr/bin/install -c .libs/libISSMApi.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi.a libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.a libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.a libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.a libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.a libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.a libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.a libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.a libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.a libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.a libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.a libtool: install: /usr/bin/install -c .libs/M1qn3_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/M1qn3_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/M1qn3_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/M1qn3_matlab.a libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.a libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.a libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.a libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.a libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.a libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.a libtool: install: /usr/bin/install -c .libs/Scotch_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Scotch_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Scotch_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Scotch_matlab.a libtool: install: /usr/bin/install -c .libs/Triangle_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.a libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-CoDiPack/scripts:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/dyson/:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ---------------------------------------------------------------------- Libraries have been installed in: /home/jenkins/workspace/Debian_Linux-CoDiPack/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' +++ Removing old junit reports from: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog/results +++ Running case: MATLAB-3015 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero boundary conditions for stressbalance model: spc set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "MasstransportSolution". Error in test3015 (line 57) V0=md.results.MasstransportSolution.IceVolume; Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3015 test name: SquareShelfConstrainedMasstransp2dAdolcForwardDifference field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3015 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero boundary conditions for stressbalance model: spc set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "MasstransportSolution". Error in test3015 (line 57) V0=md.results.MasstransportSolution.IceVolume; Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3015 test name: SquareShelfConstrainedMasstransp2dAdolcForwardDifference field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3119 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3119 (line 21) jac_reverse=md.results.TransientSolution(1).AutodiffJacobian; Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3119 test name: ReverseScalarDriver field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3119 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3119 (line 21) jac_reverse=md.results.TransientSolution(1).AutodiffJacobian; Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3119 test name: ReverseScalarDriver field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3201 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3201 (line 35) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3201 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3201 (line 35) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3202 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3202 (line 35) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3202 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3202 (line 35) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3203 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3203 (line 47) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3203 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3203 (line 47) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3204 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3204 (line 35) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3204 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3204 (line 35) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3205 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3205 (line 37) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3205 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3205 (line 37) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3206 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3206 (line 40) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3206 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3206 (line 40) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3480 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero INFO: the outlog will look better if only md.verbose.control is turned on uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3480 (line 63) (md.results.TransientSolution(1).Gradient1),... Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3480 test name: SquareShelfAdolcStaticControls field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3480 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero INFO: the outlog will look better if only md.verbose.control is turned on uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3480 (line 63) (md.results.TransientSolution(1).Gradient1),... Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3480 test name: SquareShelfAdolcStaticControls field: N/A +++ exit code: 0 +++ error: 1 ----------MATLAB exited in error!---------- < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 8 (23.2.0.2599560) 64-bit (glnxa64) April 29, 2024 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded ----------------starting:3015----------------------- boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero boundary conditions for stressbalance model: spc set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "MasstransportSolution". Error in test3015 (line 57) V0=md.results.MasstransportSolution.IceVolume; Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3015 test name: SquareShelfConstrainedMasstransp2dAdolcForwardDifference field: N/A ----------------finished:3015----------------------- ----------------starting:3119----------------------- boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3119 (line 21) jac_reverse=md.results.TransientSolution(1).AutodiffJacobian; Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3119 test name: ReverseScalarDriver field: N/A ----------------finished:3119----------------------- MATLABEXITEDCORRECTLY < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 8 (23.2.0.2599560) 64-bit (glnxa64) April 29, 2024 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded ----------------starting:3201----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3201 (line 35) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: N/A ----------------finished:3201----------------------- ----------------starting:3202----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3202 (line 35) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: N/A ----------------finished:3202----------------------- ----------------starting:3203----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3203 (line 47) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: N/A ----------------finished:3203----------------------- ----------------starting:3204----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3204 (line 35) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: N/A ----------------finished:3204----------------------- ----------------starting:3205----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3205 (line 37) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: N/A ----------------finished:3205----------------------- ----------------starting:3206----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3206 (line 40) for i=1:numel(md.results.TransientSolution) Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: N/A ----------------finished:3206----------------------- ----------------starting:3480----------------------- boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero INFO: the outlog will look better if only md.verbose.control is turned on uploading input file and queuing script launching solution sequence on remote cluster /bin/sh: 1: source: not found Unrecognized field name "TransientSolution". Error in test3480 (line 63) (md.results.TransientSolution(1).Gradient1),... Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 155) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3480 test name: SquareShelfAdolcStaticControls field: N/A ----------------finished:3480----------------------- MATLABEXITEDCORRECTLY -----------End of matlab_log.log----------- Build step 'Execute shell' marked build as failure Recording test results Publishing build last changes... Last changes from revision 48a9b97 (current) to a330354 (previous) published successfully! Finished: FAILURE