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#84 (Jun 20, 2026, 4:22:00 AM)

CHG: interpISMIP7AntarcticaOcn.m - Fix to check time boundary and update parameters for ISMP7.

inwoo0415 at 4:33 AM 6/13/26

CHG: interpISMIP7AntarcticaSMB.m - Use anomaly values for SMB and reference SMB from RACMO24p1 dataset.

inwoo0415 at 11:12 PM 6/13/26

BUG: Fix bug in interpISMIP7AntarcticaOcn.m.

inwoo0415 at 12:38 AM 6/14/26

CHG: new way of computing RMSEs for nudging

mathieu.morlighem at 10:58 AM 6/18/26

CHG: do we REALLY need VxObsEnum? trying to use InversionVxObs instead, it makes more sense to reuse existing Enums if possible

mathieu.morlighem at 10:58 AM 6/18/26

Update basalforcingsismip6.m to fix wrong default value for 'islocal'

noreply at 7:02 AM 6/19/26

CHG: trying to fix nudging class (needs to pull out fields from md.inversion

Mathieu Morlighem at 7:55 AM 6/19/26

#83 (Jun 13, 2026, 4:22:00 AM)

CHG: clean up comment in GEMB accumulation

95945328+NJSchlegel at 6:24 PM 5/21/26

CHG: fixed dimension problem in nudging scheme

mathieu.morlighem at 4:06 PM 6/6/26

NEW: added GetVectorFromInputsx and UpdateInputFromVector with Lid so that we can do this locally

mathieu.morlighem at 2:29 PM 6/7/26

CHG: minor estaetics

mathieu.morlighem at 2:33 PM 6/7/26

CHG: GEMB read mapping neighbors as double array

95945328+NJSchlegel at 9:17 AM 6/8/26

CHG: added warning when control exceeds parameter_min/max and gradient is 0

mathieu.morlighem at 5:40 PM 6/8/26

CHG: there was a bug when using git difftool (error message complaining about path), this is now fixed

mathieu.morlighem at 3:44 PM 6/9/26

NEW: you can now customize where input files are created using md.settings.stagingpath

mathieu.morlighem at 5:08 AM 6/10/26

mathieu.morlighem at 5:20 AM 6/10/26

Reducing lib flag list so that compiler can find the correct versions on its own.

34657535+TidbitSoftware at 1:10 PM 6/10/26

Reverting lib flags change and rebuilding ext pkgs

34657535+TidbitSoftware at 1:46 PM 6/10/26

NEW: added master flag to not save results in a transient run, needed for nudging

mathieu.morlighem at 6:42 PM 6/11/26

CHG: only save last step

mathieu.morlighem at 6:57 PM 6/11/26

CHG: BasalforcingsPerturbationMeltingRate output is now in m/yr

mathieu.morlighem at 11:25 PM 6/11/26

NEW: added NR test for nudging

mathieu.morlighem at 11:31 PM 6/11/26

CHG: added RMSE's to results as J

mathieu.morlighem at 3:50 PM 6/12/26

#82 (Jun 6, 2026, 4:22:00 AM)

remove duplicate gadi file from cluster dir

justinkinjun.hew at 4:35 PM 6/1/26

NEW: added cost function 701, divergence^2, to improve model initialization

Mathieu Morlighem at 9:56 AM 6/2/26

CHG: when running valgrind make sure that outlog and errlog are in the right directory

Mathieu Morlighem at 10:04 AM 6/2/26

CHG: need to add a few libraries to LD_LIBRARY_PATH in queue script

Mathieu Morlighem at 10:06 AM 6/2/26

CHG: completing first version of nudging code

mathieu.morlighem at 1:22 PM 6/2/26

CHG: outputing friction automatically

mathieu.morlighem at 1:32 PM 6/2/26

BUG: could not run FS with complete adjoint

mathieu.morlighem at 9:49 PM 6/2/26

CHG: keep code in SI (s) only convert to m/yr in RMSE

mathieu.morlighem at 7:25 PM 6/3/26

CHG: added more options for nudging

mathieu.morlighem at 8:02 PM 6/3/26

CHG: added melt to nudging scheme

Mathieu Morlighem at 5:01 AM 6/5/26

CHG: fixing melt nudging

mathieu.morlighem at 5:15 PM 6/5/26

#81 (Jun 1, 2026, 2:16:36 PM)

CHG: streamlining QueueScript so that new clusters don't have a ton of code to write

mathieu.morlighem at 4:06 AM 5/24/26

BUG: restored classes/clusters/cluster_defaults.py

mathieu.morlighem at 4:12 AM 5/24/26

CHG: fixing dakota

mathieu.morlighem at 7:30 AM 5/24/26

CHG: gixing dakota version in python

Mathieu Morlighem at 8:18 AM 5/24/26

CHG: fixing dakota

mathieu.morlighem at 12:28 PM 5/24/26

CHG: crop anything outside the data domain when interpolating dHdt

enigne at 6:28 PM 5/24/26

CHG:add options to data loaders to load from specific nc files

enigne at 10:25 PM 5/24/26

CHG: moved SEMIC from externalpackages to C++ in src/c/shared

mathieu.morlighem at 4:42 AM 5/26/26

CHG: SEMIC is not a required external package anymore

mathieu.morlighem at 7:37 AM 5/26/26

CHG: missing header file to get machine eps

mathieu.morlighem at 7:50 AM 5/26/26

CHG: replaced double by IssmDouble for CoDiPack

mathieu.morlighem at 8:06 AM 5/26/26

BUG: problem recasting IssmDouble to int

Mathieu Morlighem at 9:20 AM 5/26/26

CHG: updating now that semic and m1qn3 are natively in ISSM

Mathieu Morlighem at 10:00 AM 5/26/26

CHG: Now, a unit for TotalHydrologyFlux at grounding line is Gt yr-1.

inwoo0415 at 10:43 PM 5/27/26

BUG: Fix typos....

inwoo0415 at 12:24 AM 5/28/26

CHG: processdata.py - Fix treating element dataset.

inwoo0415 at 1:16 AM 5/28/26

CHG: cmaptools.py - Add functionality to handle LinearSegmentedColormap and string.

inwoo0415 at 10:31 PM 5/31/26

CHG: Fix typos.

inwoo0415 at 10:55 PM 5/31/26

BUG: Fix typos.

inwoo0415 at 10:56 PM 5/31/26

issmversion.py: Fix so docstring is correct and prints version

ken.mankoff at 4:06 AM 6/1/26

export_netCDF.py: Add overwrite keyword

ken.mankoff at 6:44 AM 6/1/26

CHG: shielding seminc from ADOLC

Mathieu Morlighem at 10:11 AM 6/1/26

CHG: moving constant to ifdef

Mathieu Morlighem at 11:28 AM 6/1/26

#79 (May 22, 2026, 6:44:36 PM)

CHG: these classes do not have a port property, replace with 0

Mathieu Morlighem at 5:20 PM 5/18/26

CHG: Synchronize Matlab > Python. Display a warning message if we cannot copy the file.

inwoo0415 at 6:39 PM 5/19/26

CHG: Fix minor.

inwoo0415 at 6:41 PM 5/19/26

Adjusted tolerances

34657535+TidbitSoftware at 7:53 PM 5/19/26

CHG: Fix minor.

inwoo0415 at 11:01 PM 5/19/26

CHG: a lot of code in clusters is repetitive, move Upload/Launch/Download in cluster_defaults to simplify the implementation of new cluster classes

mathieu.morlighem at 5:47 AM 5/20/26

CHG: streamlining all cluster classes with new defaults

mathieu.morlighem at 5:02 AM 5/21/26

NEW: adding inversionnudging for Tim's work

mathieu.morlighem at 9:00 AM 5/21/26

CHG: no need to get min/max parameters when creating new elements

Mathieu Morlighem at 9:19 AM 5/21/26

CHG: we do not need InputUpdateFromIoModel anymore

Mathieu Morlighem at 9:27 AM 5/21/26

CHG: ptol is too high in GEMB

95945328+NJSchlegel at 4:32 PM 5/21/26

CHG: GEMB test removal of P tol in accumulation

95945328+NJSchlegel at 6:02 PM 5/21/26

CHG: working on nudging method

Mathieu Morlighem at 6:13 PM 5/21/26

CHG: streamlining cluster classes

mathieu.morlighem at 4:55 AM 5/22/26

CHG: port number should be an integer, not a string

mathieu.morlighem at 4:57 AM 5/22/26

BUG: fixing CoDiPack by converting PDouble to Double

Mathieu Morlighem at 5:52 AM 5/22/26

CHG: removing LaunchQueueJobIceOcean, we can call the usual LaunchQueueJob

mathieu.morlighem at 6:44 AM 5/22/26

Testing if use of new generic class will suffice for binaries

34657535+TidbitSoftware at 11:08 AM 5/22/26

Removed static version of generic class; adjusted tolerances

34657535+TidbitSoftware at 4:37 PM 5/22/26

Forgot to update Python binaries after removing static generic cluster class

34657535+TidbitSoftware at 4:59 PM 5/22/26

Also needed to clean up import and check on static generic class in waitonlock

34657535+TidbitSoftware at 5:01 PM 5/22/26

Adjusted tolerances

34657535+TidbitSoftware at 6:35 PM 5/22/26

#77 (May 19, 2026, 11:39:31 AM)

NEW: added clusters/unity.m new unity cluster

mathieu.morlighem at 4:26 PM 5/17/26

NEW: consolidated read_netCDF/write_netCDF should now be more robust:

Mathieu Morlighem at 4:30 PM 5/17/26

CHG: removing extraneous printf

Mathieu Morlighem at 4:33 PM 5/17/26

CHG: removing extraneous printf

Mathieu Morlighem at 4:33 PM 5/17/26

CHG: streamlining generic queueing script

Mathieu Morlighem at 4:34 PM 5/17/26

CHG: moving old code to OLD to avoid confusion

Mathieu Morlighem at 4:44 PM 5/17/26

BUG: divergence.m - 2-D mesh does not require z-coordinate.

inwoo0415 at 7:14 AM 5/18/26

CHG: model is now marshalled in execution, need to take that into account when scp'ing

mansakrishna23 at 1:43 PM 5/18/26

CHG: fixed UploadQueueScript now that all the files are prepared in execution

Mathieu Morlighem at 5:15 PM 5/18/26

BUG: divergence.m - 2-D mesh does not require z-coordinate.

inwoo0415 at 6:21 PM 5/18/26

CHG: model is now marshalled in execution, need to take that into account when scp'ing

inwoo0415 at 6:22 PM 5/18/26

CHG: fixed UploadQueueScript now that all the files are prepared in execution

inwoo0415 at 6:22 PM 5/18/26

CHG: plot_gridded.py - Clean up code and fix bug in getcolormap.

inwoo0415 at 6:30 PM 5/18/26

CHG: get status from copyfile so that MATLAB does not error out, and display a warning instead

mathieu.morlighem at 9:36 AM 5/19/26

#76 (May 16, 2026, 4:22:00 AM)

CHG: excluding test703 again because it uses bamg

Mathieu Morlighem at 9:38 AM 5/11/26

NEW: now create files directly in execution/ instead of current directory to avoid clutter and overwrites

mathieu.morlighem at 1:03 PM 5/11/26

BUG: issmscpin.py – Fix missing bracketstyle argument in the function call. Also fix the missing path variable when constructing the SCP command.

inwoo0415 at 7:23 PM 5/11/26

BUG: issmscpin.py – Fix missing bracketstyle argument in the function call. Also fix the missing path variable when constructing the SCP command.

inwoo0415 at 8:35 PM 5/11/26

BUG: handle case when executionpath is not /Users/mmorligh/Desktop/ISSM/execution

mathieu.morlighem at 4:56 AM 5/12/26

CHG: better way to handle local vs remote execution

mathieu.morlighem at 7:02 AM 5/12/26

CHG: trying to fix windows with the new format of execution/input files

mathieu.morlighem at 7:27 AM 5/12/26

CHG: fixing windows

mathieu.morlighem at 10:20 AM 5/12/26

m1qn3 is now integrated

34657535+TidbitSoftware at 1:31 PM 5/12/26

Removing m1qn3 fence; formatting

34657535+TidbitSoftware at 4:03 PM 5/12/26

m1qn3 is now integrated

34657535+TidbitSoftware at 5:00 PM 5/12/26

CHG: in some cases the new m1qn3 would fail with exit code 7, this should now be fixed

mathieu.morlighem at 4:45 AM 5/13/26

CHG: minor update

mathieu.morlighem at 4:46 AM 5/13/26

CHG: trying to fix dakota now that files are explicitly in execution

mathieu.morlighem at 5:41 AM 5/13/26

NEW:preparing a GNN based stressbalance emulator

55120383+yinmin-liu at 9:39 AM 5/13/26

frontera, andes settings

mansakrishna23 at 12:59 PM 5/13/26

CHG: use Dakota's output manager to figure out where to read and write files

mathieu.morlighem at 4:36 AM 5/14/26

CHG: added check to warn users when execution dir needs to be cleaned up

mathieu.morlighem at 4:56 AM 5/14/26

BUG: adding default pertubration melt for spatial linear

mansakrishna23 at 12:39 PM 5/14/26

CHG: make sure to save outlog and errlog in execution directory if launched from another directory (no more cd)

mansakrishna23 at 12:40 PM 5/14/26

Delete src/m/andes_settings.m

noreply at 1:24 PM 5/14/26

Delete src/m/frontera_settings.m

noreply at 1:24 PM 5/14/26

Restore MATLAB export_netCDF.m

noreply at 5:16 PM 5/14/26

CHG: eliminating m1qn3 from Github's CI

mathieu.morlighem at 9:53 AM 5/15/26

CHG: now call MAR-IA once per processor instead of per element

55120383+yinmin-liu at 10:51 AM 5/15/26