Skip to content
Aborted

Console Output

Started by upstream project "Debian_Linux-ADOL-C" build number 3255
originally caused by:
 Started by GitHub push by TidbitSoftware
Running as SYSTEM
Building remotely on Debian_12-VM (debian linux) in workspace /home/jenkins/workspace/Debian_Linux-ADOL-C/AMPI/ampion/label/Debian_12-VM
The recommended git tool is: NONE
using credential 3c85c82b-fb35-4fea-b703-0aa4f155f9c7
 > git rev-parse --resolve-git-dir /home/jenkins/workspace/Debian_Linux-ADOL-C/AMPI/ampion/label/Debian_12-VM/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10
Fetching upstream changes from git@github.com:ISSMteam/ISSM.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins
Verifying host key using known hosts file
 > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 0e1d4f4dafe1881148db078abb05b8d23af4b125 (refs/remotes/origin/main)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 0e1d4f4dafe1881148db078abb05b8d23af4b125 # timeout=10
Commit message: "CHG: Modified all basic external package installation scripts to use developers' download links, where possible"
 > git rev-list --no-walk d03a5734fd2dfcda8f49fe24b225b08f192c4550 # timeout=10
[Debian_12-VM] $ /bin/bash /tmp/jenkins18444577061613795239.sh
Cleaning up execution directory
======================================================
             Determining installation type            
======================================================
   
List of changed files
---------------------
externalpackages/autotools/install-linux.sh
externalpackages/autotools/install-mac.sh
externalpackages/autotools/install-win.sh
externalpackages/cmake/install.sh
externalpackages/m1qn3/install-linux.sh
externalpackages/m1qn3/install-mac.sh
externalpackages/m1qn3/m1qn3-3.3-distrib.tgz
externalpackages/petsc/install-3.14-win-msys2-mingw-msmpi.sh
externalpackages/shell2junit/shell2junit-1.0.0.zip
externalpackages/triangle/install-linux.sh
externalpackages/triangle/install-mac.sh
externalpackages/triangle/triangle.zip
   
-- checking for changed externalpackages... yes
-- checking for reconfiguration... yes
-- checking for recompilation... yes
======================================================
       Skipping autotools                          
======================================================
======================================================
       Skipping cmake                          
======================================================
======================================================
       Skipping petsc                          
======================================================
======================================================
       Skipping gsl                          
======================================================
======================================================
       Skipping triangle                          
======================================================
======================================================
       Installing adjoinablempi                        
======================================================
Build was aborted
Aborted by Justin Quinn
Recording test results
File adjoinablempi.tar.gz already exists and will not be downloaded...
./src/
./src/COPYRIGHT
./src/Common/
./src/Common/modified.c
./src/Common/ampi_f2c.c
./src/Common/passThrough.c
./src/Common/st.c
./src/Common/window.c
./src/Common/Makefile.am
./src/Common/Makefile.in
./src/Common/nt.c
./src/config/
./src/config/test-driver
./src/config/ltoptions.m4
./src/config/ltversion.m4
./src/config/missing
./src/config/config.sub
./src/config/install-sh
./src/config/lt~obsolete.m4
./src/config/compile
./src/config/config.guess
./src/config/libtool.m4
./src/config/ltmain.sh
./src/config/depcomp
./src/config/mpi.m4
./src/config/ltsugar.m4
./src/ampi_tape/
./src/ampi_tape/ampi_tape.c
./src/ampi_tape/ampi.c
./src/ampi_tape/ampi_tape.h
./src/ampi_tape/ampi_interface.cc
./src/ampi_tape/ampi.h
./src/Doxyfile
./src/PlainC/
./src/PlainC/modified.c
./src/PlainC/ampi_f2c.c
./src/PlainC/passThrough.c
./src/PlainC/st.c
./src/PlainC/Makefile.am
./src/PlainC/Makefile.in
./src/PlainC/nt.c
./src/configure.ac
./src/aclocal.m4
./src/ADtoolStubs/
./src/ADtoolStubs/ST/
./src/ADtoolStubs/ST/fortranSupport.F
./src/ADtoolStubs/ST/support.c
./src/ADtoolStubs/ST/Makefile.am
./src/ADtoolStubs/ST/Makefile.in
./src/ADtoolStubs/OO/
./src/ADtoolStubs/OO/support.c
./src/ADtoolStubs/OO/Makefile.am
./src/ADtoolStubs/OO/Makefile.in
./src/ampi/
./src/ampi/tape/
./src/ampi/tape/support.h
./src/ampi/adTool/
./src/ampi/adTool/support.h
./src/ampi/userIF/
./src/ampi/userIF/modified.h
./src/ampi/userIF/st.h
./src/ampi/userIF/window.h
./src/ampi/userIF/nt.h
./src/ampi/userIF/pairedWith.h
./src/ampi/userIF/activity.h
./src/ampi/userIF/libConfig.h.in
./src/ampi/userIF/request.h
./src/ampi/userIF/passThrough.h
./src/ampi/libCommon/
./src/ampi/libCommon/modified.h
./src/ampi/libCommon/st.h
./src/ampi/ampif.h
./src/ampi/Makefile.am
./src/ampi/Makefile.in
./src/ampi/bookkeeping/
./src/ampi/bookkeeping/support.h
./src/ampi/ampi.h
./src/Makefile.am
./src/Check/
./src/Check/linkComplete.c
./src/Check/Makefile.am
./src/Check/Makefile.in
./src/autogen.sh
./src/Tape/
./src/Tape/support.c
./src/Tape/Makefile.am
./src/Tape/Makefile.in
./src/Bookkeeping/
./src/Bookkeeping/support.c
./src/Bookkeeping/Makefile.am
./src/Bookkeeping/Makefile.in
./src/autom4te.cache/
./src/autom4te.cache/traces.1
./src/autom4te.cache/requests
./src/autom4te.cache/output.2
./src/autom4te.cache/output.0
./src/autom4te.cache/traces.2
./src/autom4te.cache/traces.0
./src/autom4te.cache/output.1
./src/Makefile.in
./src/doc/
./src/doc/html/
./src/doc/html/dtype_illustration.svg
./src/doc/html/dtype_illustration.png
./src/doc/autodiff.bib
./src/configure
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking target system type... x86_64-pc-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports nested variables... (cached) yes
checking how to print strings... printf
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... 
checking dynamic linker characteristics... ======================================================
    ERROR: installation of adjoinablempi failed        
======================================================
Finished: ABORTED