macOS - Silicon - Binaries - Python 3 #106 Changes

ADD: a test for the friction emulator and a started the 5000 series of test for future ML models

test/Data/friction_emulator/model_sqrt_weighted_standard.pt test/Archives/Archive5001.arch test/Data/friction_emulator/friction_emulator.py test/NightlyRun/test5001.m

tom.yinmin.liu at 8:43 AM 9/14/26

CHG:relax test5001 tolerances

c4995ab

test/NightlyRun/test5001.m

tom.yinmin.liu at 12:39 PM 9/14/26

BUG:Exclude test5001 from Linux and macOS MATLAB binaries tests

da5346c

packagers/mac/complete-issm-mac-silicon-binaries-matlab.sh packagers/mac/complete-issm-mac-intel-binaries-matlab.sh packagers/linux/complete-issm-linux-binaries-matlab.sh packagers/mac/test-issm-mac-binaries-matlab.sh

tom.yinmin.liu at 4:05 PM 9/14/26

CHG: Strongly recommended to use the “.nc” extension when writing or reading NetCDF files. Without the extension, the file name can easily be confused with “.mat” files, which may lead to unexpected behavior or misinterpretation. (#183)

30a4c94

src/m/netcdf/write_netCDF.m src/m/netcdf/read_netCDF.m src/m/netcdf/write_netCDF.py src/m/netcdf/read_netCDF.py

noreply at 12:04 AM 9/15/26

BUG: Fix typo.

41c918c

src/m/netcdf/read_netCDF.py

inwoopark0415 at 12:49 AM 9/15/26

CHG: Coerce elements to integer when reading netcd file.

69c1507

src/m/netcdf/read_netCDF.py src/m/netcdf/read_netCDF.m

inwoopark0415 at 1:31 AM 9/15/26

CHG: Synchronize Matlab > Python in plotmodel and fix issue in "pairoptions" function. (#184)

6d6cbff

src/m/classes/plotoptions.py src/m/plot/plot_unit.py src/m/plot/applyoptions.py src/m/classes/pairoptions.py src/m/plot/plotmodel.py

noreply at 1:42 AM 9/15/26

CHG: Updating mirror for Autotools packages; formatting

0f932b7

jenkins/jenkins.sh externalpackages/autotools/install-linux.sh externalpackages/autotools/install-mac.sh

34657535+TidbitSoftware at 10:39 AM 9/15/26

NEW: starting new calving law implementation with Doug's Stochastic function

438001a

src/c/shared/Enum/Enum.vim src/c/shared/Enum/EnumDefinitions.h src/c/shared/Enum/Enumjl.vim src/c/shared/Enum/StringToEnumx.cpp src/m/classes/calvingstochastic.m src/c/shared/Enum/issmenums.jl src/c/shared/Enum/EnumToStringx.cpp src/c/shared/io/Marshalling/IoCodeConversions.cpp

mathieu.morlighem at 10:50 AM 9/15/26

CHG: cosmetics

d229aac

src/m/classes/friction.m

mathieu.morlighem at 10:50 AM 9/15/26

CHG: Updating CMake version

edfbe31

externalpackages/cmake/install.sh

34657535+TidbitSoftware at 1:10 PM 9/15/26

CHG: Updating all nightlies to PETSc 3.25 as earlier versions do not play nicely with CMake 4

41cf8f7

jenkins/mac-intel-basic externalpackages/petsc/install-3.25-linux-static.sh jenkins/mac-silicon-binaries-python-3 jenkins/mac-silicon-dakota jenkins/ross-debian_linux-solid_earth externalpackages/petsc/install-3.25-win-msys2-mingw-msmpi.sh jenkins/mac-silicon-solid_earth jenkins/ross-debian_linux-binaries-matlab jenkins/mac-silicon-python jenkins/mac-intel-full jenkins/ross-debian_linux-python jenkins/ross-debian_linux-full-mplapack jenkins/ross-debian_linux-full-valgrind jenkins/mac-intel-examples jenkins/ross-debian_linux-codipack externalpackages/petsc/install-3.25-win-msys2-mingw-msmpi-static.sh externalpackages/petsc/install-3.25-mac-static.sh jenkins/mac-intel-binaries-python-3 jenkins/mac-intel-solid_earth jenkins/ross-debian_linux-full jenkins/mac-intel-dakota jenkins/ross-debian_linux-adolc-ampioff jenkins/mac-silicon-full jenkins/mac-intel-binaries-matlab jenkins/ross-debian_linux-adolc-ampion jenkins/ross-debian_linux-dakota jenkins/mac-silicon-binaries-matlab jenkins/ross-debian_linux-binaries-python-3 jenkins/mac-silicon-examples jenkins/ross-debian_linux-iceocean externalpackages/petsc/install-3.25-mac.sh jenkins/mac-silicon-basic jenkins/ross-debian_linux-basic

34657535+TidbitSoftware at 10:07 AM 9/16/26

CHG: Reverting to 3.31.12 as there is still an issue with Dakota 6.2 and CMake > 3 and I don't have time to fix it right now

8885cb0

externalpackages/cmake/install.sh

34657535+TidbitSoftware at 3:30 PM 9/16/26

NEW: working on calving stochastic

e314d5f

src/c/analyses/LevelsetAnalysis.cpp src/c/shared/Enum/Enum.vim src/c/classes/Elements/Tria.cpp src/c/modules/Calvingx/Calvingx.cpp src/c/shared/Enum/EnumDefinitions.h src/c/shared/Enum/EnumToStringx.cpp src/c/shared/Enum/StringToEnumx.cpp src/c/modules/Calvingx/Calvingx.h src/c/shared/Enum/Enumjl.vim src/c/shared/Enum/issmenums.jl src/m/classes/calvingstochastic.m

Mathieu Morlighem at 7:34 AM 9/17/26

CHG: fixing calving law that requires effective strain rate

53310eb

src/c/classes/Elements/Tria.cpp

Mathieu Morlighem at 7:58 AM 9/17/26

CHG: finished calving propagation through connectivity

277d901

src/c/analyses/LevelsetAnalysis.cpp

Mathieu Morlighem at 8:25 AM 9/17/26

CHG: replaced d by chi

f47c56a

src/c/modules/Calvingx/Calvingx.cpp

Mathieu Morlighem at 8:30 AM 9/17/26

CHG: Do not treat free-form Fortran line length warning as an error.

1a32188

externalpackages/petsc/install-3.25-linux-static.sh externalpackages/petsc/install-3.25-mac-static.sh

34657535+TidbitSoftware at 5:57 PM 9/17/26

CHG: Adjusted tolerances

ba2b39e

test/NightlyRun/test340.m test/NightlyRun/test340.py

34657535+TidbitSoftware at 7:25 PM 9/17/26

CHG: Coerce the element array to int64.

236aa0f

src/m/netcdf/read_netCDF.m src/m/netcdf/read_netCDF.py

inwoo0415 at 10:07 PM 9/17/26

NEW: added interpMIPkitGreenland.m to easily interpolate data from MIPkit Greenland onto mesh

a3dea9d

src/m/modeldata/interpMIPkitGreenland.m

Mathieu Morlighem at 10:19 AM 9/18/26