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Started by GitHub push by MathieuMorlighem Started by GitHub push by MathieuMorlighem Running as SYSTEM Building remotely on macOS-Silicon (mac) in workspace /Users/jenkins/workspace/macOS-Silicon-Examples The recommended git tool is: NONE using credential 3c85c82b-fb35-4fea-b703-0aa4f155f9c7 > git rev-parse --resolve-git-dir /Users/jenkins/workspace/macOS-Silicon-Examples/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url git@github.com:ISSMteam/ISSM.git # timeout=10 Fetching upstream changes from git@github.com:ISSMteam/ISSM.git > git --version # timeout=10 > git --version # 'git version 2.39.3 (Apple Git-146)' using GIT_SSH to set credentials GitHub Deploy Key - ISSMteam/ISSM - Jenkins Verifying host key using known hosts file > git fetch --tags --force --progress -- git@github.com:ISSMteam/ISSM.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/main^{commit} # timeout=10 Checking out Revision 13ff1be188e40fa6fce1dcba6e9147c419560d8d (refs/remotes/origin/main) > git config core.sparsecheckout # timeout=10 > git checkout -f 13ff1be188e40fa6fce1dcba6e9147c419560d8d # timeout=10 Commit message: "BUG: bad python syntax" > git rev-list --no-walk 27d598e09ce4f16c07c7419dc0aeae120cddf154 # timeout=10 [macOS-Silicon-Examples] $ /bin/bash /var/folders/mx/mr9ch0gx2qq_tty2dtgrjcn40000gp/T/jenkins6674265857663754180.sh Cleaning up execution directory ====================================================== Determining installation type ====================================================== List of changed files --------------------- src/m/classes/stressbalance.py src/wrappers/python/Makefile.am -- checking for changed externalpackages... no -- checking for reconfiguration... yes -- checking for recompilation... yes ====================================================== Skipping autotools ====================================================== ====================================================== Skipping cmake ====================================================== ====================================================== Skipping petsc ====================================================== ====================================================== Skipping gsl ====================================================== ====================================================== Skipping boost ====================================================== ====================================================== Skipping dakota ====================================================== ====================================================== Skipping chaco ====================================================== ====================================================== Skipping curl ====================================================== ====================================================== Skipping hdf5 ====================================================== ====================================================== Skipping netcdf ====================================================== ====================================================== Skipping proj ====================================================== ====================================================== Skipping gdal ====================================================== ====================================================== Skipping gshhg ====================================================== ====================================================== Skipping gmt ====================================================== ====================================================== Skipping gmsh ====================================================== ====================================================== Skipping triangle ====================================================== ====================================================== Skipping m1qn3 ====================================================== ====================================================== Skipping semic ====================================================== ====================================================== Skipping shell2junit ====================================================== ====================================================== Cleaning up and reconfiguring ====================================================== Making uninstall in src Making uninstall in c ( cd '/Users/jenkins/workspace/macOS-Silicon-Examples/bin' && rm -f issm.exe issm_slc.exe kriging.exe issm_dakota.exe issm_post.exe ) /bin/sh ../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMCore.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMCore.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMCore.dylib /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMCore.dylib /bin/sh ../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMOverload.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMOverload.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMOverload.dylib /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMOverload.dylib /bin/sh ../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMModules.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMModules.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMModules.dylib /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMModules.dylib Making uninstall in m Making uninstall in wrappers Making uninstall in matlab /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMMatlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMMatlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMMatlab.dylib /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMMatlab.dylib /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMApi.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMApi.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMApi.dylib /Users/jenkins/workspace/macOS-Silicon-Examples/lib/libISSMApi.dylib /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgConvertMesh_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgConvertMesh_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgConvertMesh_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgConvertMesh_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgMesher_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgMesher_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgMesher_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgMesher_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgTriangulate_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgTriangulate_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgTriangulate_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/BamgTriangulate_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/ContourToMesh_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ContourToMesh_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ContourToMesh_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ContourToMesh_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/ContourToNodes_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ContourToNodes_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ContourToNodes_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ContourToNodes_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/DistanceToMaskBoundary_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/DistanceToMaskBoundary_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/DistanceToMaskBoundary_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/DistanceToMaskBoundary_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/ElementConnectivity_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ElementConnectivity_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ElementConnectivity_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ElementConnectivity_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/ExpSimplify_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ExpSimplify_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ExpSimplify_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ExpSimplify_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/ExpToLevelSet_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ExpToLevelSet_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ExpToLevelSet_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ExpToLevelSet_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromGridToMesh_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromGridToMesh_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromGridToMesh_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromGridToMesh_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMesh2d_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMesh2d_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMesh2d_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMesh2d_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToGrid_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToGrid_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToGrid_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToGrid_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToMesh2d_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToMesh2d_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToMesh2d_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToMesh2d_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToMesh3d_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToMesh3d_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToMesh3d_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/InterpFromMeshToMesh3d_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/IssmConfig_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/IssmConfig_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/IssmConfig_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/IssmConfig_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/M1qn3_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/M1qn3_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/M1qn3_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/M1qn3_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/MeshPartition_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/MeshPartition_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/MeshPartition_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/MeshPartition_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/MeshProfileIntersection_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/MeshProfileIntersection_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/MeshProfileIntersection_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/MeshProfileIntersection_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/NodeConnectivity_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/NodeConnectivity_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/NodeConnectivity_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/NodeConnectivity_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/PointCloudFindNeighbors_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/PointCloudFindNeighbors_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/PointCloudFindNeighbors_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/PointCloudFindNeighbors_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/ProcessRifts_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ProcessRifts_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ProcessRifts_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/ProcessRifts_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/PropagateFlagsFromConnectivity_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/PropagateFlagsFromConnectivity_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/PropagateFlagsFromConnectivity_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/PropagateFlagsFromConnectivity_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/Scotch_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Scotch_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Scotch_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Scotch_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/Triangle_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Triangle_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Triangle_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Triangle_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/Chaco_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Chaco_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Chaco_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Chaco_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/Kriging_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Kriging_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Kriging_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/Kriging_matlab.mexmaca64 /bin/sh ../../../libtool --mode=uninstall rm -f '/Users/jenkins/workspace/macOS-Silicon-Examples/lib/CoordTransform_matlab.la' libtool: uninstall: rm -f /Users/jenkins/workspace/macOS-Silicon-Examples/lib/CoordTransform_matlab.la /Users/jenkins/workspace/macOS-Silicon-Examples/lib/CoordTransform_matlab.mexmaca64 /Users/jenkins/workspace/macOS-Silicon-Examples/lib/CoordTransform_matlab.mexmaca64 make[3]: Nothing to be done for `uninstall-am'. make[2]: Nothing to be done for `uninstall-am'. make[1]: Nothing to be done for `uninstall-am'. Making distclean in src Making distclean in c rm -f issm.exe issm_slc.exe kriging.exe issm_dakota.exe issm_post.exe rm -f issm issm_slc kriging issm_dakota issm_post test -z "libISSMCore.la libISSMOverload.la libISSMModules.la" || rm -f libISSMCore.la libISSMOverload.la libISSMModules.la rm -f ./so_locations rm -rf .libs _libs rm -rf ./analyses/.libs ./analyses/_libs rm -rf ./bamg/.libs ./bamg/_libs rm -rf ./classes/.libs ./classes/_libs rm -rf ./classes/Constraints/.libs ./classes/Constraints/_libs rm -rf ./classes/Dakota/.libs ./classes/Dakota/_libs rm -rf ./classes/Elements/.libs ./classes/Elements/_libs rm -rf ./classes/ExternalResults/.libs ./classes/ExternalResults/_libs rm -rf ./classes/Inputs/.libs ./classes/Inputs/_libs rm -rf ./classes/Loads/.libs ./classes/Loads/_libs rm -rf ./classes/Materials/.libs ./classes/Materials/_libs rm -rf ./classes/Options/.libs ./classes/Options/_libs rm -rf ./classes/Params/.libs ./classes/Params/_libs rm -rf ./classes/gauss/.libs ./classes/gauss/_libs rm -rf ./classes/kriging/.libs ./classes/kriging/_libs rm -rf ./classes/matrix/.libs ./classes/matrix/_libs rm -rf ./cores/.libs ./cores/_libs rm -rf ./datastructures/.libs ./datastructures/_libs rm -rf ./kml/.libs ./kml/_libs rm -rf ./main/.libs ./main/_libs rm -rf ./modules/AllocateSystemMatricesx/.libs ./modules/AllocateSystemMatricesx/_libs rm -rf ./modules/AverageOntoPartitionx/.libs ./modules/AverageOntoPartitionx/_libs rm -rf ./modules/BamgConvertMeshx/.libs ./modules/BamgConvertMeshx/_libs rm -rf ./modules/BamgTriangulatex/.libs ./modules/BamgTriangulatex/_libs rm -rf ./modules/Bamgx/.libs ./modules/Bamgx/_libs rm -rf ./modules/Calvingx/.libs ./modules/Calvingx/_libs rm -rf ./modules/Chacox/.libs ./modules/Chacox/_libs rm -rf ./modules/ConfigureObjectsx/.libs ./modules/ConfigureObjectsx/_libs rm -rf ./modules/ConstraintsStatex/.libs ./modules/ConstraintsStatex/_libs rm -rf ./modules/ContourToMeshx/.libs ./modules/ContourToMeshx/_libs rm -rf ./modules/ContourToNodesx/.libs ./modules/ContourToNodesx/_libs rm -rf ./modules/ControlInputSetGradientx/.libs ./modules/ControlInputSetGradientx/_libs rm -rf ./modules/CoordinateSystemTransformx/.libs ./modules/CoordinateSystemTransformx/_libs rm -rf ./modules/CreateJacobianMatrixx/.libs ./modules/CreateJacobianMatrixx/_libs rm -rf ./modules/CreateNodalConstraintsx/.libs ./modules/CreateNodalConstraintsx/_libs rm -rf ./modules/Damagex/.libs ./modules/Damagex/_libs rm -rf ./modules/DistanceToMaskBoundaryx/.libs ./modules/DistanceToMaskBoundaryx/_libs rm -rf ./modules/DragCoefficientAbsGradientx/.libs ./modules/DragCoefficientAbsGradientx/_libs rm -rf ./modules/ElementConnectivityx/.libs ./modules/ElementConnectivityx/_libs rm -rf ./modules/ElementCoordinatesx/.libs ./modules/ElementCoordinatesx/_libs rm -rf ./modules/Exp2Kmlx/.libs ./modules/Exp2Kmlx/_libs rm -rf ./modules/ExpToLevelSetx/.libs ./modules/ExpToLevelSetx/_libs rm -rf ./modules/FloatingiceMeltingRatePicox/.libs ./modules/FloatingiceMeltingRatePicox/_libs rm -rf ./modules/FloatingiceMeltingRatex/.libs ./modules/FloatingiceMeltingRatex/_libs rm -rf ./modules/FrontalForcingsx/.libs ./modules/FrontalForcingsx/_libs rm -rf ./modules/GeothermalFluxx/.libs ./modules/GeothermalFluxx/_libs rm -rf ./modules/GetSolutionFromInputsx/.libs ./modules/GetSolutionFromInputsx/_libs rm -rf ./modules/GetVectorFromControlInputsx/.libs ./modules/GetVectorFromControlInputsx/_libs rm -rf ./modules/GetVectorFromInputsx/.libs ./modules/GetVectorFromInputsx/_libs rm -rf ./modules/GiaDeflectionCorex/.libs ./modules/GiaDeflectionCorex/_libs rm -rf ./modules/Gradjx/.libs ./modules/Gradjx/_libs rm -rf ./modules/GroundinglineMigrationx/.libs ./modules/GroundinglineMigrationx/_libs rm -rf ./modules/InputDepthAverageAtBasex/.libs ./modules/InputDepthAverageAtBasex/_libs rm -rf ./modules/InputDuplicatex/.libs ./modules/InputDuplicatex/_libs rm -rf ./modules/InputExtrudex/.libs ./modules/InputExtrudex/_libs rm -rf ./modules/InputUpdateFromConstantx/.libs ./modules/InputUpdateFromConstantx/_libs rm -rf ./modules/InputUpdateFromDakotax/.libs ./modules/InputUpdateFromDakotax/_libs rm -rf ./modules/InputUpdateFromMatrixDakotax/.libs ./modules/InputUpdateFromMatrixDakotax/_libs rm -rf ./modules/InputUpdateFromSolutionx/.libs ./modules/InputUpdateFromSolutionx/_libs rm -rf ./modules/InputUpdateFromVectorDakotax/.libs ./modules/InputUpdateFromVectorDakotax/_libs rm -rf ./modules/InputUpdateFromVectorx/.libs ./modules/InputUpdateFromVectorx/_libs rm -rf ./modules/InterpFromGridToMeshx/.libs ./modules/InterpFromGridToMeshx/_libs rm -rf ./modules/InterpFromMesh2dx/.libs ./modules/InterpFromMesh2dx/_libs rm -rf ./modules/InterpFromMeshToGridx/.libs ./modules/InterpFromMeshToGridx/_libs rm -rf ./modules/InterpFromMeshToMesh2dx/.libs ./modules/InterpFromMeshToMesh2dx/_libs rm -rf ./modules/InterpFromMeshToMesh3dx/.libs ./modules/InterpFromMeshToMesh3dx/_libs rm -rf ./modules/IoModelToConstraintsx/.libs ./modules/IoModelToConstraintsx/_libs rm -rf ./modules/KMLFileReadx/.libs ./modules/KMLFileReadx/_libs rm -rf ./modules/KMLMeshWritex/.libs ./modules/KMLMeshWritex/_libs rm -rf ./modules/KMLOverlayx/.libs ./modules/KMLOverlayx/_libs rm -rf ./modules/KillIcebergsx/.libs ./modules/KillIcebergsx/_libs rm -rf ./modules/Kml2Expx/.libs ./modules/Kml2Expx/_libs rm -rf ./modules/Krigingx/.libs ./modules/Krigingx/_libs rm -rf ./modules/Mergesolutionfromftogx/.libs ./modules/Mergesolutionfromftogx/_libs rm -rf ./modules/MeshPartitionx/.libs ./modules/MeshPartitionx/_libs rm -rf ./modules/MeshProfileIntersectionx/.libs ./modules/MeshProfileIntersectionx/_libs rm -rf ./modules/MmeToInputFromIdx/.libs ./modules/MmeToInputFromIdx/_libs rm -rf ./modules/ModelProcessorx/.libs ./modules/ModelProcessorx/_libs rm -rf ./modules/ModelProcessorx/Autodiff/.libs ./modules/ModelProcessorx/Autodiff/_libs rm -rf ./modules/ModelProcessorx/Control/.libs ./modules/ModelProcessorx/Control/_libs rm -rf ./modules/ModelProcessorx/Dakota/.libs ./modules/ModelProcessorx/Dakota/_libs rm -rf ./modules/ModelProcessorx/Transient/.libs ./modules/ModelProcessorx/Transient/_libs rm -rf ./modules/NodalValuex/.libs ./modules/NodalValuex/_libs rm -rf ./modules/NodeConnectivityx/.libs ./modules/NodeConnectivityx/_libs rm -rf ./modules/NodesDofx/.libs ./modules/NodesDofx/_libs rm -rf ./modules/OceanExchangeDatax/.libs ./modules/OceanExchangeDatax/_libs rm -rf ./modules/OutputDefinitionsResponsex/.libs ./modules/OutputDefinitionsResponsex/_libs rm -rf ./modules/OutputResultsx/.libs ./modules/OutputResultsx/_libs rm -rf ./modules/ParseToolkitsOptionsx/.libs ./modules/ParseToolkitsOptionsx/_libs rm -rf ./modules/PointCloudFindNeighborsx/.libs ./modules/PointCloudFindNeighborsx/_libs rm -rf ./modules/ProcessRiftsx/.libs ./modules/ProcessRiftsx/_libs rm -rf ./modules/PropagateFlagsFromConnectivityx/.libs ./modules/PropagateFlagsFromConnectivityx/_libs rm -rf ./modules/QmuStatisticsx/.libs ./modules/QmuStatisticsx/_libs rm -rf ./modules/Reduceloadx/.libs ./modules/Reduceloadx/_libs rm -rf ./modules/Reducevectorgtofx/.libs ./modules/Reducevectorgtofx/_libs rm -rf ./modules/ResetConstraintsx/.libs ./modules/ResetConstraintsx/_libs rm -rf ./modules/ResetFSBasalBoundaryConditionx/.libs ./modules/ResetFSBasalBoundaryConditionx/_libs rm -rf ./modules/RheologyBAbsGradientx/.libs ./modules/RheologyBAbsGradientx/_libs rm -rf ./modules/RheologyBbarAbsGradientx/.libs ./modules/RheologyBbarAbsGradientx/_libs rm -rf ./modules/Scotchx/.libs ./modules/Scotchx/_libs rm -rf ./modules/SetActiveNodesLSMx/.libs ./modules/SetActiveNodesLSMx/_libs rm -rf ./modules/SetControlInputsFromVectorx/.libs ./modules/SetControlInputsFromVectorx/_libs rm -rf ./modules/Shp2Kmlx/.libs ./modules/Shp2Kmlx/_libs rm -rf ./modules/Solverx/.libs ./modules/Solverx/_libs rm -rf ./modules/SpcNodesx/.libs ./modules/SpcNodesx/_libs rm -rf ./modules/StochasticForcingx/.libs ./modules/StochasticForcingx/_libs rm -rf 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./solutionsequences/.deps/libISSMCore_la-solutionsequence_nonlinear.Plo rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_sampling.Plo rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_schurcg.Plo rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_shakti_nonlinear.Plo rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_stokescoupling_nonlinear.Plo rm -f ./solutionsequences/.deps/libISSMCore_la-solutionsequence_thermal_nonlinear.Plo rm -f ./toolkits/.deps/libISSMCore_la-ToolkitOptions.Plo rm -f ./toolkits/codipack/.deps/libISSMCore_la-CoDiPackGlobal.Plo rm -f ./toolkits/codipack/.deps/libISSMCore_la-ampi_interface.Plo rm -f ./toolkits/gsl/.deps/libISSMCore_la-DenseGslSolve.Plo rm -f ./toolkits/issm/.deps/libISSMCore_la-IssmSolver.Plo rm -f ./toolkits/issm/.deps/libISSMCore_la-IssmToolkitUtils.Plo rm -f ./toolkits/metis/patches/.deps/libISSMCore_la-METIS_PartMeshNodalPatch.Plo rm -f ./toolkits/mpi/.deps/libISSMCore_la-issmmpi.Plo rm -f ./toolkits/mpi/commops/.deps/libISSMCore_la-DetermineGlobalSize.Plo rm -f ./toolkits/mpi/commops/.deps/libISSMCore_la-DetermineLocalSize.Plo rm -f ./toolkits/mpi/commops/.deps/libISSMCore_la-DetermineRowRankFromLocalSize.Plo rm -f ./toolkits/mpi/commops/.deps/libISSMCore_la-GetOwnershipBoundariesFromRange.Plo rm -f ./toolkits/mumps/.deps/libISSMCore_la-MumpsSolve.Plo rm -f ./toolkits/petsc/objects/.deps/libISSMCore_la-PetscMat.Plo rm -f ./toolkits/petsc/objects/.deps/libISSMCore_la-PetscSolver.Plo rm -f ./toolkits/petsc/objects/.deps/libISSMCore_la-PetscVec.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-ISSMToPetscInsertMode.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-ISSMToPetscMatrixType.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-ISSMToPetscNormMode.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-KSPFree.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-MatFree.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-MatMultPatch.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-MatToMPISerial.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-NewMat.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-NewVec.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-PetscOptionsDetermineSolverType.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-VecFree.Plo rm -f ./toolkits/petsc/patches/.deps/libISSMCore_la-VecToMPISerial.Plo rm -f main/.deps/issm-issm.Po rm -f main/.deps/issm_dakota-issm_dakota.Po rm -f main/.deps/issm_ocean-issm_ocean.Po rm -f main/.deps/issm_post-issm_post.Po rm -f main/.deps/issm_slc-issm_slc.Po rm -f main/.deps/kriging-kriging.Po rm -f Makefile Making distclean in m rm -rf .libs _libs rm -f *.lo test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f Makefile Making distclean in wrappers Making distclean in matlab test -z "libISSMMatlab.la libISSMApi.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la M1qn3_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la Chaco_matlab.la Kriging_matlab.la CoordTransform_matlab.la" || rm -f libISSMMatlab.la libISSMApi.la BamgConvertMesh_matlab.la BamgMesher_matlab.la BamgTriangulate_matlab.la ContourToMesh_matlab.la ContourToNodes_matlab.la DistanceToMaskBoundary_matlab.la ElementConnectivity_matlab.la ExpSimplify_matlab.la ExpToLevelSet_matlab.la InterpFromGridToMesh_matlab.la InterpFromMesh2d_matlab.la InterpFromMeshToGrid_matlab.la InterpFromMeshToMesh2d_matlab.la InterpFromMeshToMesh3d_matlab.la IssmConfig_matlab.la M1qn3_matlab.la MeshPartition_matlab.la MeshProfileIntersection_matlab.la NodeConnectivity_matlab.la PointCloudFindNeighbors_matlab.la ProcessRifts_matlab.la PropagateFlagsFromConnectivity_matlab.la Scotch_matlab.la Triangle_matlab.la Chaco_matlab.la Kriging_matlab.la CoordTransform_matlab.la rm -f ./so_locations rm -rf .libs _libs rm -rf ../BamgConvertMesh/.libs ../BamgConvertMesh/_libs rm -rf ../BamgMesher/.libs ../BamgMesher/_libs rm -rf ../BamgTriangulate/.libs ../BamgTriangulate/_libs rm -rf ../Chaco/.libs ../Chaco/_libs rm -rf ../ContourToMesh/.libs ../ContourToMesh/_libs rm -rf ../ContourToNodes/.libs ../ContourToNodes/_libs rm -rf ../CoordTransform/.libs ../CoordTransform/_libs rm -rf ../DistanceToMaskBoundary/.libs ../DistanceToMaskBoundary/_libs rm -rf ../ElementConnectivity/.libs ../ElementConnectivity/_libs rm -rf ../ExpSimplify/.libs ../ExpSimplify/_libs rm -rf ../ExpToLevelSet/.libs ../ExpToLevelSet/_libs rm -rf ../InterpFromGridToMesh/.libs ../InterpFromGridToMesh/_libs rm -rf ../InterpFromMesh2d/.libs ../InterpFromMesh2d/_libs rm -rf ../InterpFromMeshToGrid/.libs ../InterpFromMeshToGrid/_libs rm -rf ../InterpFromMeshToMesh2d/.libs ../InterpFromMeshToMesh2d/_libs rm -rf ../InterpFromMeshToMesh3d/.libs ../InterpFromMeshToMesh3d/_libs rm -rf ../IssmConfig/.libs ../IssmConfig/_libs rm -rf ../Kriging/.libs ../Kriging/_libs rm -rf ../M1qn3/.libs ../M1qn3/_libs rm -rf ../MeshPartition/.libs ../MeshPartition/_libs rm -rf ../MeshProfileIntersection/.libs ../MeshProfileIntersection/_libs rm -rf ../NodeConnectivity/.libs ../NodeConnectivity/_libs rm -rf ../PointCloudFindNeighbors/.libs ../PointCloudFindNeighbors/_libs rm -rf ../ProcessRifts/.libs ../ProcessRifts/_libs rm -rf ../PropagateFlagsFromConnectivity/.libs ../PropagateFlagsFromConnectivity/_libs rm -rf ../Scotch/.libs ../Scotch/_libs rm -rf ../ShpRead/.libs ../ShpRead/_libs rm -rf ../Triangle/.libs ../Triangle/_libs rm -rf ./io/.libs ./io/_libs rm -f *.o rm -f ../BamgConvertMesh/*.o rm -f ../BamgConvertMesh/*.lo rm -f ../BamgMesher/*.o rm -f ../BamgMesher/*.lo rm -f ../BamgTriangulate/*.o rm -f ../BamgTriangulate/*.lo rm -f ../Chaco/*.o rm -f ../Chaco/*.lo rm -f ../ContourToMesh/*.o rm -f ../ContourToMesh/*.lo rm -f ../ContourToNodes/*.o rm -f ../ContourToNodes/*.lo rm -f ../CoordTransform/*.o rm -f ../CoordTransform/*.lo rm -f ../DistanceToMaskBoundary/*.o rm -f ../DistanceToMaskBoundary/*.lo rm -f ../ElementConnectivity/*.o rm -f ../ElementConnectivity/*.lo rm -f ../ExpSimplify/*.o rm -f ../ExpSimplify/*.lo rm -f ../ExpToLevelSet/*.o rm -f ../ExpToLevelSet/*.lo rm -f ../InterpFromGridToMesh/*.o rm -f ../InterpFromGridToMesh/*.lo rm -f ../InterpFromMesh2d/*.o rm -f ../InterpFromMesh2d/*.lo rm -f ../InterpFromMeshToGrid/*.o rm -f ../InterpFromMeshToGrid/*.lo rm -f ../InterpFromMeshToMesh2d/*.o rm -f ../InterpFromMeshToMesh2d/*.lo rm -f ../InterpFromMeshToMesh3d/*.o rm -f ../InterpFromMeshToMesh3d/*.lo rm -f ../IssmConfig/*.o rm -f ../IssmConfig/*.lo rm -f ../Kriging/*.o rm -f ../Kriging/*.lo rm -f ../M1qn3/*.o rm -f ../M1qn3/*.lo rm -f ../MeshPartition/*.o rm -f ../MeshPartition/*.lo rm -f ../MeshProfileIntersection/*.o rm -f ../MeshProfileIntersection/*.lo rm -f ../NodeConnectivity/*.o rm -f ../NodeConnectivity/*.lo rm -f ../PointCloudFindNeighbors/*.o rm -f ../PointCloudFindNeighbors/*.lo rm -f ../ProcessRifts/*.o rm -f ../ProcessRifts/*.lo rm -f ../PropagateFlagsFromConnectivity/*.o rm -f ../PropagateFlagsFromConnectivity/*.lo rm -f ../Scotch/*.o rm -f ../Scotch/*.lo rm -f ../ShpRead/*.o rm -f ../ShpRead/*.lo rm -f ../Triangle/*.o rm -f ../Triangle/*.lo rm -f ./io/*.o rm -f ./io/*.lo rm -f *.lo rm -f *.tab.c test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f ../BamgConvertMesh/.deps/.dirstamp rm -f ../BamgConvertMesh/.dirstamp rm -f ../BamgMesher/.deps/.dirstamp rm -f ../BamgMesher/.dirstamp rm -f ../BamgTriangulate/.deps/.dirstamp rm -f ../BamgTriangulate/.dirstamp rm -f ../Chaco/.deps/.dirstamp rm -f ../Chaco/.dirstamp rm -f ../ContourToMesh/.deps/.dirstamp rm -f ../ContourToMesh/.dirstamp rm -f ../ContourToNodes/.deps/.dirstamp rm -f ../ContourToNodes/.dirstamp rm -f ../CoordTransform/.deps/.dirstamp rm -f ../CoordTransform/.dirstamp rm -f ../DistanceToMaskBoundary/.deps/.dirstamp rm -f ../DistanceToMaskBoundary/.dirstamp rm -f ../ElementConnectivity/.deps/.dirstamp rm -f ../ElementConnectivity/.dirstamp rm -f ../ExpSimplify/.deps/.dirstamp rm -f ../ExpSimplify/.dirstamp rm -f ../ExpToLevelSet/.deps/.dirstamp rm -f ../ExpToLevelSet/.dirstamp rm -f ../InterpFromGridToMesh/.deps/.dirstamp rm -f ../InterpFromGridToMesh/.dirstamp rm -f ../InterpFromMesh2d/.deps/.dirstamp rm -f ../InterpFromMesh2d/.dirstamp rm -f ../InterpFromMeshToGrid/.deps/.dirstamp rm -f ../InterpFromMeshToGrid/.dirstamp rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp rm -f ../InterpFromMeshToMesh2d/.dirstamp rm -f ../InterpFromMeshToMesh3d/.deps/.dirstamp rm -f ../InterpFromMeshToMesh3d/.dirstamp rm -f ../IssmConfig/.deps/.dirstamp rm -f ../IssmConfig/.dirstamp rm -f ../Kriging/.deps/.dirstamp rm -f ../Kriging/.dirstamp rm -f ../M1qn3/.deps/.dirstamp rm -f ../M1qn3/.dirstamp rm -f ../MeshPartition/.deps/.dirstamp rm -f ../MeshPartition/.dirstamp rm -f ../MeshProfileIntersection/.deps/.dirstamp rm -f ../MeshProfileIntersection/.dirstamp rm -f ../NodeConnectivity/.deps/.dirstamp rm -f ../NodeConnectivity/.dirstamp rm -f ../PointCloudFindNeighbors/.deps/.dirstamp rm -f ../PointCloudFindNeighbors/.dirstamp rm -f ../ProcessRifts/.deps/.dirstamp rm -f ../ProcessRifts/.dirstamp rm -f ../PropagateFlagsFromConnectivity/.deps/.dirstamp rm -f ../PropagateFlagsFromConnectivity/.dirstamp rm -f ../Scotch/.deps/.dirstamp rm -f ../Scotch/.dirstamp rm -f ../ShpRead/.deps/.dirstamp rm -f ../ShpRead/.dirstamp rm -f ../Triangle/.deps/.dirstamp rm -f ../Triangle/.dirstamp rm -f io/.deps/.dirstamp rm -f io/.dirstamp rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags rm -f ../BamgConvertMesh/.deps/BamgConvertMesh_matlab_la-BamgConvertMesh.Plo rm -f ../BamgMesher/.deps/BamgMesher_matlab_la-BamgMesher.Plo rm -f ../BamgTriangulate/.deps/BamgTriangulate_matlab_la-BamgTriangulate.Plo rm -f ../Chaco/.deps/Chaco_matlab_la-Chaco.Plo rm -f ../ContourToMesh/.deps/ContourToMesh_matlab_la-ContourToMesh.Plo rm -f ../ContourToNodes/.deps/ContourToNodes_matlab_la-ContourToNodes.Plo rm -f ../CoordTransform/.deps/CoordTransform_matlab_la-CoordTransform.Plo rm -f ../DistanceToMaskBoundary/.deps/DistanceToMaskBoundary_matlab_la-DistanceToMaskBoundary.Plo rm -f ../ElementConnectivity/.deps/ElementConnectivity_matlab_la-ElementConnectivity.Plo rm -f ../ExpSimplify/.deps/ExpSimplify_matlab_la-ExpSimplify.Plo rm -f ../ExpToLevelSet/.deps/ExpToLevelSet_matlab_la-ExpToLevelSet.Plo rm -f ../InterpFromGridToMesh/.deps/InterpFromGridToMesh_matlab_la-InterpFromGridToMesh.Plo rm -f ../InterpFromMesh2d/.deps/InterpFromMesh2d_matlab_la-InterpFromMesh2d.Plo rm -f ../InterpFromMeshToGrid/.deps/InterpFromMeshToGrid_matlab_la-InterpFromMeshToGrid.Plo rm -f ../InterpFromMeshToMesh2d/.deps/InterpFromMeshToMesh2d_matlab_la-InterpFromMeshToMesh2d.Plo rm -f ../InterpFromMeshToMesh3d/.deps/InterpFromMeshToMesh3d_matlab_la-InterpFromMeshToMesh3d.Plo rm -f ../IssmConfig/.deps/IssmConfig_matlab_la-IssmConfig.Plo rm -f ../Kriging/.deps/Kriging_matlab_la-Kriging.Plo rm -f ../M1qn3/.deps/M1qn3_matlab_la-M1qn3.Plo rm -f ../MeshPartition/.deps/MeshPartition_matlab_la-MeshPartition.Plo rm -f ../MeshProfileIntersection/.deps/MeshProfileIntersection_matlab_la-MeshProfileIntersection.Plo rm -f ../NodeConnectivity/.deps/NodeConnectivity_matlab_la-NodeConnectivity.Plo rm -f ../PointCloudFindNeighbors/.deps/PointCloudFindNeighbors_matlab_la-PointCloudFindNeighbors.Plo rm -f ../ProcessRifts/.deps/ProcessRifts_matlab_la-ProcessRifts.Plo rm -f ../PropagateFlagsFromConnectivity/.deps/PropagateFlagsFromConnectivity_matlab_la-PropagateFlagsFromConnectivity.Plo rm -f ../Scotch/.deps/Scotch_matlab_la-Scotch.Plo rm -f ../ShpRead/.deps/ShpRead_matlab_la-ShpRead.Plo rm -f ../Triangle/.deps/Triangle_matlab_la-Triangle.Plo rm -f ./io/.deps/libISSMApi_la-ApiPrintf.Plo rm -f ./io/.deps/libISSMMatlab_la-CheckNumMatlabArguments.Plo rm -f ./io/.deps/libISSMMatlab_la-FetchMatlabData.Plo rm -f ./io/.deps/libISSMMatlab_la-WriteMatlabData.Plo rm -f Makefile Making distclean in javascript rm -f IssmModule.js rm -f IssmModule test -z "libISSMJavascript.la libISSMApi.la" || rm -f libISSMJavascript.la libISSMApi.la rm -f ./so_locations rm -rf .libs _libs rm -rf ./io/.libs ./io/_libs rm -f *.o rm -f ../BamgMesher/*.o rm -f ../ContourToMesh/*.o rm -f ../ElementConnectivity/*.o rm -f ../InterpFromGridToMesh/*.o rm -f ../InterpFromMeshToMesh2d/*.o rm -f ../Issm/*.o rm -f ../IssmConfig/*.o rm -f ../NodeConnectivity/*.o rm -f ../Triangle/*.o rm -f ./io/*.o rm -f ./io/*.lo rm -f *.lo rm -f *.tab.c test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f ../BamgMesher/.deps/.dirstamp rm -f ../BamgMesher/.dirstamp rm -f ../ContourToMesh/.deps/.dirstamp rm -f ../ContourToMesh/.dirstamp rm -f ../ElementConnectivity/.deps/.dirstamp rm -f ../ElementConnectivity/.dirstamp rm -f ../InterpFromGridToMesh/.deps/.dirstamp rm -f ../InterpFromGridToMesh/.dirstamp rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp rm -f ../InterpFromMeshToMesh2d/.dirstamp rm -f ../Issm/.deps/.dirstamp rm -f ../Issm/.dirstamp rm -f ../IssmConfig/.deps/.dirstamp rm -f ../IssmConfig/.dirstamp rm -f ../NodeConnectivity/.deps/.dirstamp rm -f ../NodeConnectivity/.dirstamp rm -f ../Triangle/.deps/.dirstamp rm -f ../Triangle/.dirstamp rm -f io/.deps/.dirstamp rm -f io/.dirstamp rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags rm -f ../BamgMesher/.deps/IssmModule-BamgMesher.Po rm -f ../ContourToMesh/.deps/IssmModule-ContourToMesh.Po rm -f ../ElementConnectivity/.deps/IssmModule-ElementConnectivity.Po rm -f ../InterpFromGridToMesh/.deps/IssmModule-InterpFromGridToMesh.Po rm -f ../InterpFromMeshToMesh2d/.deps/IssmModule-InterpFromMeshToMesh2d.Po rm -f ../Issm/.deps/IssmModule-issm.Po rm -f ../IssmConfig/.deps/IssmModule-IssmConfig.Po rm -f ../NodeConnectivity/.deps/IssmModule-NodeConnectivity.Po rm -f ../Triangle/.deps/IssmModule-Triangle.Po rm -f ./io/.deps/libISSMApi_la-ApiPrintf.Plo rm -f ./io/.deps/libISSMJavascript_la-FetchJavascriptData.Plo rm -f ./io/.deps/libISSMJavascript_la-WriteJavascriptData.Plo rm -f Makefile Making distclean in python cd ../../.. && /bin/sh /Users/jenkins/workspace/macOS-Silicon-Examples/aux-config/missing automake-1.16 --foreign src/wrappers/python/Makefile cd ../../.. && /bin/sh ./config.status src/wrappers/python/Makefile depfiles config.status: creating src/wrappers/python/Makefile config.status: executing depfiles commands test -z "libISSMPython.la libISSMApi.la BamgConvertMesh_python.la BamgMesher_python.la BamgTriangulate_python.la ContourToMesh_python.la ContourToNodes_python.la ElementConnectivity_python.la ExpToLevelSet_python.la InterpFromGridToMesh_python.la InterpFromMesh2d_python.la InterpFromMeshToGrid_python.la InterpFromMeshToMesh2d_python.la InterpFromMeshToMesh3d_python.la IssmConfig_python.la MeshPartition_python.la MeshProfileIntersection_python.la NodeConnectivity_python.la Triangle_python.la ProcessRifts_python.la Chaco_python.la" || rm -f libISSMPython.la libISSMApi.la BamgConvertMesh_python.la BamgMesher_python.la BamgTriangulate_python.la ContourToMesh_python.la ContourToNodes_python.la ElementConnectivity_python.la ExpToLevelSet_python.la InterpFromGridToMesh_python.la InterpFromMesh2d_python.la InterpFromMeshToGrid_python.la InterpFromMeshToMesh2d_python.la InterpFromMeshToMesh3d_python.la IssmConfig_python.la MeshPartition_python.la MeshProfileIntersection_python.la NodeConnectivity_python.la Triangle_python.la ProcessRifts_python.la Chaco_python.la rm -f ./so_locations rm -rf .libs _libs rm -rf ../BamgConvertMesh/.libs ../BamgConvertMesh/_libs rm -rf ../BamgMesher/.libs ../BamgMesher/_libs rm -rf ../BamgTriangulate/.libs ../BamgTriangulate/_libs rm -rf ../Chaco/.libs ../Chaco/_libs rm -rf ../ContourToMesh/.libs ../ContourToMesh/_libs rm -rf ../ContourToNodes/.libs ../ContourToNodes/_libs rm -rf ../ElementConnectivity/.libs ../ElementConnectivity/_libs rm -rf ../ExpToLevelSet/.libs ../ExpToLevelSet/_libs rm -rf ../InterpFromGridToMesh/.libs ../InterpFromGridToMesh/_libs rm -rf ../InterpFromMesh2d/.libs ../InterpFromMesh2d/_libs rm -rf ../InterpFromMeshToGrid/.libs ../InterpFromMeshToGrid/_libs rm -rf ../InterpFromMeshToMesh2d/.libs ../InterpFromMeshToMesh2d/_libs rm -rf ../InterpFromMeshToMesh3d/.libs ../InterpFromMeshToMesh3d/_libs rm -rf ../IssmConfig/.libs ../IssmConfig/_libs rm -rf ../MeshPartition/.libs ../MeshPartition/_libs rm -rf ../MeshProfileIntersection/.libs ../MeshProfileIntersection/_libs rm -rf ../NodeConnectivity/.libs ../NodeConnectivity/_libs rm -rf ../ProcessRifts/.libs ../ProcessRifts/_libs rm -rf ../Triangle/.libs ../Triangle/_libs rm -rf ./io/.libs ./io/_libs rm -f *.o rm -f ../BamgConvertMesh/*.o rm -f ../BamgConvertMesh/*.lo rm -f ../BamgMesher/*.o rm -f ../BamgMesher/*.lo rm -f ../BamgTriangulate/*.o rm -f ../BamgTriangulate/*.lo rm -f ../Chaco/*.o rm -f ../Chaco/*.lo rm -f ../ContourToMesh/*.o rm -f ../ContourToMesh/*.lo rm -f ../ContourToNodes/*.o rm -f ../ContourToNodes/*.lo rm -f ../ElementConnectivity/*.o rm -f ../ElementConnectivity/*.lo rm -f ../ExpToLevelSet/*.o rm -f ../ExpToLevelSet/*.lo rm -f ../InterpFromGridToMesh/*.o rm -f ../InterpFromGridToMesh/*.lo rm -f ../InterpFromMesh2d/*.o rm -f ../InterpFromMesh2d/*.lo rm -f ../InterpFromMeshToGrid/*.o rm -f ../InterpFromMeshToGrid/*.lo rm -f ../InterpFromMeshToMesh2d/*.o rm -f ../InterpFromMeshToMesh2d/*.lo rm -f ../InterpFromMeshToMesh3d/*.o rm -f ../InterpFromMeshToMesh3d/*.lo rm -f ../IssmConfig/*.o rm -f ../IssmConfig/*.lo rm -f ../MeshPartition/*.o rm -f ../MeshPartition/*.lo rm -f ../MeshProfileIntersection/*.o rm -f ../MeshProfileIntersection/*.lo rm -f ../NodeConnectivity/*.o rm -f ../NodeConnectivity/*.lo rm -f ../ProcessRifts/*.o rm -f ../ProcessRifts/*.lo rm -f ../Triangle/*.o rm -f ../Triangle/*.lo rm -f ./io/*.o rm -f ./io/*.lo rm -f *.lo rm -f *.tab.c test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f ../BamgConvertMesh/.deps/.dirstamp rm -f ../BamgConvertMesh/.dirstamp rm -f ../BamgMesher/.deps/.dirstamp rm -f ../BamgMesher/.dirstamp rm -f ../BamgTriangulate/.deps/.dirstamp rm -f ../BamgTriangulate/.dirstamp rm -f ../Chaco/.deps/.dirstamp rm -f ../Chaco/.dirstamp rm -f ../ContourToMesh/.deps/.dirstamp rm -f ../ContourToMesh/.dirstamp rm -f ../ContourToNodes/.deps/.dirstamp rm -f ../ContourToNodes/.dirstamp rm -f ../ElementConnectivity/.deps/.dirstamp rm -f ../ElementConnectivity/.dirstamp rm -f ../ExpToLevelSet/.deps/.dirstamp rm -f ../ExpToLevelSet/.dirstamp rm -f ../InterpFromGridToMesh/.deps/.dirstamp rm -f ../InterpFromGridToMesh/.dirstamp rm -f ../InterpFromMesh2d/.deps/.dirstamp rm -f ../InterpFromMesh2d/.dirstamp rm -f ../InterpFromMeshToGrid/.deps/.dirstamp rm -f ../InterpFromMeshToGrid/.dirstamp rm -f ../InterpFromMeshToMesh2d/.deps/.dirstamp rm -f ../InterpFromMeshToMesh2d/.dirstamp rm -f ../InterpFromMeshToMesh3d/.deps/.dirstamp rm -f ../InterpFromMeshToMesh3d/.dirstamp rm -f ../IssmConfig/.deps/.dirstamp rm -f ../IssmConfig/.dirstamp rm -f ../MeshPartition/.deps/.dirstamp rm -f ../MeshPartition/.dirstamp rm -f ../MeshProfileIntersection/.deps/.dirstamp rm -f ../MeshProfileIntersection/.dirstamp rm -f ../NodeConnectivity/.deps/.dirstamp rm -f ../NodeConnectivity/.dirstamp rm -f ../ProcessRifts/.deps/.dirstamp rm -f ../ProcessRifts/.dirstamp rm -f ../Triangle/.deps/.dirstamp rm -f ../Triangle/.dirstamp rm -f io/.deps/.dirstamp rm -f io/.dirstamp rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags rm -f ../BamgConvertMesh/.deps/BamgConvertMesh_python_la-BamgConvertMesh.Plo rm -f ../BamgMesher/.deps/BamgMesher_python_la-BamgMesher.Plo rm -f ../BamgTriangulate/.deps/BamgTriangulate_python_la-BamgTriangulate.Plo rm -f ../Chaco/.deps/Chaco_python_la-Chaco.Plo rm -f ../ContourToMesh/.deps/ContourToMesh_python_la-ContourToMesh.Plo rm -f ../ContourToNodes/.deps/ContourToNodes_python_la-ContourToNodes.Plo rm -f ../ElementConnectivity/.deps/ElementConnectivity_python_la-ElementConnectivity.Plo rm -f ../ExpToLevelSet/.deps/ExpToLevelSet_python_la-ExpToLevelSet.Plo rm -f ../InterpFromGridToMesh/.deps/InterpFromGridToMesh_python_la-InterpFromGridToMesh.Plo rm -f ../InterpFromMesh2d/.deps/InterpFromMesh2d_python_la-InterpFromMesh2d.Plo rm -f ../InterpFromMeshToGrid/.deps/InterpFromMeshToGrid_python_la-InterpFromMeshToGrid.Plo rm -f ../InterpFromMeshToMesh2d/.deps/InterpFromMeshToMesh2d_python_la-InterpFromMeshToMesh2d.Plo rm -f ../InterpFromMeshToMesh3d/.deps/InterpFromMeshToMesh3d_python_la-InterpFromMeshToMesh3d.Plo rm -f ../IssmConfig/.deps/IssmConfig_python_la-IssmConfig.Plo rm -f ../MeshPartition/.deps/MeshPartition_python_la-MeshPartition.Plo rm -f ../MeshProfileIntersection/.deps/MeshProfileIntersection_python_la-MeshProfileIntersection.Plo rm -f ../NodeConnectivity/.deps/NodeConnectivity_python_la-NodeConnectivity.Plo rm -f ../ProcessRifts/.deps/ProcessRifts_python_la-ProcessRifts.Plo rm -f ../Triangle/.deps/Triangle_python_la-Triangle.Plo rm -f ./io/.deps/libISSMApi_la-ApiPrintf.Plo rm -f ./io/.deps/libISSMPython_la-CheckNumPythonArguments.Plo rm -f ./io/.deps/libISSMPython_la-FetchPythonData.Plo rm -f ./io/.deps/libISSMPython_la-WritePythonData.Plo rm -f Makefile rm -rf .libs _libs rm -f *.lo test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags rm -f Makefile rm -rf .libs _libs rm -f *.lo test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags rm -f Makefile rm -rf .libs _libs rm -f *.lo test -z "" || rm -f test . = "." || test -z "" || rm -f rm -f config.h stamp-h1 rm -f libtool config.lt rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags rm -f cscope.out cscope.in.out cscope.po.out cscope.files rm -f config.status config.cache config.log configure.lineno config.status.lineno rm -f Makefile autoreconf: Entering directory `.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force -I m4 autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, './aux-config'. libtoolize: copying file './aux-config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' autoreconf: running: /Users/jenkins/workspace/macOS-Silicon-Examples/externalpackages/autotools/install/bin/autoconf --force autoreconf: running: /Users/jenkins/workspace/macOS-Silicon-Examples/externalpackages/autotools/install/bin/autoheader --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:17: installing './aux-config/compile' configure.ac:24: installing './aux-config/missing' src/c/Makefile.am: installing './aux-config/depcomp' autoreconf: Leaving directory `.' configure: ============================================================================ configure: = Ice-sheet and Sea-level System Model (ISSM) 4.24 configuration = configure: ============================================================================ checking build system type... arm-apple-darwin23.5.0 checking host system type... arm-apple-darwin23.5.0 checking target system type... arm-apple-darwin23.5.0 checking for icc... no checking for cl... no checking for icl... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out 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(cached) yes checking whether the gfortran linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin23.5.0 dyld checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fno-common checking if gfortran PIC flag -fno-common works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... 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Thu Sep 12 13:04:46 PDT 2024 checking user name... jenkins checking host full OS name and version... darwin23.5.0 checking host cpu... arm checking vendor... apple checking host OS name... darwin23 checking host OS version... 23.5.0 checking host OS architecture... arm64 checking for debugging support... yes checking for development support... yes checking for standalone modules build... no checking for standalone executables build... no checking for standalone libraries build... no checking for wrappers compilation... yes checking operating system type... macOS checking if system copy of libc has fmemopen (macOS-only check)... yes checking for MATLAB... yes checking MATLAB's mex compilation flags... FATAL: command execution failed java.io.EOFException at java.base/java.io.ObjectInputStream$PeekInputStream.readFully(ObjectInputStream.java:2915) at java.base/java.io.ObjectInputStream$BlockDataInputStream.readShort(ObjectInputStream.java:3410) at java.base/java.io.ObjectInputStream.readStreamHeader(ObjectInputStream.java:954) at java.base/java.io.ObjectInputStream.<init>(ObjectInputStream.java:392) at hudson.remoting.ObjectInputStreamEx.<init>(ObjectInputStreamEx.java:50) at hudson.remoting.Command.readFrom(Command.java:141) at hudson.remoting.Command.readFrom(Command.java:127) at hudson.remoting.AbstractSynchronousByteArrayCommandTransport.read(AbstractSynchronousByteArrayCommandTransport.java:35) at hudson.remoting.SynchronousCommandTransport$ReaderThread.run(SynchronousCommandTransport.java:62) Caused: java.io.IOException: Unexpected termination of the channel at hudson.remoting.SynchronousCommandTransport$ReaderThread.run(SynchronousCommandTransport.java:80) Caused: java.io.IOException: Backing channel 'macOS-Silicon' is disconnected. at hudson.remoting.RemoteInvocationHandler.channelOrFail(RemoteInvocationHandler.java:227) at hudson.remoting.RemoteInvocationHandler.invoke(RemoteInvocationHandler.java:306) at jdk.proxy2/jdk.proxy2.$Proxy150.isAlive(Unknown Source) at hudson.Launcher$RemoteLauncher$ProcImpl.isAlive(Launcher.java:1212) at hudson.Launcher$RemoteLauncher$ProcImpl.join(Launcher.java:1204) at hudson.tasks.CommandInterpreter.join(CommandInterpreter.java:195) at hudson.tasks.CommandInterpreter.perform(CommandInterpreter.java:145) at hudson.tasks.CommandInterpreter.perform(CommandInterpreter.java:92) at hudson.tasks.BuildStepMonitor$1.perform(BuildStepMonitor.java:20) at hudson.model.AbstractBuild$AbstractBuildExecution.perform(AbstractBuild.java:818) at hudson.model.Build$BuildExecution.build(Build.java:199) at hudson.model.Build$BuildExecution.doRun(Build.java:164) at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:527) at hudson.model.Run.execute(Run.java:1898) at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:44) at hudson.model.ResourceController.execute(ResourceController.java:101) at hudson.model.Executor.run(Executor.java:445) FATAL: Unable to delete script file /var/folders/mx/mr9ch0gx2qq_tty2dtgrjcn40000gp/T/jenkins6674265857663754180.sh java.io.EOFException at java.base/java.io.ObjectInputStream$PeekInputStream.readFully(ObjectInputStream.java:2915) at java.base/java.io.ObjectInputStream$BlockDataInputStream.readShort(ObjectInputStream.java:3410) at java.base/java.io.ObjectInputStream.readStreamHeader(ObjectInputStream.java:954) at java.base/java.io.ObjectInputStream.<init>(ObjectInputStream.java:392) at hudson.remoting.ObjectInputStreamEx.<init>(ObjectInputStreamEx.java:50) at hudson.remoting.Command.readFrom(Command.java:141) at hudson.remoting.Command.readFrom(Command.java:127) at hudson.remoting.AbstractSynchronousByteArrayCommandTransport.read(AbstractSynchronousByteArrayCommandTransport.java:35) at hudson.remoting.SynchronousCommandTransport$ReaderThread.run(SynchronousCommandTransport.java:62) Caused: java.io.IOException: Unexpected termination of the channel at hudson.remoting.SynchronousCommandTransport$ReaderThread.run(SynchronousCommandTransport.java:80) Caused: hudson.remoting.ChannelClosedException: Channel "hudson.remoting.Channel@50159f85:macOS-Silicon": Remote call on macOS-Silicon failed. The channel is closing down or has closed down at hudson.remoting.Channel.call(Channel.java:1105) at hudson.FilePath.act(FilePath.java:1228) at hudson.FilePath.act(FilePath.java:1217) at hudson.FilePath.delete(FilePath.java:1764) at hudson.tasks.CommandInterpreter.perform(CommandInterpreter.java:163) at hudson.tasks.CommandInterpreter.perform(CommandInterpreter.java:92) at hudson.tasks.BuildStepMonitor$1.perform(BuildStepMonitor.java:20) at hudson.model.AbstractBuild$AbstractBuildExecution.perform(AbstractBuild.java:818) at hudson.model.Build$BuildExecution.build(Build.java:199) at hudson.model.Build$BuildExecution.doRun(Build.java:164) at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:527) at hudson.model.Run.execute(Run.java:1898) at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:44) at hudson.model.ResourceController.execute(ResourceController.java:101) at hudson.model.Executor.run(Executor.java:445) Build step 'Execute shell' marked build as failure FATAL: Channel "hudson.remoting.Channel@50159f85:macOS-Silicon": Remote call on macOS-Silicon failed. The channel is closing down or has closed down java.io.EOFException at java.base/java.io.ObjectInputStream$PeekInputStream.readFully(ObjectInputStream.java:2915) at java.base/java.io.ObjectInputStream$BlockDataInputStream.readShort(ObjectInputStream.java:3410) at java.base/java.io.ObjectInputStream.readStreamHeader(ObjectInputStream.java:954) at java.base/java.io.ObjectInputStream.<init>(ObjectInputStream.java:392) at hudson.remoting.ObjectInputStreamEx.<init>(ObjectInputStreamEx.java:50) at hudson.remoting.Command.readFrom(Command.java:141) at hudson.remoting.Command.readFrom(Command.java:127) at hudson.remoting.AbstractSynchronousByteArrayCommandTransport.read(AbstractSynchronousByteArrayCommandTransport.java:35) at hudson.remoting.SynchronousCommandTransport$ReaderThread.run(SynchronousCommandTransport.java:62) Caused: java.io.IOException: Unexpected termination of the channel at hudson.remoting.SynchronousCommandTransport$ReaderThread.run(SynchronousCommandTransport.java:80) Caused: hudson.remoting.ChannelClosedException: Channel "hudson.remoting.Channel@50159f85:macOS-Silicon": Remote call on macOS-Silicon failed. The channel is closing down or has closed down at hudson.remoting.Channel.call(Channel.java:1105) at hudson.Launcher$RemoteLauncher.kill(Launcher.java:1147) at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:539) at hudson.model.Run.execute(Run.java:1898) at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:44) at hudson.model.ResourceController.execute(ResourceController.java:101) at hudson.model.Executor.run(Executor.java:445) Recording test results Agent went offline during the build ERROR: Connection was broken Build step 'Publish JUnit test result report' marked build as failure Finished: FAILURE