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Started by GitHub push by larour Running as SYSTEM Building remotely on Debian_12-VM (debian linux) in workspace /home/jenkins/workspace/Debian_Linux-CoDiPack The recommended git tool is: NONE using credential 3c85c82b-fb35-4fea-b703-0aa4f155f9c7 > git rev-parse --resolve-git-dir /home/jenkins/workspace/Debian_Linux-CoDiPack/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10 Fetching upstream changes from git@github.com:ISSMteam/ISSM.git > git --version # timeout=10 > git --version # 'git version 2.39.2' using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins Verifying host key using known hosts file > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/main^{commit} # timeout=10 Checking out Revision 92249851e6ffd9ab167c8a796ebcfdba3d00e288 (refs/remotes/origin/main) > git config core.sparsecheckout # timeout=10 > git checkout -f 92249851e6ffd9ab167c8a796ebcfdba3d00e288 # timeout=10 Commit message: "CHG: fixing some segfaults." > git rev-list --no-walk 06f3184ce1d95c463e736eaeb74f3fecdca60a40 # timeout=10 [Debian_Linux-CoDiPack] $ /bin/bash /tmp/jenkins7525937736676618859.sh Cleaning up execution directory ====================================================== Determining installation type ====================================================== List of changed files --------------------- src/c/classes/Elements/Element.cpp src/c/classes/Elements/Element.h src/c/classes/IoModel.cpp src/m/classes/mask.m -- checking for changed externalpackages... no -- checking for reconfiguration... no -- checking for recompilation... yes ====================================================== Skipping autotools ====================================================== ====================================================== Skipping cmake ====================================================== ====================================================== Skipping petsc ====================================================== ====================================================== Skipping gsl ====================================================== ====================================================== Skipping triangle ====================================================== ====================================================== Skipping m1qn3 ====================================================== ====================================================== Skipping medipack ====================================================== ====================================================== Skipping codipack ====================================================== ====================================================== Skipping semic ====================================================== ====================================================== Skipping shell2junit ====================================================== ====================================================== Compiling ISSM ====================================================== Making with 8 CPUs make all-recursive make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' Making all in src make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' Making all in c make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' CXX main/issm-issm.o CXX modules/BamgConvertMeshx/libISSMCore_la-BamgConvertMeshx.lo CXX modules/BamgTriangulatex/libISSMCore_la-BamgTriangulatex.lo CXX datastructures/libISSMCore_la-DataSet.lo CXX classes/libISSMCore_la-IoModel.lo CXX classes/libISSMCore_la-FemModel.lo CXX classes/Loads/libISSMCore_la-Friction.lo CXX classes/Constraints/libISSMCore_la-SpcTransient.lo CXX classes/libISSMCore_la-DependentObject.lo CXX classes/libISSMCore_la-Vertices.lo CXX classes/libISSMCore_la-Numberedcostfunction.lo CXX classes/libISSMCore_la-Misfit.lo CXX classes/libISSMCore_la-Cfsurfacesquare.lo CXX classes/libISSMCore_la-Cfsurfacesquaretransient.lo CXX classes/libISSMCore_la-Cfdragcoeffabsgrad.lo CXX classes/libISSMCore_la-Cfdragcoeffabsgradtransient.lo CXX classes/libISSMCore_la-Cfrheologybbarabsgrad.lo CXX classes/libISSMCore_la-Cfrheologybbarabsgradtransient.lo CXX classes/libISSMCore_la-Cfsurfacelogvel.lo CXX classes/libISSMCore_la-Cflevelsetmisfit.lo CXX classes/libISSMCore_la-Regionaloutput.lo CXX classes/libISSMCore_la-Nodalvalue.lo CXX classes/libISSMCore_la-Node.lo CXX classes/libISSMCore_la-Vertex.lo CXX classes/libISSMCore_la-Hook.lo CXX classes/libISSMCore_la-Radar.lo CXX classes/libISSMCore_la-BarystaticContributions.lo CXX classes/Elements/libISSMCore_la-Element.lo CXX classes/Elements/libISSMCore_la-Elements.lo CXX classes/Elements/libISSMCore_la-ElementHook.lo CXX classes/Elements/libISSMCore_la-Seg.lo CXX classes/Elements/libISSMCore_la-SegRef.lo CXX classes/Elements/libISSMCore_la-Tria.lo CXX classes/Elements/libISSMCore_la-TriaRef.lo CXX classes/Elements/libISSMCore_la-Tetra.lo CXX classes/Elements/libISSMCore_la-TetraRef.lo CXX classes/Elements/libISSMCore_la-Penta.lo CXX classes/Elements/libISSMCore_la-PentaRef.lo CXX classes/Materials/libISSMCore_la-Matice.lo CXX classes/Materials/libISSMCore_la-Matlitho.lo CXX classes/Materials/libISSMCore_la-Matestar.lo CXX classes/Constraints/libISSMCore_la-SpcStatic.lo CXX classes/Constraints/libISSMCore_la-SpcDynamic.lo CXX classes/Loads/libISSMCore_la-Channel.lo CXX classes/Loads/libISSMCore_la-Penpair.lo CXX classes/Loads/libISSMCore_la-Pengrid.lo CXX classes/Loads/libISSMCore_la-Moulin.lo CXX classes/Loads/libISSMCore_la-Numericalflux.lo CXX classes/Loads/libISSMCore_la-Neumannflux.lo CXX classes/matrix/libISSMCore_la-ElementMatrix.lo CXX classes/matrix/libISSMCore_la-ElementVector.lo CXX classes/Params/libISSMCore_la-BoolParam.lo CXX classes/Params/libISSMCore_la-ControlParam.lo CXX classes/Params/libISSMCore_la-IntParam.lo CXX classes/Params/libISSMCore_la-IntVecParam.lo CXX classes/Params/libISSMCore_la-IntMatParam.lo CXX classes/Params/libISSMCore_la-DoubleParam.lo CXX classes/Params/libISSMCore_la-FileParam.lo CXX classes/Params/libISSMCore_la-StringArrayParam.lo CXX classes/Params/libISSMCore_la-DoubleMatParam.lo CXX classes/Params/libISSMCore_la-DoubleTransientMatParam.lo CXX classes/Params/libISSMCore_la-DoubleMatArrayParam.lo CXX classes/Params/libISSMCore_la-DoubleVecParam.lo CXX classes/Params/libISSMCore_la-StringParam.lo CXX classes/Params/libISSMCore_la-MatrixParam.lo CXX classes/Params/libISSMCore_la-VectorParam.lo CXX classes/Params/libISSMCore_la-TransientParam.lo CXX classes/Params/libISSMCore_la-TransientArrayParam.lo CXX classes/Params/libISSMCore_la-DataSetParam.lo CXX modules/MmeToInputFromIdx/libISSMCore_la-MmeToInputFromIdx.lo CXX modules/MmeToInputx/libISSMCore_la-MmeToInputx.lo CXX modules/ModelProcessorx/libISSMCore_la-ModelProcessorx.lo CXX modules/ModelProcessorx/libISSMCore_la-ElementsAndVerticesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-NodesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-EdgesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-FacesPartitioning.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateParameters.lo CXX modules/ModelProcessorx/Autodiff/libISSMCore_la-CreateParametersAutodiff.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateFaces.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateEdges.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateSingleNodeToElementConnectivity.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateNumberNodeToElementConnectivity.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateElementsVerticesAndMaterials.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateNodes.lo CXX modules/ParseToolkitsOptionsx/libISSMCore_la-ParseToolkitsOptionsx.lo CXX modules/NodesDofx/libISSMCore_la-NodesDofx.lo CXX modules/NodalValuex/libISSMCore_la-NodalValuex.lo CXX modules/VertexCoordinatesx/libISSMCore_la-VertexCoordinatesx.lo CXX modules/ElementCoordinatesx/libISSMCore_la-ElementCoordinatesx.lo CXX modules/OutputResultsx/libISSMCore_la-OutputResultsx.lo CXX modules/InputDepthAverageAtBasex/libISSMCore_la-InputDepthAverageAtBasex.lo CXX modules/InputDuplicatex/libISSMCore_la-InputDuplicatex.lo CXX modules/InputExtrudex/libISSMCore_la-InputExtrudex.lo CXX modules/SurfaceAreax/libISSMCore_la-SurfaceAreax.lo CXX modules/AllocateSystemMatricesx/libISSMCore_la-AllocateSystemMatricesx.lo CXX modules/CreateJacobianMatrixx/libISSMCore_la-CreateJacobianMatrixx.lo CXX modules/SystemMatricesx/libISSMCore_la-SystemMatricesx.lo CXX modules/CreateNodalConstraintsx/libISSMCore_la-CreateNodalConstraintsx.lo CXX modules/UpdateDynamicConstraintsx/libISSMCore_la-UpdateDynamicConstraintsx.lo CXX modules/IoModelToConstraintsx/libISSMCore_la-IoModelToConstraintsx.lo CXX modules/SetActiveNodesLSMx/libISSMCore_la-SetActiveNodesLSMx.lo CXX modules/InputUpdateFromConstantx/libISSMCore_la-InputUpdateFromConstantx.lo CXX modules/InputUpdateFromSolutionx/libISSMCore_la-InputUpdateFromSolutionx.lo CXX modules/GeothermalFluxx/libISSMCore_la-GeothermalFluxx.lo CXX modules/GetSolutionFromInputsx/libISSMCore_la-GetSolutionFromInputsx.lo CXX modules/GetVectorFromInputsx/libISSMCore_la-GetVectorFromInputsx.lo CXX modules/InputUpdateFromVectorx/libISSMCore_la-InputUpdateFromVectorx.lo CXX modules/FloatingiceMeltingRatex/libISSMCore_la-FloatingiceMeltingRatex.lo CXX modules/FloatingiceMeltingRatePicox/libISSMCore_la-FloatingiceMeltingRatePicox.lo CXX modules/FrontalForcingsx/libISSMCore_la-FrontalForcingsx.lo CXX modules/ConfigureObjectsx/libISSMCore_la-ConfigureObjectsx.lo CXX modules/SpcNodesx/libISSMCore_la-SpcNodesx.lo CXX modules/SurfaceMassBalancex/libISSMCore_la-SurfaceMassBalancex.lo CXX modules/SurfaceMassBalancex/libISSMCore_la-Gembx.lo CXX modules/Reducevectorgtofx/libISSMCore_la-Reducevectorgtofx.lo CXX modules/Reduceloadx/libISSMCore_la-Reduceloadx.lo CXX modules/ConstraintsStatex/libISSMCore_la-ConstraintsStatex.lo CXX modules/ResetConstraintsx/libISSMCore_la-ResetConstraintsx.lo CXX modules/ResetFSBasalBoundaryConditionx/libISSMCore_la-ResetFSBasalBoundaryConditionx.lo CXX modules/StochasticForcingx/libISSMCore_la-StochasticForcingx.lo CXX modules/Mergesolutionfromftogx/libISSMCore_la-Mergesolutionfromftogx.lo CXX modules/UpdateMmesx/libISSMCore_la-UpdateMmesx.lo CXX cores/libISSMCore_la-ResetBoundaryConditions.lo CXX cores/libISSMCore_la-WrapperCorePointerFromSolutionEnum.lo CXX cores/libISSMCore_la-WrapperPreCorePointerFromSolutionEnum.lo CXX cores/libISSMCore_la-CorePointerFromSolutionEnum.lo CXX cores/libISSMCore_la-ad_core.lo CXX analyses/libISSMCore_la-EnumToAnalysis.lo CXX solutionsequences/libISSMCore_la-solutionsequence_la.lo CXX solutionsequences/libISSMCore_la-solutionsequence_la_theta.lo CXX solutionsequences/libISSMCore_la-solutionsequence_linear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_nonlinear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_newton.lo CXX solutionsequences/libISSMCore_la-solutionsequence_fct.lo CXX solutionsequences/libISSMCore_la-solutionsequence_schurcg.lo CXX solutionsequences/libISSMCore_la-solutionsequence_sampling.lo CXX solutionsequences/libISSMCore_la-convergence.lo CXX classes/Options/libISSMCore_la-OptionUtilities.lo CXX classes/libISSMCore_la-RiftStruct.lo CXX modules/ModelProcessorx/Transient/libISSMCore_la-UpdateElementsTransient.lo CXX modules/ModelProcessorx/Transient/libISSMCore_la-UpdateParametersTransient.lo CXX cores/libISSMCore_la-transient_core.lo CXX cores/libISSMCore_la-steadystate_core.lo CXX cores/libISSMCore_la-masstransport_core.lo CXX cores/libISSMCore_la-mmemasstransport_core.lo CXX cores/libISSMCore_la-oceantransport_core.lo CXX cores/libISSMCore_la-depthaverage_core.lo CXX cores/libISSMCore_la-extrudefrombase_core.lo CXX cores/libISSMCore_la-extrudefromtop_core.lo CXX cores/libISSMCore_la-thermal_core.lo CXX cores/libISSMCore_la-smb_core.lo CXX cores/libISSMCore_la-bmb_core.lo CXX cores/libISSMCore_la-debris_core.lo CXX solutionsequences/libISSMCore_la-solutionsequence_thermal_nonlinear.lo CXX modules/ControlInputSetGradientx/libISSMCore_la-ControlInputSetGradientx.lo CXX modules/GetVectorFromControlInputsx/libISSMCore_la-GetVectorFromControlInputsx.lo CXX modules/SetControlInputsFromVectorx/libISSMCore_la-SetControlInputsFromVectorx.lo CXX modules/ModelProcessorx/Control/libISSMCore_la-CreateParametersControl.lo CXX modules/ModelProcessorx/Control/libISSMCore_la-UpdateElementsAndMaterialsControl.lo CXX modules/SurfaceAbsVelMisfitx/libISSMCore_la-SurfaceAbsVelMisfitx.lo CXX modules/SurfaceRelVelMisfitx/libISSMCore_la-SurfaceRelVelMisfitx.lo CXX modules/SurfaceLogVelMisfitx/libISSMCore_la-SurfaceLogVelMisfitx.lo CXX modules/SurfaceLogVxVyMisfitx/libISSMCore_la-SurfaceLogVxVyMisfitx.lo CXX modules/SurfaceAverageVelMisfitx/libISSMCore_la-SurfaceAverageVelMisfitx.lo CXX modules/ThicknessAbsMisfitx/libISSMCore_la-ThicknessAbsMisfitx.lo CXX modules/Gradjx/libISSMCore_la-Gradjx.lo CXX modules/DragCoefficientAbsGradientx/libISSMCore_la-DragCoefficientAbsGradientx.lo CXX modules/ThicknessAlongGradientx/libISSMCore_la-ThicknessAlongGradientx.lo CXX modules/ThicknessAcrossGradientx/libISSMCore_la-ThicknessAcrossGradientx.lo CXX modules/RheologyBbarAbsGradientx/libISSMCore_la-RheologyBbarAbsGradientx.lo CXX modules/RheologyBAbsGradientx/libISSMCore_la-RheologyBAbsGradientx.lo CXX cores/libISSMCore_la-control_core.lo CXX cores/libISSMCore_la-controltao_core.lo CXX cores/libISSMCore_la-controlm1qn3_core.lo CXX cores/libISSMCore_la-controladm1qn3_core.lo CXX cores/libISSMCore_la-controlvalidation_core.lo CXX cores/libISSMCore_la-adjointstressbalance_core.lo CXX cores/libISSMCore_la-adjointbalancethickness_core.lo CXX cores/libISSMCore_la-adjointbalancethickness2_core.lo CXX cores/libISSMCore_la-AdjointCorePointerFromSolutionEnum.lo CXX solutionsequences/libISSMCore_la-solutionsequence_adjoint_linear.lo CXX cores/libISSMCore_la-hydrology_core.lo CXX solutionsequences/libISSMCore_la-solutionsequence_hydro_nonlinear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_shakti_nonlinear.lo CXX solutionsequences/libISSMCore_la-solutionsequence_glads_nonlinear.lo CXX cores/libISSMCore_la-stressbalance_core.lo CXX solutionsequences/libISSMCore_la-solutionsequence_stokescoupling_nonlinear.lo CXX cores/libISSMCore_la-balancethickness_core.lo CXX cores/libISSMCore_la-balancethickness2_core.lo CXX cores/libISSMCore_la-balancevelocity_core.lo CXX cores/libISSMCore_la-surfaceslope_core.lo CXX cores/libISSMCore_la-bedslope_core.lo CXX cores/libISSMCore_la-damage_core.lo CXX cores/libISSMCore_la-levelsetfunctionslope_core.lo CXX cores/libISSMCore_la-movingfront_core.lo CXX cores/libISSMCore_la-groundingline_core.lo CXX modules/GroundinglineMigrationx/libISSMCore_la-GroundinglineMigrationx.lo CXX classes/Loads/libISSMCore_la-Riftfront.lo CXX modules/ConstraintsStatex/libISSMCore_la-RiftConstraintsState.lo CXX modules/ModelProcessorx/libISSMCore_la-CreateOutputDefinitions.lo CXX modules/OutputDefinitionsResponsex/libISSMCore_la-OutputDefinitionsResponsex.lo CXX modules/InterpFromMeshToMesh2dx/libISSMCore_la-InterpFromMeshToMesh2dx.lo CXX classes/Inputs/libISSMCore_la-BoolInput.lo CXX classes/Inputs/libISSMCore_la-DoubleInput.lo CXX classes/Inputs/libISSMCore_la-IntInput.lo CXX classes/Inputs/libISSMCore_la-ElementInput.lo CXX classes/Inputs/libISSMCore_la-SegInput.lo CXX classes/Inputs/libISSMCore_la-TriaInput.lo CXX classes/Inputs/libISSMCore_la-PentaInput.lo CXX classes/Inputs/libISSMCore_la-ArrayInput.lo CXX classes/Inputs/libISSMCore_la-IntArrayInput.lo CXX analyses/libISSMCore_la-AdjointBalancethicknessAnalysis.lo CXX analyses/libISSMCore_la-AdjointBalancethickness2Analysis.lo CXX analyses/libISSMCore_la-AdjointHorizAnalysis.lo CXX analyses/libISSMCore_la-AgeAnalysis.lo CXX analyses/libISSMCore_la-BalancethicknessAnalysis.lo CXX analyses/libISSMCore_la-Balancethickness2Analysis.lo CXX analyses/libISSMCore_la-BalancethicknessSoftAnalysis.lo CXX analyses/libISSMCore_la-BalancevelocityAnalysis.lo CXX analyses/libISSMCore_la-L2ProjectionBaseAnalysis.lo CXX analyses/libISSMCore_la-DamageEvolutionAnalysis.lo CXX modules/Damagex/libISSMCore_la-Damagex.lo CXX analyses/libISSMCore_la-DebrisAnalysis.lo CXX analyses/libISSMCore_la-StressbalanceAnalysis.lo CXX analyses/libISSMCore_la-UzawaPressureAnalysis.lo CXX analyses/libISSMCore_la-StressbalanceSIAAnalysis.lo CXX analyses/libISSMCore_la-StressbalanceVerticalAnalysis.lo CXX analyses/libISSMCore_la-EnthalpyAnalysis.lo CXX analyses/libISSMCore_la-GLheightadvectionAnalysis.lo CXX analyses/libISSMCore_la-HydrologyShreveAnalysis.lo CXX analyses/libISSMCore_la-HydrologyTwsAnalysis.lo CXX analyses/libISSMCore_la-HydrologyShaktiAnalysis.lo CXX analyses/libISSMCore_la-HydrologyPismAnalysis.lo CXX analyses/libISSMCore_la-HydrologyGlaDSAnalysis.lo CXX analyses/libISSMCore_la-HydrologyDCInefficientAnalysis.lo CXX analyses/libISSMCore_la-HydrologyDCEfficientAnalysis.lo CXX analyses/libISSMCore_la-HydrologyArmapwAnalysis.lo CXX analyses/libISSMCore_la-L2ProjectionEPLAnalysis.lo CXX analyses/libISSMCore_la-MeltingAnalysis.lo CXX analyses/libISSMCore_la-MasstransportAnalysis.lo CXX analyses/libISSMCore_la-MmemasstransportAnalysis.lo CXX analyses/libISSMCore_la-OceantransportAnalysis.lo CXX analyses/libISSMCore_la-SmbAnalysis.lo CXX analyses/libISSMCore_la-FreeSurfaceBaseAnalysis.lo CXX analyses/libISSMCore_la-FreeSurfaceTopAnalysis.lo CXX analyses/libISSMCore_la-ExtrudeFromBaseAnalysis.lo CXX analyses/libISSMCore_la-ExtrudeFromTopAnalysis.lo CXX analyses/libISSMCore_la-DepthAverageAnalysis.lo CXX analyses/libISSMCore_la-ThermalAnalysis.lo CXX analyses/libISSMCore_la-SmoothAnalysis.lo CXX analyses/libISSMCore_la-LevelsetAnalysis.lo CXX modules/Calvingx/libISSMCore_la-Calvingx.lo CXX modules/KillIcebergsx/libISSMCore_la-KillIcebergsx.lo CXX analyses/libISSMCore_la-ExtrapolationAnalysis.lo CXX cores/libISSMCore_la-esa_core.lo CXX analyses/libISSMCore_la-EsaAnalysis.lo CXX cores/libISSMCore_la-sampling_core.lo CXX analyses/libISSMCore_la-SamplingAnalysis.lo CXX modules/Trianglex/libISSMModules_la-Trianglex.lo CXX modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo CXX modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo CXX modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo CXX modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo CXX modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo CXX modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo CXX modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo CXX modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo CXX modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo CXX modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo CXX modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo CXX modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo CXX modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo CXX modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo CXX modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo CXX main/issm_slc-issm_slc.o CXXLD libISSMCore.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD libISSMModules.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD issm_slc.exe CXXLD issm.exe make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' Making all in m make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' Making all in wrappers make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' Making all in matlab make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' CXX io/libISSMMatlab_la-CheckNumMatlabArguments.lo CXX io/libISSMMatlab_la-FetchMatlabData.lo CXX io/libISSMMatlab_la-WriteMatlabData.lo CXX io/libISSMApi_matlab_la-ApiPrintf.lo CXX ../BamgConvertMesh/BamgConvertMesh_matlab_la-BamgConvertMesh.lo CXX ../BamgMesher/BamgMesher_matlab_la-BamgMesher.lo CXX ../BamgTriangulate/BamgTriangulate_matlab_la-BamgTriangulate.lo CXX ../ContourToMesh/ContourToMesh_matlab_la-ContourToMesh.lo CXX ../ContourToNodes/ContourToNodes_matlab_la-ContourToNodes.lo CXX ../DistanceToMaskBoundary/DistanceToMaskBoundary_matlab_la-DistanceToMaskBoundary.lo CXX ../ElementConnectivity/ElementConnectivity_matlab_la-ElementConnectivity.lo CXX ../ExpSimplify/ExpSimplify_matlab_la-ExpSimplify.lo CXX ../ExpToLevelSet/ExpToLevelSet_matlab_la-ExpToLevelSet.lo CXX ../InterpFromGridToMesh/InterpFromGridToMesh_matlab_la-InterpFromGridToMesh.lo CXX ../InterpFromMesh2d/InterpFromMesh2d_matlab_la-InterpFromMesh2d.lo CXX ../InterpFromMeshToGrid/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.lo CXX ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.lo CXX ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.lo CXX ../IssmConfig/IssmConfig_matlab_la-IssmConfig.lo CXX ../M1qn3/M1qn3_matlab_la-M1qn3.lo CXX ../MeshPartition/MeshPartition_matlab_la-MeshPartition.lo CXX ../MeshProfileIntersection/MeshProfileIntersection_matlab_la-MeshProfileIntersection.lo CXX ../NodeConnectivity/NodeConnectivity_matlab_la-NodeConnectivity.lo CXX ../PointCloudFindNeighbors/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.lo CXX ../ProcessRifts/ProcessRifts_matlab_la-ProcessRifts.lo CXX ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.lo CXX ../Scotch/Scotch_matlab_la-Scotch.lo CXX ../Triangle/Triangle_matlab_la-Triangle.lo CXXLD libISSMMatlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD libISSMApi_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD BamgConvertMesh_matlab.la CXXLD BamgMesher_matlab.la CXXLD BamgTriangulate_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ContourToMesh_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ContourToNodes_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD DistanceToMaskBoundary_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ElementConnectivity_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ExpSimplify_matlab.la CXXLD ExpToLevelSet_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD InterpFromGridToMesh_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD InterpFromMesh2d_matlab.la CXXLD InterpFromMeshToGrid_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD InterpFromMeshToMesh2d_matlab.la CXXLD InterpFromMeshToMesh3d_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD IssmConfig_matlab.la CXXLD M1qn3_matlab.la CXXLD MeshPartition_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD MeshProfileIntersection_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD NodeConnectivity_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD PointCloudFindNeighbors_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD ProcessRifts_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD PropagateFlagsFromConnectivity_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') CXXLD Scotch_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') CXXLD Triangle_matlab.la ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') ar: `u' modifier ignored since `D' is the default (see `U') make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' Making install in src make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' Making install in c make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' CXXLD issm.exe CXXLD issm_slc.exe make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' CXXLD issm.exe CXXLD issm_slc.exe /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libISSMCore.la libISSMOverload.la libISSMModules.la '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' libtool: install: /usr/bin/install -c .libs/libISSMCore.so /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.so libtool: install: /usr/bin/install -c .libs/libISSMCore.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.la libtool: install: /usr/bin/install -c .libs/libISSMOverload.so /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.so libtool: install: /usr/bin/install -c .libs/libISSMOverload.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.la libtool: warning: relinking 'libISSMModules.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/c; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -g -O2 -std=c++11 -g -O2 -std=c++11 -avoid-version -o libISSMModules.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ./shared/Threads/libISSMModules_la-LaunchThread.lo ./shared/Threads/libISSMModules_la-PartitionRange.lo ./shared/Exp/libISSMModules_la-exp.lo ./shared/Triangle/libISSMModules_la-AssociateSegmentToElement.lo ./shared/Triangle/libISSMModules_la-GridInsideHole.lo ./shared/Triangle/libISSMModules_la-OrderSegments.lo ./shared/Triangle/libISSMModules_la-SplitMeshForRifts.lo ./shared/Triangle/libISSMModules_la-TriangleUtils.lo ./modules/Trianglex/libISSMModules_la-Trianglex.lo ./modules/ProcessRiftsx/libISSMModules_la-ProcessRiftsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsx.lo ./modules/PointCloudFindNeighborsx/libISSMModules_la-PointCloudFindNeighborsxt.lo ./modules/InterpFromGridToMeshx/libISSMModules_la-InterpFromGridToMeshx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dx.lo ./modules/InterpFromMesh2dx/libISSMModules_la-InterpFromMesh2dxt.lo ./modules/InterpFromMeshToMesh3dx/libISSMModules_la-InterpFromMeshToMesh3dx.lo ./modules/InterpFromMeshToGridx/libISSMModules_la-InterpFromMeshToGridx.lo ./modules/MeshProfileIntersectionx/libISSMModules_la-MeshProfileIntersectionx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshx.lo ./modules/ContourToMeshx/libISSMModules_la-ContourToMeshxt.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetx.lo ./modules/ExpToLevelSetx/libISSMModules_la-ExpToLevelSetxt.lo ./modules/ContourToNodesx/libISSMModules_la-ContourToNodesx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryx.lo ./modules/DistanceToMaskBoundaryx/libISSMModules_la-DistanceToMaskBoundaryxt.lo ./modules/NodeConnectivityx/libISSMModules_la-NodeConnectivityx.lo ./modules/ElementConnectivityx/libISSMModules_la-ElementConnectivityx.lo ./modules/PropagateFlagsFromConnectivityx/libISSMModules_la-PropagateFlagsFromConnectivityx.lo ./libISSMCore.la -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/triangle/install/lib -ltriangle -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lflapack -lfblas ) libtool: install: /usr/bin/install -c .libs/libISSMModules.soT /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.so libtool: install: /usr/bin/install -c .libs/libISSMModules.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.la libtool: install: /usr/bin/install -c .libs/libISSMCore.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMCore.a libtool: install: /usr/bin/install -c .libs/libISSMOverload.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMOverload.a libtool: install: /usr/bin/install -c .libs/libISSMModules.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMModules.a libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-CoDiPack/aux-config:/home/jenkins/workspace/Debian_Linux-CoDiPack/scripts:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/dyson/:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ---------------------------------------------------------------------- Libraries have been installed in: /home/jenkins/workspace/Debian_Linux-CoDiPack/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c issm.exe issm_slc.exe '/home/jenkins/workspace/Debian_Linux-CoDiPack/bin' libtool: install: /usr/bin/install -c .libs/issm.exe /home/jenkins/workspace/Debian_Linux-CoDiPack/bin/issm.exe libtool: install: /usr/bin/install -c .libs/issm_slc.exe /home/jenkins/workspace/Debian_Linux-CoDiPack/bin/issm_slc.exe make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/c' Making install in m make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/m' Making install in wrappers make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' Making install in matlab make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' /usr/bin/mkdir -p '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' /bin/bash ../../../libtool --mode=install /usr/bin/install -c libISSMMatlab.la libISSMApi_matlab.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la M1qn3_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la '/home/jenkins/workspace/Debian_Linux-CoDiPack/lib' libtool: warning: relinking 'libISSMMatlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -avoid-version -o libISSMMatlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ./io/libISSMMatlab_la-CheckNumMatlabArguments.lo ./io/libISSMMatlab_la-FetchMatlabData.lo ./io/libISSMMatlab_la-WriteMatlabData.lo ./../../c/libISSMCore.la ./../../c/libISSMModules.la -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -ldmumps -lmumps_common -lpord -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lscalapack -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lflapack -lfblas -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lparmetis -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lmetis -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/lib -lmpi -lmpicxx -lmpifort -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/gsl/install/lib -lgsl -lgslcblas -lm -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/libISSMMatlab.soT /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.so libtool: install: /usr/bin/install -c .libs/libISSMMatlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.la libtool: install: /usr/bin/install -c .libs/libISSMApi_matlab.so /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi_matlab.so libtool: install: /usr/bin/install -c .libs/libISSMApi_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi_matlab.la libtool: warning: relinking 'BamgConvertMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgConvertMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../BamgConvertMesh/BamgConvertMesh_matlab_la-BamgConvertMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.la libtool: warning: relinking 'BamgMesher_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgMesher_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../BamgMesher/BamgMesher_matlab_la-BamgMesher.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.la libtool: warning: relinking 'BamgTriangulate_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o BamgTriangulate_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../BamgTriangulate/BamgTriangulate_matlab_la-BamgTriangulate.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.la libtool: warning: relinking 'ContourToMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ContourToMesh/ContourToMesh_matlab_la-ContourToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.la libtool: warning: relinking 'ContourToNodes_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ContourToNodes_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ContourToNodes/ContourToNodes_matlab_la-ContourToNodes.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.la libtool: warning: relinking 'DistanceToMaskBoundary_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o DistanceToMaskBoundary_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../DistanceToMaskBoundary/DistanceToMaskBoundary_matlab_la-DistanceToMaskBoundary.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.la libtool: warning: relinking 'ElementConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ElementConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ElementConnectivity/ElementConnectivity_matlab_la-ElementConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.la libtool: warning: relinking 'ExpSimplify_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpSimplify_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ExpSimplify/ExpSimplify_matlab_la-ExpSimplify.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.la libtool: warning: relinking 'ExpToLevelSet_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ExpToLevelSet_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ExpToLevelSet/ExpToLevelSet_matlab_la-ExpToLevelSet.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.la libtool: warning: relinking 'InterpFromGridToMesh_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromGridToMesh_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromGridToMesh/InterpFromGridToMesh_matlab_la-InterpFromGridToMesh.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.la libtool: warning: relinking 'InterpFromMesh2d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMesh2d/InterpFromMesh2d_matlab_la-InterpFromMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.la libtool: warning: relinking 'InterpFromMeshToGrid_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToGrid_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMeshToGrid/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.la libtool: warning: relinking 'InterpFromMeshToMesh2d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh2d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.la libtool: warning: relinking 'InterpFromMeshToMesh3d_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o InterpFromMeshToMesh3d_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.la libtool: warning: relinking 'IssmConfig_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o IssmConfig_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../IssmConfig/IssmConfig_matlab_la-IssmConfig.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.la libtool: warning: relinking 'M1qn3_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o M1qn3_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../M1qn3/M1qn3_matlab_la-M1qn3.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/M1qn3_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/M1qn3_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/M1qn3_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/M1qn3_matlab.la libtool: warning: relinking 'MeshPartition_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshPartition_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../MeshPartition/MeshPartition_matlab_la-MeshPartition.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.la libtool: warning: relinking 'MeshProfileIntersection_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o MeshProfileIntersection_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../MeshProfileIntersection/MeshProfileIntersection_matlab_la-MeshProfileIntersection.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.la libtool: warning: relinking 'NodeConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o NodeConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../NodeConnectivity/NodeConnectivity_matlab_la-NodeConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.la libtool: warning: relinking 'PointCloudFindNeighbors_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PointCloudFindNeighbors_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../PointCloudFindNeighbors/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.la libtool: warning: relinking 'ProcessRifts_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o ProcessRifts_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../ProcessRifts/ProcessRifts_matlab_la-ProcessRifts.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.la libtool: warning: relinking 'PropagateFlagsFromConnectivity_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o PropagateFlagsFromConnectivity_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.la libtool: warning: relinking 'Scotch_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Scotch_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../Scotch/Scotch_matlab_la-Scotch.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat ) libtool: install: /usr/bin/install -c .libs/Scotch_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Scotch_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/Scotch_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Scotch_matlab.la libtool: warning: relinking 'Triangle_matlab.la' libtool: install: (cd /home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab; /bin/bash "/home/jenkins/workspace/Debian_Linux-CoDiPack/libtool" --silent --tag CXX --mode=relink g++ -DTRILIBRARY -DANSI_DECLARATORS -DNO_TIMER -I/usr/local/MATLAB/R2023b/extern/include -fPIC -D_WRAPPERS_ -g -O2 -std=c++11 -g -O2 -std=c++11 -module -shrext .mexa64 -no-undefined --export-dynamic -rdynamic -avoid-version -o Triangle_matlab.la -rpath /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ../Triangle/Triangle_matlab_la-Triangle.lo ./libISSMMatlab.la ../../c/libISSMCore.la ../../c/libISSMModules.la ./libISSMApi_matlab.la -L/usr/lib/x86_64-linux-gnu -lgfortran -lmex -lstdc++ -Wl,--as-needed -Wl,-rpath-link,/usr/local/MATLAB/R2023b/bin/glnxa64 -L/usr/local/MATLAB/R2023b/bin/glnxa64 -Wl,-rpath-link,/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -L/usr/local/MATLAB/R2023b/extern/bin/glnxa64 -lMatlabDataArray -lmx -lmex -lm -lmat -L/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/triangle/install/lib -ltriangle ) libtool: install: /usr/bin/install -c .libs/Triangle_matlab.mexa64T /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.mexa64 libtool: install: /usr/bin/install -c .libs/Triangle_matlab.lai /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.la libtool: install: /usr/bin/install -c .libs/libISSMMatlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMMatlab.a libtool: install: /usr/bin/install -c .libs/libISSMApi_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/libISSMApi_matlab.a libtool: install: /usr/bin/install -c .libs/BamgConvertMesh_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgConvertMesh_matlab.a libtool: install: /usr/bin/install -c .libs/BamgMesher_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgMesher_matlab.a libtool: install: /usr/bin/install -c .libs/BamgTriangulate_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/BamgTriangulate_matlab.a libtool: install: /usr/bin/install -c .libs/ContourToMesh_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToMesh_matlab.a libtool: install: /usr/bin/install -c .libs/ContourToNodes_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ContourToNodes_matlab.a libtool: install: /usr/bin/install -c .libs/DistanceToMaskBoundary_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/DistanceToMaskBoundary_matlab.a libtool: install: /usr/bin/install -c .libs/ElementConnectivity_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ElementConnectivity_matlab.a libtool: install: /usr/bin/install -c .libs/ExpSimplify_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpSimplify_matlab.a libtool: install: /usr/bin/install -c .libs/ExpToLevelSet_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ExpToLevelSet_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromGridToMesh_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromGridToMesh_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMesh2d_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMesh2d_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMeshToGrid_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToGrid_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh2d_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh2d_matlab.a libtool: install: /usr/bin/install -c .libs/InterpFromMeshToMesh3d_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/InterpFromMeshToMesh3d_matlab.a libtool: install: /usr/bin/install -c .libs/IssmConfig_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/IssmConfig_matlab.a libtool: install: /usr/bin/install -c .libs/M1qn3_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/M1qn3_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/M1qn3_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/M1qn3_matlab.a libtool: install: /usr/bin/install -c .libs/MeshPartition_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshPartition_matlab.a libtool: install: /usr/bin/install -c .libs/MeshProfileIntersection_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/MeshProfileIntersection_matlab.a libtool: install: /usr/bin/install -c .libs/NodeConnectivity_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/NodeConnectivity_matlab.a libtool: install: /usr/bin/install -c .libs/PointCloudFindNeighbors_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PointCloudFindNeighbors_matlab.a libtool: install: /usr/bin/install -c .libs/ProcessRifts_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/ProcessRifts_matlab.a libtool: install: /usr/bin/install -c .libs/PropagateFlagsFromConnectivity_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/PropagateFlagsFromConnectivity_matlab.a libtool: install: /usr/bin/install -c .libs/Scotch_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Scotch_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Scotch_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Scotch_matlab.a libtool: install: /usr/bin/install -c .libs/Triangle_matlab.a /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.a libtool: install: chmod 644 /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.a libtool: install: ranlib /home/jenkins/workspace/Debian_Linux-CoDiPack/lib/Triangle_matlab.a libtool: finish: PATH="/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/petsc/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/cmake/install/bin:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/autotools/install/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/home/jenkins/workspace/Debian_Linux-CoDiPack/aux-config:/home/jenkins/workspace/Debian_Linux-CoDiPack/scripts:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/dyson/:/home/jenkins/workspace/Debian_Linux-CoDiPack/externalpackages/shell2junit/install:/sbin" ldconfig -n /home/jenkins/workspace/Debian_Linux-CoDiPack/lib ---------------------------------------------------------------------- Libraries have been installed in: /home/jenkins/workspace/Debian_Linux-CoDiPack/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the '-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the 'LD_RUN_PATH' environment variable during linking - use the '-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to '/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers/matlab' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[4]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src/wrappers' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[3]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack/src' make[1]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[2]: Entering directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' make[1]: Leaving directory '/home/jenkins/workspace/Debian_Linux-CoDiPack' +++ Removing old junit reports from: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog/results +++ Running case: MATLAB-3015 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero boundary conditions for stressbalance model: spc set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3015 (line 56) md=solve(md,'Masstransport'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3015 test name: SquareShelfConstrainedMasstransp2dAdolcForwardDifference field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3015 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero boundary conditions for stressbalance model: spc set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3015 (line 56) md=solve(md,'Masstransport'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3015 test name: SquareShelfConstrainedMasstransp2dAdolcForwardDifference field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3119 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3119 (line 18) md=solve(md,'Transient'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3119 test name: ReverseScalarDriver field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3119 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3119 (line 18) md=solve(md,'Transient'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3119 test name: ReverseScalarDriver field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3201 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3201 (line 26) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3201 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3201 (line 26) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3202 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3202 (line 26) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3202 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3202 (line 26) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3203 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3203 (line 36) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3203 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3203 (line 36) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3204 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3204 (line 28) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3204 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3204 (line 28) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3205 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3205 (line 28) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3205 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3205 (line 28) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3206 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3206 (line 36) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3206 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3206 (line 36) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: N/A +++ exit code: 0 +++ error: 1 +++ Running case: MATLAB-3480 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero INFO: the outlog will look better if only md.verbose.control is turned on model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3480 (line 57) md=solve(md,'transient'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3480 test name: SquareShelfAdolcStaticControls field: N/A +++ exit code: 0 +++ error: 0 +++ Running case: MATLAB-3480 +++ working dir: /home/jenkins/workspace/Debian_Linux-CoDiPack/nightlylog boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero INFO: the outlog will look better if only md.verbose.control is turned on model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3480 (line 57) md=solve(md,'transient'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3480 test name: SquareShelfAdolcStaticControls field: N/A +++ exit code: 0 +++ error: 1 ----------MATLAB exited in error!---------- < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 8 (23.2.0.2599560) 64-bit (glnxa64) April 29, 2024 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded ----------------starting:3015----------------------- boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero boundary conditions for stressbalance model: spc set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3015 (line 56) md=solve(md,'Masstransport'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3015 test name: SquareShelfConstrainedMasstransp2dAdolcForwardDifference field: N/A ----------------finished:3015----------------------- ----------------starting:3119----------------------- boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3119 (line 18) md=solve(md,'Transient'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run1 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',1,'numprocs',2);FAILURE difference: N/A test id: 3119 test name: ReverseScalarDriver field: N/A ----------------finished:3119----------------------- MATLABEXITEDCORRECTLY < M A T L A B (R) > Copyright 1984-2023 The MathWorks, Inc. R2023b Update 8 (23.2.0.2599560) 64-bit (glnxa64) April 29, 2024 To get started, type doc. For product information, visit www.mathworks.com. ISSM development path correctly loaded ----------------starting:3201----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3201 (line 26) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3201 test name: SquareShelfTransientCalibrationNBEcodipack field: N/A ----------------finished:3201----------------------- ----------------starting:3202----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3202 (line 26) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3202 test name: SquareShelfTransientCalibrationNBVcodipack field: N/A ----------------finished:3202----------------------- ----------------starting:3203----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3203 (line 36) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3203 test name: SquareShelfTransientLevelsetMisfitcodipack field: N/A ----------------finished:3203----------------------- ----------------starting:3204----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3204 (line 28) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3204 test name: SquareShelfTransientCalibrationNBEcodipackCheckpoint field: N/A ----------------finished:3204----------------------- ----------------starting:3205----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3205 (line 28) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3205 test name: SquareShelfTransientCalibrationNBVcodipackCheckpoint field: N/A ----------------finished:3205----------------------- ----------------starting:3206----------------------- boundary conditions for stressbalance model: spc set as zero no smb.mass_balance specified: values set as zero no basalforcings.groundedice_melting_rate specified: values set as zero no basalforcings.floatingice_melting_rate specified: values set as zero no balancethickness.thickening_rate specified: values set as zero model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3206 (line 36) md = solve(md,'tr'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3206 test name: SquareShelfTransientCalibrationWithParamcodipack field: N/A ----------------finished:3206----------------------- ----------------starting:3480----------------------- boundary conditions for stressbalance model: spc set as zero no balancethickness.thickening_rate specified: values set as zero INFO: the outlog will look better if only md.verbose.control is turned on model not consistent: field 'mmemasstransport' is not an object Error using ismodelselfconsistent Model not consistent, see messages above Error in solve (line 100) ismodelselfconsistent(md), Error in test3480 (line 57) md=solve(md,'transient'); Error in run (line 99) evalin('caller', strcat(script, ';')); Error in runme (line 156) run(['test' num2str(id)]); Error in matlab_run2 (line 3) runme('benchmark','all','id',[3015,3119,3480,3201:3206],'output','nightly','rank',2,'numprocs',2);FAILURE difference: N/A test id: 3480 test name: SquareShelfAdolcStaticControls field: N/A ----------------finished:3480----------------------- MATLABEXITEDCORRECTLY -----------End of matlab_log.log----------- Build step 'Execute shell' marked build as failure Recording test results Finished: FAILURE