Started by GitHub push by TidbitSoftware Running as SYSTEM Building remotely on Debian_12-VM (debian linux) in workspace /home/jenkins/workspace/Debian_Linux-Python The recommended git tool is: NONE > git rev-parse --resolve-git-dir /home/jenkins/workspace/Debian_Linux-Python/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10 Fetching upstream changes from git@github.com:ISSMteam/ISSM.git > git --version # timeout=10 > git --version # 'git version 2.39.5' using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins Verifying host key using known hosts file > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/main^{commit} # timeout=10 Checking out Revision e6cde1126e38f765643e106f074b50d0baa2f9ec (refs/remotes/origin/main) > git config core.sparsecheckout # timeout=10 > git checkout -f e6cde1126e38f765643e106f074b50d0baa2f9ec # timeout=10 Commit message: "CHG: More reliable way of getting correct include path for Python on macOS that has both Xcode and Command Line Tools installed" > git rev-list --no-walk df8d14d7aab9b2058a3431d33c3d881c6e44c39f # timeout=10 [Debian_Linux-Python] $ /bin/bash /tmp/jenkins9974932919017337241.sh Cleaning up execution directory ====================================================== Determining installation type ====================================================== List of changed files --------------------- m4/issm_options.m4 -- checking for changed externalpackages... no -- checking for reconfiguration... yes -- checking for recompilation... yes ====================================================== Skipping autotools ====================================================== ====================================================== Skipping cmake ====================================================== ====================================================== Skipping petsc ====================================================== ====================================================== Skipping triangle ====================================================== ====================================================== Skipping m1qn3 ====================================================== ====================================================== Skipping semic ====================================================== ====================================================== Skipping shell2junit ====================================================== ====================================================== Cleaning up and reconfiguring ====================================================== CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /home/jenkins/workspace/Debian_Linux-Python/aux-config/missing aclocal-1.16 -I m4 cd . && /bin/bash /home/jenkins/workspace/Debian_Linux-Python/aux-config/missing automake-1.16 --foreign CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /home/jenkins/workspace/Debian_Linux-Python/aux-config/missing autoconf /bin/bash ./config.status --recheck running CONFIG_SHELL=/bin/bash /bin/bash ./configure --prefix=/home/jenkins/workspace/Debian_Linux-Python --disable-static --enable-development --enable-debugging --with-numthreads=4 --with-python=/home/jenkins/.venv/issm/bin/python --with-fortran-lib=-L/usr/lib/x86_64-linux-gnu -lgfortran --with-mpi-include=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install/include --with-mpi-libflags=-L/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort --with-blas-lapack-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-metis-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-parmetis-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-scalapack-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-mumps-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-petsc-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-triangle-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/triangle/install --with-m1qn3-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/m1qn3/install --with-semic-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/semic/install --no-create --no-recursion configure: ============================================================================ configure: = Ice-sheet and Sea-level System Model (ISSM) 4.24 configuration = configure: ============================================================================ checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking for mpicc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking whether mpicc understands -c and -o together... yes checking how to run the C preprocessor... mpicc -E checking for mpicxx... mpicxx checking whether we are using the GNU C++ compiler... yes checking whether mpicxx accepts -g... yes checking for mpifort... mpifort checking whether we are using the GNU Fortran 77 compiler... yes checking whether mpifort accepts -g... yes checking for mpifort... mpifort checking whether we are using the GNU Fortran compiler... yes checking whether mpifort accepts -g... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of mpicc... gcc3 checking dependency style of mpicxx... gcc3 checking whether make supports nested variables... (cached) yes checking for ar... ar checking the archiver (ar) interface... ar checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... yes checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... yes checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for mpifort option to produce PIC... -fPIC checking if mpifort PIC flag -fPIC works... yes checking if mpifort static flag -static works... yes checking if mpifort supports -c -o file.o... yes checking if mpifort supports -c -o file.o... (cached) yes checking whether the mpifort linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for mpifort option to produce PIC... -fPIC checking if mpifort PIC flag -fPIC works... yes checking if mpifort static flag -static works... yes checking if mpifort supports -c -o file.o... yes checking if mpifort supports -c -o file.o... (cached) yes checking whether the mpifort linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: ============================================================================ configure: = Checking ISSM specific options = configure: ============================================================================ checking for date... /usr/bin/date checking for build date... Thu Apr 3 20:08:15 PDT 2025 checking user name... jenkins checking host full OS name and version... linux checking host cpu... x86_64 checking vendor... pc checking host OS name... linux checking host OS version... 6.1.0-32-amd64 checking host OS architecture... x86_64 checking for debugging support... yes checking for development support... yes checking for standalone modules build... no checking for standalone executables build... no checking for standalone libraries build... no checking for wrappers compilation... yes checking operating system type... Linux checking for Xlib (graphics library)... done checking for MATLAB... no checking for JavaScript... no checking for triangle... yes checking for Boost... no checking for Dakota... no checking for Python... yes checking for Python version... 3.11 checking for Python include directory... File "<string>", line 1 from sysconfig import get_paths as gp; print(gp()'include') ^^^^^^^^^^^^^ SyntaxError: invalid syntax. Perhaps you forgot a comma? configure: error: Python.h not found! Please locate this file and contact ISSM developers via forum or email. make: *** [Makefile:481: config.status] Error 1 /bin/bash ./config.status --recheck running CONFIG_SHELL=/bin/bash /bin/bash ./configure --prefix=/home/jenkins/workspace/Debian_Linux-Python --disable-static --enable-development --enable-debugging --with-numthreads=4 --with-python=/home/jenkins/.venv/issm/bin/python --with-fortran-lib=-L/usr/lib/x86_64-linux-gnu -lgfortran --with-mpi-include=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install/include --with-mpi-libflags=-L/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort --with-blas-lapack-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-metis-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-parmetis-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-scalapack-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-mumps-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-petsc-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/petsc/install --with-triangle-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/triangle/install --with-m1qn3-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/m1qn3/install --with-semic-dir=/home/jenkins/workspace/Debian_Linux-Python/externalpackages/semic/install --no-create --no-recursion configure: ============================================================================ configure: = Ice-sheet and Sea-level System Model (ISSM) 4.24 configuration = configure: ============================================================================ checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking for mpicc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking whether mpicc understands -c and -o together... yes checking how to run the C preprocessor... mpicc -E checking for mpicxx... mpicxx checking whether we are using the GNU C++ compiler... yes checking whether mpicxx accepts -g... yes checking for mpifort... mpifort checking whether we are using the GNU Fortran 77 compiler... yes checking whether mpifort accepts -g... yes checking for mpifort... mpifort checking whether we are using the GNU Fortran compiler... yes checking whether mpifort accepts -g... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of mpicc... gcc3 checking dependency style of mpicxx... gcc3 checking whether make supports nested variables... (cached) yes checking for ar... ar checking the archiver (ar) interface... ar checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... yes checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... yes checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for mpifort option to produce PIC... -fPIC checking if mpifort PIC flag -fPIC works... yes checking if mpifort static flag -static works... yes checking if mpifort supports -c -o file.o... yes checking if mpifort supports -c -o file.o... (cached) yes checking whether the mpifort linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for mpifort option to produce PIC... -fPIC checking if mpifort PIC flag -fPIC works... yes checking if mpifort static flag -static works... yes checking if mpifort supports -c -o file.o... yes checking if mpifort supports -c -o file.o... (cached) yes checking whether the mpifort linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: ============================================================================ configure: = Checking ISSM specific options = configure: ============================================================================ checking for date... /usr/bin/date checking for build date... Thu Apr 3 20:08:22 PDT 2025 checking user name... jenkins checking host full OS name and version... linux checking host cpu... x86_64 checking vendor... pc checking host OS name... linux checking host OS version... 6.1.0-32-amd64 checking host OS architecture... x86_64 checking for debugging support... yes checking for development support... yes checking for standalone modules build... no checking for standalone executables build... no checking for standalone libraries build... no checking for wrappers compilation... yes checking operating system type... Linux checking for Xlib (graphics library)... done checking for MATLAB... no checking for JavaScript... no checking for triangle... yes checking for Boost... no checking for Dakota... no checking for Python... yes checking for Python version... 3.11 checking for Python include directory... File "<string>", line 1 from sysconfig import get_paths as gp; print(gp()'include') ^^^^^^^^^^^^^ SyntaxError: invalid syntax. Perhaps you forgot a comma? configure: error: Python.h not found! Please locate this file and contact ISSM developers via forum or email. make: *** [Makefile:481: config.status] Error 1 autoreconf: Entering directory `.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force -I m4 autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, './aux-config'. libtoolize: copying file './aux-config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' autoreconf: running: /home/jenkins/workspace/Debian_Linux-Python/externalpackages/autotools/install/bin/autoconf --force autoreconf: running: /home/jenkins/workspace/Debian_Linux-Python/externalpackages/autotools/install/bin/autoheader --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:17: installing './aux-config/compile' configure.ac:24: installing './aux-config/missing' src/c/Makefile.am: installing './aux-config/depcomp' autoreconf: Leaving directory `.' configure: ============================================================================ configure: = Ice-sheet and Sea-level System Model (ISSM) 4.24 configuration = configure: ============================================================================ checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking for mpicc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking whether mpicc understands -c and -o together... yes checking how to run the C preprocessor... mpicc -E checking for mpicxx... mpicxx checking whether we are using the GNU C++ compiler... yes checking whether mpicxx accepts -g... yes checking for mpifort... mpifort checking whether we are using the GNU Fortran 77 compiler... yes checking whether mpifort accepts -g... yes checking for mpifort... mpifort checking whether we are using the GNU Fortran compiler... yes checking whether mpifort accepts -g... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of mpicc... gcc3 checking dependency style of mpicxx... gcc3 checking whether make supports nested variables... (cached) yes checking for ar... ar checking the archiver (ar) interface... ar checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... yes checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... yes checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for mpifort option to produce PIC... -fPIC checking if mpifort PIC flag -fPIC works... yes checking if mpifort static flag -static works... yes checking if mpifort supports -c -o file.o... yes checking if mpifort supports -c -o file.o... (cached) yes checking whether the mpifort linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for mpifort option to produce PIC... -fPIC checking if mpifort PIC flag -fPIC works... yes checking if mpifort static flag -static works... yes checking if mpifort supports -c -o file.o... yes checking if mpifort supports -c -o file.o... (cached) yes checking whether the mpifort linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: ============================================================================ configure: = Checking ISSM specific options = configure: ============================================================================ checking for date... /usr/bin/date checking for build date... Thu Apr 3 20:08:41 PDT 2025 checking user name... jenkins checking host full OS name and version... linux checking host cpu... x86_64 checking vendor... pc checking host OS name... linux checking host OS version... 6.1.0-32-amd64 checking host OS architecture... x86_64 checking for debugging support... yes checking for development support... yes checking for standalone modules build... no checking for standalone executables build... no checking for standalone libraries build... no checking for wrappers compilation... yes checking operating system type... Linux checking for Xlib (graphics library)... done checking for MATLAB... no checking for JavaScript... no checking for triangle... yes checking for Boost... no checking for Dakota... no checking for Python... yes checking for Python version... 3.11 checking for Python include directory... File "<string>", line 1 from sysconfig import get_paths as gp; print(gp()'include') ^^^^^^^^^^^^^ SyntaxError: invalid syntax. Perhaps you forgot a comma? configure: error: Python.h not found! Please locate this file and contact ISSM developers via forum or email. ISSM configuration failed (see options below) \ --prefix=${ISSM_DIR} \ --disable-static \ --enable-development \ --enable-debugging \ --with-numthreads=4 \ --with-python="${HOME}/.venv/issm/bin/python" \ --with-fortran-lib="-L/usr/lib/x86_64-linux-gnu -lgfortran" \ --with-mpi-include=${ISSM_DIR}/externalpackages/petsc/install/include \ --with-mpi-libflags="-L${ISSM_DIR}/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort" \ --with-blas-lapack-dir=${ISSM_DIR}/externalpackages/petsc/install \ --with-metis-dir=${ISSM_DIR}/externalpackages/petsc/install \ --with-parmetis-dir=${ISSM_DIR}/externalpackages/petsc/install \ --with-scalapack-dir=${ISSM_DIR}/externalpackages/petsc/install \ --with-mumps-dir=${ISSM_DIR}/externalpackages/petsc/install \ --with-petsc-dir=${ISSM_DIR}/externalpackages/petsc/install \ --with-triangle-dir=${ISSM_DIR}/externalpackages/triangle/install \ --with-m1qn3-dir=${ISSM_DIR}/externalpackages/m1qn3/install \ --with-semic-dir=${ISSM_DIR}/externalpackages/semic/install \ ISSM configuration failed! Build step 'Execute shell' marked build as failure Recording test results Finished: FAILURE